View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9279_low_25 (Length: 364)

Name: NF9279_low_25
Description: NF9279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9279_low_25
NF9279_low_25
[»] chr6 (33 HSPs)
chr6 (21-158)||(14845844-14845981)
chr6 (223-364)||(14846028-14846159)
chr6 (318-364)||(12170620-12170666)
chr6 (318-364)||(546183-546229)
chr6 (210-364)||(14174862-14175009)
chr6 (210-364)||(14179398-14179545)
chr6 (320-364)||(14801979-14802023)
chr6 (210-286)||(32327011-32327084)
chr6 (320-364)||(33053062-33053106)
chr6 (318-364)||(67893-67939)
chr6 (318-364)||(606356-606402)
chr6 (318-364)||(3913466-3913512)
chr6 (318-364)||(20226003-20226049)
chr6 (318-364)||(22119987-22120033)
chr6 (318-364)||(23128770-23128816)
chr6 (318-364)||(29255338-29255384)
chr6 (242-286)||(67821-67865)
chr6 (242-286)||(3913394-3913438)
chr6 (320-364)||(7515096-7515140)
chr6 (242-286)||(21426506-21426550)
chr6 (318-362)||(21426578-21426622)
chr6 (320-364)||(30608409-30608453)
chr6 (320-364)||(30894751-30894795)
chr6 (211-286)||(12170694-12170766)
chr6 (318-364)||(9341543-9341589)
chr6 (254-288)||(29319709-29319743)
chr6 (318-364)||(30776815-30776861)
chr6 (241-286)||(34018786-34018831)
chr6 (242-286)||(606430-606474)
chr6 (242-286)||(9341471-9341515)
chr6 (320-364)||(26588366-26588410)
chr6 (242-286)||(30894824-30894868)
chr6 (318-364)||(32327112-32327155)
[»] chr1 (47 HSPs)
chr1 (210-364)||(34878069-34878216)
chr1 (318-364)||(7836688-7836734)
chr1 (318-364)||(16989525-16989571)
chr1 (318-364)||(44543426-44543472)
chr1 (320-364)||(19596354-19596398)
chr1 (318-364)||(24583300-24583346)
chr1 (318-364)||(48750339-48750385)
chr1 (211-288)||(21687604-21687678)
chr1 (320-364)||(7337557-7337601)
chr1 (320-364)||(14872793-14872837)
chr1 (320-364)||(19061063-19061107)
chr1 (320-364)||(36775604-36775648)
chr1 (242-364)||(4413268-4413386)
chr1 (211-286)||(11462274-11462346)
chr1 (321-364)||(30712196-30712239)
chr1 (318-364)||(3228423-3228469)
chr1 (318-364)||(5983990-5984036)
chr1 (318-364)||(10776353-10776399)
chr1 (318-364)||(23291534-23291580)
chr1 (318-364)||(24583104-24583150)
chr1 (318-364)||(34412984-34413030)
chr1 (318-364)||(35484283-35484329)
chr1 (320-364)||(13144706-13144750)
chr1 (89-129)||(33421987-33422027)
chr1 (320-364)||(47133057-47133101)
chr1 (210-302)||(1742501-1742592)
chr1 (318-364)||(11462374-11462420)
chr1 (318-364)||(14489426-14489472)
chr1 (318-364)||(21687532-21687578)
chr1 (318-364)||(21947510-21947556)
chr1 (318-364)||(32395152-32395198)
chr1 (318-364)||(37720041-37720087)
chr1 (318-364)||(44915793-44915839)
chr1 (318-364)||(51373750-51373796)
chr1 (335-364)||(1742433-1742462)
chr1 (320-364)||(6217717-6217761)
chr1 (242-286)||(10776281-10776325)
chr1 (242-286)||(16989599-16989643)
chr1 (320-356)||(19715769-19715805)
chr1 (242-286)||(23289212-23289256)
chr1 (210-286)||(26535564-26535637)
chr1 (242-286)||(29738484-29738528)
chr1 (320-364)||(31919143-31919187)
chr1 (320-364)||(32679035-32679079)
chr1 (242-286)||(35484211-35484255)
chr1 (320-356)||(40880887-40880923)
chr1 (210-286)||(49504386-49504459)
[»] chr5 (32 HSPs)
chr5 (210-364)||(38007508-38007654)
chr5 (242-364)||(35850949-35851065)
chr5 (318-364)||(8096390-8096436)
chr5 (318-364)||(13007379-13007425)
chr5 (318-364)||(14211377-14211423)
chr5 (318-364)||(24229676-24229722)
chr5 (318-364)||(25980307-25980353)
chr5 (318-364)||(26825580-26825626)
chr5 (318-364)||(38597947-38597993)
chr5 (210-302)||(14726252-14726339)
chr5 (210-364)||(6011929-6012076)
chr5 (210-364)||(9113516-9113663)
chr5 (318-364)||(8088104-8088150)
chr5 (320-364)||(2979200-2979244)
chr5 (318-362)||(11867801-11867845)
chr5 (320-364)||(11976829-11976873)
chr5 (320-364)||(13422083-13422127)
chr5 (242-286)||(25980381-25980425)
chr5 (320-364)||(31391647-31391691)
chr5 (242-286)||(34945617-34945661)
chr5 (211-286)||(24229576-24229648)
chr5 (322-364)||(14082292-14082334)
chr5 (318-364)||(28540798-28540844)
chr5 (320-362)||(31280881-31280923)
chr5 (318-364)||(34945543-34945589)
chr5 (319-360)||(38961581-38961622)
chr5 (320-364)||(7036369-7036413)
chr5 (320-364)||(7886813-7886857)
chr5 (210-286)||(13007453-13007526)
chr5 (320-364)||(14726355-14726399)
chr5 (242-286)||(26825654-26825698)
chr5 (242-286)||(38598021-38598065)
[»] chr7 (36 HSPs)
chr7 (318-364)||(45349691-45349737)
chr7 (210-364)||(39171377-39171528)
chr7 (211-364)||(48061575-48061721)
chr7 (211-364)||(12141099-12141246)
chr7 (318-364)||(19297023-19297069)
chr7 (318-364)||(37837350-37837396)
chr7 (210-286)||(28044547-28044620)
chr7 (320-364)||(38798934-38798978)
chr7 (318-358)||(39328685-39328725)
chr7 (210-286)||(37837250-37837322)
chr7 (318-364)||(8001438-8001484)
chr7 (318-364)||(35133100-35133146)
chr7 (318-364)||(42978763-42978809)
chr7 (318-364)||(47590464-47590510)
chr7 (318-364)||(48316704-48316750)
chr7 (318-364)||(48930860-48930906)
chr7 (323-364)||(25287083-25287124)
chr7 (241-286)||(40993384-40993429)
chr7 (320-364)||(13796823-13796867)
chr7 (322-362)||(27341705-27341745)
chr7 (320-364)||(28407812-28407856)
chr7 (320-364)||(34899501-34899545)
chr7 (320-363)||(5348486-5348529)
chr7 (325-364)||(9450036-9450075)
chr7 (322-364)||(17773421-17773463)
chr7 (318-364)||(22743097-22743143)
chr7 (210-286)||(24770471-24770553)
chr7 (318-364)||(40993310-40993356)
chr7 (318-364)||(46700188-46700234)
chr7 (210-302)||(9977001-9977088)
chr7 (241-286)||(45349618-45349663)
chr7 (320-356)||(433565-433601)
chr7 (242-286)||(8001366-8001410)
chr7 (322-362)||(11343964-11344004)
chr7 (320-364)||(28044650-28044694)
chr7 (242-286)||(47590538-47590582)
[»] chr3 (54 HSPs)
chr3 (318-364)||(33580030-33580076)
chr3 (318-364)||(38545949-38545995)
chr3 (213-364)||(45568239-45568383)
chr3 (318-364)||(4711632-4711678)
chr3 (318-364)||(4821956-4822002)
chr3 (318-364)||(7546765-7546811)
chr3 (318-364)||(9998617-9998663)
chr3 (318-364)||(10108386-10108432)
chr3 (318-364)||(10229626-10229672)
chr3 (318-364)||(10233220-10233266)
chr3 (318-364)||(21289706-21289752)
chr3 (318-364)||(21533701-21533747)
chr3 (318-364)||(38860004-38860050)
chr3 (318-364)||(42460899-42460945)
chr3 (318-364)||(48650626-48650672)
chr3 (318-364)||(51303535-51303581)
chr3 (318-364)||(51923877-51923923)
chr3 (318-364)||(53807750-53807796)
chr3 (320-364)||(20987649-20987693)
chr3 (210-286)||(43017112-43017185)
chr3 (210-364)||(47041839-47041986)
chr3 (321-364)||(8914862-8914905)
chr3 (211-286)||(40487549-40487621)
chr3 (318-364)||(628815-628861)
chr3 (318-360)||(6954588-6954630)
chr3 (318-364)||(9797426-9797472)
chr3 (318-364)||(21313186-21313232)
chr3 (318-364)||(21431763-21431809)
chr3 (242-288)||(21533629-21533675)
chr3 (318-364)||(23799802-23799848)
chr3 (318-364)||(27706118-27706164)
chr3 (318-364)||(40487475-40487521)
chr3 (322-364)||(43017038-43017080)
chr3 (323-364)||(19619863-19619904)
chr3 (210-286)||(6954487-6954560)
chr3 (320-364)||(29922207-29922251)
chr3 (320-364)||(29971360-29971404)
chr3 (242-286)||(44959793-44959837)
chr3 (320-364)||(44959867-44959911)
chr3 (320-364)||(50194229-50194273)
chr3 (210-286)||(52922908-52922981)
chr3 (320-364)||(52923011-52923055)
chr3 (242-286)||(54149215-54149259)
chr3 (317-364)||(9173898-9173945)
chr3 (318-364)||(3085193-3085239)
chr3 (318-364)||(12946859-12946905)
chr3 (318-364)||(40556852-40556898)
chr3 (318-364)||(52115913-52115959)
chr3 (210-286)||(9797325-9797398)
chr3 (242-286)||(10229700-10229744)
chr3 (320-364)||(16235576-16235620)
chr3 (320-364)||(27856315-27856359)
chr3 (242-286)||(33580104-33580148)
chr3 (242-286)||(38546023-38546067)
[»] chr2 (47 HSPs)
chr2 (318-364)||(18763629-18763675)
chr2 (318-364)||(37994445-37994491)
chr2 (320-364)||(36692035-36692079)
chr2 (318-364)||(7646639-7646685)
chr2 (318-364)||(43397011-43397057)
chr2 (323-364)||(29279468-29279509)
chr2 (210-363)||(31788618-31788764)
chr2 (320-364)||(9169153-9169197)
chr2 (320-364)||(11985128-11985172)
chr2 (320-364)||(32448511-32448555)
chr2 (321-364)||(33760089-33760132)
chr2 (242-288)||(1415790-1415836)
chr2 (318-364)||(1421837-1421883)
chr2 (318-364)||(3309106-3309152)
chr2 (318-364)||(7677766-7677812)
chr2 (318-364)||(10237109-10237155)
chr2 (318-364)||(12647005-12647051)
chr2 (318-364)||(17249040-17249086)
chr2 (318-364)||(33585628-33585674)
chr2 (210-288)||(33923938-33924013)
chr2 (318-364)||(37876499-37876545)
chr2 (320-364)||(4100497-4100541)
chr2 (210-286)||(4778988-4779061)
chr2 (210-286)||(5427661-5427734)
chr2 (242-286)||(11985054-11985098)
chr2 (316-364)||(23933510-23933558)
chr2 (210-286)||(36942914-36942987)
chr2 (241-288)||(7677693-7677740)
chr2 (318-357)||(19062240-19062279)
chr2 (318-361)||(25508961-25509004)
chr2 (211-286)||(31193129-31193201)
chr2 (318-360)||(1415722-1415764)
chr2 (322-364)||(4041491-4041533)
chr2 (318-364)||(4778914-4778960)
chr2 (318-364)||(12554074-12554120)
chr2 (318-364)||(12677344-12677389)
chr2 (318-364)||(27097300-27097346)
chr2 (318-364)||(33923866-33923912)
chr2 (213-286)||(12677246-12677316)
chr2 (242-302)||(36692095-36692153)
chr2 (320-364)||(4904040-4904084)
chr2 (320-356)||(8806037-8806073)
chr2 (320-364)||(10929826-10929870)
chr2 (320-364)||(16376100-16376144)
chr2 (210-286)||(18763703-18763776)
chr2 (242-286)||(29173538-29173582)
chr2 (318-358)||(35220495-35220535)
[»] scaffold0445 (2 HSPs)
scaffold0445 (320-364)||(1495-1539)
scaffold0445 (242-286)||(1569-1613)
[»] chr8 (43 HSPs)
chr8 (320-364)||(45445703-45445747)
chr8 (318-364)||(10377842-10377888)
chr8 (318-364)||(25190955-25191001)
chr8 (318-364)||(30568211-30568257)
chr8 (318-364)||(31013498-31013544)
chr8 (318-364)||(43833886-43833932)
chr8 (321-364)||(20553134-20553177)
chr8 (318-364)||(7883131-7883177)
chr8 (318-364)||(14585830-14585876)
chr8 (318-364)||(15344461-15344507)
chr8 (318-364)||(15433526-15433572)
chr8 (318-364)||(15524830-15524876)
chr8 (318-364)||(16928647-16928693)
chr8 (318-364)||(18890589-18890635)
chr8 (318-364)||(23230796-23230842)
chr8 (322-364)||(29617168-29617210)
chr8 (318-360)||(37971440-37971482)
chr8 (318-364)||(41896670-41896716)
chr8 (320-364)||(3673594-3673638)
chr8 (210-286)||(7883030-7883103)
chr8 (320-364)||(12184442-12184486)
chr8 (320-364)||(12428870-12428914)
chr8 (242-286)||(16928575-16928619)
chr8 (210-286)||(40618862-40618935)
chr8 (212-288)||(45445602-45445675)
chr8 (321-364)||(14916081-14916124)
chr8 (321-364)||(20559637-20559680)
chr8 (321-364)||(20571199-20571242)
chr8 (318-364)||(1236587-1236633)
chr8 (318-364)||(1239287-1239333)
chr8 (318-364)||(7677173-7677219)
chr8 (318-364)||(9637299-9637345)
chr8 (318-364)||(16247113-16247159)
chr8 (242-299)||(25190883-25190938)
chr8 (322-364)||(28086706-28086748)
chr8 (322-364)||(33214565-33214607)
chr8 (319-364)||(40618964-40619009)
chr8 (320-356)||(2656044-2656080)
chr8 (242-286)||(8412340-8412384)
chr8 (320-356)||(11197057-11197093)
chr8 (242-286)||(30568139-30568183)
chr8 (320-356)||(33896260-33896296)
chr8 (320-356)||(37565753-37565789)
[»] scaffold0884 (2 HSPs)
scaffold0884 (318-364)||(1865-1911)
scaffold0884 (242-286)||(1793-1837)
[»] scaffold0127 (1 HSPs)
scaffold0127 (318-364)||(15643-15689)
[»] scaffold0026 (1 HSPs)
scaffold0026 (318-364)||(71762-71808)
[»] chr4 (38 HSPs)
chr4 (318-364)||(10496506-10496552)
chr4 (318-364)||(35348478-35348524)
chr4 (318-364)||(47320304-47320350)
chr4 (318-362)||(31891179-31891223)
chr4 (320-364)||(36194879-36194923)
chr4 (318-361)||(2520953-2520996)
chr4 (211-286)||(56040438-56040510)
chr4 (318-364)||(6155115-6155161)
chr4 (318-364)||(19853404-19853450)
chr4 (318-364)||(53811199-53811245)
chr4 (210-286)||(19853303-19853376)
chr4 (210-286)||(21686033-21686106)
chr4 (210-282)||(32766763-32766832)
chr4 (320-364)||(48257526-48257570)
chr4 (320-364)||(56040540-56040584)
chr4 (211-286)||(2521024-2521096)
chr4 (321-364)||(9178524-9178567)
chr4 (211-286)||(26633463-26633535)
chr4 (321-364)||(27652114-27652157)
chr4 (318-364)||(11299902-11299948)
chr4 (242-280)||(17949143-17949181)
chr4 (242-280)||(17952995-17953033)
chr4 (318-364)||(18935953-18935999)
chr4 (318-364)||(21686134-21686180)
chr4 (318-364)||(22611354-22611400)
chr4 (318-364)||(29960841-29960887)
chr4 (318-364)||(32766685-32766731)
chr4 (318-364)||(37465653-37465699)
chr4 (318-364)||(45418683-45418729)
chr4 (318-364)||(53444289-53444335)
chr4 (323-364)||(29120276-29120317)
chr4 (318-359)||(56156534-56156575)
chr4 (242-286)||(13634360-13634404)
chr4 (320-364)||(22806707-22806751)
chr4 (242-286)||(24098889-24098933)
chr4 (320-364)||(24098962-24099005)
chr4 (242-286)||(48257452-48257496)
chr4 (320-364)||(52944482-52944526)
[»] scaffold0128 (1 HSPs)
scaffold0128 (319-364)||(36976-37021)
[»] scaffold0049 (1 HSPs)
scaffold0049 (318-362)||(71192-71236)
[»] scaffold0219 (1 HSPs)
scaffold0219 (318-364)||(14763-14809)
[»] scaffold0136 (2 HSPs)
scaffold0136 (318-364)||(9934-9980)
scaffold0136 (242-286)||(9862-9906)
[»] scaffold0088 (1 HSPs)
scaffold0088 (318-364)||(50927-50973)
[»] scaffold0009 (1 HSPs)
scaffold0009 (320-364)||(57982-58026)
[»] scaffold0050 (1 HSPs)
scaffold0050 (321-364)||(65937-65980)
[»] scaffold0603 (1 HSPs)
scaffold0603 (318-364)||(7866-7912)
[»] scaffold0039 (1 HSPs)
scaffold0039 (318-364)||(93258-93304)


Alignment Details
Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 14845844 - 14845981
Alignment:
Q  21 gaggttattcttggtttgatcgtcaatctcgcagccaaatccaaactctttcttgaaacaatacacactgtaaatcttcttcttagcttccgccacactg 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14845844 gaggttattcttggtttgctcgtcaatctcgcagccaaatccaaactctttcttgaaacaatacacactgtaaatcttcttcttagcttccaccacactg 14845943  T
Q  121 aaaaccaaaattagggcttcaaaacatacatttctaag 158  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14845944 aaaaccaaaattagggcttcaaaacatacatttctaag 14845981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 14846028 - 14846159
Alignment:
Q  223 catattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcacccaagtttaaccca 322  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||  ||||||||||||| ||||||||||| ||||||    
T  14846028 catattcattaattcaaataaatcgatagattatatca--------catcgctaaaaacgtaaaag--gtgaatctgtgacagcacccaagttaaaccca 14846117  T
Q  323 agttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14846118 agttaatagcataaaacagcaaaatgcctacaaataatatga 14846159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 12170666 - 12170620
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  12170666 acccaagttaatagcatacaacagcaaaatgcctacaaataatatga 12170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 546229 - 546183
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  546229 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 546183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 14174862 - 14175009
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    ||||| |||| ||||| ||||||||| ||||||||||||||  ||||||||||| ||    ||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaat----cgatatattacatcagatacaaacattgctaaaaacgtaaa--aggtgaatctgcgaacaaac 14174955  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||    | || |||||||| |||||||||| | ||||||||||||||||||||||    
T  14174956 tca--catcactcaagttaacagcataaaacggaaaaatgcctacaaataatatga 14175009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 14179398 - 14179545
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    ||||| |||| ||||| ||||||||| ||||||||||||||  ||||||||||| ||    ||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaat----cgatatattacatcagatacaaacattgctaaaaacgtaaa--aggtgaatctgcgaacaaac 14179491  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||    | || |||||||| |||||||||| | ||||||||||||||||||||||    
T  14179492 tca--catcactcaagttaacagcataaaacggaaaaatgcctacaaataatatga 14179545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 14802023 - 14801979
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  14802023 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 14801979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 32327011 - 32327084
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  32327011 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 32327084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 33053062 - 33053106
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  33053062 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 33053106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 67893 - 67939
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  67893 acccaagttaatagcatacaacggcaaaatgcctataaataatatga 67939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 606402 - 606356
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  606402 acccaagttaatagcatacaatggcaaaatgcctacaaataatatga 606356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 3913466 - 3913512
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  3913466 acccaagttaatagcatacaatggcaaaatgcctacaaataatatga 3913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 20226049 - 20226003
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  20226049 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 20226003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 22120033 - 22119987
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  22120033 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 22119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 23128816 - 23128770
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  23128816 acccaaattaatagcatacaacggcaaaatgcctacaaataatatga 23128770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 29255338 - 29255384
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||    
T  29255338 acccaagttaatagcatacaacagtgaaatgcctacaaataatatga 29255384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 67821 - 67865
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  67821 aaatcgatagagtatatcagatacaaacattgctaaaaacgtaaa 67865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 3913394 - 3913438
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  3913394 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 3913438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 7515096 - 7515140
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||    
T  7515096 ccaagttaatagcatacagcagaaaaatgcctacaaataatatga 7515140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 21426506 - 21426550
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  21426506 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 21426550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 21426578 - 21426622
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||    
T  21426578 acccaagttaatagcatacaacggcaaaatgtctacaaataatat 21426622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 30608409 - 30608453
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||    
T  30608409 ccaagttaatagcatacaacggtaaaatgcctacaaataatatga 30608453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 30894795 - 30894751
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||    
T  30894795 ccaagttgatagcatacaacagcaaaatgactacaaataatatga 30894751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 12170766 - 12170694
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||||||||||| |||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaatgtaaa 12170694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 9341543 - 9341589
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  ||||||||||||||| |||||||    
T  9341543 acccaagttaatagcatacaacgacaaaatgcctacaaacaatatga 9341589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 288
Target Start/End: Original strand, 29319709 - 29319743
Alignment:
Q  254 tatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    |||||||| ||||||||||||||||||||||||||    
T  29319709 tatatcagatacaaacatcgctaaaaacgtaaaag 29319743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 30776861 - 30776815
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||   || ||||||||||||||||||||||||    
T  30776861 acccaagttaatagcattccacggcaaaatgcctacaaataatatga 30776815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 34018831 - 34018786
Alignment:
Q  241 taaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||| |||||| ||||| || ||||||||||||||||||||||||    
T  34018831 taaattgatagagtatattagatacaaacatcgctaaaaacgtaaa 34018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 606474 - 606430
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||| ||||||||||||    
T  606474 aaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaa 606430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 9341471 - 9341515
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||    
T  9341471 aaatcgatagagtacatcagatacaaacattgctaaaaacgtaaa 9341515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 26588366 - 26588410
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||| |||||| |||||||||||| ||| |||||||||||    
T  26588366 ccaagttaagagcatacaacagcaaaatgtctaaaaataatatga 26588410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 30894868 - 30894824
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||| || || ||||| ||||||||||||||||||||||||    
T  30894868 aaatcgatggaatacatcagatacaaacatcgctaaaaacgtaaa 30894824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 32327112 - 32327155
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||   | ||||||||||||||||||||||||    
T  32327112 acccaagttaatagcata---cggcaaaatgcctacaaataatatga 32327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 34878069 - 34878216
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    |||||||||| ||||| |  |||||||||||||||||||||||  ||||||||||||    ||    
T  34878069 gacaaaaacaaaacgatattcattcattcaaat----cgatagattacatcagatggaaacatcgctaaaaacgtaaaag--gtgaatctgtgaacaaac 34878162  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||      |||||||||||||||||||||| ||||||||||||||||||||||||    
T  34878163 tcacaac--acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 34878216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 7836688 - 7836734
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7836688 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 7836734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 16989571 - 16989525
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  16989571 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 16989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 44543472 - 44543426
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  44543472 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 44543426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 19596354 - 19596398
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  19596354 ccaagttaatagcataaaacggcaaaatgcctacaaataatatga 19596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 24583346 - 24583300
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  24583346 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 24583300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 48750385 - 48750339
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  48750385 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 48750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 21687678 - 21687604
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    ||||||||||||| ||||||||| ||||||||    |||||||||| ||||| |||||||||||||| |||||||||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaat----cgatagattacatcagatacaaacatcgctagaaacgtaaaag 21687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 7337557 - 7337601
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  7337557 ccaagttaatagcatgcaacagcaaaatgcctacaaataatatga 7337601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 14872837 - 14872793
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  14872837 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 14872793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 19061107 - 19061063
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  19061107 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 19061063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 36775604 - 36775648
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  36775604 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 36775648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 364
Target Start/End: Complemental strand, 4413386 - 4413268
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcacccaagttta----acccaagttaatagcataaa 337  Q
    ||||||||||| || ||||| |||||||||||||||||||||||| ||  |||||||||||       ||| || |    || ||| ||||||||||| |    
T  4413386 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagga--tgaatctgtga------acaaattcacagcactcaatttaatagcataca 4413295  T
Q  338 acagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||||||||    
T  4413294 acagcaaaatgcctacaaataatatga 4413268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 11462274 - 11462346
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 11462346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 30712196 - 30712239
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  30712196 caagttaatagcatagaacaacaaaatgcctacaaataatatga 30712239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 3228469 - 3228423
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  3228469 acccaagttaataacatataacggcaaaatgcctacaaataatatga 3228423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 5984036 - 5983990
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  5984036 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 5983990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 10776353 - 10776399
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  10776353 acccaagttaatagaatacaacagcaaaatgcctacaaataaaatga 10776399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 23291534 - 23291580
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  23291534 acccaagttaatagcataaaacggcaaaatacctccaaataatatga 23291580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 24583150 - 24583104
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  24583150 acccaagttaatatcatacaacggcaaaatgcctacaaataatatga 24583104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 34412984 - 34413030
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  34412984 acccaagttaataacatacaaccgcaaaatgcctacaaataatatga 34413030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 35484283 - 35484329
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  35484283 acccaagttaatagcatacaacggcaaaatgcttacaaataatatga 35484329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 13144706 - 13144750
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||  |||||||||||||||||| |||||    
T  13144706 ccaagttaatagcataaaatggcaaaatgcctacaaatattatga 13144750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 33422027 - 33421987
Alignment:
Q  89 tgtaaatcttcttcttagcttccgccacactgaaaaccaaa 129  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  33422027 tgtaaatcttcttcttagcttcctcctcactgaaaaccaaa 33421987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 47133101 - 47133057
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||    
T  47133101 ccaagttaatagcatataacggcaaaatgcctacaaaaaatatga 47133057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 302
Target Start/End: Complemental strand, 1742592 - 1742501
Alignment:
Q  210 gacaaaaacaaaaca-tattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtga 302  Q
    ||||||||||||||| |||| ||| |||||   |||||| || |||| ||||| || |||||||||||||||||||||   |||||||||||||    
T  1742592 gacaaaaacaaaacaatatttattcattcattcaaatcgctatattacatcagatataaacatcgctaaaaacgtaaa--gggtgaatctgtga 1742501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 11462374 - 11462420
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||||    
T  11462374 acccaagttaatagcatacaacgacaaaattcctacaaataatatga 11462420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 14489472 - 14489426
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| |||| |||||| ||||||||||||||||    
T  14489472 acccaagttaataacatacaacaacaaaatacctacaaataatatga 14489426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 21687578 - 21687532
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| |||||||||||||||   ||||||||||||||||||||||    
T  21687578 acccaaattaatagcataaaacgagaaaatgcctacaaataatatga 21687532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 21947510 - 21947556
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||  ||| ||| ||||||||||||||||||||||||    
T  21947510 acccaagttaataaaatacaacggcaaaatgcctacaaataatatga 21947556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 32395198 - 32395152
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| | | |||||||||||| |||||||||||    
T  32395198 acccaagttaatagcatacagcggcaaaatgcctataaataatatga 32395152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 37720041 - 37720087
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||   |||| ||||||||||||||||||||||    
T  37720041 acccaagttaatagcattccacagaaaaatgcctacaaataatatga 37720087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 44915839 - 44915793
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||  |||||||| ||| ||||||||||||||||||||||||    
T  44915839 acccaagtcgatagcatacaacggcaaaatgcctacaaataatatga 44915793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 51373750 - 51373796
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||||    
T  51373750 acccaagttaatagcatacgacgacaaaatgcctacaaataatatga 51373796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 364
Target Start/End: Complemental strand, 1742462 - 1742433
Alignment:
Q  335 aaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||||||||||||||    
T  1742462 aaaacagcaaaatgcctacaaataatatga 1742433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 6217717 - 6217761
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||||    
T  6217717 ccaagttaatagcatacaacggtaaaatacctacaaataatatga 6217761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 10776281 - 10776325
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||| |||||| |||||||| | ||||||||||||||||||||||    
T  10776281 aaattgatagagtatatcagatgcaaacatcgctaaaaacgtaaa 10776325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 16989643 - 16989599
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||  |||||||||| |||||||||||||    
T  16989643 aaatcgatagattacatcatatacaaacatcactaaaaacgtaaa 16989599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 19715769 - 19715805
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  19715769 ccaagttaatagcatataacagcataatgcctacaaa 19715805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 23289212 - 23289256
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||  |||||||||||||||| |||||||    
T  23289212 aaatcgatagattacatcatatacaaacatcgctaaatacgtaaa 23289256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 26535637 - 26535564
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||     |||||| || ||||| ||||||||| ||||||||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaatt----gatagagtacatcagatacaaacatagctaaaaacgtaaa 26535564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 29738484 - 29738528
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||    
T  29738484 aaatcgatagagtacatcagatacaaacatcactaaaaacgtaaa 29738528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 31919187 - 31919143
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  ||||||| |||||||||||||||    
T  31919187 ccaagttaatagcatacaacgacaaaatgtctacaaataatatga 31919143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 32679035 - 32679079
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||| ||||| ||| |||||||||||||||| |||||||    
T  32679035 ccaagttaatggcatataacggcaaaatgcctacaaaaaatatga 32679079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 35484211 - 35484255
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| |||||||||||||||||| |||||    
T  35484211 aaatcgatagagtacatcagatacaaacatcgctaaaaatgtaaa 35484255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 40880887 - 40880923
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40880887 ccaagttaatagcatataacagcataatgcctacaaa 40880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 49504386 - 49504459
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || || || ||||||||||| ||||||||||||    
T  49504386 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacataagatacaaacatcgttaaaaacgtaaa 49504459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 364
Target Start/End: Complemental strand, 38007654 - 38007508
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    |||||||||| ||||| ||||||||||||||||||||||||  |||||||| |||||    ||    
T  38007654 gacaaaaacaaaacgatattcattcattcaaat----cgatagattacatcagatacaaacatcgctaaaaacgtaaa--aggtgaatatgtgaacaaac 38007561  T
Q  309 cca-agtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     || ||    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  38007560 tcacag---cacccaagttaatagcataaaa-ggcaaaatgcctacaaataatatga 38007508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 364
Target Start/End: Complemental strand, 35851065 - 35850949
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcacccaagtttaacccaagttaatagcataaaacag 341  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| |||||    || ||      |||||||||||||||||||||| |    
T  35851065 aaatcaatagattatatcagatacaaacatcgctaaaaacgtaaa--aggtgaatttgtgaacaaactca----gcacccaagttaatagcataaaacgg 35850972  T
Q  342 caaaatgcctacaaataatatga 364  Q
    |||| ||||| ||||||||||||    
T  35850971 caaagtgcctgcaaataatatga 35850949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 8096390 - 8096436
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  8096390 acccaagttaatagcataaaatggcaaaatgcctacaaataatatga 8096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 13007425 - 13007379
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13007425 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 13007379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 14211423 - 14211377
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14211423 acccaagttaatagcatacaacagaaaaatgcctacaaataatatga 14211377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 24229676 - 24229722
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  24229676 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 24229722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 25980353 - 25980307
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  25980353 acccaagttaatagcatataacggcaaaatgcctacaaataatatga 25980307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 26825626 - 26825580
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  26825626 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 26825580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 38597993 - 38597947
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38597993 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 38597947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 14726252 - 14726339
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtga 302  Q
    |||||||||||||| ||||||||| ||||||||    |||||||||| ||||| |||||||||| |||||||||||||   |||||||||||||    
T  14726252 gacaaaaacaaaacgatattcattcattcaaat----cgatagattacatcagatacaaacatcactaaaaacgtaaa--gggtgaatctgtga 14726339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 6011929 - 6012076
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||| |||||||||||| |  ||||||||| ||    ||    
T  6011929 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgttaaaaacgtaaagg--gtgaatctgcgaacaaac 6012022  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||  |   |||||||||||||||||||||| | | ||||||||||||||||||||    
T  6012023 tcacatc--acccaagttaatagcataaaacggtagaatgcctacaaataatatga 6012076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 9113516 - 9113663
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||||||||||||||||| |  ||||||||| ||    ||    
T  9113516 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaagg--gtgaatctgcgaacaaac 9113609  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||      |||||||||||||||||| ||| | ||||||||||||||||||||||    
T  9113610 tcagaac--acccaagttaatagcatacaacggaaaaatgcctacaaataatatga 9113663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 8088104 - 8088150
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  8088104 acccaagttaatagcatacaaaggcaaaatgcctacaaataatatga 8088150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 2979200 - 2979244
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||    
T  2979200 ccaagttaatagcatacaacggcacaatgcctacaaataatatga 2979244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 11867845 - 11867801
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||    
T  11867845 acccaaattaatagcatacaacaacaaaatgcctacaaataatat 11867801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 11976829 - 11976873
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  11976829 ccaagttaataacataaaacgggaaaatgcctacaaataatatga 11976873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 13422127 - 13422083
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||| | |||||||||||| |||||||||    
T  13422127 ccaagttaatagcataaaacggaaaaatgcctacatataatatga 13422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 25980425 - 25980381
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  25980425 aaatcgatagagtatatcagatgcaaacatcgctaaaaacgtaaa 25980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 31391647 - 31391691
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||    
T  31391647 ccaagttaatagcatacaacagaaaaatgcctacatataatatga 31391691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 34945661 - 34945617
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  34945661 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 34945617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 24229576 - 24229648
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| || |||||||||||||||||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatataaacatcgctaaaaacgtaaa 24229648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 14082292 - 14082334
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| |||  |||||||||||||||||||||||    
T  14082292 aagttaatagcatacaacgacaaaatgcctacaaataatatga 14082334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 28540798 - 28540844
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| | |||||| |||||||||||||||    
T  28540798 acccaagttaatagcatacaacggaaaaatgtctacaaataatatga 28540844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 31280923 - 31280881
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    ||||||||||||||||||||   ||||||||||||||||||||    
T  31280923 ccaagttaatagcataaaacgataaaatgcctacaaataatat 31280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 34945589 - 34945543
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  ||||||||||| |||||||||||    
T  34945589 acccaagttaatagcatacaacgacaaaatgcctataaataatatga 34945543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 38961622 - 38961581
Alignment:
Q  319 cccaagttaatagcataaaacagcaaaatgcctacaaataat 360  Q
    |||||||||||| ||||||||| ||||||||||| |||||||    
T  38961622 cccaagttaataacataaaacaacaaaatgcctataaataat 38961581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 7036413 - 7036369
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||    
T  7036413 ccaatttaatagcatacaacagcaaaattcctacaaacaatatga 7036369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 7886813 - 7886857
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||    
T  7886813 ccaagttaatagcatataacagaataatgcctacaaaaaatatga 7886857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 13007526 - 13007453
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||     |||||| || ||||  ||||||||||||||||||||||||    
T  13007526 gacaaaaacaaaacgatattcattcattcaaatt----gatagagtacatcaaatacaaacatcgctaaaaacgtaaa 13007453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 14726355 - 14726399
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||  |||||||  |||||||||||||||||||||||    
T  14726355 ccaagttaatattataaaacgacaaaatgcctacaaataatatga 14726399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 26825698 - 26825654
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||    
T  26825698 aaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaa 26825654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 38598065 - 38598021
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||| |||||| || ||||| ||||||||||||||||||||||||    
T  38598065 aaattgatagagtacatcagatacaaacatcgctaaaaacgtaaa 38598021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 45349691 - 45349737
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45349691 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 45349737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 39171377 - 39171528
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||| ||| |||||   ||||||||||| || ||||| |||||||||||||||||||||||| |  |||||||||  |    ||    
T  39171377 gacaaaaacaaaacgatatttatttattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagg--gtgaatctgcaaacaaac 39171474  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||  |   |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  39171475 tca--tagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatga 39171528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 364
Target Start/End: Complemental strand, 48061721 - 48061575
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcacc 309  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||| ||||||||||||| |  ||||||||| ||    ||     
T  48061721 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcaggtacaaacatctctaaaaacgtaaagg--gtgaatctgcgaacaaact 48061628  T
Q  310 caagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||  |   |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  48061627 ca--taacacccaagttaatagcatacaacggcaaaatgcctacaaataatatga 48061575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 364
Target Start/End: Original strand, 12141099 - 12141246
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcacc 309  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||  |||||||| || ||    ||     
T  12141099 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa--aggtgaatatgcgaacaaact 12141192  T
Q  310 caagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    | |    ||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  12141193 c-acaacaacccaagttaatagcatacaacggcaaaatgcatacaaataatatga 12141246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 19297069 - 19297023
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  19297069 acccaaattaatagcatataacagcaaaatgcctacaaataatatga 19297023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 37837350 - 37837396
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  37837350 acccaagttaatagcataaaacggcaaaatgcctacaagtaatatga 37837396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 28044547 - 28044620
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  28044547 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 28044620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 38798978 - 38798934
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  38798978 ccaagttaatagcataagacggcaaaatgcctacaaataatatga 38798934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 39328685 - 39328725
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaata 358  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  39328685 acccaagttaatagcataaaacggcaaaatgcctacaaata 39328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 37837250 - 37837322
Alignment:
Q  210 gacaaaaacaaaacatattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||  ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  37837250 gacaaaaacaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 37837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 8001438 - 8001484
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  8001438 acccaagttaatagcatacaacggcaaaatgcctataaataatatga 8001484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 35133146 - 35133100
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  35133146 acccaagttaatagcatacaacggcaaaatgcctagaaataatatga 35133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 42978809 - 42978763
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||    
T  42978809 acccaagttaatagcatacaacggcaaaatgcctacatataatatga 42978763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 47590510 - 47590464
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||    
T  47590510 acccaagttaatagcttacaacggcaaaatgcctacaaataatatga 47590464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 48316704 - 48316750
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  48316704 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 48316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 48930906 - 48930860
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  48930906 acccaagttaatagcatacaacggcaaaatgccaacaaataatatga 48930860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 25287083 - 25287124
Alignment:
Q  323 agttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  25287083 agttaatagcatacaacagcaaaatggctacaaataatatga 25287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 40993429 - 40993384
Alignment:
Q  241 taaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||    
T  40993429 taaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 40993384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 13796823 - 13796867
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  |||||||||||||||||||||||    
T  13796823 ccaagttaatagcatacaacgacaaaatgcctacaaataatatga 13796867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 27341745 - 27341705
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  27341745 aagttaatagcatataacggcaaaatgcctacaaataatat 27341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 28407812 - 28407856
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||    
T  28407812 ccaagttaatagcatacaacggcaaaatgtctacaaataatatga 28407856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 34899501 - 34899545
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||    
T  34899501 ccaagttaatagcatacaacggcaaaatgcatacaaataatatga 34899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 5348486 - 5348529
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatg 363  Q
    |||||||||||||||| ||| | |||||||||||||||||||||    
T  5348486 ccaagttaatagcatacaacggtaaaatgcctacaaataatatg 5348529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 9450036 - 9450075
Alignment:
Q  325 ttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  9450036 ttaatagcatacaacggcaaaatgcctacaaataatatga 9450075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 17773421 - 17773463
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||    
T  17773421 aagttaatagcatacaacagtaaaatgcttacaaataatatga 17773463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 22743143 - 22743097
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| ||||||||||| ||| |||||||||| |||||||||||||    
T  22743143 acccaaattaatagcatacaacggcaaaatgccaacaaataatatga 22743097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 24770553 - 24770471
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaat-----aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||     ||||| ||| |||| ||||| ||||||||||||||| ||||||||    
T  24770553 gacaaaaacaaaacgatattcattcattcaaatcggtcaaatcaataaattacatcagatacaaacatcgctaacaacgtaaa 24770471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 40993356 - 40993310
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| |||  |||||||||||||||||||||||    
T  40993356 acccaagttaataacatacaacgacaaaatgcctacaaataatatga 40993310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 46700234 - 46700188
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  46700234 accctagttaatagcatataacggcaaaatgcctataaataatatga 46700188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 9977001 - 9977088
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtga 302  Q
    |||||||||||||| ||||||||| |||    ||||| |||||| || ||||| ||||||||| ||||||||||||||   |||||||||||||    
T  9977001 gacaaaaacaaaacgatattcattcatt----taaattgatagagtacatcagatacaaacattgctaaaaacgtaaa--gggtgaatctgtga 9977088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 45349618 - 45349663
Alignment:
Q  241 taaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||| || ||||| |||||| |||||||||||||||||    
T  45349618 taaatcgatagagtacatcagatacaaatatcgctaaaaacgtaaa 45349663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 433565 - 433601
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  433565 ccaagttaatagcatataacagcataatgcctacaaa 433601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 8001366 - 8001410
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |  ||||| ||||||||||||||||||||||||    
T  8001366 aaatcgatagagtgcatcagatacaaacatcgctaaaaacgtaaa 8001410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 11344004 - 11343964
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||||||||||| |||| |||||| ||||||||||||||    
T  11344004 aagttaatagcatacaacatcaaaatacctacaaataatat 11343964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 28044650 - 28044694
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||||    
T  28044650 ccaagttaatagcatacaacggcaaaatgtctaaaaataatatga 28044694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 47590582 - 47590538
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |||||||| || |||||||||| ||||||||||    
T  47590582 aaatcgatagagtatatcagatataaacatcgctgaaaacgtaaa 47590538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 33580076 - 33580030
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  33580076 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 33580030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 38545995 - 38545949
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  38545995 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 38545949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 213 - 364
Target Start/End: Original strand, 45568239 - 45568383
Alignment:
Q  213 aaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcaccca 311  Q
    ||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||||||||||||||||| |  ||||||||| ||    || ||    
T  45568239 aaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaagg--gtgaatctgcgaataaactca 45568332  T
Q  312 agtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
      |   |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  45568333 catc--acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 45568383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 4711678 - 4711632
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4711678 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 4711632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 4822002 - 4821956
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  4822002 acccaagttaatagcatataacagcaaaatgcctacaaaaaatatga 4821956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 7546811 - 7546765
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7546811 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 7546765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 9998663 - 9998617
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  9998663 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 9998617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 10108432 - 10108386
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10108432 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 10108386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 10229672 - 10229626
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10229672 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 10229626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 10233266 - 10233220
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10233266 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 10233220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 21289706 - 21289752
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  21289706 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 21289752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 21533701 - 21533747
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  21533701 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 21533747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 38860004 - 38860050
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38860004 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 38860050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 42460945 - 42460899
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  42460945 acccaagttaatagcatacaacaacaaaatgcctacaaataatatga 42460899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 48650626 - 48650672
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  48650626 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 48650672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 51303535 - 51303581
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  51303535 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 51303581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 51923923 - 51923877
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  51923923 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 51923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 53807750 - 53807796
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  53807750 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 53807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 20987649 - 20987693
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  20987649 ccaagttaatagcatacaactgcaaaatgcctacaaataatatga 20987693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 43017185 - 43017112
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  43017185 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 43017112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 364
Target Start/End: Original strand, 47041839 - 47041986
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||  ||||||||| |||||||||    ||||||||| ||||| ||||||||| ||||||||||||||  ||||||||||| ||    ||    
T  47041839 gacaaaaacaaaatgatattcattcattcaaata----gatagattacatcagatacaaacattgctaaaaacgtaaa--aggtgaatctgcgaacaaac 47041932  T
Q  309 ccaagtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
     ||  | | ||| ||||||||||||||||||   |||| |||||||||||||||||    
T  47041933 tca--tatcacctaagttaatagcataaaacgataaaacgcctacaaataatatga 47041986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 8914905 - 8914862
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  8914905 caagttaatagcatacaacggcaaaatgcctacaaataatatga 8914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 40487621 - 40487549
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| |||||||| ||||||||||||||||||| ||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaat----cgatagagtatatcagatacaaacatcgctaaaaacataaa 40487549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 628815 - 628861
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  628815 acccaagttaatagaatacaacggcaaaatgcctacaaataatatga 628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 6954588 - 6954630
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataat 360  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  6954588 acccaagttaatagcatacaacggcaaaatgcctacaaataat 6954630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 9797426 - 9797472
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  9797426 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 9797472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 21313232 - 21313186
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  21313232 acccaagttaatagcatacaacggcaaaatggctacaaataatatga 21313186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 21431809 - 21431763
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  21431809 acccaagttaatatcatacaacggcaaaatgcctacaaataatatga 21431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 21533629 - 21533675
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||    
T  21533629 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaag 21533675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 23799802 - 23799848
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  23799802 acccaagttaataacatacaacggcaaaatgcctacaaataatatga 23799848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 27706118 - 27706164
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  27706118 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 27706164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 40487521 - 40487475
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  40487521 acccaagttaataacatataacggcaaaatgcctacaaataatatga 40487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 43017080 - 43017038
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  43017080 aagttaatagcatacaacggcaaaatgcctacaaataatatga 43017038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 19619904 - 19619863
Alignment:
Q  323 agttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  19619904 agttaatagcatacaacggcaaaatgcctacaaataatatga 19619863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 6954487 - 6954560
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| ||  |||| ||||||||||||||||||||||||    
T  6954487 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacttcagatacaaacatcgctaaaaacgtaaa 6954560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 29922251 - 29922207
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||    
T  29922251 ccaagttaatagcatacaacggcaaaatgcctacaaacaatatga 29922207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 29971404 - 29971360
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||    
T  29971404 ccaagttaatagcatacaacggcaaaatgcctacaaacaatatga 29971360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 44959793 - 44959837
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  44959793 aaatcgatagaatacatcagatacaaacatcgctaaaaacgtaaa 44959837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 44959867 - 44959911
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||    
T  44959867 ccaagttaatagcatacaatggcaaaatgcctacaaataatatga 44959911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 50194229 - 50194273
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||    
T  50194229 ccaagttaatagcatataacggcaaaatgcctacaaaaaatatga 50194273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 52922908 - 52922981
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||  ||||||||||||||||||||||||    
T  52922908 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcaaatacaaacatcgctaaaaacgtaaa 52922981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 52923011 - 52923055
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||    
T  52923011 ccaagttaatagcatacaacggtaaaatgcctacaaataatatga 52923055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 54149259 - 54149215
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  54149259 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 54149215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 9173945 - 9173898
Alignment:
Q  317 aacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||| ||||||||| |||| ||| ||||||||||||||||||||||||    
T  9173945 aacctaagttaataacatacaacggcaaaatgcctacaaataatatga 9173898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 3085193 - 3085239
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||||    
T  3085193 acccaatttaatagcctacaacggcaaaatgcctacaaataatatga 3085239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 12946859 - 12946905
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  |||||||||||||||| |||||||    
T  12946859 acccaagttaatagcatataagggcaaaatgcctacaaaaaatatga 12946905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 40556898 - 40556852
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||  |||||||| ||| ||||||||||||||||||||||||    
T  40556898 acccaagtgcatagcatacaacggcaaaatgcctacaaataatatga 40556852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 52115913 - 52115959
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| |||| ||||||| |||||||||||||||    
T  52115913 acccaagttaataacatataacaacaaaatgactacaaataatatga 52115959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 9797325 - 9797398
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||| | || ||||| ||||||||||||||| ||||||||    
T  9797325 gacaaaaacaaaacgatattcattcattcaaat----cgatatagtacatcagatacaaacatcgctaagaacgtaaa 9797398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 10229744 - 10229700
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||    
T  10229744 aaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaa 10229700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 16235620 - 16235576
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  |||||||||||||| ||||||||    
T  16235620 ccaagttaatagcatacaacgacaaaatgcctacaagtaatatga 16235576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 27856359 - 27856315
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||  ||| | ||||||||||||||||||||||    
T  27856359 ccaagttaatagcatgcaacggaaaaatgcctacaaataatatga 27856315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 33580148 - 33580104
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||  |||||||||| |||||||||||||    
T  33580148 aaatcgatagattacatcaaatacaaacatcactaaaaacgtaaa 33580104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 38546067 - 38546023
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||    
T  38546067 aaatcgatagattacctcagatacaaacatcactaaaaacgtaaa 38546023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 18763675 - 18763629
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  18763675 acccaagttaatagcataaaacggcaaaatgcctacaaataatatga 18763629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 37994491 - 37994445
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  37994491 acccaagttaatagcatataacagcaaaatgcctacaaataatatga 37994445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 36692079 - 36692035
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  36692079 ccaagttaatagcataaaacggcaaaatgcctacaaataatatga 36692035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 7646685 - 7646639
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7646685 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 7646639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 43397011 - 43397057
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43397011 acccaagttaatagcataaaacggcaaaatgcgtacaaataatatga 43397057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 29279468 - 29279509
Alignment:
Q  323 agttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  29279468 agttaatagcataaaacggcaaaatgcctacaaataatatga 29279509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 31788764 - 31788618
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtgacggcac 308  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||   |||||||||| ||    ||    
T  31788764 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa--gggtgaatctgcgaacaaac 31788671  T
Q  309 cca-agtttaacccaagttaatagcataaaacagcaaaatgcctacaaataatatg 363  Q
     || ||    | |||||||||||||||| ||| |||||||||||||||||||||||    
T  31788670 tcacag---catccaagttaatagcatacaacggcaaaatgcctacaaataatatg 31788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 9169153 - 9169197
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  9169153 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 9169197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 11985128 - 11985172
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  11985128 ccaagttaataggatacaacagcaaaatgcctacaaataatatga 11985172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 32448511 - 32448555
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  32448511 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 32448555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 33760089 - 33760132
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  33760089 caagttaatagcttacaacagcaaaatgcctacaaataatatga 33760132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 1415836 - 1415790
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  1415836 aaatcgatagattacatcagatacaaacatcgctaaaaacgttaaag 1415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 1421883 - 1421837
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  1421883 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 1421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 3309152 - 3309106
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  3309152 acccaagttaatagcatacaacggcaaaatgactacaaataatatga 3309106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 7677766 - 7677812
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  7677766 acccaagttaatagcatacaacggcaaaatgcctaaaaataatatga 7677812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 10237109 - 10237155
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  10237109 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 10237155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 12647005 - 12647051
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||    
T  12647005 acccaagttaatagcatctaacagcaaaatgcctacaaaaaatatga 12647051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 17249040 - 17249086
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  17249040 acccaagttaatagcatacaacggcaaaatgtctacaaataatatga 17249086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 33585628 - 33585674
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  33585628 acccaagttaatagcatacaacggcaaaatgcatacaaataatatga 33585674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 33924013 - 33923938
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    |||||||||||||| ||||||||| ||||||||    |||||||||| ||||| |||||| ||||||||||| |||||||    
T  33924013 gacaaaaacaaaacgatattcattcattcaaat----cgatagattacatcagatacaaaaatcgctaaaaaggtaaaag 33923938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 37876499 - 37876545
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||    
T  37876499 acccaagttaatagcatacgacggcaaaatgcctacaaataatatga 37876545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 4100541 - 4100497
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||||    
T  4100541 ccaagttaatatcatacaacggcaaaatgcctacaaataatatga 4100497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 4779061 - 4778988
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||  ||||||||||||||||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaat----cgatagagtacatcaaatacaaacatcgctaaaaacgtaaa 4778988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 5427661 - 5427734
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||| ||||||    
T  5427661 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaagcgtaaa 5427734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 11985054 - 11985098
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  11985054 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 11985098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 23933510 - 23933558
Alignment:
Q  316 taacccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||| || ||| ||||||| ||||||||||||||||    
T  23933510 taacccaagttaatagcttacaacggcaaaattcctacaaataatatga 23933558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 36942914 - 36942987
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| |||||||| |||    ||| || ||||| ||||||||||||||||||||||||    
T  36942914 gacaaaaacaaaacgatattcattcattcaaatcaat----agagtacatcagatacaaacatcgctaaaaacgtaaa 36942987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 7677693 - 7677740
Alignment:
Q  241 taaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    ||||| |||||| |||||||| || |||||||||||||||||||||||    
T  7677693 taaattgatagagtatatcagatataaacatcgctaaaaacgtaaaag 7677740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 19062240 - 19062279
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaat 357  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  19062240 acccaagttaatagcatacaacggcaaaatgcctacaaat 19062279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 25508961 - 25509004
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataata 361  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||    
T  25508961 acccaagttaataacatacaacggcaaaatgcctacaaataata 25509004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 31193129 - 31193201
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||| |||||||||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcactaaaaacgtaaa 31193201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 1415764 - 1415722
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataat 360  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  1415764 acccaagttaatagcattaaacggtaaaatgcctacaaataat 1415722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 4041491 - 4041533
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||  |||||||||||| |||||||||||||||    
T  4041491 aagttaatagcatgcaacagcaaaatggctacaaataatatga 4041533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 4778960 - 4778914
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  4778960 acccaaattaataacatacaacggcaaaatgcctacaaataatatga 4778914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 12554074 - 12554120
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| |||  |||||||||||||||||||||||    
T  12554074 acccaagttaatatcatacaacgacaaaatgcctacaaataatatga 12554120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 12677344 - 12677389
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  12677344 acccaagttaatagcataaaacggaaaaatgcctac-aataatatga 12677389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 27097300 - 27097346
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  27097300 acccaagttaatagtatacaacggcaaaattcctacaaataatatga 27097346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 33923912 - 33923866
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  33923912 acccaagttaatagcataaaacgacaaaacgcctgcaaataatatga 33923866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 12677246 - 12677316
Alignment:
Q  213 aaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| ||||||||| ||||||||    ||| |||||| ||||| ||||||||||||||||||| ||||    
T  12677246 aaaaacaaaacgatattcattcattcaaat----cgacagattacatcagatacaaacatcgctaaaaacataaa 12677316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 36692153 - 36692095
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctgtga 302  Q
    ||||||||||| || ||||| ||||||||||||||| ||||||||   |||||||||||||    
T  36692153 aaatcgatagagtacatcagatacaaacatcgctaagaacgtaaa--gggtgaatctgtga 36692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 4904040 - 4904084
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  ||||||| |||||||||||||||    
T  4904040 ccaagttaatagcatacaacgacaaaatgtctacaaataatatga 4904084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 8806073 - 8806037
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  8806073 ccaagttaatagcatataacggcaaaatgcctacaaa 8806037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 10929870 - 10929826
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||    
T  10929870 ccaagttaatagcattcaacaacaaaatgcctataaataatatga 10929826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 16376144 - 16376100
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||| ||||| |||| ||||||| |||||||||||||||    
T  16376144 ccaagttaatcgcatacaacaccaaaatgactacaaataatatga 16376100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 18763776 - 18763703
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| |||||||| |||    ||| || ||||| |||||| |||||||||||||||||    
T  18763776 gacaaaaacaaaacgatattcattcattcaaatcaat----agagtacatcagatacaaatatcgctaaaaacgtaaa 18763703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 29173538 - 29173582
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  29173538 aaattgattgattacatcagatacaaacatcgctaaaaacgtaaa 29173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 35220535 - 35220495
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaata 358  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  35220535 acccaagttaatagcatacaacgacaaaatgcctacaaata 35220495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 1539 - 1495
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  1539 ccaagttaatagcataaaacggcaaaatgcctacaaataatatga 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 1613 - 1569
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||| |||||| || ||||| ||||||||||||||||||||||||    
T  1613 aaattgatagagtacatcagatacaaacatcgctaaaaacgtaaa 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 45445703 - 45445747
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  45445703 ccaagttaatagcataaaacaacaaaatgcctacaaataatatga 45445747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 10377888 - 10377842
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  10377888 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 10377842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 25190955 - 25191001
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  25190955 acccaagttaatagcataaaatagaaaaatgcctacaaataatatga 25191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 30568211 - 30568257
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30568211 acccaagttaatagcataaaacggcaaaatgcctacaaataacatga 30568257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 31013498 - 31013544
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  31013498 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 31013544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 43833886 - 43833932
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  43833886 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 43833932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 20553134 - 20553177
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  20553134 caagttaatagcatacaacggcaaaatgcctacaaataatatga 20553177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 7883131 - 7883177
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  7883131 acccaagttaataggatacaacggcaaaatgcctacaaataatatga 7883177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 14585876 - 14585830
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  14585876 acccaagttaatagcatacaacggcaaaacgcctacaaataatatga 14585830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 15344507 - 15344461
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  15344507 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 15344461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 15433572 - 15433526
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  15433572 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 15433526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 15524876 - 15524830
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  15524876 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 15524830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 16928647 - 16928693
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  16928647 acccaagttaatagcatacaatggcaaaatgcctacaaataatatga 16928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 18890589 - 18890635
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  18890589 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 18890635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 23230842 - 23230796
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  23230842 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 23230796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 29617168 - 29617210
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  29617168 aagttaatagcatacaacaacaaaatgcctacaaataatatga 29617210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 37971482 - 37971440
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataat 360  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  37971482 acccaagttaatagcatacaacggcaaaatgcctacaaataat 37971440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 41896716 - 41896670
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  41896716 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 41896670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 3673638 - 3673594
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||    
T  3673638 ccaagttaataggatacaacggcaaaatgcctacaaataatatga 3673594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 7883030 - 7883103
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| |||||||| |||    ||| || ||||| ||||||||||||||||||||||||    
T  7883030 gacaaaaacaaaacgatattcattcattcaaatcaat----agagtacatcagatacaaacatcgctaaaaacgtaaa 7883103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 12184486 - 12184442
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||    
T  12184486 ccaagtcaatagcatacaacagcaaaatacctacaaataatatga 12184442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 12428914 - 12428870
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||    
T  12428914 ccaagtcaatagcatacaacagcaaaatacctacaaataatatga 12428870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 16928575 - 16928619
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  16928575 aaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaa 16928619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 40618862 - 40618935
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||     |||||| || ||||| ||||||||||||||||||||||||    
T  40618862 gacaaaaacaaaacgatattcattcattcaaatt----gatagaatacatcagatacaaacatcgctaaaaacgtaaa 40618935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 45445602 - 45445675
Alignment:
Q  212 caaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaag 288  Q
    |||||||||||| ||||||||| ||||||||    |||| ||||| ||||| ||||||||||| ||||||||||||||    
T  45445602 caaaaacaaaacgatattcattcattcaaat----cgatggattacatcagatacaaacatcgttaaaaacgtaaaag 45445675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 14916081 - 14916124
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||    
T  14916081 caagttaatagcatacaactgcaaaatgcctacaaacaatatga 14916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 20559637 - 20559680
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||    
T  20559637 caagttaatagcatacaacggcaaaatgcccacaaataatatga 20559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 20571199 - 20571242
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||    
T  20571199 caagttaatagcatacaacggcaaaatgcccacaaataatatga 20571242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 1236587 - 1236633
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||||    
T  1236587 acccaagttaatagcatacaacggcaaaatgcctaaaaatagtatga 1236633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 1239287 - 1239333
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  ||||||||||||||||| |||||    
T  1239287 acccaagttaatagcatacaacgtcaaaatgcctacaaatagtatga 1239333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 7677173 - 7677219
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||| ||||||||| ||||||||||||||    
T  7677173 acccaagttaataacatacaacggcaaaatgcttacaaataatatga 7677219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 9637299 - 9637345
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  ||||||||||| |||||||||||    
T  9637299 acccaagttaatagcatacaacgacaaaatgcctaaaaataatatga 9637345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 16247113 - 16247159
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||| ||||||||||||| ||| ||||||||||| ||||||||||||    
T  16247113 acccgagttaatagcatacaacggcaaaatgccttcaaataatatga 16247159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 25190883 - 25190938
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaaagaggtgaatctg 299  Q
    |||||||||||||| ||||| ||||||||| ||||||| ||||||  |||||||||||    
T  25190883 aaatcgatagattacatcagatacaaacattgctaaaatcgtaaa--aggtgaatctg 25190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 28086706 - 28086748
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||| |||  |||||||||||||||||||||||    
T  28086706 aagttaatagcatacaacgacaaaatgcctacaaataatatga 28086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 364
Target Start/End: Original strand, 33214565 - 33214607
Alignment:
Q  322 aagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||||||| ||| |||||||||||    
T  33214565 aagttaatagcataaaacggcaaaatgtctaaaaataatatga 33214607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 40618964 - 40619009
Alignment:
Q  319 cccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||| ||| ||||||||| |||| |||||||||    
T  40618964 cccaagttaatagcatacaacggcaaaatgcatacacataatatga 40619009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 2656080 - 2656044
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  2656080 ccaagttaatagcatataacagcataatgcctacaaa 2656044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 8412340 - 8412384
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  8412340 aaatcaatagattaaatcagatacaaacatcgctaaaaacataaa 8412384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 11197093 - 11197057
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  11197093 ccaagttaatagcatataacagcataatgcctacaaa 11197057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 30568139 - 30568183
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||| ||||||||| ||||  ||||||||||||||||||||||||    
T  30568139 aaattgatagattacatcatatacaaacatcgctaaaaacgtaaa 30568183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 33896296 - 33896260
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  33896296 ccaagttaatagcatataacagcataatgcctacaaa 33896260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 37565753 - 37565789
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaa 356  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  37565753 ccaagttaatagcatataacagcataatgcctacaaa 37565789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 1865 - 1911
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  1865 acccaagttaataacatacaacagcaaaatgcctacaaataatatga 1911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 1793 - 1837
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| |  ||||| ||||||||||||||||||||||||    
T  1793 aaatcgatagaatgcatcaggtacaaacatcgctaaaaacgtaaa 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 15689 - 15643
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15689 acccaagttaatagcatataacggcaaaatgcctacaaataatatga 15643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 71762 - 71808
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  71762 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 71808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 10496552 - 10496506
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  10496552 acccaagttaatagcatacgacagcaaaatgcctacaaataatatga 10496506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 35348524 - 35348478
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  35348524 acccaagttaatagcataaaatggcaaaatgcctacaaataatatga 35348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 47320304 - 47320350
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  47320304 acccaagttaatagcatacaacggcaaaatgcctacaaataatatga 47320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 31891179 - 31891223
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  31891179 acccaagttaatagcatacaacggcaaaatgcctacaaataatat 31891223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 36194923 - 36194879
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  36194923 ccaagttaatagcatacaacggcaaaatgcctacaaataatatga 36194879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 2520996 - 2520953
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataata 361  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  2520996 acccaagttaatagcatacaacggcaaaatgcctacaaataata 2520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 56040438 - 56040510
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacgtaaa 56040510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 6155115 - 6155161
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  6155115 acccaagttaatagcatacaacgacaaaatgcctacaaataatatga 6155161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 19853404 - 19853450
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  19853404 acccaagttaatagcatacaacggcaaaatgcctagaaataatatga 19853450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 53811245 - 53811199
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  53811245 acccaagttaatagcatacaacgccaaaatgcctacaaataatatga 53811199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 19853303 - 19853376
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| ||||||||||| ||||||||||||    
T  19853303 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgttaaaaacgtaaa 19853376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 21686033 - 21686106
Alignment:
Q  210 gacaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    |||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||||||| |||||||||    
T  21686033 gacaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctacaaacgtaaa 21686106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 32766832 - 32766763
Alignment:
Q  210 gacaaaaacaaaaca-tattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacg 282  Q
    ||||||||||||||| |||||||| ||||||||    ||||||| || ||||| ||||||||||||||||||||    
T  32766832 gacaaaaacaaaacaatattcattcattcaaat----cgatagagtacatcagatacaaacatcgctaaaaacg 32766763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 48257526 - 48257570
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  48257526 ccaagttaatagcatacaacggcaaaatacctacaaataatatga 48257570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 56040540 - 56040584
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  |||||||||||||||||||||||    
T  56040540 ccaagttaatagcatacaacgacaaaatgcctacaaataatatga 56040584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 2521096 - 2521024
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| |  ||||| ||||||||||||||||||||||||    
T  2521096 acaaaaacaaaacgatattcattcattcaaat----cgatagagtccatcagatacaaacatcgctaaaaacgtaaa 2521024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 9178567 - 9178524
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| |||  |||||||||||||||||||||||    
T  9178567 caagttaatagcatacaacgacaaaatgcctacaaataatatga 9178524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 26633463 - 26633535
Alignment:
Q  211 acaaaaacaaaac-atattcattaattcaaataaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||||| ||||||||| ||||||||    ||||||| || ||||| |||||||||| |||||||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaat----cgatagagtacatcagatacaaacatcactaaaaacgtaaa 26633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 27652157 - 27652114
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||    
T  27652157 caagttaatagcatacaacggcaaaatgtctacaaataatatga 27652114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 11299902 - 11299948
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||    
T  11299902 acccaagttaataacataaaacgccaaaatgcctacgaataatatga 11299948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 17949143 - 17949181
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaa 280  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  17949143 aaatcgatagagtatatcagatacaaacatcgctaaaaa 17949181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 17952995 - 17953033
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaa 280  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  17952995 aaatcgatagagtatatcagatacaaacatcgctaaaaa 17953033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 18935999 - 18935953
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| | || || |||||||||||||||||||||||||    
T  18935999 acccaagttaataacgtacaatagcaaaatgcctacaaataatatga 18935953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 21686134 - 21686180
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||||    
T  21686134 acccaagttaataacatacagcggcaaaatgcctacaaataatatga 21686180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 22611400 - 22611354
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  22611400 acccaatttaataccatacaacggcaaaatgcctacaaataatatga 22611354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 29960841 - 29960887
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||| |||||| ||| |||||||||||||||||| |||||    
T  29960841 acccaagttaaaagcatacaacggcaaaatgcctacaaatagtatga 29960887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 32766731 - 32766685
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  || ||||||||||||||||||||    
T  32766731 acccaagttaatagcatacaacgacataatgcctacaaataatatga 32766685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 37465699 - 37465653
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||    
T  37465699 acccaagttaatagcatacaacgacaaaatgcttacaaataatatga 37465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 45418729 - 45418683
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||| |||||||||||| |||  |||||||||||||||||||||||    
T  45418729 acccatgttaatagcatacaacgacaaaatgcctacaaataatatga 45418683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 53444335 - 53444289
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| | |||||  |||||||||||||||    
T  53444335 acccaagttaatagcataaaacggaaaaatatctacaaataatatga 53444289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 29120276 - 29120317
Alignment:
Q  323 agttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||  |||||||||||||||||||||||    
T  29120276 agttaatagcatacaacgacaaaatgcctacaaataatatga 29120317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 56156534 - 56156575
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataa 359  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  56156534 acccaggtaaatagcataaaacggcaaaatgcctacaaataa 56156575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 13634404 - 13634360
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||||||||| ||||||    
T  13634404 aaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaa 13634360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 22806751 - 22806707
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||| |||| |||| |||||||| ||||||||||||||    
T  22806751 ccaagttaataacatacaacaacaaaatgcttacaaataatatga 22806707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 24098889 - 24098933
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||    
T  24098889 aaatcgatagagtacatcagatacaaacattgctaaaaacgtaaa 24098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 24098962 - 24099005
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| || | ||||||||||||||||||||||||    
T  24098962 ccaagttaatagcatcaa-cggcaaaatgcctacaaataatatga 24099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 48257452 - 48257496
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || ||||| ||||||||||| ||||||||||||    
T  48257452 aaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaa 48257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 52944526 - 52944482
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| |||  ||||||||||||||| |||||||    
T  52944526 ccaagttaatagcatataactacaaaatgcctacaaaaaatatga 52944482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 37021 - 36976
Alignment:
Q  319 cccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  37021 cccaagttaatagcataaaacatcaaaatacctacaaataatatga 36976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 71192 - 71236
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatat 362  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  71192 acccaagttaatagcatacaacaacaaaatgcctacaaataatat 71236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 14763 - 14809
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  14763 acccaagttaatagcatataatagcaaaatgcatacaaataatatga 14809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 9934 - 9980
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||    
T  9934 acccaagtcaatagcataaaacggaaaaatgcctacaaataatatga 9980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 9862 - 9906
Alignment:
Q  242 aaatcgatagattatatcagctacaaacatcgctaaaaacgtaaa 286  Q
    ||||||||||| || | ||| ||||||||||||||||||||||||    
T  9862 aaatcgatagagtacaccagatacaaacatcgctaaaaacgtaaa 9906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 50973 - 50927
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  50973 acccaagttaatagcatacaatggcaaaatgcctacaaataatatga 50927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 57982 - 58026
Alignment:
Q  320 ccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||    
T  57982 ccaagttaatagcatataacggcaaaatgcctacaaaaaatatga 58026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 65937 - 65980
Alignment:
Q  321 caagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||||| |||  |||||||||||||||||||||||    
T  65937 caagttaatagcatacaacgacaaaatgcctacaaataatatga 65980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 7912 - 7866
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    ||||||||||||| |||| || |||||||| ||||||||||||||||    
T  7912 acccaagttaataacatacaatagcaaaatccctacaaataatatga 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 93304 - 93258
Alignment:
Q  318 acccaagttaatagcataaaacagcaaaatgcctacaaataatatga 364  Q
    |||||||||||||||| | |||| ||||||||||||||| |||||||    
T  93304 acccaagttaatagcacacaacaacaaaatgcctacaaacaatatga 93258  T

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