View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9282_low_18 (Length: 480)
Name: NF9282_low_18
Description: NF9282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9282_low_18 |
 | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 422; Significance: 0; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 19 - 476
Target Start/End: Complemental strand, 34456198 - 34455742
Alignment:
| Q |
19 |
aatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34456198 |
aatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataac |
34456099 |
T |
|
| Q |
119 |
atcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatc |
218 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34456098 |
atcatttcaatgacatgattcaaactacccaaagggagagctaactaactaaggaactcaccttgaaatacttttggaaaaacttgcaaagcatctgatc |
34455999 |
T |
|
| Q |
219 |
aacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaa |
318 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34455998 |
aacaatctgcagcttttgcgatctccaaa-ctccataatcacttttccaaaacaacttatgccctagcttatagtttttaccctttttgaaacatctcaa |
34455900 |
T |
|
| Q |
319 |
ctcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcacttt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34455899 |
ctcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcacttt |
34455800 |
T |
|
| Q |
419 |
tgtcactaataaaacagcttatcattttaccgttactcatataccagtataatctacc |
476 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
34455799 |
tgtcactaataaaacagcttatcattttaccgttactcatataccaatataatatacc |
34455742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 27 - 417
Target Start/End: Complemental strand, 3078467 - 3078080
Alignment:
| Q |
27 |
cataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcatttc |
126 |
Q |
| |
|
||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||| |
|
|
| T |
3078467 |
cataacattgatatcatataagatttcattcacattatcatgattttgcataaccattaaaatctcttttgtattgagtaaaagtaaataacacaatttg |
3078368 |
T |
|
| Q |
127 |
aatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaacaatc |
225 |
Q |
| |
|
||||| |||||||||||||| |||||||| || ||||||||| || ||||||||| |||| | | ||| | |||| |||||| || ||| ||||| |
|
|
| T |
3078367 |
aatgacatgattcaaactactcaaagggacagttaactaactaaaggaactcaccgtgaatcattcctgg---agattg-aaagcagcttatccacaatt |
3078272 |
T |
|
| Q |
226 |
tgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaactcactt |
325 |
Q |
| |
|
|||||||| | | ||||| |||||||||||||||||||||||||| | |||||||||||||||||| | || || ||||||||||| |||||| ||||| |
|
|
| T |
3078271 |
tgcagcttcttctatctctaaaactccataatcacttttccaaaatagcttatgccctagcttataagtctttccctttttgaaacaactcaacccactt |
3078172 |
T |
|
| Q |
326 |
gtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||| || |||||| || |||| ||| ||| ||||||| |||| |||| || |||||||||||| |||||||||| |||||||||| |
|
|
| T |
3078171 |
gtgacatacttttacttaatgaaccaacatatacgaaaattcaaattttagtccctataccagaagttcattgtttggccatttaagcactt |
3078080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 27 - 417
Target Start/End: Original strand, 3081491 - 3081864
Alignment:
| Q |
27 |
cataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcatttc |
126 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || | |
|
|
| T |
3081491 |
cataacattgatatcatataagatttcattcacattatcatgactttgcataaccattaaaatctc--ttgtattgagtaaaagtaaataacacaatatg |
3081588 |
T |
|
| Q |
127 |
aatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaacaatc |
225 |
Q |
| |
|
||||| |||||||||||||| |||| ||| || ||||||||| || ||||||||| |||| | | ||| | |||| ||| || || ||| ||||| |
|
|
| T |
3081589 |
aatgacatgattcaaactactcaaatggatagttaactaactaaaggaactcaccgtgaatcattcctgg---agattg-aaaacagcttatccacaatt |
3081684 |
T |
|
| Q |
226 |
tgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaactcactt |
325 |
Q |
| |
|
|||||||| | | ||||| |||||||||||||||||||||||||| |||||||||| | || || ||||||||||| |||||| ||||| |
|
|
| T |
3081685 |
tgcagcttcttctatctctaaaactccataatcacttttccaaaa------------tagcttataggtctttccctttttgaaacaactcaacccactt |
3081772 |
T |
|
| Q |
326 |
gtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||| ||||||||| || |||||||| || ||||||| ||||||||| ||| |||| ||||||| |||||||||| |||||||||| |
|
|
| T |
3081773 |
gtgacatactcttacttaatgaaccagcatatatgaaaattcaaatttcagtccctgtaccaaaagttcattgtttggccatttaagcactt |
3081864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 415
Target Start/End: Complemental strand, 21958006 - 21957814
Alignment:
| Q |
222 |
aatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaactc |
321 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||||| || |||||||||| | |||||||| | ||||||| || ||||||||||||| |||| | |
|
|
| T |
21958006 |
aatctgcagcttttgctatctccaaaacttcataacca-ttttccaaaatagcttatgccttgacttataggcattgacttttttgaaacagtccaacac |
21957908 |
T |
|
| Q |
322 |
acttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcac |
415 |
Q |
| |
|
||||||| ||| |||||||| |||| ||| | | |||||||||||||||||| ||||| ||||||||||| ||||||| | |||||||| |
|
|
| T |
21957907 |
acttgtgacatactcctacttcatcaaccaacatatgcgaaaattctcatttcagtcactgcaacagaagttcaccgtttggctatttaagcac |
21957814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 464
Target Start/End: Complemental strand, 3078058 - 3078002
Alignment:
| Q |
408 |
ttaagcacttttgtcactaataaaacagcttatcattttaccgttactcatatacca |
464 |
Q |
| |
|
|||||||||| ||||| || || |||||||||||||||| || |||||||||||||| |
|
|
| T |
3078058 |
ttaagcacttctgtcattactagaacagcttatcatttttccattactcatatacca |
3078002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 390; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 19 - 476
Target Start/End: Original strand, 31315367 - 31315824
Alignment:
| Q |
19 |
aatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataac |
118 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31315367 |
aatactttcacaactttcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaatagc |
31315466 |
T |
|
| Q |
119 |
atcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatc |
218 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31315467 |
accatttcaatgacatgattcaaactacccaaagggagagttaactaactaaggaactcaccttgaaatacttttggaaaaacttgcaaagcatctgatc |
31315566 |
T |
|
| Q |
219 |
aacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaa |
318 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
31315567 |
aacaatctgcagcttttgcgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttctaccctttttgaaacatctcaa |
31315666 |
T |
|
| Q |
319 |
ctcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcacttt |
418 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31315667 |
ctcacttgtgttccactcttacttcatcgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcacttt |
31315766 |
T |
|
| Q |
419 |
tgtcactaataaaacagcttatcattttaccgttactcatataccagtataatctacc |
476 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
31315767 |
tgtcattaataaaacagcttatcattttaccgttactcatataccaatataatatacc |
31315824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 17 - 390
Target Start/End: Complemental strand, 31343208 - 31342838
Alignment:
| Q |
17 |
caaatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaata |
116 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
31343208 |
caaatactttcataacattcatatcatatacaatttcattcacattatcatgaatttgcataaccattaaaacctcaattgtattgagtaaaaggaaata |
31343109 |
T |
|
| Q |
117 |
acatcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctga |
216 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| | ||||||||||||||| || | |
|
|
| T |
31343108 |
gcaccatttcaatgacatgattcaaactacccaaagggagagttaactaactaaggaactcaccttgaattac---tcccaaaaattgcaaagcaactta |
31343012 |
T |
|
| Q |
217 |
tcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctc |
316 |
Q |
| |
|
|| | ||||| || ||| | | ||||||||||||| |||||| ||||||||||| | |||||||| | ||| ||| | || |||||| |||||| | | |
|
|
| T |
31343011 |
tccaaaatctccaacttctgctatctccaaaactctataatcgcttttccaaaatagcttatgccttgacttgtaggtcttgccttttccgaaacagccc |
31342912 |
T |
|
| Q |
317 |
aactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaa |
390 |
Q |
| |
|
||| |||||||| ||| || ||||| || |||||| || |||||||| |||||||||| ||||||||||| |
|
|
| T |
31342911 |
aacccacttgtgacatgctcctatttcatcgatcagcatatagaaaaattcccatttcagtccctgcaccagaa |
31342838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 313; Significance: 1e-176; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 19 - 417
Target Start/End: Original strand, 18111786 - 18112181
Alignment:
| Q |
19 |
aatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataac |
118 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18111786 |
aatactttcataacattcatatcatatacaatttcattcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaatagc |
18111885 |
T |
|
| Q |
119 |
atcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatc |
218 |
Q |
| |
|
| ||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18111886 |
accatttcaatgacatgattcaaactatccaaagggagagttaactaactaaggaactcaccttgaaatacttttggaaatgcttgcaaagcatctgatc |
18111985 |
T |
|
| Q |
219 |
aacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaa |
318 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18111986 |
aacaatctgcagcttttgcgatctccaatactccataatcacttttccaaaacaacttatgccttagcttatagtttttaccctttttgaaacatctcaa |
18112085 |
T |
|
| Q |
319 |
ctcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18112086 |
ctcacttgtgttccactcttacttcatcgac---catgtacaaaaattctcatttcagtctctgcaccagaagtttactgtttggccacttaagcactt |
18112181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 2746630 - 2746465
Alignment:
| Q |
19 |
aatactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataac |
118 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2746630 |
aatactttcataacattcgtatcatataaaatttcattcacattaacatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaatagc |
2746531 |
T |
|
| Q |
119 |
atcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttga |
184 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
2746530 |
accatttcaatgacatgattcaaactacccaaagggagagttaactaactaaggaactcaccttga |
2746465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 26 - 417
Target Start/End: Original strand, 28035026 - 28035406
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattat--catgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcat |
123 |
Q |
| |
|
|||||||||| |||||||||| | |||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
28035026 |
tcataacattgatatcatataaagtttcattcgcattatatcatgactttgcataaccattt---------ttgtattgagtaaaagtaaataacacaat |
28035116 |
T |
|
| Q |
124 |
ttcaatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaaca |
222 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||| ||||||||| || ||||||||| |||| | | ||| |||||| ||||| || ||| ||| |
|
|
| T |
28035117 |
tttaatgacatgattcaaactacccaaagggagagttaactaactaaaggaactcaccgtgaatcattcgtgg----aattgc-aagcagcttatccaca |
28035211 |
T |
|
| Q |
223 |
atctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaactca |
322 |
Q |
| |
|
|| |||||||| | | ||| ||||||||| |||||||||||| |||| | || || | | |||||||| | || |||||| |||||||||||||||| |
|
|
| T |
28035212 |
atttgcagcttctgctttctacaaaactccgtaatcacttttcgaaaatagctactgtcttggcttataggtctttccttttccgaaacatctcaactca |
28035311 |
T |
|
| Q |
323 |
cttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||||| || ||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||| | |||||||||| |
|
|
| T |
28035312 |
gttgtgacatactgttacttcatcaaccagcatacacaaaaatttccatttcagtccctgcaccagaagttcaccgtttggctatttaagcactt |
28035406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 5939201 - 5939347
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattat--catgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcat |
123 |
Q |
| |
|
|||||||||| |||||||||| | |||| ||| |||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||||| || |
|
|
| T |
5939201 |
tcataacattgatatcatataaagtttcattcgcattatatcataactttgcataaccattaaaacctcgtttatattgagtaaaagtaaataacacaat |
5939300 |
T |
|
| Q |
124 |
ttcaatgatatgattcaaactacccaaagggagagctaactaactaa |
170 |
Q |
| |
|
|| ||||| || ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5939301 |
tttaatgacataattcaaactacccaaagggagagttaactaactaa |
5939347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 19451636 - 19451792
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcattt |
125 |
Q |
| |
|
|||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| | |
|
|
| T |
19451636 |
tcataacattgatatcatataaaatttcattcacattatcatgacttagcataaccataaaaacctcgtttgtaccaagtaaaagtaaataacaaagtca |
19451735 |
T |
|
| Q |
126 |
caatgatatgattcaaactacccaaagggagagctaactaactaatgaactcacctt |
182 |
Q |
| |
|
||||| || ||||||||||| ||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
19451736 |
aaatgacatagttcaaactaccgaaaggaagagttaactaactaaggaactcacctt |
19451792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 5835831 - 5835965
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattat--catgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcat |
123 |
Q |
| |
|
|||||||||| |||||||||| | |||| ||| |||||| ||| |||||||||||||||||||||| || || |||||||||||||||||||||| || |
|
|
| T |
5835831 |
tcataacattgatatcatataaagtttcattcgcattatatcataactttgcataaccattaaaaccccgtttatattgagtaaaagtaaataacacaat |
5835930 |
T |
|
| Q |
124 |
ttcaatgatatgattcaaactacccaaagggagag |
158 |
Q |
| |
|
|| ||| | || ||||||||||||||||||||||| |
|
|
| T |
5835931 |
tttaataacataattcaaactacccaaagggagag |
5835965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 18112203 - 18112271
Alignment:
| Q |
408 |
ttaagcacttttgtcactaataaaacagcttatcattttaccgttactcatataccagtataatctacc |
476 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
18112203 |
ttaagcacttttgtcattaataaaacagcttatcattttaccgttactcatataccaatataatatacc |
18112271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 8055896 - 8055828
Alignment:
| Q |
348 |
accagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||||||||| |||||| ||| |||||||||| ||||||||||||||||| |||| || |||||||||| |
|
|
| T |
8055896 |
accagcatgcacaaaatttc-catttcagtccttgcaccagaagttcactttttgctcatttaagcactt |
8055828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 26 - 417
Target Start/End: Complemental strand, 6735170 - 6734780
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagt---aaaagtaaataacatca |
122 |
Q |
| |
|
|||||| ||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||| | |
|
|
| T |
6735170 |
tcataatattgatatcatataaaatttcattcacattatcgtgactttgcataaccattaaaatctcgtttgtattgagtaaaaaaagtaaataacacaa |
6735071 |
T |
|
| Q |
123 |
tttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaaca |
222 |
Q |
| |
|
||||| ||| |||||| ||||||||||||||||||| ||||||||||| ||||||||| |||| | || | || ||| |||||| || ||| || |
|
|
| T |
6735070 |
tttcactgacatgattaaaactacccaaagggagagttaactaactaaggaactcaccatgaatca---ttacaggaagttg-aaagcagcttatcccca |
6734975 |
T |
|
| Q |
223 |
atctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttaccttttttgaaacatctcaactca |
322 |
Q |
| |
|
|| |||||||| | | ||||||||||||||||||||| |||||||||| | |||||||| |||||||| | | || || ||| | ||||| |||||| || |
|
|
| T |
6734974 |
atttgcagcttcttctatctccaaaactccataatcatttttccaaaatagcttatgccttagcttatcggtctttccctttctaaaacaactcaaccca |
6734875 |
T |
|
| Q |
323 |
cttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
|||||| ||||||||| || |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
6734874 |
cttgtgacatactcttacttaatgaaccagcatatacaaaaattctcatttcagtccctgcaccagaagttcattgtttggccatttaagcactt |
6734780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 31663090 - 31662864
Alignment:
| Q |
20 |
atactgtcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagt-aaaagtaaataac |
118 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |
|
|
| T |
31663090 |
atactttcataacattcatatcatatacaatttcattcacattatcatgactttgcataaccattaaaacctcg-ttgtattgagtaaaaagtaaatagc |
31662992 |
T |
|
| Q |
119 |
atcatttcaatgatatgattcaaactacccaaagggagagctaactaactaatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatc |
218 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||| | | ||||||||||||| || ||| |
|
|
| T |
31662991 |
accatttcaatgacatgattcaaactacccaaagggagagttaactaactaaggaactcaccttaaattac---tcccagaaattgcaaagcaacttatc |
31662895 |
T |
|
| Q |
219 |
aacaatctgcagcttttacgatctccaaaac |
249 |
Q |
| |
|
| |||||||||||| | | ||||||||||| |
|
|
| T |
31662894 |
caaaatctgcagcttctgctatctccaaaac |
31662864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 393
Target Start/End: Complemental strand, 2894079 - 2893893
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttacctttttt |
306 |
Q |
| |
|
||||| || ||| ||||| |||||||||||| | ||||||||||||||| || |||||||||| | |||||| | | |||||||| | || | ||| |
|
|
| T |
2894079 |
aagcaacttatccacaatttgcagcttttactagctccaaaactccatagtccattttccaaaatagcttatgtcttggcttataggtcttgctctttcc |
2893980 |
T |
|
| Q |
307 |
gaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagtt |
393 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||||||| |||||||| |||||||| | ||||| ||||| ||||||| |||||| |
|
|
| T |
2893979 |
gaaacaactcaactcatttgtgacatactcttacttcatcaaccagcatatacaaaaaatttcattccagtccctgcacccgaagtt |
2893893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 415
Target Start/End: Original strand, 4853168 - 4853377
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttacctttttt |
306 |
Q |
| |
|
||||| || ||| ||||| |||||||||| | | |||||||||||||||||| |||||||||| | |||||| | | |||||||| |||| | ||| |
|
|
| T |
4853168 |
aagcagcttatccacaatttgcagcttttgctagctccaaaactccataatccattttccaaaatagcttatgtcttggcttataggtttttctctttcc |
4853267 |
T |
|
| Q |
307 |
gaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtac--aaaaattctcatttcagtctctgcaccagaagttcactgtttggc |
404 |
Q |
| |
|
|||||| |||| |||| ||||| |||||||||||| |||||||| ||| |||||||| |||| ||||| ||||||| ||||||| | ||||||| |
|
|
| T |
4853268 |
gaaacaactcagctcatttgtgacatactcttacttcatcaaccagcatatacaaaaaaattc-cattccagtccctgcaccggaagttcgccgtttggc |
4853366 |
T |
|
| Q |
405 |
cacttaagcac |
415 |
Q |
| |
|
| |||||||| |
|
|
| T |
4853367 |
tatttaagcac |
4853377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 6734757 - 6734699
Alignment:
| Q |
408 |
ttaagcacttttgtcactaataaaacagcttatcattttaccgttactcatataccagt |
466 |
Q |
| |
|
|||||||||||||| | || || |||||||||| |||||||| |||||||||||||||| |
|
|
| T |
6734757 |
ttaagcacttttgtaattactagaacagcttataattttaccattactcatataccagt |
6734699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 101; Significance: 7e-50; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 27 - 292
Target Start/End: Original strand, 15088832 - 15089094
Alignment:
| Q |
27 |
cataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcatttc |
126 |
Q |
| |
|
||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
15088832 |
cataacattgatatcatacaagatttcattcacattatcatgactttgcataaccattaaaatctcgtttgtattgagtaaaagtaaataacacaatttt |
15088931 |
T |
|
| Q |
127 |
aatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaacaatc |
225 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| ||||||||| || ||||||||| |||| | | ||| | |||| |||||| || ||| ||||| |
|
|
| T |
15088932 |
aatgacatgattcaaactattcaaagggagagttaactaactaaaggaactcaccgtgaatcattcctgg---agattg-aaagcaacttatccacaatt |
15089027 |
T |
|
| Q |
226 |
tgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatag |
292 |
Q |
| |
|
|||||||| | | ||||| |||||||||||||||||||||||||| | |||||||| || ||||||| |
|
|
| T |
15089028 |
tgcagcttcttctatctctaaaactccataatcacttttccaaaatagcttatgccttaacttatag |
15089094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 27 - 292
Target Start/End: Original strand, 22211440 - 22211702
Alignment:
| Q |
27 |
cataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcatttc |
126 |
Q |
| |
|
||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
22211440 |
cataacattgatatcatacaagatttcattcacattatcatgactttgcataaccattaaaatctcgtttgtattgagtaaaagtaaataacacaatttt |
22211539 |
T |
|
| Q |
127 |
aatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttgaaatacttttggaaaaaattgcaaagcatctgatcaacaatc |
225 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| ||||||||| || ||||||||| |||| | | ||| | |||| |||||| || ||| ||||| |
|
|
| T |
22211540 |
aatgacatgattcaaactattcaaagggagagttaactaactaaaggaactcaccgtgaatcattcctgg---agattg-aaagcaacttatccacaatt |
22211635 |
T |
|
| Q |
226 |
tgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatag |
292 |
Q |
| |
|
|||||||| | | ||||| |||||||||||||||||||||||||| | ||| |||| |||||||||| |
|
|
| T |
22211636 |
tgcagcttcttctatctctaaaactccataatcacttttccaaaatagcttctgccttagcttatag |
22211702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 22217916 - 22217987
Alignment:
| Q |
27 |
cataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgt |
98 |
Q |
| |
|
||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
22217916 |
cataacattgatatcatacaagatttcattcacattatcatgactttgcataaccattaaaatctcgtttgt |
22217987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 417
Target Start/End: Complemental strand, 44193431 - 44193348
Alignment:
| Q |
334 |
ctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||||||||| || |||||||| |||||||| | ||||||||||| |||| ||||||||||| |||||||||| |||||||||| |
|
|
| T |
44193431 |
ctcttacttaatgaaccagcatatacaaaaaatttcatttcagtccctgccccagaagttcattgtttggccatttaagcactt |
44193348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 44193326 - 44193269
Alignment:
| Q |
408 |
ttaagcacttttgtcactaataaaacagcttatcattttaccgttactcatataccag |
465 |
Q |
| |
|
|||||||||||||||| || || |||||||||| |||||| | ||||||||||||||| |
|
|
| T |
44193326 |
ttaagcacttttgtcattactagaacagcttataattttatcattactcatataccag |
44193269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 14114279 - 14114194
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatag |
292 |
Q |
| |
|
||||| || ||| ||||| |||||||||| | | |||||||||||||||||| |||||||||| | |||||| | | |||||||| |
|
|
| T |
14114279 |
aagcagcttatccacaatttgcagcttttgctagctccaaaactccataatccattttccaaaatagcttatgtcttggcttatag |
14114194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 198 - 417
Target Start/End: Complemental strand, 34150804 - 34150585
Alignment:
| Q |
198 |
aaaattgcaaagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagttttt |
297 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | | |||||||||||||||||||||||||||||||| | |||||||||||||||||| || | |
|
|
| T |
34150804 |
aaaattgcaaagcagcttatcaacagcctgcaacttctgctatctccaaaactccataatcacttttccaaaatagcttatgccctagcttatatcttat |
34150705 |
T |
|
| Q |
298 |
accttttttgaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcact |
397 |
Q |
| |
|
| ||||||||||| ||||||||| ||||||||| || | ||| ||| ||||||||| ||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
34150704 |
gtcctttttgaaacaactcaactcaattgtgttccactatcactccatcaaccagcatgcacaaaaatttgcatttcagtccttgcaccagaagttcact |
34150605 |
T |
|
| Q |
398 |
gtttggccacttaagcactt |
417 |
Q |
| |
|
|||| || |||||||||| |
|
|
| T |
34150604 |
ttttgctcatttaagcactt |
34150585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 25336835 - 25336995
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattat--catgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcat |
123 |
Q |
| |
|
|||||||||| |||||||||| | |||| ||| |||||| ||| ||||||||||||||||||||| ||| || |||||||||||||||||||||| || |
|
|
| T |
25336835 |
tcataacattaatatcatataaagtttcattcgcattatatcataactttgcataaccattaaaacgtcgtttatattgagtaaaagtaaataacacaat |
25336934 |
T |
|
| Q |
124 |
ttcaatgatatgattcaaactacccaaagggagagctaactaact-aatgaactcaccttg |
183 |
Q |
| |
|
| || || |||||||||||||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
25336935 |
attaacgacatgattcaaactacccaaagggagagttaactaactaaaggaactcaccttg |
25336995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 31113008 - 31112865
Alignment:
| Q |
26 |
tcataacattcatatcatatacaatttcgttcacattatcatgactttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcattt |
125 |
Q |
| |
|
||||| |||| |||| ||||| |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| | ||||||||||||||||| |||| |
|
|
| T |
31113008 |
tcatatcattgatattatataaaatttcattcacattatcatgactt-gcatatccattaaaacctcatttgtactaagtaaaagtaaataacacaattt |
31112910 |
T |
|
| Q |
126 |
caatgatatgattcaaactacccaaagggagagctaactaactaa |
170 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
31112909 |
caatgacatgattcaaactacccaaagagagagttaactaactaa |
31112865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 417
Target Start/End: Complemental strand, 33295663 - 33295453
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttacctttttt |
306 |
Q |
| |
|
||||| || ||| ||||| |||||||||||| | |||||||||||||||||| |||||||||| | |||||| | | |||||||| | || | ||| |
|
|
| T |
33295663 |
aagcagcttatccacaatttgcagcttttactagctccaaaactccataatccattttccaaaatagcttatgtcttggcttataggtcttgctctttcc |
33295564 |
T |
|
| Q |
307 |
gaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggcca |
406 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||| |||||||| || |||||| ||||||||| |||||||||||| | ||||||| | |
|
|
| T |
33295563 |
aaaacaactcaactcatttgtgacgtactcttacttcatcaaccagcatacacgaaaatttcaatttcagtccttgcaccagaagtacgtcgtttggcta |
33295464 |
T |
|
| Q |
407 |
cttaagcactt |
417 |
Q |
| |
|
|||||||||| |
|
|
| T |
33295463 |
tttaagcactt |
33295453 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 417
Target Start/End: Complemental strand, 5249367 - 5249284
Alignment:
| Q |
334 |
ctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| |||| ||||| ||||||| |||||| | ||||||| | |||||||||| |
|
|
| T |
5249367 |
ctcttacttcatcaaccagcatatacaaaaatttccattccagtccctgcacccgaagtttgccgtttggctatttaagcactt |
5249284 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 417
Target Start/End: Original strand, 28223239 - 28223449
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttacctttttt |
306 |
Q |
| |
|
||||| || ||| ||||| |||||||||| | | |||||||||||||||||| |||||||||| | |||||| | | |||||||| | || | ||| |
|
|
| T |
28223239 |
aagcagcttatccacaatttgcagcttttgctagctccaaaactccataatccattttccaaaatagcttatgtcttggcttataggtcttgctctttcc |
28223338 |
T |
|
| Q |
307 |
gaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggcca |
406 |
Q |
| |
|
|||||| ||||||||| ||| | ||||||||||| |||||||| |||||||| ||||| ||||| ||| ||| ||||||| ||||||| | |
|
|
| T |
28223339 |
gaaacaactcaactcatttgcgacatagtcttacttcatcaaccagcatatacaaaaaaattcattccagtccctgaacccgaagttcgtcgtttggcta |
28223438 |
T |
|
| Q |
407 |
cttaagcactt |
417 |
Q |
| |
|
|||||||||| |
|
|
| T |
28223439 |
tttaagcactt |
28223449 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 69538 - 69420
Alignment:
| Q |
69 |
actttgcataaccattaaaacctcgattgtattgagtaaaagtaaataacatcatttcaatgatatg-attcaaacta--cccaaagggagagctaacta |
165 |
Q |
| |
|
||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||||||| ||| |||||||||| ||||||||||||| |||||| |
|
|
| T |
69538 |
actttgcataagcattaaaacctctttggtattgagtaaaagtaaataatacaatttcaatgacatgaattcaaactacccccaaagggagagttaacta |
69439 |
T |
|
| Q |
166 |
actaatgaactcaccttga |
184 |
Q |
| |
|
||||| ||||| ||||||| |
|
|
| T |
69438 |
actaaggaacttaccttga |
69420 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 417
Target Start/End: Original strand, 23737 - 23947
Alignment:
| Q |
207 |
aagcatctgatcaacaatctgcagcttttacgatctccaaaactccataatcacttttccaaaacaacttatgccctagcttatagtttttacctttttt |
306 |
Q |
| |
|
||||| || ||| ||||| |||||||||| | | |||||||||||||||||| |||||||||| | |||||| | | |||||||| | || | ||| |
|
|
| T |
23737 |
aagcagcttatccacaatttgcagcttttgctagctccaaaactccataatccattttccaaaatagcttatgtcttggcttataggtcttgctctttcc |
23836 |
T |
|
| Q |
307 |
gaaacatctcaactcacttgtgttcccctcttacttcattgaccagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggcca |
406 |
Q |
| |
|
|||||| ||||||||| ||| | ||||||||||| |||||||| |||||||| ||||| ||||| ||| ||| ||||||| ||||||| | |
|
|
| T |
23837 |
gaaacaactcaactcatttgcgacatagtcttacttcatcaaccagcatatacaaaaaaattcattccagtccctgaacccgaagttcgtcgtttggcta |
23936 |
T |
|
| Q |
407 |
cttaagcactt |
417 |
Q |
| |
|
|||||||||| |
|
|
| T |
23937 |
tttaagcactt |
23947 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 25190800 - 25190732
Alignment:
| Q |
348 |
accagcatgtacaaaaattctcatttcagtctctgcaccagaagttcactgtttggccacttaagcactt |
417 |
Q |
| |
|
||||||||| |||||| ||| |||||||||| ||||||||||||||||| |||| || |||||||||| |
|
|
| T |
25190800 |
accagcatgcacaaaatttc-catttcagtccttgcaccagaagttcactttttgctcatttaagcactt |
25190732 |
T |
|
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