View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9282_low_46 (Length: 328)

Name: NF9282_low_46
Description: NF9282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9282_low_46
NF9282_low_46
[»] chr3 (9 HSPs)
chr3 (30-328)||(30825115-30825411)
chr3 (186-305)||(36672717-36672836)
chr3 (173-279)||(41850757-41850863)
chr3 (173-277)||(20647705-20647809)
chr3 (173-277)||(34422576-34422680)
chr3 (180-277)||(33069344-33069441)
chr3 (180-277)||(40488955-40489052)
chr3 (185-277)||(46116541-46116633)
chr3 (181-277)||(55008211-55008307)
[»] chr7 (6 HSPs)
chr7 (210-306)||(31249278-31249374)
chr7 (173-314)||(35516374-35516520)
chr7 (173-277)||(11410633-11410737)
chr7 (174-277)||(41892236-41892339)
chr7 (204-277)||(32670255-32670328)
chr7 (185-277)||(4067978-4068070)
[»] chr1 (10 HSPs)
chr1 (173-277)||(13253355-13253459)
chr1 (178-277)||(3831587-3831686)
chr1 (245-278)||(37638966-37638999)
chr1 (185-277)||(6889417-6889509)
chr1 (185-277)||(6891263-6891355)
chr1 (173-277)||(31493350-31493454)
chr1 (185-277)||(32239219-32239311)
chr1 (173-277)||(39860370-39860474)
chr1 (173-233)||(44969139-44969199)
chr1 (173-277)||(50096950-50097054)
[»] chr4 (12 HSPs)
chr4 (237-320)||(44523360-44523443)
chr4 (173-277)||(10010776-10010880)
chr4 (173-277)||(10017917-10018021)
chr4 (185-312)||(25040062-25040194)
chr4 (173-277)||(38307981-38308085)
chr4 (179-277)||(7363444-7363542)
chr4 (211-305)||(24390786-24390880)
chr4 (204-277)||(23106291-23106364)
chr4 (180-277)||(41487563-41487660)
chr4 (173-277)||(16711855-16711959)
chr4 (204-304)||(22608849-22608949)
chr4 (173-277)||(47691690-47691794)
[»] chr2 (4 HSPs)
chr2 (173-277)||(18075689-18075793)
chr2 (173-277)||(34726233-34726337)
chr2 (173-277)||(38213508-38213612)
chr2 (173-241)||(6283475-6283543)
[»] chr8 (4 HSPs)
chr8 (184-277)||(35737025-35737118)
chr8 (173-277)||(11989141-11989245)
chr8 (180-277)||(12939282-12939379)
chr8 (173-277)||(36684784-36684888)
[»] chr5 (5 HSPs)
chr5 (185-277)||(4049349-4049441)
chr5 (173-223)||(6644119-6644169)
chr5 (185-277)||(4101303-4101395)
chr5 (181-241)||(14949468-14949528)
chr5 (185-277)||(31271341-31271433)
[»] chr6 (5 HSPs)
chr6 (207-277)||(23645947-23646017)
chr6 (180-277)||(3027192-3027289)
chr6 (173-277)||(4111292-4111396)
chr6 (173-277)||(5153428-5153532)
chr6 (185-277)||(27613399-27613491)
[»] scaffold0259 (1 HSPs)
scaffold0259 (173-277)||(24889-24993)
[»] scaffold0037 (1 HSPs)
scaffold0037 (173-277)||(81248-81352)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 30 - 328
Target Start/End: Complemental strand, 30825411 - 30825115
Alignment:
Q  30 gagaagttagagaatccagaagtaagggacaaatggtgataataagtgagaccaggctatactttgattggcttgagcctcgtctacgaannnnnnngtg 129  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||       |||    
T  30825411 gagaagttagagaatccagaactaagggacaaatgatgataataagtgagaccaggctatgctttgataggcttgagcctcgtctatgaaattttttgtg 30825312  T
Q  130 aatctgaacatggcctatggtctttcgtatgcttannnnnnnnggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgctt 229  Q
    ||||| ||| |||||||||| |||||||||||||         |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  30825311 aatctaaacctggcctatggactttcgtatgctt-ttttttttggcctagcctaacttattcaaaagtctgacttgacctgaaagtttatttacatgctt 30825213  T
Q  230 actttaaattaaaggtattaaatagtctattttatctacttttaaataagtctaattgaccttaaaaccaatttcaccataaggccttaaaaacatatt 328  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  30825212 actttaaattaaag-tattaaatagtttattttatttacttttaaataagtctaattgaccttaaaacctatttcaccataagaacttaaaagcatatt 30825115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 36672836 - 36672717
Alignment:
Q  186 ctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaataagtctaat 285  Q
    ||||| |||||| || | |||||||||||| ||||||||||| ||||||||||||| |  |||||||| || ||||| ||||||| |||||| ||| |||    
T  36672836 ctatttaaaagtttggcctgacctgaaagcatatttacatgcctactttaaattaacgtaattaaatattcaattttgtctacttctaaataggtcaaat 36672737  T
Q  286 tgaccttaaaaccaatttca 305  Q
    || ||||||| || ||||||    
T  36672736 tggccttaaagcctatttca 36672717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 41850757 - 41850863
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    |||||||  ||||||||| || ||||| |  |||| ||||||| ||||||||||| | ||| | ||||||   ||||||||||| |||||||||||||||    
T  41850757 ggcctagtttgacctatttaatagtctaatatgacatgaaagcatatttacatgcatccttcatattaaaataattaaatagtcaattttatctactttt 41850856  T
Q  273 aaataag 279  Q
    |||||||    
T  41850857 aaataag 41850863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 20647809 - 20647705
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||||||| | || ||||||||  |||||||| || |||||   |||||||  |||||| | || |||||||||||||||    
T  20647809 ggcctggcctgacctatttaaaagtctggcctggcctgaaagtctatttacaggcctacttactattaaagtcattaaacattccattttatctactttt 20647710  T
Q  273 aaata 277  Q
    |||||    
T  20647709 aaata 20647705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 34422680 - 34422576
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  |||||| | || |||||||||||||||    
T  34422680 ggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctactttt 34422581  T
Q  273 aaata 277  Q
    |||||    
T  34422580 aaata 34422576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 33069441 - 33069344
Alignment:
Q  180 cctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||||||||| ||||||||| | || ||||||||| |||||||| || | |||   |||||||  | |||| | || ||||||||||||||||||||    
T  33069441 cctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctccttactattaaagtcactaaacattccattttatctacttttaaata 33069344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 40489052 - 40488955
Alignment:
Q  180 cctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||| |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  40489052 cctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 40488955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 46116541 - 46116633
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||| ||||| |||||||||||| ||||||||| | |||||   |||||||  |||||| | |  ||||||||||||| ||||||    
T  46116541 cctatttaaaaggctgacctgacctgaaagcctatttacatacctacttattattaaagtcattaaacatttcattttatctacttctaaata 46116633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 55008211 - 55008307
Alignment:
Q  181 ctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||||||| |||||| ||   || ||||||||| |||||||| || |||||   |||||||  | |||| | |||||||||||||||||||||||    
T  55008211 ctgacctatttaaaagtttggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaata 55008307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 31249374 - 31249278
Alignment:
Q  210 gaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaataagtctaattgaccttaaaaccaatttcac 306  Q
    ||||||||||  |||||| |||||||||||||||  ||||||||||  ||||||| |||||||||||||||| | ||| |||||||||| |||||||    
T  31249374 gaaagcttatccacatgcctactttaaattaaagtcattaaatagttcattttatatacttttaaataagtcaatttggccttaaaacctatttcac 31249278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 35516520 - 35516374
Alignment:
Q  173 ggcctagcctgacctattcaaaag-----tctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatcta 267  Q
    |||||||||||||||||| |||||     |||| | || ||||||||| |||||||| || ||||||| |||||||  |||||||| || ||||| | ||    
T  35516520 ggcctagcctgacctatttaaaagcctggtctggcctggcctgaaagcctatttacaggcctactttatattaaagtcattaaatattcaattttgtata 35516421  T
Q  268 cttttaaataagtctaattgaccttaaaaccaatttcaccataaggc 314  Q
    ||| |||||| | | ||||||||||||| || |||||||| ||||||    
T  35516420 cttctaaatatgccaaattgaccttaaagcctatttcaccgtaaggc 35516374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 11410633 - 11410737
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  11410633 ggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 11410732  T
Q  273 aaata 277  Q
    |||||    
T  11410733 aaata 11410737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 41892236 - 41892339
Alignment:
Q  174 gcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttta 273  Q
    |||| ||||| |||||| ||||||||| | || ||||||||| ||||| || || |||||   |||||||  | |||| | |||||||||||||||||||    
T  41892236 gcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttgcaggcctacttactattaaagtcactaaacattctattttatctactttta 41892335  T
Q  274 aata 277  Q
    ||||    
T  41892336 aata 41892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 32670328 - 32670255
Alignment:
Q  204 tgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||||||||| |||||||| || ||||| | |||||||  | |||| | | |||||||||||||||||||||    
T  32670328 tgacctgaaagcctatttacaggcatacttaatattaaagtcactaaacattttattttatctacttttaaata 32670255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 4067978 - 4068070
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | |||||||||||| ||||||||  | |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  4067978 cctatttaaaagtctggcctgacctgaaagcctatttacaaacatacttactattaaagtcactaaacattccattttatctacttttaaata 4068070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 13253355 - 13253459
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||||||||| |||||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  13253355 ggcctggcctggcctatttaaaagtctgacatgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 13253454  T
Q  273 aaata 277  Q
    |||||    
T  13253455 aaata 13253459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 3831587 - 3831686
Alignment:
Q  178 agcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| |||||| ||||||||||| || ||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  3831587 agcctggcctatttaaaagtctgacctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 3831686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 37638966 - 37638999
Alignment:
Q  245 tattaaatagtctattttatctacttttaaataa 278  Q
    ||||||||||||||||||||||||||||||||||    
T  37638966 tattaaatagtctattttatctacttttaaataa 37638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 6889509 - 6889417
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | |||||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  6889509 cctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 6889417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 6891355 - 6891263
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | |||||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  6891355 cctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 6891263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 31493454 - 31493350
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    |||||||||||||||||| |||||||||   || || ||||||||||||||| || || ||   |||||||  | |||| | || |||||||||||||||    
T  31493454 ggcctagcctgacctatttaaaagtctggtctggcccgaaagcttatttacaggcctatttactattaaagtcactaaacattccattttatctactttt 31493355  T
Q  273 aaata 277  Q
    |||||    
T  31493354 aaata 31493350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 32239311 - 32239219
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| |||| ||||||||  |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  32239311 cctatttaaaagtctggcttggcctgaaagactatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 32239219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 39860474 - 39860370
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  39860474 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 39860375  T
Q  273 aaata 277  Q
    |||||    
T  39860374 aaata 39860370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 44969139 - 44969199
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactt 233  Q
    ||||| |||||||||||| ||||||||| | || ||||||||| |||||||| || |||||    
T  44969139 ggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 44969199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 50097054 - 50096950
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| |||||| || |||| ||||||||| |||||||| |  |||||   |||||||  | |||| | || |||||||||||||||    
T  50097054 ggcctggcctggcctatttaaaagtatggcttggcctgaaagcctatttacaagtctacttactattaaagtaactaaacattccattttatctactttt 50096955  T
Q  273 aaata 277  Q
    |||||    
T  50096954 aaata 50096950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 44523443 - 44523360
Alignment:
Q  237 attaaaggtattaaatagtctattttatctacttttaaataagtctaattgaccttaaaaccaatttcaccataaggccttaaa 320  Q
    ||||||| |||||||||||  |||||||||||||||||||| ||  ||| | |||||||| | |||||||||||||| ||||||    
T  44523443 attaaagttattaaatagttcattttatctacttttaaataggttaaatcggccttaaaatctatttcaccataaggtcttaaa 44523360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 10010880 - 10010776
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  10010880 ggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 10010781  T
Q  273 aaata 277  Q
    |||||    
T  10010780 aaata 10010776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 10018021 - 10017917
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  10018021 ggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 10017922  T
Q  273 aaata 277  Q
    |||||    
T  10017921 aaata 10017917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 25040194 - 25040062
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtc-----tattttatctacttttaaataag 279  Q
    |||||| |||||||| ||||| | ||||||| |||||| | || ||||| |||||||||  | |||||||||     |||||||||||||| |||||| |    
T  25040194 cctatttaaaagtctaacttggcatgaaagcctatttaaaggcctacttcaaattaaagacaataaatagtctattctattttatctacttctaaatagg 25040095  T
Q  280 tctaattgaccttaaaaccaatttcaccataag 312  Q
     | ||||| ||||||| || |||||||| ||||    
T  25040094 ccaaattggccttaaagcctatttcaccgtaag 25040062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 38308085 - 38307981
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  38308085 ggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 38307986  T
Q  273 aaata 277  Q
    |||||    
T  38307985 aaata 38307981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 7363542 - 7363444
Alignment:
Q  179 gcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||| |||| | ||||||||| | |||||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  7363542 gcctggcctacttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 7363444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 24390880 - 24390786
Alignment:
Q  211 aaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaataagtctaattgaccttaaaaccaatttca 305  Q
    ||||| ||||||||||| |||| || |||||||  |||||||| |  ||||| |||||||||||||| ||  ||||| ||||||| || ||||||    
T  24390880 aaagcctatttacatgcctactatatattaaagtcattaaatatttaattttgtctacttttaaataggttaaattggccttaaagcctatttca 24390786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 23106364 - 23106291
Alignment:
Q  204 tgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||||||||| |||||||| ||||||||   |||||||  | |||| | || ||||||||||||||||||||    
T  23106364 tgacctgaaagcctatttacaagcttacttactattaaagtcactaaacattccattttatctacttttaaata 23106291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 41487563 - 41487660
Alignment:
Q  180 cctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||||||||| ||||||||  | || ||||||||| |||||||| || |||||   |||||||  |||||| | |  ||||||||||||||||||||    
T  41487563 cctgacctatttaaaagtctagcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacatttcattttatctacttttaaata 41487660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 16711855 - 16711959
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||||||| | |||||||||| | |||||||| || |||||   |||||||  | |||| | || ||||||| |||||||    
T  16711855 ggcctggcctggcctatttaaaagtctggcctgacctgaaaacctatttacaggcctacttactattaaagtcactaaacattccattttatatactttt 16711954  T
Q  273 aaata 277  Q
    |||||    
T  16711955 aaata 16711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 22608849 - 22608949
Alignment:
Q  204 tgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaataagtctaattgaccttaaaaccaattt 303  Q
    |||||||||| | |||||||| || ||||| | ||| |||   ||||||| || |||||||||||||||||||| |   ||||| |||||||||| ||||    
T  22608849 tgacctgaaaacctatttacaagcctacttcatattgaagtccttaaataatccattttatctacttttaaatatgctaaattggccttaaaacccattt 22608948  T
Q  304 c 304  Q
    |    
T  22608949 c 22608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 47691690 - 47691794
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  47691690 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 47691789  T
Q  273 aaata 277  Q
    |||||    
T  47691790 aaata 47691794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 18075793 - 18075689
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  18075793 ggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 18075694  T
Q  273 aaata 277  Q
    |||||    
T  18075693 aaata 18075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 34726337 - 34726233
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||| ||| | |||||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  34726337 ggcctggcctgacctatttaaaagcctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 34726238  T
Q  273 aaata 277  Q
    |||||    
T  34726237 aaata 34726233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 38213508 - 38213612
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| ||||||||| | |||||||||||| |||||||| |  |||||   |||||||  | |||| | || |||||||||||||||    
T  38213508 ggcctggcctgacctatttaaaagtctggcctgacctgaaagcctatttacaggtctacttactattaaagtcactaaacattccattttatctactttt 38213607  T
Q  273 aaata 277  Q
    |||||    
T  38213608 aaata 38213612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 6283475 - 6283543
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaa 241  Q
    ||||| |||||||||||| |||||||||   |||||||||||| || ||||| || ||||||| |||||    
T  6283475 ggcctggcctgacctatttaaaagtctggactgacctgaaagcctacttacaggcctactttatattaa 6283543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 35737118 - 35737025
Alignment:
Q  184 acctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||||| ||||||||||| |||||| ||||  |||||| |||  || |||| |||||||  ||||||||||  |||||||||| |||||||||    
T  35737118 acctatttaaaagtctgacctgacctaaaagtctatttatatgtctattttatattaaagtcattaaatagttcattttatctatttttaaata 35737025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 11989141 - 11989245
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| |||||||||||| |||| |||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  11989141 ggcctggcctgacctatttaaaattctggcctggcctgaaagcctatttacaggcctacttaccattaaagtcactaaacattccattttatctactttt 11989240  T
Q  273 aaata 277  Q
    |||||    
T  11989241 aaata 11989245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 12939282 - 12939379
Alignment:
Q  180 cctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||| ||||| ||||||||||| |||||||||| | ||| ||||  | ||||| | |||||||  |||||||| |  ||||||||||||| ||||||    
T  12939282 cctgatctatttaaaagtctgacatgacctgaaaacctatatacaaacctacttcacattaaagtcattaaataattcattttatctacttctaaata 12939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 36684784 - 36684888
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  36684784 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 36684883  T
Q  273 aaata 277  Q
    |||||    
T  36684884 aaata 36684888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 4049441 - 4049349
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  |||||| | || ||||||||||||||||||||    
T  4049441 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaata 4049349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 6644169 - 6644119
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttac 223  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||| |||||||    
T  6644169 ggcctggcctgacctatttaaaagcctgacctgacctgaaagcctatttac 6644119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 4101303 - 4101395
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||| ||| | || ||||||||| |||||||| || |||||   ||||||| || |||| | || ||||||||||||||||||||    
T  4101303 cctatttaaaagcctggcctggcctgaaagcctatttacaagcctacttactattaaagttactaaacattccattttatctacttttaaata 4101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 14949528 - 14949468
Alignment:
Q  181 ctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaa 241  Q
    |||||||||| |||||||||   |||||||||||| || |||||||| ||||||| |||||    
T  14949528 ctgacctatttaaaagtctggactgacctgaaagcctacttacatgcctactttatattaa 14949468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 31271433 - 31271341
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  31271433 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 31271341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 23645947 - 23646017
Alignment:
Q  207 cctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||||||| |||||||| ||||||||   |||||||  |||||| | || ||||||||||||||||||||    
T  23645947 cctgaaagcgtatttacaggcttacttactattaaagtcattaaacattccattttatctacttttaaata 23646017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 3027289 - 3027192
Alignment:
Q  180 cctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    ||||||||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  3027289 cctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 3027192  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 4111396 - 4111292
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  4111396 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 4111297  T
Q  273 aaata 277  Q
    |||||    
T  4111296 aaata 4111292  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 5153428 - 5153532
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  5153428 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 5153527  T
Q  273 aaata 277  Q
    |||||    
T  5153528 aaata 5153532  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 27613399 - 27613491
Alignment:
Q  185 cctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctacttttaaata 277  Q
    |||||| ||||||||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || ||||||||||||||||||||    
T  27613399 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaata 27613491  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 24889 - 24993
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||||| ||| |||||| ||||| |||   |||||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  24889 ggcctagtctggcctatttaaaagcctggtctgacctgaaagcctatttacaggcctacttactattaaagccactaaacattccattttatctactttt 24988  T
Q  273 aaata 277  Q
    |||||    
T  24989 aaata 24993  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 277
Target Start/End: Complemental strand, 81352 - 81248
Alignment:
Q  173 ggcctagcctgacctattcaaaagtctgacttgacctgaaagcttatttacatgcttactttaaattaaaggtattaaatagtctattttatctactttt 272  Q
    ||||| ||||| |||||| ||||| ||| | || ||||||||| |||||||| || |||||   |||||||  | |||| | || |||||||||||||||    
T  81352 ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttt 81253  T
Q  273 aaata 277  Q
    |||||    
T  81252 aaata 81248  T

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