View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9283_low_17 (Length: 252)
Name: NF9283_low_17
Description: NF9283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9283_low_17 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 32050935 - 32050701
Alignment:
| Q |
18 |
gtgaaggcaatagaactaattaaagtagaatggaaaacatgctgatctttatattcaagtttccttgtctgctataatagttgtggtcactggtcatttc |
117 |
Q |
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| T |
32050935 |
gtgaaggcaatagaactaattaaagtagaatggaaaacatgctgatctttatattcaagtttccttgtctgctataatagttgtggtcactggtcatttc |
32050836 |
T |
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| Q |
118 |
aattgctaatgattccacccttcatgtgtagtttaatttaaatgtcatgctgataagtgataacaatgttgaaaatcagtctttttgctttcacaattac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32050835 |
aattgctaatgattccacccttcatgtgtagtttaatttaaatgtcatgctgataagtgataacaatgttgaaaatcagtctttttgctttcacaattac |
32050736 |
T |
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| Q |
218 |
taacatttaattataggtccaccatatataatttt |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32050735 |
taacatttaattataggtccaccatatataatttt |
32050701 |
T |
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