View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9284_low_29 (Length: 445)
Name: NF9284_low_29
Description: NF9284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9284_low_29 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 46)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 10363950 - 10364364
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363950 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
10364049 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10364050 |
tttgcaaacgaagtatatcttttctcttttcaaaatgttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattgaaagg |
10364149 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||| ||||||||||||||||||||||| || | ||| ||||||| || |||||| |||||||||||||||| ||||||||||| | ||||| ||| |
|
|
| T |
10364150 |
agataaaaggaagttccacacctgattacttctgtttccagcttgtttactctccattgtgcatcgcagggaatcataactgatttcgtgaagcaaatcc |
10364249 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
|| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
10364250 |
tcggcatcaaagacagcatctttcaagccatcaagccattgtttgacagcaggattgttgatctgcttctcttctgcgtcatccagcacaacttgaagag |
10364349 |
T |
|
| Q |
401 |
tgagcagtgttgttt |
415 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10364350 |
tgagcagtgttgttt |
10364364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 10580518 - 10580093
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||||||| |||| | | ||||| || | || |||| |
|
|
| T |
10580518 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcgttaaacacagaacttgaaggagttccatgagaaactctagcactcttag |
10580419 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| ||| | |||||| ||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580418 |
tttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
10580319 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580318 |
agaagaaaggaagttccacacctgattagttttgttttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
10580219 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580218 |
tcagcatcaatgatagcatctttcaagtcatcaagccatagtttgacagcaggattattgatctgcttctcctctgcatcatccagcacaacttgaagag |
10580119 |
T |
|
| Q |
401 |
tgagcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
10580118 |
tgagcagtgttgttttaagctgcctc |
10580093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 10088707 - 10088282
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| | |||||| |
|
|
| T |
10088707 |
atgttcattattgtctctttatcatccttcctacccaccatgacagattcatttaccaccgaacttgaaggagttctatgtgaaacccttgcgattttag |
10088608 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
|||||| || |||||||||||| ||| | |||| | ||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
10088607 |
tttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaagctattaaaagg |
10088508 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||| |||||||||||| |||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||||||| |
|
|
| T |
10088507 |
agatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaatcataactgatttcgctgagcaagtcc |
10088408 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10088407 |
tcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctccgcatcatccagcacaacttgaagag |
10088308 |
T |
|
| Q |
401 |
tgagcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
10088307 |
tgagcagtgttgttttcagctgcctc |
10088282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 426
Target Start/End: Complemental strand, 10195590 - 10195165
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |||||| |
|
|
| T |
10195590 |
atgttcattattgtctctttatcatcctttctacccaccatgacagattcatttaccactgaacttgaaggagttctatgtgaaacccttgcgtttttag |
10195491 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
|||||| || |||||||||||| ||| | |||| | ||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
10195490 |
tttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaagctattaaaagg |
10195391 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||| |||||||||||| |||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| ||||||| |
|
|
| T |
10195390 |
agatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaatcataactgatttcgctgaacaagtcc |
10195291 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10195290 |
tcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctccgcatcatccagcacaacttgaagag |
10195191 |
T |
|
| Q |
401 |
tgagcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
10195190 |
tgagcagtgttgttttcagctgcctc |
10195165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 10375997 - 10376422
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |
|
|
| T |
10375997 |
atgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccacttttag |
10376096 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
|||||| || |||||||||||| || | |||| | ||||||||| |||||||||| |||||| || |||||||||||||| |||||| | |||||||| |
|
|
| T |
10376097 |
tttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggtgttaaaagg |
10376196 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10376197 |
agaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcataactgatttcattgagcaagtcc |
10376296 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376297 |
tcagcatcaaagatagcatctttcaagtcatcaagccattgcttgacagaaggattgatgatctgcttctcctctgcatcatccagcacaacttgaagag |
10376396 |
T |
|
| Q |
401 |
tgagcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
|||||||||||||||| | ||||||| |
|
|
| T |
10376397 |
tgagcagtgttgtttttaactgcctc |
10376422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 10434196 - 10434621
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||| ||||||||||| ||||| | ||||| || ||||| | |
|
|
| T |
10434196 |
atgttcattattgtctctttgtcatccttccttccaaccatgaaagattcattgaccacagaacttgaaggatttctatgagaaactctcccacttttgg |
10434295 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
|||||| || |||||||||||| ||| | |||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||| |
|
|
| T |
10434296 |
tttgcagaccaagtatatctttattctgtgcaaaaagttgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaaactattaaaagg |
10434395 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||| |
|
|
| T |
10434396 |
agatgaaaggaagttcaacacctgattagttttgttttgagcatgtgtattctccaccttggatcgaagggaatcataactgatttcgttgagcaagtcc |
10434495 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
|| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10434496 |
tcggcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcaggtttgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
10434595 |
T |
|
| Q |
401 |
tgagcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
|||| ||||||||||| ||||||||| |
|
|
| T |
10434596 |
tgagaagtgttgttttcagctgcctc |
10434621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 9838778 - 9838373
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| || | ||||||| |
|
|
| T |
9838778 |
atgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttag |
9838679 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| |||||||||||| ||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||| | || || ||||||||||| |
|
|
| T |
9838678 |
tttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaattgatctctttgtaaaaactattaaaagg |
9838579 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
9838578 |
agaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcgtaactgatttcgttgagcaaatcc |
9838479 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||| | |||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||| || ||| | |||||| |
|
|
| T |
9838478 |
tcagcatcaaagacaacatctttcaagttatcaagccactgtttgacatggggattgctgatctgcttctcctctgcatcatctagaacagcctgaagat |
9838379 |
T |
|
| Q |
401 |
tgagca |
406 |
Q |
| |
|
|||||| |
|
|
| T |
9838378 |
tgagca |
9838373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 9849656 - 9849251
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| || | ||||||| |
|
|
| T |
9849656 |
atgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttag |
9849557 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| |||||||||||| ||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||| | || || ||||||||||| |
|
|
| T |
9849556 |
tttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaattgatctctttgtaaaaactattaaaagg |
9849457 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
9849456 |
agaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcgtaactgatttcgttgagcaaatcc |
9849357 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||| | |||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||| || ||| | |||||| |
|
|
| T |
9849356 |
tcagcatcaaagacaacatctttcaagttatcaagccactgtttgacatggggattgctgatctgcttctcctctgcatcatctagaacagcctgaagat |
9849257 |
T |
|
| Q |
401 |
tgagca |
406 |
Q |
| |
|
|||||| |
|
|
| T |
9849256 |
tgagca |
9849251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 416
Target Start/End: Complemental strand, 11769151 - 11768736
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||| |
|
|
| T |
11769151 |
atgttcattattgtctctttgtcattcttcctacccactatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctagcacttttag |
11769052 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| | ||||||||| | | | |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | | |||||||| |
|
|
| T |
11769051 |
tttgcaaacctaatatatctttattttgtgcaaaaagttgcaggctttcacacatgatcttcatatgggaattgatctctccatagatgtttttaaaagg |
11768952 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||| ||| ||||||| | ||||||| ||||||||| ||||| || ||||| |||| || ||| || ||| |
|
|
| T |
11768951 |
ggatgaaagtaagttccacacctgattagttttgtttctagcttgtttcttctccatcttgcatcggagggagtcataacttatttgatcgagtaaatcc |
11768852 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||| | ||||| | |
|
|
| T |
11768851 |
tcagcatcaaagatagcgtctttcaagtcatcaagccattgtttgacagcaagattgttcatctgcttctcctccgcatcatccagtacagcctgaagtg |
11768752 |
T |
|
| Q |
401 |
tgagcagtgttgtttt |
416 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
11768751 |
tgagcagggttgtttt |
11768736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 8861203 - 8860805
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||| ||||||||| ||||| || ||||| ||||||||||||||||| || |||||||||||||| |||||||| ||||| | |||||| |
|
|
| T |
8861203 |
atgttcattactgtctctttatcatcatttctaccaaccatgacagattcattaactactgaacttgaaggggttctacgagaaactttaccaattttag |
8861104 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| ||| |||||||| | | | |||| ||||| ||| ||||||||||||||||| ||||||||||||||||| |||||| | |||||||| |
|
|
| T |
8861103 |
tttgcaaaccaaggatatctttatgttgtgcgaaaatttgcaagctatcacacatgatcttcatttgggaattgatctctctgtagaaggtgttaaaagg |
8861004 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||||||| |||||||| ||| |
|
|
| T |
8861003 |
agaagaaaggaagttccacacctgattagttttgtttgcagcttgtgtatcctccaccttgcatcgtaatgaatcataactgatttggttgagcaaatcc |
8860904 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
399 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8860903 |
tcagcatcaaagagagcatctttcaagtcatcaagccattgtttgacagcacgattgttgatctgcttctcctctgcatcatccagcacagcttgaaga |
8860805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 10077186 - 10076769
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaa---cccttgtgcttt |
97 |
Q |
| |
|
|||||||||||||||||||||||| || | |||| ||||| ||||||||||||||||||||||||||||||||||||| |||| | || | ||| |
|
|
| T |
10077186 |
atgttcattattgtctctttgtcacgctccataccaaccatctcagattcatttaccactgaacttgaaggtgttctacgagaaattactctagcaattt |
10077087 |
T |
|
| Q |
98 |
tagtttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaa |
197 |
Q |
| |
|
||||||||| || ||||| |||||| ||| | |||| | ||||| |||||||||||||||||| | || |||||||||||| | |||||||||||||| |
|
|
| T |
10077086 |
tagtttgcagaccaagtacatctttattctgtgcaaacaattgcaacctttcacacatgatcttcgtttgagaattgatctctttgtagaagctattaaa |
10076987 |
T |
|
| Q |
198 |
aggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaag |
297 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
10076986 |
aggagatgaaaggaagttcaacacctgattagttttgttttgagcttgtgcattctccaccttgcatcgcagtgaatcgtaactgatttcgttgagcaag |
10076887 |
T |
|
| Q |
298 |
tcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaa |
397 |
Q |
| |
|
||||| |||||||||| |||||||||||||| || |||||| ||| ||||| |||||| ||||||||||||||||||||||||| || ||| | |||| |
|
|
| T |
10076886 |
tcctcggcatcaaagacagcatctttcaagttatcaagccactgtctgacatggggattgctgatctgcttctcctctgcatcatctagtacagcctgaa |
10076787 |
T |
|
| Q |
398 |
gagtgagcagtgttgttt |
415 |
Q |
| |
|
|| |||||| ||||||| |
|
|
| T |
10076786 |
gattgagcatggttgttt |
10076769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 11149006 - 11149420
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||| ||||| |||||||||||||||| ||||| ||||||| |||||||| ||||| ||||| |||||||||||| | ||| || | ||||||| |
|
|
| T |
11149006 |
atgttcgttattatctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaactagaaggtgttctatggaaaattctagcacttttag |
11149105 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| ||| |||||||| | | | |||||| ||||||| | ||||||||| ||||||| ||||||||||||||||| |||| | | |||||||| |
|
|
| T |
11149106 |
tttgcaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttcatttgggaattgatctctctgtagatggtgttaaaagg |
11149205 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| || || ||||| |||| ||| ||||| ||| |
|
|
| T |
11149206 |
agaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagtgattcataactaatttgattcagcaaatcc |
11149305 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |
|
|
| T |
11149306 |
tcggcatcaaagatagcatctttcaagtcatcaagccattgtttgacagcaggattgttgatctgcttctcatcagcatcatccagcacagcttgaagaa |
11149405 |
T |
|
| Q |
401 |
tgagcagtgttgttt |
415 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11149406 |
ccagcagtgttgttt |
11149420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 11131178 - 11131592
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||| ||||||| |||||||| ||||| ||||| |||||||||||| | ||| || | ||||||| |
|
|
| T |
11131178 |
atgttcgttattgtctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaactagaaggtgttctatggaaaattctagcacttttag |
11131277 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
|||| |||| ||| |||||||| | | | |||||| ||||||| | ||||||||| |||| || |||||||||||||||| ||||| | | |||||||| |
|
|
| T |
11131278 |
tttgtaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttaatttgggaattgatctctccatagatgtttttaaaagg |
11131377 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| || || ||||| |||| ||| ||||| ||| |
|
|
| T |
11131378 |
agaagaaaggaagttccagacctgattagttttgtttgcagcttgtgtattctccaccttgcatcgcagtgactcataactaatttgattcagcaaatcc |
11131477 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
|| |||||||||||||||||||||||||||| || ||||| |||||||||| | |||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
11131478 |
tccgcatcaaagatagcatctttcaagtcatcaacccattttttgacagcacggttgttgatctgcttctcctcagcatcatccagcacagcttgaagaa |
11131577 |
T |
|
| Q |
401 |
tgagcagtgttgttt |
415 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11131578 |
ccagcagtgttgttt |
11131592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 10889223 - 10888825
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||| ||||||||||||||||| || |||||||||||||| |||||||| ||||| | |||||| |
|
|
| T |
10889223 |
atgttcattattgtctctttatcatcatttctaccaaccatgacagattcattaactactgaacttgaaggggttctacgagaaactttaccaattttag |
10889124 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| ||| |||||||| | | |||||||||||| ||| | ||||||||||||||| ||||||||||||||||| |||||| | |||||||| |
|
|
| T |
10889123 |
tttgcaaaccaaggatatctttatgttgtgcaaaaagttgcaagctattacacatgatcttcatttgggaattgatctctctgtagaaggtgttaaaagg |
10889024 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||| | |||||||||||||||||||||||||| || || ||||| |||| || ||||| ||| |
|
|
| T |
10889023 |
agaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcaatgattcataactaatttggttcagcaaatcc |
10888924 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
399 |
Q |
| |
|
|| |||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
10888923 |
tccgcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcacggttgttgatctgcttctcctcagcatcatccagcacagcttgaaga |
10888825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 395
Target Start/End: Original strand, 11160169 - 11160563
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttag |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||| |||||||||||| |||| || |||||||||||||| |||||||| ||||| | ||||| |
|
|
| T |
11160169 |
atgttcattattgtctctttatcatcatttctaccaaccatgacagatgcattaactactgaacttgaaggggttctacgagaaactttaccaattttac |
11160268 |
T |
|
| Q |
101 |
tttgcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaagg |
200 |
Q |
| |
|
||||||||| ||| |||||||| | | | |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||| |
|
|
| T |
11160269 |
tttgcaaaccaaggatatctttatgttgtgcgaaaagttgcaagctatcacacatgatcttcatttgggaattgatctctctatagaaggtgttaaaagg |
11160368 |
T |
|
| Q |
201 |
agaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcc |
300 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| || || ||||| |||| ||| ||||| ||| |
|
|
| T |
11160369 |
agaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagtgattcataactaatttgattcagcaaatcc |
11160468 |
T |
|
| Q |
301 |
tcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttg |
395 |
Q |
| |
|
|| |||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
11160469 |
tcggcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcacggttgttgatctacttctcctctgcatcatccagcacagcttg |
11160563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 14 - 415
Target Start/End: Complemental strand, 13332808 - 13332407
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||| | ||||| || | ||| ||||||||| | ||| |
|
|
| T |
13332808 |
tctctttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttctaagagaaactctcgcgctcacagtttgcaagccaag |
13332709 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | ||||||||||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||||| |||| || |
|
|
| T |
13332708 |
aatatctct-ctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagacgaaaagag |
13332610 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| ||||||| | ||||||||||| ||||||||||| |||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
13332609 |
gttccaaacctgattagtcatgttttcagcttgtttcttctccaccttacatcgcagggagtcgtaattgatttggttaagcaaatcctcagcatcatag |
13332510 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| | ||||||| ||||||||||| |
|
|
| T |
13332509 |
attgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatccagcaccgcctgaagagcgagcagtgttg |
13332410 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
13332409 |
ttt |
13332407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 415
Target Start/End: Complemental strand, 13160876 - 13160483
Alignment:
| Q |
22 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatctt |
121 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| | ||||| || | ||| ||||||||| | ||| |||||| |
|
|
| T |
13160876 |
tcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcgcgctcacagtttgcaagccaaggatatctc |
13160777 |
T |
|
| Q |
122 |
ttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaagttccacac |
221 |
Q |
| |
|
|| | | ||||||||||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||||| |||| || |||||| || |
|
|
| T |
13160776 |
tttgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagatgaaaagaggttccaaac |
13160677 |
T |
|
| Q |
222 |
ctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatct |
321 |
Q |
| |
|
||||||||| | |||| ||||||| | ||||||||| | ||||||||||| |||||| |||||| || ||||| |||||||||||| |||| |||||| |
|
|
| T |
13160676 |
ctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtaattgatttggttaagcaaatcctcagcatcatagattgcatct |
13160577 |
T |
|
| Q |
322 |
ttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
415 |
Q |
| |
|
|||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
13160576 |
ttcagttgatccatccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaagagcgagcagtgttgttt |
13160483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 14 - 415
Target Start/End: Complemental strand, 13289569 - 13289168
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||| | ||||| || || ||||||||| | ||| |
|
|
| T |
13289569 |
tctctttatcatccttcctaccaaccataacagatttatttaccattgaacttgaaggcgttctaagagaaactctccctctcacagtttgcaagccaag |
13289470 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | ||||||| ||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||||| |||| || |
|
|
| T |
13289469 |
gatatctct-ctgttgtgcaaaaagctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagagttttaaaaggagatgaaaagag |
13289371 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| ||||||| | ||||||||||| ||||||||||| |||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
13289370 |
gttccaaacctgattagtcatgttttcagcttgtttcttctccaccttacatcgcagggagtcgtaattgatttggttaagcaaatcctcagcatcatag |
13289271 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||||| ||| ||||||| |
|
|
| T |
13289270 |
attgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaagagcgagtagtgttg |
13289171 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
13289170 |
ttt |
13289168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 14 - 415
Target Start/End: Complemental strand, 13343993 - 13343592
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| | ||||| || ||| ||||||||| | ||| |
|
|
| T |
13343993 |
tctctttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggtgttcttagagaaactctcccgctcacagtttgcaagccaag |
13343894 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | |||||| ||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||| ||||| |||| || |
|
|
| T |
13343893 |
gatatctct-ctgttgtgcaaaaatctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaacggagacgaaaagag |
13343795 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| ||||||| | ||||||||| | ||||||||||| ||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
13343794 |
gttccaaacctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtagttgatttggttaagcaaatcctcagcatcatag |
13343695 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| ||||| | ||||||||||||||||| | ||||||| ||||||||||| |
|
|
| T |
13343694 |
attgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttatgttctgcatcatccagcaccgcctgaagagcgagcagtgttg |
13343595 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
13343594 |
ttt |
13343592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 415
Target Start/End: Complemental strand, 13170935 - 13170534
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| ||||||||||| || ||||| |||||||||||||||| |||||||||||| ||||| | ||||| || ||| ||||||||| | ||| |
|
|
| T |
13170935 |
tctctttatcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaag |
13170836 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | ||||||||||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||| | |||| || |
|
|
| T |
13170835 |
gatatctct-ctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggacatgaaaagag |
13170737 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| || |||| | ||||||||||| ||||| ||||| |||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
13170736 |
gttccaaacctgattagtcatgttttcagattgtatcttctccaccttacatcggagggagtcgtaattgatttggttaagcaaatcctcagcatcatag |
13170637 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||| || || | ||||||| ||||||||||| |
|
|
| T |
13170636 |
attgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatcaagaaccgcctgaagagcgagcagtgttg |
13170537 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
13170536 |
ttt |
13170534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10126845 - 10126775
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
71 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126845 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10126775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10184159 - 10184089
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
71 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184159 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10184089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10260615 - 10260545
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
71 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260615 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
10260545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10031920 - 10031850
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
71 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10031920 |
atgttcattattgtctctttgtcatccttcctacccaccatgagagattcatttaccactgaacttgaagg |
10031850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10663443 - 10663373
Alignment:
| Q |
1 |
atgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaagg |
71 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10663443 |
atgttcattattgtctctttgtcacccttcctacccaccatgagagattcatttaccactgaacttgaagg |
10663373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 10500455 - 10500385
Alignment:
| Q |
16 |
tctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaac |
86 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10500455 |
tctttatcatcattcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaac |
10500385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 416
Target Start/End: Complemental strand, 10517114 - 10516990
Alignment:
| Q |
292 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
391 |
Q |
| |
|
||||| || |||| ||||||||| |||||||||||||||| ||||||||||||||||| | ||| |||| ||| |||| |||||||||| |||||||| |
|
|
| T |
10517114 |
agcaaatcttcagaatcaaagattgcatctttcaagtcatcaagccattgtttgacaggaagatcattgaactgtttctgctctgcatcaaccagcacag |
10517015 |
T |
|
| Q |
392 |
cttgaagagtgagcagtgttgtttt |
416 |
Q |
| |
|
||||||||| | |||||||||||| |
|
|
| T |
10517014 |
cttgaagagcaaacagtgttgtttt |
10516990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 416
Target Start/End: Original strand, 11782422 - 11782546
Alignment:
| Q |
292 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
391 |
Q |
| |
|
||||| || ||||||||||| || |||||||||||||||| ||||||||||||||||| | ||| |||| ||| |||| |||||||||| |||||||| |
|
|
| T |
11782422 |
agcaaatcttcagcatcaaatattgcatctttcaagtcatcaagccattgtttgacaggaagatctttgaactgtttctgctctgcatcaaccagcacag |
11782521 |
T |
|
| Q |
392 |
cttgaagagtgagcagtgttgtttt |
416 |
Q |
| |
|
||||||||| | |||||||||||| |
|
|
| T |
11782522 |
cttgaagagcaaacagtgttgtttt |
11782546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10527237 - 10527168
Alignment:
| Q |
16 |
tctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaa |
85 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
10527237 |
tctttatcatcattcctacccacaatgacagattcatttaccactgaacttgaaggggttctacgagaaa |
10527168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 400
Target Start/End: Complemental strand, 10527024 - 10526877
Alignment:
| Q |
253 |
tccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcag |
352 |
Q |
| |
|
||||||||||| ||||| | |||||| |||||| | ||||| || ||||||||||| || |||||||||||||||| ||||||||||||||||| | |
|
|
| T |
10527024 |
tccaccttgcaccgcagagcatcgtagctgattaagtcaagcaaatcttcagcatcaaatattgcatctttcaagtcatgaagccattgtttgacaggaa |
10526925 |
T |
|
| Q |
353 |
gattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
| | ||| ||| |||| |||||||||| |||||||| ||||||||| |
|
|
| T |
10526924 |
ggtcagtgaactgtttctgctctgcatcaaccagcacagcttgaagag |
10526877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 401
Target Start/End: Complemental strand, 10126594 - 10126433
Alignment:
| Q |
240 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
339 |
Q |
| |
|
||||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || |||||| |
|
|
| T |
10126594 |
agcttgtttcttctccagcttgcatcgtagggcattgtagctgatttgattgagcaaatcctcagcatcatagattgcatcttttaaccgatccagccat |
10126495 |
T |
|
| Q |
340 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
401 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10126494 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10126433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 415
Target Start/End: Complemental strand, 10085735 - 10085611
Alignment:
| Q |
291 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcaca |
390 |
Q |
| |
|
|||||| || ||||||||||||| | |||||||||||| || |||||| ||||||||| ||||| ||||||||||||||| ||||||||| || ||| |
|
|
| T |
10085735 |
gagcaaatcttcagcatcaaagaaaacatctttcaagttatcaagccactgtttgacatggggattactgatctgcttctcctttgcatcatctagtaca |
10085636 |
T |
|
| Q |
391 |
acttgaagagtgagcagtgttgttt |
415 |
Q |
| |
|
| |||||| |||||| ||||||| |
|
|
| T |
10085635 |
gcctgaagattgagcatggttgttt |
10085611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 415
Target Start/End: Complemental strand, 10192655 - 10192531
Alignment:
| Q |
291 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcaca |
390 |
Q |
| |
|
|||||| || ||||||||||||| | |||||||||||| || |||||| ||||||||| ||||| ||||||||||||||| ||||||||| || ||| |
|
|
| T |
10192655 |
gagcaaatcttcagcatcaaagaaaacatctttcaagttatcaagccactgtttgacatggggattactgatctgcttctcctttgcatcatctagtaca |
10192556 |
T |
|
| Q |
391 |
acttgaagagtgagcagtgttgttt |
415 |
Q |
| |
|
| |||||| |||||| ||||||| |
|
|
| T |
10192555 |
gcctgaagattgagcatggttgttt |
10192531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 401
Target Start/End: Complemental strand, 10260364 - 10260203
Alignment:
| Q |
240 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
339 |
Q |
| |
|
||||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || | |||| |
|
|
| T |
10260364 |
agcttgtttcttctccagcttgcatcgtagggcattgtagctgattttattgagcaaatcctcagcatcatagattgcatcttttaaccgatccaaccat |
10260265 |
T |
|
| Q |
340 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
401 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10260264 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10260203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 10541600 - 10541492
Alignment:
| Q |
292 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
391 |
Q |
| |
|
||||| || |||||||||||||| |||||||||||||||| ||||||||| ||||||| | | | ||| ||| |||| |||||||||| |||||||| |
|
|
| T |
10541600 |
agcaaatcttcagcatcaaagattgcatctttcaagtcatcaagccattgcttgacaggaaggtcaatgaactgtttctgctctgcatcaaccagcacag |
10541501 |
T |
|
| Q |
392 |
cttgaagag |
400 |
Q |
| |
|
|||||||| |
|
|
| T |
10541500 |
attgaagag |
10541492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 401
Target Start/End: Complemental strand, 10031669 - 10031508
Alignment:
| Q |
240 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
339 |
Q |
| |
|
||||||| | ||||||| ||||||||| | || || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || | |||| |
|
|
| T |
10031669 |
agcttgtttcttctccagcttgcatcgtatggcattgtagctgatttgattgagcaaatcctcagcatcatagattgcatcttttaaccgatccaaccat |
10031570 |
T |
|
| Q |
340 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
401 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10031569 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10031508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 401
Target Start/End: Complemental strand, 10183904 - 10183744
Alignment:
| Q |
241 |
gcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccatt |
340 |
Q |
| |
|
|||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||| ||| |||||||||||| |||| |||||||| || || | ||||| |
|
|
| T |
10183904 |
gcttgtttcttctccatcttgcatcgtagggcattgtagctgatttgattgaacaaatcctcagcatcatagattgcatcttttaaccgatccaaccatt |
10183805 |
T |
|
| Q |
341 |
gtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
401 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10183804 |
gtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10183744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 421
Target Start/End: Complemental strand, 3884757 - 3884670
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttgagct |
421 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||||||||| ||||||| || |||| |||||||| | | ||||||| |||| |||| |
|
|
| T |
3884757 |
agccattctttgacagcagggttggtgatttgcttctcctcagcatcattcaacacagcttgaagacttaacagtgttattttcagct |
3884670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 349
Target Start/End: Complemental strand, 10500204 - 10500146
Alignment:
| Q |
291 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacag |
349 |
Q |
| |
|
|||||| || |||||||||||||| | ||||||||||||| ||||||||||||||||| |
|
|
| T |
10500204 |
gagcaaatcttcagcatcaaagattgtgtctttcaagtcatcaagccattgtttgacag |
10500146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 11782173 - 11782235
Alignment:
| Q |
16 |
tctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttcta |
78 |
Q |
| |
|
||||| ||||| ||||||||||||| | |||||| ||||| ||||||||||||||| |||||| |
|
|
| T |
11782173 |
tctttatcatcattcctacccaccacgtcagattgatttagcactgaacttgaaggggttcta |
11782235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 4080909 - 4080970
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttg |
395 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||||||||||| ||||||| ||| ||| |||| |
|
|
| T |
4080909 |
agccattgcttgacagcagggttggtgatctgcttctcctcagcatcattcagtacagcttg |
4080970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 4115785 - 4115853
Alignment:
| Q |
343 |
ttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
411 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| ||||||| ||| ||| |||||||| | ||||||||| |
|
|
| T |
4115785 |
ttgacagcaggattagtgatctgtttctcctcagcatcattcagtacagcttgaagactcagcagtgtt |
4115853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 10517363 - 10517301
Alignment:
| Q |
16 |
tctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttcta |
78 |
Q |
| |
|
||||| ||||| ||||||||||||| | |||||||||||| ||| ||||||||| | |||||| |
|
|
| T |
10517363 |
tctttatcatcattcctacccaccacgtcagattcatttagcaccgaacttgaaagggttcta |
10517301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 4061301 - 4061378
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
411 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||||||| ||||||| || ||| |||| ||| | ||||||||| |
|
|
| T |
4061301 |
agccatttcttgacagcagggttggtgatctgcttctcctcagcatcatgaagtacagcttgcagactcagcagtgtt |
4061378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 4129298 - 4129233
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
399 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||| |||||||| ||||||| || ||| |||||||| |
|
|
| T |
4129298 |
agccattgcttgacagcagggttggtgatctgtttctcctcagcatcatgaagtacagcttgaaga |
4129233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 4140999 - 4140922
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
411 |
Q |
| |
|
||||||| ||| |||||||||||| |||| || |||||||| ||||||| || ||| |||||||| | ||||||||| |
|
|
| T |
4140999 |
agccattctttaacagcaggattggtgatttgtttctcctcagcatcatgaagtacagcttgaagactcagcagtgtt |
4140922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 22 - 426
Target Start/End: Original strand, 49981 - 50382
Alignment:
| Q |
22 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatctt |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49981 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatctt |
50080 |
T |
|
| Q |
122 |
ttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaagttccacac |
221 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||| |||| ||||||| ||| |
|
|
| T |
50081 |
ttcttttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctccatagt---ttttaaaagaagatgaaaagaagttcatcac |
50177 |
T |
|
| Q |
222 |
ctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatct |
321 |
Q |
| |
|
||||| | |||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
50178 |
ctgataaattttgctttgagcttttgcattctccaccttgcatcgcagggaatcataactgatttcgctgagcaagtcctcagcatcaaagacagcatct |
50277 |
T |
|
| Q |
322 |
ttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttgagct |
421 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
50278 |
ttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctcagcatcatccagcacaacttgaagagtgagaagtgttgttttcagct |
50377 |
T |
|
| Q |
422 |
gcctc |
426 |
Q |
| |
|
||||| |
|
|
| T |
50378 |
gcctc |
50382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 4 - 426
Target Start/End: Complemental strand, 26906811 - 26906389
Alignment:
| Q |
4 |
ttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagttt |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||| |
|
|
| T |
26906811 |
ttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctagcacttttagttt |
26906712 |
T |
|
| Q |
104 |
gcaaacgaagtatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggaga |
203 |
Q |
| |
|
|||||| ||| |||||||| | | |||| | |||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
26906711 |
gcaaaccaaggatatctttatgttgtgcaaacaattgcaggctttcacacattatcttcatttgagaattgatctctctgtagaagctattaaaaggaga |
26906612 |
T |
|
| Q |
204 |
agaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctca |
303 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
26906611 |
tgaaaggaagttcaacacctgattagttttgttttgagcttgtgtattctcgactttgcatcgcagggaatcataactaatttcgttgagcaagtcctca |
26906512 |
T |
|
| Q |
304 |
gcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtga |
403 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |
|
|
| T |
26906511 |
acatcaaagatagcatctttcaagtcatcaagccattgtttgacagcaggattgttgatctgtttctcctctgcatcatccagcacaacctgcagagtga |
26906412 |
T |
|
| Q |
404 |
gcagtgttgttttgagctgcctc |
426 |
Q |
| |
|
||||||||||||| ||||||||| |
|
|
| T |
26906411 |
gcagtgttgtttttagctgcctc |
26906389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 157; Significance: 3e-83; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 28 - 404
Target Start/End: Original strand, 44957888 - 44958264
Alignment:
| Q |
28 |
ttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatcttttctct |
127 |
Q |
| |
|
||||| |||||||| | ||||||||| ||| |||||||||||||||||||| | ||||| || | |||||||||| ||||| || ||||||||| || |
|
|
| T |
44957888 |
ttcctgcccaccataatagattcattaacccctgaacttgaaggtgttctatgagaaactctagcacttttagtttccaaaccaattatatctttatgct |
44957987 |
T |
|
| Q |
128 |
tttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaagttccacacctgatt |
227 |
Q |
| |
|
| |||||||||||||| ||||||||| |||||||| || ||||||||||||| ||||||| | ||||||||||| |||||||||||||| |||||||| |
|
|
| T |
44957988 |
gtgcaaaaagttgcagggattcacacataatcttcatttgagaattgatctctccatagaagtttttaaaaggagatgaaaggaagttccagacctgatt |
44958087 |
T |
|
| Q |
228 |
agttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaag |
327 |
Q |
| |
|
|||||| || | |||||||||||||||| ||||| ||||||||||| || || |||| |||||||| ||||| |||||||| || | || ||||||| |
|
|
| T |
44958088 |
agttttgttggcaacttgtgtattctccactttgcaacgcagggaatcatagctaatttggttgagcaaatcctcggcatcaaatattgtatttttcaag |
44958187 |
T |
|
| Q |
328 |
tcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgag |
404 |
Q |
| |
|
|||| ||||||||||||||||| | | ||| |||| |||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
44958188 |
tcatcaagccattgtttgacagtaaggttggtgatttgcttctcctctgcatcatcaagcacaacctgaagagtgag |
44958264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 415
Target Start/End: Complemental strand, 11484685 - 11484520
Alignment:
| Q |
250 |
ttctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacag |
349 |
Q |
| |
|
||||| ||||||||||||| || ||| || ||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
11484685 |
ttctctaccttgcatcgcaaggcatcatagctgatttcattaagcaaatcctcagcatcaaagattgcatctttcaaccgatcaagccattgtttgattt |
11484586 |
T |
|
| Q |
350 |
caggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
415 |
Q |
| |
|
|| | |||||||||||| ||||||||||| |||||||| | ||||| || |||||||||| |
|
|
| T |
11484585 |
tgggttgaaggatctgcttctcttctgcatcatcaagcacaacctcaagagcaagtagtgttgttt |
11484520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 11484904 - 11484846
Alignment:
| Q |
28 |
ttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaac |
86 |
Q |
| |
|
||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |
|
|
| T |
11484904 |
ttccttcccaccataacagattcattcaccactgaacttgatggtgttctacgagaaac |
11484846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 415
Target Start/End: Original strand, 146104 - 146505
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| | ||||| || ||| ||||||||| | ||| |
|
|
| T |
146104 |
tctctttatcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaag |
146203 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | ||||||||||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||||| |||| || |
|
|
| T |
146204 |
gatatctct-ctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggagatgaaaagag |
146302 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| ||||||| | ||||||||| | ||||||||||| |||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
146303 |
gttccaaacctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtaattgatttggttaagcaaatcctcagcatcatag |
146402 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
146403 |
attgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaagagcgagcagtgttg |
146502 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
146503 |
ttt |
146505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 415
Target Start/End: Original strand, 136053 - 136454
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| ||||||||||| || ||||| |||||||||||||||| |||||||||||| ||||| | ||||| || ||| ||||||||| | ||| |
|
|
| T |
136053 |
tctctttatcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcccgctcacagtttgcaagccaag |
136152 |
T |
|
| Q |
114 |
tatatcttttctctttt-caaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaa |
212 |
Q |
| |
|
|||||| | || || | ||||||||||||| |||| |||||| |||||||| || ||||||||||||| ||||| | ||||||||| | |||| || |
|
|
| T |
136153 |
gatatctct-ctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaaggacatgaaaagag |
136251 |
T |
|
| Q |
213 |
gttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaag |
312 |
Q |
| |
|
|||||| ||||||||||| | |||| || |||| | ||||||||||| ||||| ||||| |||||| |||||| || ||||| |||||||||||| || |
|
|
| T |
136252 |
gttccaaacctgattagtcatgttttcagattgtatcttctccaccttacatcggagggagtcgtaattgatttggttaagcaaatcctcagcatcatag |
136351 |
T |
|
| Q |
313 |
atagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttg |
412 |
Q |
| |
|
|| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||| || || | ||||||| ||||||||||| |
|
|
| T |
136352 |
attgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatcaagaaccgcctgaagagcgagcagtgttg |
136451 |
T |
|
| Q |
413 |
ttt |
415 |
Q |
| |
|
||| |
|
|
| T |
136452 |
ttt |
136454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 14 - 413
Target Start/End: Original strand, 31679898 - 31680303
Alignment:
| Q |
14 |
tctctttgtcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaag |
113 |
Q |
| |
|
||||||| ||| ||||||||| ||||||| ||||| || ||| | ||||||||||||||||||| | ||||||| ||| ||||||||| | ||| |
|
|
| T |
31679898 |
tctctttatcactcttcctaccaaccatgaaagattgatctactagtgaacttgaaggtgttctaagaaaaaccctaccacttacagtttgcaacccaag |
31679997 |
T |
|
| Q |
114 |
tatatcttttctcttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaag |
213 |
Q |
| |
|
||||||||| | | |||||||||| || |||||| ||| ||||||| |||||||||||||||| ||| ||| | | ||||||||| |||||||| |
|
|
| T |
31679998 |
gatatctttttgttgtgcaaaaagttggagcctttcaatcatactcttcatttgggaattgatctctccatacaagttttgaaaaggagatgaaaggaaa |
31680097 |
T |
|
| Q |
214 |
ttccacacctgattagttttattttgagcttgtgtatt------ctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcat |
307 |
Q |
| |
|
||||| |||||| ||| | |||| |||||||||||| ||||||||||| || ||| |||| |||||||| | |||||||| |||||||||| |
|
|
| T |
31680098 |
ttccaaacctgaccagtgatgttttcagcttgtgtattactattctccaccttgcttctaaggcaatcataactgatctggttgagcaaatcctcagcat |
31680197 |
T |
|
| Q |
308 |
caaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcag |
407 |
Q |
| |
|
|| | || ||||||||||| |||| ||||||||||||||||| | |||||||||||||||||| ||| |||||||| || ||| | ||||||||||| || |
|
|
| T |
31680198 |
catatattgcatctttcaactcatcaagccattgtttgacaggaagattgttgatctgcttcttctcagcatcatcaagaacagcatgaagagtgagaag |
31680297 |
T |
|
| Q |
408 |
tgttgt |
413 |
Q |
| |
|
|||||| |
|
|
| T |
31680298 |
tgttgt |
31680303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 415
Target Start/End: Complemental strand, 29836321 - 29836176
Alignment:
| Q |
270 |
ggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttc |
369 |
Q |
| |
|
|||||||||||| |||| || ||||| ||||| | |||| |||| |||||||| || ||||||||||||| | |||||| |||| | |||||||||| |
|
|
| T |
29836321 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
29836222 |
T |
|
| Q |
370 |
tcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
415 |
Q |
| |
|
|||||||||| | ||||| ||| ||||||||| |||||||||| |
|
|
| T |
29836221 |
ctctctgcatcaactagcaccgcttcaagagtgagaagtgttgttt |
29836176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 400
Target Start/End: Original strand, 17853378 - 17853471
Alignment:
| Q |
307 |
tcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
400 |
Q |
| |
|
||||||||||| |||||||| |||| ||||||||||||||||| | ||| ||||| || |||| ||||||||| |||||||| ||||||||| |
|
|
| T |
17853378 |
tcaaagatagcgtctttcaaatcatcaagccattgtttgacaggaagatcgttgaattgtttctgttctgcatcaaccagcacagcttgaagag |
17853471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 17853120 - 17853184
Alignment:
| Q |
22 |
tcatccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaac |
86 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
17853120 |
tcatcattccttcctaccatgacagattcatttaccacggaacttgaaggggttctacgagaaac |
17853184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 421
Target Start/End: Original strand, 14005939 - 14006026
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttgagct |
421 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||||||||| ||||||| || |||| |||||||| | | ||||||| |||| |||| |
|
|
| T |
14005939 |
agccattctttgacagcagggttggtgatttgcttctcctcagcatcattcaacacagcttgaagacttaacagtgttattttcagct |
14006026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 13932725 - 13932648
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
411 |
Q |
| |
|
|||||||| || |||||||| ||| |||||||||||||||| ||||||| || ||| |||| ||| | ||||||||| |
|
|
| T |
13932725 |
agccattgcttaacagcagggttggtgatctgcttctcctcagcatcatgaagtacagcttgtagactcagcagtgtt |
13932648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 18025 - 17960
Alignment:
| Q |
334 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
399 |
Q |
| |
|
|||||||| ||||||||||||||| |||| || ||||| || ||||||| ||| ||| |||||||| |
|
|
| T |
18025 |
agccattgcttgacagcaggattggtgatttgtttctcttcagcatcattcagtacagcttgaaga |
17960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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