View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9286_high_9 (Length: 318)
Name: NF9286_high_9
Description: NF9286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9286_high_9 |
 |  |
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| [»] scaffold0090 (1 HSPs) |
 |  |  |
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| [»] scaffold0073 (2 HSPs) |
 |  |  |
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| [»] scaffold0118 (1 HSPs) |
 |  |  |
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| [»] scaffold0107 (1 HSPs) |
 |  |  |
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| [»] scaffold0003 (1 HSPs) |
 |  |  |
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| [»] scaffold1139 (1 HSPs) |
 |  |  |
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| [»] scaffold0134 (1 HSPs) |
 |  |  |
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| [»] scaffold0225 (1 HSPs) |
 |  |  |
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| [»] scaffold0262 (1 HSPs) |
 |  |  |
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| [»] scaffold0017 (1 HSPs) |
 |  |  |
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| [»] scaffold0550 (1 HSPs) |
 |  |  |
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| [»] scaffold0356 (1 HSPs) |
 |  |  |
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| [»] scaffold0002 (2 HSPs) |
 |  |  |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 5 - 316
Target Start/End: Original strand, 37261816 - 37262127
Alignment:
| Q |
5 |
ggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacag |
104 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37261816 |
ggatcattcctagacatgatatcgcgcattgatcagtcaacttcctcaaaacaccatcaatgcatcattggagcctcatcccaaattatcaactttacag |
37261915 |
T |
 |
| Q |
105 |
cacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc |
204 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37261916 |
cacgcaccaggtctgtcctaggactatccttttccatcgtaagcaatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc |
37262015 |
T |
 |
| Q |
205 |
actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccatgtaattaacc |
304 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37262016 |
actggtaatagaagagccgttataccgctggatgcagcatttaatacaattaacccttttgatctaacaacagccgacaatgttttccatgtaattaacc |
37262115 |
T |
 |
| Q |
305 |
cctttaaaaagt |
316 |
Q |
| |
|
|||||||||||| |
|
|
| T |
37262116 |
cctttaaaaagt |
37262127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 8428292 - 8428001
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
8428292 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
8428193 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
8428192 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
8428093 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||| ||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
8428092 |
cacctggtaatagaagagccgttataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
8428001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 37373448 - 37373739
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |
|
|
| T |
37373448 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagtctcatcccaaattatcaactttgca |
37373547 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
37373548 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcatggagtgcgcggttcttc |
37373647 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || |||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
37373648 |
cacctggtaatagaagagccgctataccgttggatgcaacattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
37373739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 25542500 - 25542213
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
25542500 |
gggatcattcttggacatgatatcacgcattaatcggtcaacttcctcaaaacaccatcagtgcatcattggagcctcatcttaaattatcaactttgca |
25542401 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
25542400 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactatcagcgtcgagtatgcggttcttc |
25542302 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|| ||||||||||||||| | |||||| ||||| || |||| |||||||||||||| || | |||||||||| |||||||||||||| |
|
|
| T |
25542301 |
cacctggtaatagaagagtcactataccgctggatgcatcattcaatacaattaaccccttcggtctaacaacagccgacaatgttttc |
25542213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 3690489 - 3690780
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | || ||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |
|
|
| T |
3690489 |
gggatcattcttggatatgatatcatgcattgattggtcaactgcctcaaaacaccatcggttcatcattggagcctcatcccaaattatcaactttgca |
3690588 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
3690589 |
gcaggcaccaggtctgccctaggactatccttttccatcgtaagtgatgatgcctcattaatctcaatagggactgttagcatcgagtgcgcggttcttc |
3690688 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| || |||| |||| || |||| ||||||||||||||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
3690689 |
cacctggtaatagaagagtcgttatatctctggatgcaacattcaatacaattaaccctttcgatctaacaacaactgacaatgttttccat |
3690780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 34 - 294
Target Start/End: Original strand, 39883717 - 39883978
Alignment:
| Q |
34 |
tgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggtctgccctaggactatcc |
133 |
Q |
| |
|
||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
39883717 |
tgatcggtcagctgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcagctttgcagcacgcaccaggtctgccttaggactatcc |
39883816 |
T |
 |
| Q |
134 |
ttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctatactgc |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
39883817 |
ttttccatcgtaagcgatgatgcctcattaatctcaataaggactatcagcgtcgagtgcgcggttcttccacctggtaatagaagagccgctataccgc |
39883916 |
T |
 |
| Q |
233 |
tggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
||| || | ||| |||||||||||| | || ||||||||| || ||||||||||||||||| |
|
|
| T |
39883917 |
tggatgcagtattcaatacaattaactcattcgatctaacagcagccgacaatgttttccat |
39883978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 3876298 - 3876007
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | || ||||||||| |||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||||||| || |
|
|
| T |
3876298 |
gggatcattcttggatatgatatcatgcattgattggtcaactgcctcaaaacatcatcggttcatcattggagcctcatcccaaattatcaactttgca |
3876199 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
3876198 |
gcaggcaccaggtctgccctaggactatccttttccatcgtaagtgatgatgcctcattaatctcaatagggactgttagcatcgagtgcgcggttcttc |
3876099 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| || |||| |||| || |||| ||||||||||||||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
3876098 |
cacctggtaatagaagagtcgttatatctctggatgcaacattcaatacaattaaccctttcgatctaacaacaactgacaatgttttccat |
3876007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 27881596 - 27881887
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
27881596 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
27881695 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
27881696 |
gcacgcatcaggtttgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
27881795 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||| ||||||||||| || | |||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
27881796 |
cacctggtaatagaaaagccgctataccatcggatacaacattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
27881887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 290
Target Start/End: Complemental strand, 14192518 - 14192232
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||| | | ||||||||||||||||||| |||||||||||||||| |||||||||||||| || |
|
|
| T |
14192518 |
gggatcattcttggacatgatatcacgcattgatcggtcaattgcttcaaaacaccatcggtgca-cattggagcctcatcccaaattatcaactttgca |
14192420 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||| || |
|
|
| T |
14192419 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagtgatgatgcctaattaatctcaatagggtatgtcagtgtcgagtgcgcggttgttt |
14192320 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgtttt |
290 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||| | ||||||||||||||||||| || ||||||||| || ||||||||||||| |
|
|
| T |
14192319 |
cacctggtaatagaagagccgttataccgctggatacaacatttaatacaattaaccccttcgatctaacagcaaccgacaatgtttt |
14192232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 30346336 - 30346049
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
||||||| || | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||||| |||||||||||||| || |
|
|
| T |
30346336 |
gggatcaatcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcaatggagtctcatcccaaattatcaactttgca |
30346237 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30346236 |
gcacgcatcaggtctgccctaggactatccttttccatcgtaagtgatgatgcctca-taatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
30346138 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| |||||||||||||| || ||||||||| || ||||| |||||||| |
|
|
| T |
30346137 |
ctcctggtaatagaagagtcattataccgctagatgcagcattcaatacaattaaccccttcgatctaacagcagccgactatgttttc |
30346049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 4 - 291
Target Start/End: Original strand, 10025490 - 10025777
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
10025490 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
10025589 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | ||||||| |||||||||| |
|
|
| T |
10025590 |
gcacgcactaggtctgccccaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggaccgtcaacttcgagtgtgcggttcttc |
10025688 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| |||||||||||||| || ||||||| | || |||||||||||||| |
|
|
| T |
10025689 |
cttctggtaatagaagagtcattataccgctagatgcagcattcaatacaattaaccccttcgatctaatagcagccgacaatgttttc |
10025777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 24629660 - 24629444
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| | ||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
24629660 |
gggatcattcttggacatgatatcacgcattgatcggccaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
24629561 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
24629560 |
gcacgcatcaggtcttccctaggactatccttttccatcgtaagcgatgatgcctca-taatcttaatagggactgtcagcgtcgagtgtgcggttcttc |
24629462 |
T |
 |
| Q |
204 |
c-actggtaatagaagag |
220 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
24629461 |
ctcctggtaatagaagag |
24629444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 17871345 - 17871127
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||| | |
|
|
| T |
17871345 |
gggatcattcttggacatgatat-acgcattgatcgatcaactgcctcaaaacaccatcggtgcatcattggagcctcattccatattatcaacttttct |
17871247 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17871246 |
acatgcaccatgtcttccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
17871147 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagcc |
222 |
Q |
| |
|
|| | ||||| ||||||||| |
|
|
| T |
17871146 |
caccaggtaagagaagagcc |
17871127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 10039139 - 10039443
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||| ||| |
|
|
| T |
10039139 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaagaccat-----------tggagccccatcccaaattatcaatttt |
10039227 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
200 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10039228 |
acagtacgcaccaggtctgccctatgactatccttctccagcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
10039327 |
T |
 |
| Q |
201 |
ttccactggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccatgtaatt |
300 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10039328 |
ttccactggtaatagaagagctgttataccgctggatgcagcatttaatacaattaacctttttcatctaacaacagccgacaatgttttccatgtaatt |
10039427 |
T |
 |
| Q |
301 |
aacccctttaaaaagt |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10039428 |
aacccctttaaaaagt |
10039443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 33283 - 33574
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| | || |
|
|
| T |
33283 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcatcggagcctcatcccaaattatcaactatgca |
33382 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
33383 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
33482 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || |||| |||||||||||||| || ||||||||| | |||||||| |||||||| |
|
|
| T |
33483 |
cacctggtaatagaagagccgctatacggttggatgcaacattcaatacaattaacccattcgatctaacagtagccgacaatcttttccat |
33574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 50410680 - 50410971
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
50410680 |
gggatcattcttggacatgatatcacacattgatcggtcaactgcctcaaaacaccattggtgcatcattggagcctcatcacaaattatcaactttgca |
50410779 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
50410780 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctccttaatctcaatagggattgctagtgtcgagtgcgcggttcttc |
50410879 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||| ||||||| ||||| || ||||| ||||||||||||||||| ||||||||| || |||||||||||||||| |
|
|
| T |
50410880 |
cacctggtaatagaagagctgctataccgctggatgcagcattcaatacaattaaccctttcgatctaacagcagtcgacaatgttttccat |
50410971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 293
Target Start/End: Original strand, 52918538 - 52918828
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
52918538 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
52918637 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
52918638 |
gcacgcaccaggtctaccctaggattatccttttccatcgtaagcgatgacggctcattaatctcaataaggactgtcagcgtcgagtgcgcggttcttc |
52918737 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttcca |
293 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||| || |||| |||||||||||||| || |||||||||||| ||||||| ||||||| |
|
|
| T |
52918738 |
cacctggtaatagaagagccgatataccgctggatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaaacttttcca |
52918828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 4 - 290
Target Start/End: Complemental strand, 10968489 - 10968202
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
10968489 |
gggatcattcttggacctgatatcatgcattgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
10968390 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10968389 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtcgagtgcgcagttcttc |
10968290 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgtttt |
290 |
Q |
| |
|
|| |||||||||||| || |||||||| | ||| || ||||| |||||||||||||| || ||||||| | || |||||||| |||| |
|
|
| T |
10968289 |
cacctggtaatagaatagtcgctataccgttggatgcagcattcaatacaattaaccccttcgatctaatatcagccgacaatctttt |
10968202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 13530551 - 13530842
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||| ||||||||||| ||||||| ||||||||||||| |||| ||||| ||||||| |||| |||||||||||||| || |
|
|
| T |
13530551 |
gggatcattcttggacatgatatgacgcattgatcggtcaactgtctcaaaacaccattggtgtatcatcggagccttatcccaaattatcaactttgca |
13530650 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
13530651 |
gcacgcaccaggtctgccctaggactatccttttctatcgtaagcgatgatgcctcattaatctcaatagggactatcagtgtcgagtgcacggttcttt |
13530750 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| | |||||||||||| || ||||| |||||||||||||| || || ||||||| | ||||||||||||||||| |
|
|
| T |
13530751 |
cacctggtaatagaagagtcactatactgctggatgcagcattcaatacaattaaccccttcgagctaacaatagccgacaatgttttccat |
13530842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 11369151 - 11369441
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | || ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
11369151 |
gggatcattcttggatatgatatcatgcattgattggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgaa |
11369250 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |
|
|
| T |
11369251 |
gcatgcaccaggtctg-cctaggactatccttttccatcttaagcgatgatgcctcattaatctcaacagggactgttagcgtcgagtgcacggttcttc |
11369349 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| || ||||| ||||| || |||| |||||||||||||| || ||||||||| || | ||||||||||||||| |
|
|
| T |
11369350 |
cacctggtaatagaagagtcgatataccgctggatgcaacattcaatacaattaaccccttcgatctaacagcaactgacaatgttttccat |
11369441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 7 - 291
Target Start/End: Original strand, 10000922 - 10001206
Alignment:
| Q |
7 |
atcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagca |
106 |
Q |
| |
|
||||||| | ||||||||| ||| |||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
10000922 |
atcattcttggacatgataccacacattgatcggtcaactgcctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagca |
10001021 |
T |
 |
| Q |
107 |
cgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc-a |
205 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10001022 |
cgcaccaagtctgccctaggactatccttttccatcgtaagagatgattcctca-taatctcaacagggactgtcagcgtcgagtgtgcggttcttcctc |
10001120 |
T |
 |
| Q |
206 |
ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
||| ||||||||||| | |||||| ||| | || |||| |||| ||||||||| || |||||||||||| ||||||||||||| |
|
|
| T |
10001121 |
ctgctaatagaagagtcactataccgctagatgcaacattcaatataattaaccccttcgatctaacaacagtcgacaatgttttc |
10001206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 7 - 291
Target Start/End: Original strand, 10111115 - 10111399
Alignment:
| Q |
7 |
atcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagca |
106 |
Q |
| |
|
||||||| | ||||||||| ||| |||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
10111115 |
atcattcttggacatgataccacacattgatcggtcaactgcctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagca |
10111214 |
T |
 |
| Q |
107 |
cgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc-a |
205 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10111215 |
cgcaccaagtctgccctaggactatccttttccatcgtaagagatgatgcctca-taatctcaatagggactgtcagcgtcaggtgtgcggttcttcctc |
10111313 |
T |
 |
| Q |
206 |
ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
||| ||||||||||| | |||||| ||| | || |||| |||||||||||||| || ||||||||| || ||||||||||||| |
|
|
| T |
10111314 |
ctgctaatagaagagtcactataccgctagatgcaacattcaatacaattaaccccttcgatctaacagcagtcgacaatgttttc |
10111399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 10238069 - 10238194
Alignment:
| Q |
7 |
atcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagca |
106 |
Q |
| |
|
||||||||| ||||||||| ||| |||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
10238069 |
atcattcctggacatgataccacacattgatcggtcaactgcctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagca |
10238168 |
T |
 |
| Q |
107 |
cgcaccaggtctgccctaggactatc |
132 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
10238169 |
cgcaccaggtctgccctaggactatc |
10238194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 10244920 - 10245084
Alignment:
| Q |
127 |
actatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc-actggtaatagaagagccgct |
225 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| | || |
|
|
| T |
10244920 |
actatccttttacatcgtaagagatgatgcctcat-aatctcaatagggactgtcagcgtcgagtgtgcggttcttcctcctgctaatagaagagtcact |
10245018 |
T |
 |
| Q |
226 |
atactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|||||||| | || |||| |||||||||||||| || ||||||||| || |||||||||||||| |
|
|
| T |
10245019 |
atactgctagatgcaacattcaatacaattaaccccttcgatctaacagcagccgacaatgttttc |
10245084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 10250418 - 10250523
Alignment:
| Q |
153 |
atgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctatactgctggttgatgcatttaatac |
251 |
Q |
| |
|
||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||||||||| ||||| ||||| || ||||| ||||| |
|
|
| T |
10250418 |
atgcctcattaatatcaatagggactgttagtgtcgagtgcgcggttcttcgacctggtaatagaagagccgttataccgctggatgtagcattcaatac |
10250517 |
T |
 |
| Q |
252 |
aattaa |
257 |
Q |
| |
|
|||||| |
|
|
| T |
10250518 |
aattaa |
10250523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 10113314 - 10113396
Alignment:
| Q |
153 |
atgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctatactgctg |
234 |
Q |
| |
|
||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||||||||| ||||| |||| |
|
|
| T |
10113314 |
atgcctcattaatatcaatagggactgttagtgtcgagtgcgcggttcttcgacctggtaatagaagagccgttataccgctg |
10113396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 27275059 - 27275130
Alignment:
| Q |
149 |
gatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc-actggtaatagaagag |
220 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
27275059 |
gatgatgcctcat-aatcttaatagggactgtcagcgtcgagtgtgcggttcttcctcctggtaatagaagag |
27275130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 10013718 - 10013823
Alignment:
| Q |
153 |
atgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctatactgctggttgatgcatttaatac |
251 |
Q |
| |
|
||||||||||||| |||||||||||| | || ||||| ||||||||||||| | ||||||||||||||| | ||||| ||||| || ||||| ||||| |
|
|
| T |
10013718 |
atgcctcattaatatcaatagggactattagtgtcgaatgcgcggttcttcgacctggtaatagaagagtcattataccgctggatgcagcattcaatac |
10013817 |
T |
 |
| Q |
252 |
aattaa |
257 |
Q |
| |
|
|||||| |
|
|
| T |
10013818 |
aattaa |
10013823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 25218272 - 25217981
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
25218272 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
25218173 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
25218172 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
25218073 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
25218072 |
cacctggtaatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
25217981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 30325987 - 30326278
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
30325987 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
30326086 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||| |
|
|
| T |
30326087 |
gcatgcaccaggtctgccctaggactatcattttccatcgtaagcgatgacgcctcattaatctcaatagggactatcggcgtggagtgcgcggttcttc |
30326186 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | | | || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
30326187 |
cacctggtaatagaagagccgctataccgttagatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
30326278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 7822350 - 7822633
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
7822350 |
gggatcatttttggacatgatatcatgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
7822449 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
7822450 |
gcacgcaccaggtctgccctaggactatcctctttcatcgcaagcgatgacgcctcattaatctcaatagggactgtcagcgt------cgtggttcttc |
7822543 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttcc |
292 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||| || ||||| |||||||||||||| || ||||||||| || ||||||||||||||| |
|
|
| T |
7822544 |
cacctggtaatagaagagccgttatactgctggatgcagcattcaatacaattaacccattcgatctaacagcaaccgacaatgttttcc |
7822633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 21113451 - 21113164
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| || |||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
21113451 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgccgcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
21113352 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
21113351 |
gcacgcaccaggtctgtcctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactgtcaacgtcgagtgtgcggttcttc |
21113253 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| |||||||||||| | || ||||||||| || |||||||||||||| |
|
|
| T |
21113252 |
ctcctggtaatagaagagtcattataccgctagatgcagcattcaatacaattaacgcattcgatctaacagcagccgacaatgttttc |
21113164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 25208754 - 25208466
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| | |
|
|
| T |
25208754 |
gggatcattcttggacatgatatcacacaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagtctcatcccaaattatcaactttgga |
25208655 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| |||||||||||| |
|
|
| T |
25208654 |
gcacgcatcaggtctgccctaggactttccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagcgcgcggttcttc |
25208555 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || |||| |||||||||||||| | ||||||||| | |||||||| ||||| |
|
|
| T |
25208554 |
cacctggtaatagaagagccgctataccgttggatgcaacattcaatacaattaaccccatcgatctaacagtagccgacaatcttttc |
25208466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 35856419 - 35856710
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
35856419 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
35856518 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
35856519 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
35856618 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
35856619 |
cacctggtaatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
35856710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 49710684 - 49710975
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
49710684 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcgatgcatcattggagcctcatcccaaattatcaactttgca |
49710783 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49710784 |
gcacgcacaaggtctgccctaggactatccttttgcatcttaagcgatgatgcctcgttaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
49710883 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| || ||||||||| || ||||||||||||||||| |
|
|
| T |
49710884 |
cacctggtaatagaagagccgctataccgctggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatgttttccat |
49710975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 13344447 - 13344738
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
13344447 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaccaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
13344546 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||| ||||||||| |
|
|
| T |
13344547 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactatcggcgtggagtgcacggttcttc |
13344646 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
13344647 |
cacctggtaatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
13344738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 49786559 - 49786268
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
49786559 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
49786460 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
49786459 |
gcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
49786360 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| || |||||||||||| |||||||| |||||||| |
|
|
| T |
49786359 |
cacctgataatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacaacagccgacaatcttttccat |
49786268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 55558830 - 55558543
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
55558830 |
gggatcatttttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
55558731 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
55558730 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
55558632 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || |||| |||| ||||||||| || ||||||||| || | |||||||||||| |
|
|
| T |
55558631 |
cttctggtaatagaagagtcattataccgctagatgcatcattcaatagaattaaccccttcgatctaacagcagcggacaatgttttc |
55558543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 13337747 - 13337936
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
13337747 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaccaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
13337846 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgc |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||| |
|
|
| T |
13337847 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactatcggcgtggagtgc |
13337936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 21395882 - 21396173
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
21395882 |
gggatcattcttggacatgatatcacgcaatgatcggtcaacagcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
21395981 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
21395982 |
gcacgcaccaagtctgccctaggactatcctttagcatcttaagcgatgatgcctcattaatctcaacagggactgtcagcgccgagtgcgcggttcttc |
21396081 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| || ||||||||| || ||||||||||||||||| |
|
|
| T |
21396082 |
cacctggtaatagaagagccgctataccgctggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatgttttccat |
21396173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 28665903 - 28665612
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
28665903 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
28665804 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28665803 |
gcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcagcgtggagtgcgcggttcttc |
28665704 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
28665703 |
cacctgataatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaattttttccat |
28665612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 37824737 - 37824446
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
37824737 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
37824638 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37824637 |
gcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcagcgtggagtgcgcggttcttc |
37824538 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
37824537 |
cacctgataatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaattttttccat |
37824446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 4 - 290
Target Start/End: Original strand, 24246337 - 24246622
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
24246337 |
gggatcattcttggacatgatatcacgtattgatcggtcaactgcctcaaaataccatcagtgcatcattggagcctcatc--aaattatcaactttgca |
24246434 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24246435 |
gcacgcaccaagtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
24246534 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgtttt |
290 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| || ||||||||| | | ||||||||||| |
|
|
| T |
24246535 |
cacctggtaatagaagagccgctataccgctggatgcagcattcaatacaattaaccccttcgatctaacattagctgacaatgtttt |
24246622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 41919904 - 41919613
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
41919904 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
41919805 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
41919804 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgttggcgtggagtgcgcggttcttc |
41919705 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
41919704 |
cacctgataatagaagagccgctataccattggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatcttttccat |
41919613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 27193001 - 27193291
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || |
|
|
| T |
27193001 |
gggatcattcttgtacatgatataacgcattgatcggtcaactgcctcaaagcaccatcggtgcatcattggagcctcatcccaaattatcaattttgca |
27193100 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||| ||||| |||||||||| |
|
|
| T |
27193101 |
gcacgcaccaggtcagccctaggactatccttttccatcataagcgatgatgcctcattaatctcaata-ggaatgtaagcgttgagtgtgcggttcttc |
27193199 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||| ||||||| ||||||| ||| | || ||||| |||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
27193200 |
cacctggtaattgaagagctgctataccgcttgatgcagcattcaatacaattaaccccttcgatctaacaacatccgacaatgttttccat |
27193291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 27842815 - 27843105
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || |
|
|
| T |
27842815 |
gggatcattcttgtacatgatataacgcattgatcggtcaactgcctcaaagcaccatcggtgcatcattggagcctcatcccaaattatcaattttgca |
27842914 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||| ||||| |||||||||| |
|
|
| T |
27842915 |
gcacgcaccaggtcagccctaggactatccttttccatcataagcgatgatgcctcattaatctcaata-ggaatgtaagcgttgagtgtgcggttcttc |
27843013 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||| ||||||| ||||||| ||| | || ||||| |||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
27843014 |
cacctggtaattgaagagctgctataccgcttgatgcagcattcaatacaattaaccccttcgatctaacaacatccgacaatgttttccat |
27843105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 27509886 - 27510177
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| || |
|
|
| T |
27509886 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcggtgcatcattgaagcctcatcctaaattatcaactttgca |
27509985 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| ||||||| ||||||||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
27509986 |
gcatgcaccagatctgccctaggtctgtccttttgcatcgtaagcaatgatgcctcattaatctcaatagggactgtcagtgtcgagtgcgaggttcttc |
27510085 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | | || ||| |||||||||||||| | |||||||||||| |||||||||||||||| |
|
|
| T |
27510086 |
cacctggtaatagaagagccgctataccaccagatgcaaaattcaatacaattaacccctccgatctaacaacagtcgacaatgttttccat |
27510177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 316
Target Start/End: Complemental strand, 17683594 - 17683307
Alignment:
| Q |
30 |
gcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggtctgccctaggact |
129 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
17683594 |
gcattgatgagtcaactgcctcaaaacaccattggtgcatcattagagcctcattccaaattatcaactttgcagcacgcaccaggtctgccctacgact |
17683495 |
T |
 |
| Q |
130 |
atccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttccac-tggtaatagaagagccgctata |
228 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||||||||| | || |||| ||||||||||||| || |||||||||||||| |||| |
|
|
| T |
17683494 |
atcctttttcatcgtaagcgatgatgcctcattaatctcgatagggactgtcaacatcaagtgtgcggttcttccacatgataatagaagagccgttata |
17683395 |
T |
 |
| Q |
229 |
ctgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccatgtaattaacccctttaaaaagt |
316 |
Q |
| |
|
| ||||| || |||| ||||||||| |||| || |||||||| | ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17683394 |
ccgctggctgcaacattcaatacaattcaccccttcaatctaacataagccgacaatgttttccatataattaacccctttaaaaagt |
17683307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 24268777 - 24268490
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
24268777 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcagtggagcctcatcccaaattatcaactttgca |
24268678 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24268677 |
gcatgcaccaggtctgtcctaggactatcattttccatcgtaagcgatgatgcctca-aaatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
24268579 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || |||| |||||||||||| | || ||||||||| || |||||||||||||| |
|
|
| T |
24268578 |
ctcctggtaatagaagagtcattataccgctagatgcaacattcaatacaattaactcattcgatctaacagcagccgacaatgttttc |
24268490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 290
Target Start/End: Original strand, 35610165 - 35610451
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||| ||||| | | ||||||||||||||||||| |||||||||||||||| |||||||||||||| || |
|
|
| T |
35610165 |
gggatcattcttggacatgatatcacgtattgatcggtcaattgcttcaaaacaccatcggtgca-cattggagcctcatcccaaattatcaactttgca |
35610263 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| || |||||||||||| ||||||||| || |
|
|
| T |
35610264 |
gcacgcaccaggtctgccttaggactatccttttccatcgtaagtgatgatgcctaattaatctcaataaggtatgtcagcgtcgactgcgcggttgttt |
35610363 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgtttt |
290 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||| | |||| |||||||||||||| || ||||||||| || ||||||||||||| |
|
|
| T |
35610364 |
cacctggtaatagaagagccgttataccgctggatacaacattcaatacaattaaccccttcgatctaacagcaaccgacaatgtttt |
35610451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 48667 - 48376
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
48667 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
48568 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
48567 |
gcacgcaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgcgcggttcttc |
48468 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
48467 |
cacctgataatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaattttttccat |
48376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 290
Target Start/End: Complemental strand, 9000852 - 9000565
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
9000852 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
9000753 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
9000752 |
gcacgcatcaggtctgccctaggactatccttttccatcttaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcagttctac |
9000653 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgtttt |
290 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| || ||||||||| || | || |||||||| |
|
|
| T |
9000652 |
cacctggtaatagaagagccgatataccgctggatgcagcattcaatacaattaacccattcgatctaacagcagctgataatgtttt |
9000565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 12785709 - 12785418
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
12785709 |
gggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
12785610 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12785609 |
gcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcagcgtggagtgcgcggttcttc |
12785510 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||| |||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
12785509 |
cacctgataatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaattttttccat |
12785418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 12780855 - 12780564
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| || ||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
12780855 |
gggatcattcttggacatgatatcaaacaatgatcggacaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgta |
12780756 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12780755 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacacctcattaatctcaatagggactgtcggcgtcgagtgcgcggttcttc |
12780656 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || |||| |||||||||||||| || |||||||||||| |||||||| |||||||| |
|
|
| T |
12780655 |
cacctggtaatagaagagccgctataccgttggatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaatcttttccat |
12780564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 4 - 291
Target Start/End: Original strand, 42232512 - 42232799
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
42232512 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
42232611 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42232612 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
42232710 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| |||||||||||||| || ||||||||| || |||||||||||||| |
|
|
| T |
42232711 |
cttctggtaatagaagagtcattataccgctagatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatgttttc |
42232799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 7037229 - 7037523
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||| | ||||||||||||| | ||||| ||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| |
|
|
| T |
7037229 |
taagggatcattcttgaacatgatatcacgtaatgatcggtcaactacctcaaaacaccattggtgcatcattggagcctcaccccaaattatcaacttt |
7037328 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
200 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
7037329 |
gcagcatgcattaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgtgcggttc |
7037428 |
T |
 |
| Q |
201 |
ttcca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
||||| |||||||||||||||||| ||||| | | | || |||| |||||||||||||| || |||||||||||| |||||||| |||||||| |
|
|
| T |
7037429 |
ttccacctggtaatagaagagccgttataccgtttgatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaatcttttccat |
7037523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 22844315 - 22844534
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
22844315 |
gggatcattcttggacatgatatcacgcattgatcgatcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgct |
22844414 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22844415 |
acatgcaccaggtcttccctaggactatccttttcaatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
22844514 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagcc |
222 |
Q |
| |
|
|| || |||| ||||||||| |
|
|
| T |
22844515 |
cacctagtaagagaagagcc |
22844534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 21069769 - 21069492
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| | | || | ||||||||||||||| | ||||||||||||||| | | |||||||||| ||| || |
|
|
| T |
21069769 |
gggatcattcttggacatgatatcacgcattgaccgatgaaatgcctcaaaacaccatcaatacatcattggagcctcgttcgaaattatcaagtttgca |
21069670 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
21069669 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactgtcatcgtcg-------ggttc--c |
21069580 |
T |
 |
| Q |
204 |
cactggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|||||||||||||| | |||||| ||||| || |||| |||||||||||||| || ||||||||| || ||||||||||||| |
|
|
| T |
21069579 |
acctggtaatagaagattcactataccgctggatgcaacattcaatacaattaaccccttcgatctaacagcaatcgacaatgttttc |
21069492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 5828262 - 5828174
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaatta |
92 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
5828262 |
gggatcattcttggacatgatatcacacattgatcgatcaactgcctcaaaacaccatcagtgcatcattggagcctcatcccaaatta |
5828174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 294
Target Start/End: Original strand, 12517787 - 12518077
Alignment:
| Q |
5 |
ggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacag |
104 |
Q |
| |
|
||||||||| | ||||||||||||| || ||||| |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
12517787 |
ggatcattcttggacatgatatcacacaatgatcggtcagctgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcag |
12517886 |
T |
 |
| Q |
105 |
cacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcc |
204 |
Q |
| |
|
||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12517887 |
cacgcaccatgcctgccctaggactatcattttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgtacggttcttcc |
12517986 |
T |
 |
| Q |
205 |
a-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| || |||| |||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
12517987 |
acctggtaatagaagagccgctatatcgctggatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaatgttttccat |
12518077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 30 - 316
Target Start/End: Original strand, 10188560 - 10188847
Alignment:
| Q |
30 |
gcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggtctgccctaggact |
129 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
10188560 |
gcattgatgagtcaactgcctcaaaacaccattggtgcatcattagagcctcattccaaattatcaactttgcagcacgcaccaggtctgccctacgact |
10188659 |
T |
 |
| Q |
130 |
atccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctata |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10188660 |
atccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcaacatcaagtgtgcggttcttccacctggtaatagaagagccgctata |
10188759 |
T |
 |
| Q |
229 |
ctgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccatgtaattaacccctttaaaaagt |
316 |
Q |
| |
|
| ||||| || |||| ||||||||| |||| || |||||||| | ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10188760 |
ccgctggctgcaacattcaatacaattcaccccttcaatctaacataagccgacaatgttttccatataattaacccctttaaaaagt |
10188847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 48 - 294
Target Start/End: Complemental strand, 2200561 - 2200314
Alignment:
| Q |
48 |
cctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggtctgccctaggactatccttttccatcgtaag |
147 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
2200561 |
cctcaaaacactatcggtgcatcattggagcctcattccaaattatcaactttgcagcacgcaccaggtctcccctaggactatctttttccatcgtaag |
2200462 |
T |
 |
| Q |
148 |
cgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaagagccgctatactgctggttgatgcattt |
246 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||| || ||||| | ||| || ||||| |
|
|
| T |
2200461 |
cgatgatgcctcattaatcttaatagggactgtcagcgtcgagtgcgcggttcttcaacctggtaatagtagagacgttataccgttggatgtagcattc |
2200362 |
T |
 |
| Q |
247 |
aatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|||||||||||||| || ||||||||| || ||||||||||||||||| |
|
|
| T |
2200361 |
aatacaattaaccccttcgatctaacagcagccgacaatgttttccat |
2200314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 30881838 - 30882056
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||| | |
|
|
| T |
30881838 |
gggatcattcttggacatgatat-acgcattgatcgatcaactgcctcaaaacaccatcggtgcatcattggagcctcattccatattatcaacttttct |
30881936 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30881937 |
acatgcaccaggtcttccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
30882036 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagcc |
222 |
Q |
| |
|
|| | ||||| ||||||||| |
|
|
| T |
30882037 |
caccaggtaagagaagagcc |
30882056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 18857227 - 18857339
Alignment:
| Q |
186 |
tcgagtgcgcggttcttccact-ggtaatagaagagccgctatactgctggttgatgcatttaatacaattaaccct---tttgatctaacaacacccga |
281 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||| ||||| ||| | || |||| |||||||||||||| || |||||||||||| | || |
|
|
| T |
18857227 |
tcgagtgcgaggttcttccacttggtaatagaagagccgttataccgctagatgcaacattcaatacaattaacccccccttcgatctaacaacagctga |
18857326 |
T |
 |
| Q |
282 |
caatgttttccat |
294 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18857327 |
caatgttttccat |
18857339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 15334016 - 15334096
Alignment:
| Q |
211 |
aatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|||||||||| | |||||| ||||| || |||| |||| ||||||||| || ||||||||| || |||||||||||||| |
|
|
| T |
15334016 |
aatagaagagtcactataccgctggatgcaacattcaataaaattaaccccttcgatctaacagcagccgacaatgttttc |
15334096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 16042537 - 16042831
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| || |||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |
|
|
| T |
16042537 |
gggatcattcttggacatgatatcacacaatgatcagtcagctgcctcaaaacaccatcggtgcatcatttgagcctcatcccaaattatcaactttgca |
16042636 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16042637 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcatta--ctcaatagggactgtcagcgtcgagtgcacggttcttc |
16042734 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccatgtaat |
299 |
Q |
| |
|
|| |||||||||||||||| ||||||| | ||| || | ||| |||||||||||||| || ||||||||| || ||||||||||||||||| |||| |
|
|
| T |
16042735 |
cacctggtaatagaagagcggctataccgttggatgcagtattcaatacaattaacccattcgatctaacagcagccgacaatgttttccatataat |
16042831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 294
Target Start/End: Complemental strand, 6310701 - 6310410
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
6310701 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgca |
6310602 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
6310601 |
gcatgcatcaggtctgccctaggactatccttttccatcgtaagcgataacgcctcattaatctcaaaagggactgtcggcgtggagtgcgcggttcttc |
6310502 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| || ||||| |||||||||||||| || ||||||||| || |||||||| |||||||| |
|
|
| T |
6310501 |
cacctggtaatagaagagccgctataccgttggatgcagcattcaatacaattaaccccttcgatctaacagcaaccgacaatcttttccat |
6310410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 36207724 - 36208018
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||| | |||||| |||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||||| || |
|
|
| T |
36207724 |
taagggatcattcttggacatggtatcacacattgatcagtcaactgcctcaaaacaccattagtgcatgattggagcctcatcccaaattatcaacgtt |
36207823 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| | ||| |
|
|
| T |
36207824 |
gcagcacgcaccaggtctaccctaggactattcttttccatcgtaagcgatgatgcctcgttaatcttaatagggactgtcggcgtcgagtgcatgattc |
36207923 |
T |
 |
| Q |
201 |
ttcca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
||||| |||||||||||| ||||| ||||||||| | || |||| |||||||||||||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
36207924 |
ttccacctggtaatagaaaagccgttatactgctagatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaatgttttccat |
36208018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 2329678 - 2329969
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||| || ||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||| || |
|
|
| T |
2329678 |
gggatcattcttggacatgatatcacacattgatcggtaaactttctcaaaacaccattggtgcatcattggagactcataaaaaattatcaactttgca |
2329777 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||| |
|
|
| T |
2329778 |
gcacacaccaggtctgccctaggactgtccttttccatagtaagcgatgatgcctccttaatctcaatagggactgccagtttcgagtgtgcggttcttc |
2329877 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| | |||||| ||| | || |||| ||||||||||||||||| ||||||| | || ||||||||||||||| |
|
|
| T |
2329878 |
cacctggtaatagaagagtctctataccgctagatgcaacattcaatacaattaaccctttcgatctaatagcagttgacaatgttttccat |
2329969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 52501089 - 52501305
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| | ||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
52501089 |
gggatcattcttggacatgatatcacgcattgatcggccaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
52501188 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
52501189 |
gcacgcatcaggtcttccctaggactatccttttccatcgtaagcgatgatgcctca-taatcttaatagggactgtcagcgtcgagtgtgcggttcttc |
52501287 |
T |
 |
| Q |
204 |
c-actggtaatagaagag |
220 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
52501288 |
ctcctggtaatagaagag |
52501305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 37389862 - 37389633
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||| | | |||||||||||||| |||| ||||||| ||||||||||||||| || |||||||||| ||||||| |||||||||||||| |
|
|
| T |
37389862 |
taagggatcattcttggccatgatatcacgcaatgattggtcaactgcctcaaaacaccatcattgtatcattggagtctcatcccaaattatcaacttt |
37389763 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||| |
|
|
| T |
37389762 |
gcagcacgcaccaggtctgccctgggactatccttttccattgtaagcgatgacacctcattaatctcaatagggactgtcggcgtggagtgcgcgattc |
37389663 |
T |
 |
| Q |
201 |
ttcca-ctggtaatagaagagccgctatac |
229 |
Q |
| |
|
||||| |||||||||||||||||||||||| |
|
|
| T |
37389662 |
ttccacctggtaatagaagagccgctatac |
37389633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2452827 - 2452690
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
|||||| |||||| | ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
2452827 |
taaggggtcattcttggacatgatatcacacattgatcgatcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaacatt |
2452728 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctg-ccctaggactatcctttt |
137 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2452727 |
acagcacgcaccaggtctgcccctaggactatcctttt |
2452690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 48775045 - 48774920
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||| | || ||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
48775045 |
taagggatcattcttggatatgatatcatgcattgattggtcaactgcttcaaaacaccatcggtgcatcattggagcctcatcacaaattatcaacttt |
48774946 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctagg |
126 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
48774945 |
gaagcacgcaccaggtctgccctagg |
48774920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 48774923 - 48774799
Alignment:
| Q |
171 |
tagggactgtcagcgtcgagtgcgcggttcttccac-tggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatct |
269 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| |||||||||||||| |||||| ||||| || |||| ||||||||||||| || ||||| |
|
|
| T |
48774923 |
tagggactgtttgcgtcgagtgcacggttcttccacctggtaatagaagagttgctatatcgctggatgcaacattcaatacaattaacctcttcgatct |
48774824 |
T |
 |
| Q |
270 |
aacaacacccgacaatgttttccat |
294 |
Q |
| |
|
||||||| | |||||||||||||| |
|
|
| T |
48774823 |
aacaacaactaacaatgttttccat |
48774799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073 (Bit Score: 183; Significance: 5e-99; HSPs: 2)
Name: scaffold0073
Description:
Target: scaffold0073; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 17 - 294
Target Start/End: Original strand, 32457 - 32735
Alignment:
| Q |
17 |
gacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggt |
116 |
Q |
| |
|
|||||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
32457 |
gacatgatatcacgcaatgatcggtcagctgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggt |
32556 |
T |
 |
| Q |
117 |
ctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatag |
215 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||| |||||||||| |
|
|
| T |
32557 |
ctgccctaagactatccttttccattgtaagcgatgatgcctcattaatctcaatagggtctatcagcgtcgagtacacggttcttccacctggtaatag |
32656 |
T |
 |
| Q |
216 |
aagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|||||||| ||||||||||| || ||||| |||||||||||||| || ||||||| | || ||||||||||||||||| |
|
|
| T |
32657 |
aagagccgttatactgctggatgcagcattcaatacaattaaccccttcgatctaatagcagccgacaatgttttccat |
32735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 260 - 554
Alignment:
| Q |
1 |
taagggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaacttt |
100 |
Q |
| |
|
||||||||||||| | ||||||||||||| | ||||| ||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| |
|
|
| T |
260 |
taagggatcattcttgaacatgatatcacgtaatgatcggtcaactacctcaaaacaccattggtgcatcattggagcctcaccccaaattatcaacttt |
359 |
T |
 |
| Q |
101 |
acagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttc |
200 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
360 |
gcagcatgcattaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggactgtcggcgtggagtgtgcggttc |
459 |
T |
 |
| Q |
201 |
ttcca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
||||| |||||||||||||||||| ||||| | | | || |||| |||||||||||||| || |||||||||||| ||||||| |||||||| |
|
|
| T |
460 |
ttccacctggtaatagaagagccgttataccgtttgatgcaacattcaatacaattaaccccttcgatctaacaacagacgacaatattttccat |
554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 28426 - 28139
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
28426 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgca |
28327 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28326 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
28228 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| |||||||||||||| || ||||||||| || |||||||||||||| |
|
|
| T |
28227 |
cttctggtaatagaagagtcattataccgctagatgcagcattcaatacaattaaccccttcgatctaacagcagccgacaatgttttc |
28139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 4 - 286
Target Start/End: Original strand, 42487 - 42770
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
42487 |
gggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaacaccatcagtgcatcattggagcctcatcccaaattatcaactttgca |
42586 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42587 |
gcacgcaccaagtatgccctaagactatccttttccatcttaagcgatgatgcctcattaatctcaatagggactgtcggcgtcgagtgcgcggttcttc |
42686 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatg |
286 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||| || ||||| | |||||||||||| || ||||||||| || ||||||||| |
|
|
| T |
42687 |
cacctggtaatagaagagccgttataccgctggatgcagcattcattacaattaaccccttcgatctaacagcagccgacaatg |
42770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 183323 - 183614
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | || ||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||| ||||||| |||||| || |
|
|
| T |
183323 |
gggatcattcttggatatgatatcatgcattgattggtcaactgcctcaaaacaccatcggtacatcattggagcctaatcccaaattattaactttgca |
183422 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
183423 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactggtagcgtcgagtgcgcggttcttc |
183522 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttccat |
294 |
Q |
| |
|
|| ||||||||||||||| ||||||| ||||| || |||| |||||||||||||| || ||||||||| || | |||||||||||||| |
|
|
| T |
183523 |
cacctggtaatagaagagtcgctatatcgctggatgcaacattcaatacaattaaccccttcgatctaacagcaactaacaatgttttccat |
183614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1139 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold1139
Description:
Target: scaffold1139; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 286
Target Start/End: Original strand, 1529 - 1812
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||| || |
|
|
| T |
1529 |
gggatcattattggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcggtgcatcatttgagcctcaaccaaaattattaactttgca |
1628 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
1629 |
gcacgcaccaggtctgccctaggactatcctttttcattttaagcgatgatgcctcattaatatcaatagggactgttagtgtcgagtgcccggttcttc |
1728 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatg |
286 |
Q |
| |
|
| |||||||||||||||||| ||||| ||||| || ||||| |||||||||| ||| || |||||||||||| ||||||||| |
|
|
| T |
1729 |
gacctggtaatagaagagccgttataccgctggatgtagcattcaatacaattagcccattcgatctaacaacaaccgacaatg |
1812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 291
Target Start/End: Complemental strand, 4967 - 4680
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||| || |
|
|
| T |
4967 |
gggatcattcttggacatgatatcatgcattgatcggtcaactgcctcaaaacaccatcagtgcatcattggatcctcatcccaaattatcaactttgca |
4868 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
4867 |
gcacgcaccaggtctgccctaggactatccttttctatcgtaagcgatgatgcctca-taatctcaatagggactgtcagggtcgagtgtgcggttcttc |
4769 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | |||||| || | || | ||| |||||||||||||| || ||||||||| || |||||||||||||| |
|
|
| T |
4768 |
ctcctggtaatagaagagtcactataccgccagaagaagtattcaatacaattaaccccttcgatctaacagcagccgacaatgttttc |
4680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 13984 - 13699
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
13984 |
gggatcattcttggacatgatatcactcattgatctgtcaactgcctcaaaacaccattagtgcatcattggagcctcatcccaaattatcatctttgca |
13885 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
13884 |
gcacgcaccaggtctgccctaagactatccttttccatcgtaagcaatgatgcctca-taatctcaatagggactgtcagtgtcgagtgtgcgattcttc |
13786 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttt |
289 |
Q |
| |
|
|| ||||||||||||||| | |||||| |||| || |||| |||||||||||||| || |||||||||||| |||||||||||| |
|
|
| T |
13785 |
cacctggtaatagaagagtcactataccactggatgcaacattcaatacaattaaccccttcgatctaacaacagccgacaatgttt |
13699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 291
Target Start/End: Original strand, 19517 - 19804
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
19517 |
gggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatcagtgcatcattggagcctcatcccaaattatcaactttgca |
19616 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
19617 |
gcacgcaccaggtctgacctaagactatccttttccatcgtaagcgatgatgcctca-taatctcaatagggaatgtcaaagtcgagtgtgcggttcttc |
19715 |
T |
 |
| Q |
204 |
c-actggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
| ||||||||||||||| | ||||| ||| | || ||||| | |||||||||||| || |||||||| ||| |||||||||||||| |
|
|
| T |
19716 |
ctcctggtaatagaagagtcattataccgctagatgcagcattcagtacaattaaccccttcgatctaactacagccgacaatgttttc |
19804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 4 - 291
Target Start/End: Original strand, 187066 - 187351
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
187066 |
gggatcattcttggacatgatatcacgcattgatcgttcaactacctcaaaacaccatgagtgcatcattggagcctcatctcaaattatcaactttgca |
187165 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
187166 |
gcacgcaccagg--tgccctaggactatccttttccatcgtaagcgatgatgcgtca-taatctcaatagggactgtcagcgtcgagtgtgcagttcttc |
187262 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
|| ||||||||||||||| | ||||| ||||| || |||| ||||||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
187263 |
cacctggtaatagaagagtcattataccgctggatgcatcattcaatacaattaacctcttcgatctaacaacagccgacaatgttttc |
187351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0550 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0550
Description:
Target: scaffold0550; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 259 - 5
Alignment:
| Q |
20 |
atgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttacagcacgcaccaggtctg |
119 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||||| ||||||||||||||||| | || |||||||||||||| ||||||||||| |||||| |
|
|
| T |
259 |
atgatatcacgcaatgatcggtcagctgcctcaaaacaccattagtgcatcattggagccttaacccaaattatcaactttgcagcacgcacctggtctg |
160 |
T |
 |
| Q |
120 |
ccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttcca-ctggtaatagaag |
218 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
159 |
ccctaagactatccttttccatcgtaagcgatgatgcctcgttaatttcaatagagactgtcagcgtcgagtgcgcggttcttccacctggtaatagaag |
60 |
T |
 |
| Q |
219 |
agccgctatactgctggttgatgcatttaatacaattaacccttttgatctaaca |
273 |
Q |
| |
|
||||||||||| ||||| || |||| |||||||||||||| || ||||||||| |
|
|
| T |
59 |
agccgctataccgctggatgcaacattcaatacaattaaccccttcgatctaaca |
5 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0356 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0356
Description:
Target: scaffold0356; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 17584 - 17382
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||||| || |
|
|
| T |
17584 |
gggatcattcttggacatgatatcacgcattgatcgatcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaactattaactttgca |
17485 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
17484 |
gcacgcaccagttcttccctaggactatccttttccattgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgtgcggttcttc |
17385 |
T |
 |
| Q |
204 |
cac |
206 |
Q |
| |
|
||| |
|
|
| T |
17384 |
cac |
17382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 136; Significance: 6e-71; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 321043 - 320824
Alignment:
| Q |
4 |
gggatcattcctagacatgatatcacgcattgatcagtcaacttcctcaaaacaccatcggtgcatcattggagcctcatccaaaattatcaactttaca |
103 |
Q |
| |
|
|||||||||| | ||||||||||||| |||||||| |||| | |||||||||||||||| || |||||||||||||||||| |||||||||||||| || |
|
|
| T |
321043 |
gggatcattcttggacatgatatcacccattgatcgatcaaatgcctcaaaacaccatcgatgtatcattggagcctcatcccaaattatcaactttgca |
320944 |
T |
 |
| Q |
104 |
gcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttc |
203 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
320943 |
gcacgcaccaggtcttccctaggactatccttttctatcacaagcgatgatgcctcattaatctcaatagggactgtcaacgtcgagtgtggggttcttc |
320844 |
T |
 |
| Q |
204 |
ca-ctggtaatagaagagcc |
222 |
Q |
| |
|
|| ||||||| ||||||||| |
|
|
| T |
320843 |
cacctggtaaaagaagagcc |
320824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 319314 - 319135
Alignment:
| Q |
111 |
ccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctcattaatctcaatagggactgtcagcgtcgagtgcgcggttcttccac-tgg |
209 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||| || |||||||||| ||| |
|
|
| T |
319314 |
ccaggtctgccctaagactatc-ttttccatcgtaagcaatgatgactcat-aatctcaatagggactgtcagcgtcaagtgtgcagttcttccacctgg |
319217 |
T |
 |
| Q |
210 |
taatagaagagccgctatactgctggttgatgcatttaatacaattaacccttttgatctaacaacacccgacaatgttttc |
291 |
Q |
| |
|
||||||||||| | |||||| ||||| || ||||| |||||||||||||| ||||||||||||||| |||| ||||||||| |
|
|
| T |
319216 |
taatagaagagtcactataccgctggatgcagcattcaatacaattaacccctttgatctaacaacagccgaaaatgttttc |
319135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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