View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9286_low_13 (Length: 442)

Name: NF9286_low_13
Description: NF9286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9286_low_13
NF9286_low_13
[»] chr1 (55 HSPs)
chr1 (15-423)||(1378406-1378824)
chr1 (15-158)||(1378834-1378977)
chr1 (20-100)||(46607804-46607884)
chr1 (17-100)||(7197366-7197449)
chr1 (20-107)||(24674380-24674467)
chr1 (20-102)||(4621360-4621442)
chr1 (27-100)||(8077641-8077714)
chr1 (21-102)||(29057461-29057542)
chr1 (20-100)||(34778336-34778416)
chr1 (17-100)||(27454986-27455069)
chr1 (27-100)||(15059532-15059605)
chr1 (20-100)||(7766850-7766930)
chr1 (20-100)||(7946838-7946918)
chr1 (17-96)||(2272342-2272421)
chr1 (20-95)||(46113525-46113600)
chr1 (20-101)||(168194-168275)
chr1 (20-101)||(20487313-20487394)
chr1 (20-100)||(23232388-23232468)
chr1 (20-96)||(24122021-24122097)
chr1 (27-99)||(24216973-24217045)
chr1 (20-100)||(30677170-30677250)
chr1 (49-101)||(47091683-47091735)
chr1 (27-100)||(32729539-32729612)
chr1 (20-100)||(14258550-14258630)
chr1 (40-100)||(18533867-18533927)
chr1 (29-100)||(1138573-1138644)
chr1 (27-86)||(17935777-17935836)
chr1 (17-100)||(23734110-23734193)
chr1 (17-100)||(23741302-23741385)
chr1 (27-97)||(52135127-52135197)
chr1 (27-100)||(18646847-18646920)
chr1 (27-100)||(21726723-21726796)
chr1 (23-96)||(37349521-37349594)
chr1 (27-100)||(40802197-40802270)
chr1 (47-99)||(10059050-10059102)
chr1 (21-100)||(25496612-25496691)
chr1 (20-94)||(32930749-32930823)
chr1 (17-79)||(37351581-37351643)
chr1 (27-84)||(7578419-7578476)
chr1 (20-77)||(33905633-33905690)
chr1 (22-98)||(1818730-1818806)
chr1 (51-98)||(16899507-16899554)
chr1 (42-100)||(6776139-6776196)
chr1 (27-99)||(1486415-1486485)
chr1 (27-96)||(26608180-26608248)
chr1 (25-81)||(8779864-8779920)
chr1 (21-101)||(25237113-25237193)
chr1 (20-100)||(34965323-34965403)
chr1 (20-76)||(45859166-45859222)
chr1 (37-96)||(17447272-17447331)
chr1 (37-99)||(9926288-9926350)
chr1 (20-66)||(36156011-36156057)
chr1 (27-100)||(809216-809289)
chr1 (27-71)||(9500485-9500529)
chr1 (49-97)||(52592557-52592605)
[»] chr3 (60 HSPs)
chr3 (21-100)||(7470339-7470418)
chr3 (17-100)||(7485645-7485728)
chr3 (27-101)||(48977381-48977455)
chr3 (15-100)||(21362937-21363022)
chr3 (20-100)||(34492698-34492778)
chr3 (20-102)||(18177010-18177092)
chr3 (27-101)||(30257617-30257691)
chr3 (15-100)||(40133567-40133652)
chr3 (20-101)||(45529877-45529958)
chr3 (20-100)||(30807276-30807356)
chr3 (20-100)||(35492905-35492985)
chr3 (20-100)||(46576342-46576422)
chr3 (20-96)||(4462631-4462707)
chr3 (20-100)||(8456273-8456353)
chr3 (20-100)||(31537961-31538041)
chr3 (20-100)||(40940819-40940899)
chr3 (21-100)||(15566623-15566701)
chr3 (21-100)||(25289838-25289917)
chr3 (20-99)||(52455772-52455851)
chr3 (20-95)||(52821758-52821833)
chr3 (27-98)||(53424306-53424377)
chr3 (20-102)||(4252519-4252601)
chr3 (20-93)||(26174114-26174187)
chr3 (20-101)||(50582985-50583066)
chr3 (27-95)||(25379760-25379828)
chr3 (20-100)||(29915392-29915472)
chr3 (20-100)||(29964545-29964625)
chr3 (21-100)||(49258386-49258465)
chr3 (27-100)||(32151419-32151491)
chr3 (15-95)||(11390601-11390681)
chr3 (20-100)||(45272539-45272619)
chr3 (20-87)||(26108299-26108366)
chr3 (27-97)||(25344187-25344257)
chr3 (27-101)||(51532782-51532856)
chr3 (27-96)||(6041802-6041871)
chr3 (15-75)||(8958154-8958214)
chr3 (20-100)||(55287797-55287877)
chr3 (37-100)||(9842915-9842978)
chr3 (21-99)||(16140292-16140370)
chr3 (27-101)||(19857046-19857118)
chr3 (27-100)||(25017510-25017582)
chr3 (27-100)||(38732960-38733033)
chr3 (27-80)||(49167070-49167123)
chr3 (27-100)||(55371415-55371488)
chr3 (27-87)||(9853623-9853683)
chr3 (27-82)||(53234040-53234095)
chr3 (27-97)||(50731363-50731433)
chr3 (27-97)||(50781421-50781491)
chr3 (31-96)||(36660768-36660833)
chr3 (20-97)||(53288835-53288912)
chr3 (19-87)||(14343410-14343478)
chr3 (36-96)||(26158816-26158876)
chr3 (27-71)||(39041982-39042026)
chr3 (47-99)||(51390989-51391041)
chr3 (28-95)||(27811999-27812066)
chr3 (27-65)||(1692863-1692901)
chr3 (28-94)||(50195410-50195476)
chr3 (21-77)||(10083943-10083999)
chr3 (21-77)||(10190866-10190922)
chr3 (15-59)||(31766726-31766770)
[»] chr2 (46 HSPs)
chr2 (19-101)||(18976547-18976629)
chr2 (27-100)||(15037953-15038026)
chr2 (20-96)||(4852556-4852632)
chr2 (20-100)||(33827696-33827776)
chr2 (20-102)||(25293158-25293240)
chr2 (27-100)||(44946183-44946256)
chr2 (31-99)||(40997484-40997552)
chr2 (20-96)||(44976277-44976353)
chr2 (20-99)||(8192474-8192553)
chr2 (20-102)||(32845083-32845165)
chr2 (27-100)||(6714411-6714484)
chr2 (31-100)||(11941344-11941413)
chr2 (20-100)||(36390691-36390769)
chr2 (15-100)||(41313986-41314071)
chr2 (15-99)||(14946774-14946858)
chr2 (20-96)||(17324764-17324840)
chr2 (27-98)||(19054021-19054092)
chr2 (15-77)||(5394034-5394096)
chr2 (20-97)||(4567560-4567637)
chr2 (20-100)||(24195998-24196078)
chr2 (20-81)||(10582113-10582174)
chr2 (15-100)||(27269468-27269553)
chr2 (27-84)||(27290598-27290655)
chr2 (27-100)||(30466960-30467033)
chr2 (27-100)||(32526215-32526288)
chr2 (20-95)||(41329842-41329917)
chr2 (28-78)||(44610090-44610140)
chr2 (27-80)||(19849847-19849900)
chr2 (21-77)||(1191530-1191586)
chr2 (24-92)||(4618812-4618880)
chr2 (19-95)||(8258896-8258972)
chr2 (15-66)||(29361582-29361632)
chr2 (21-90)||(19605969-19606038)
chr2 (20-77)||(43374448-43374505)
chr2 (17-100)||(20297557-20297641)
chr2 (20-99)||(3405275-3405354)
chr2 (18-102)||(18708467-18708553)
chr2 (27-82)||(33901514-33901569)
chr2 (27-78)||(34516538-34516589)
chr2 (20-63)||(35171831-35171874)
chr2 (27-77)||(13266507-13266557)
chr2 (27-100)||(28194263-28194337)
chr2 (15-77)||(36242430-36242492)
chr2 (47-96)||(918849-918898)
chr2 (60-97)||(12983963-12984000)
chr2 (20-77)||(45271401-45271458)
[»] chr5 (55 HSPs)
chr5 (17-102)||(23270642-23270727)
chr5 (20-100)||(25586926-25587006)
chr5 (18-100)||(1827651-1827733)
chr5 (27-100)||(31288076-31288149)
chr5 (27-100)||(32059570-32059643)
chr5 (20-100)||(22392695-22392775)
chr5 (15-96)||(15971240-15971321)
chr5 (20-100)||(11465030-11465110)
chr5 (20-100)||(13038577-13038657)
chr5 (20-100)||(13108572-13108652)
chr5 (20-100)||(15641228-15641308)
chr5 (20-100)||(38684202-38684282)
chr5 (20-99)||(36954813-36954892)
chr5 (27-97)||(4603774-4603844)
chr5 (20-97)||(8484784-8484861)
chr5 (36-97)||(25750750-25750811)
chr5 (20-97)||(38631084-38631161)
chr5 (20-100)||(11926625-11926705)
chr5 (20-100)||(33709624-33709703)
chr5 (20-100)||(34310136-34310216)
chr5 (17-88)||(42193491-42193562)
chr5 (20-98)||(19145534-19145612)
chr5 (15-100)||(5067295-5067380)
chr5 (27-92)||(10869695-10869760)
chr5 (27-100)||(34049816-34049889)
chr5 (38-103)||(37397704-37397769)
chr5 (20-100)||(27498854-27498934)
chr5 (20-83)||(37495058-37495121)
chr5 (15-100)||(28614602-28614686)
chr5 (27-100)||(30485822-30485895)
chr5 (21-101)||(7085750-7085830)
chr5 (20-100)||(15931053-15931133)
chr5 (45-104)||(3715057-3715116)
chr5 (21-100)||(25343233-25343312)
chr5 (47-101)||(12317300-12317354)
chr5 (36-97)||(27487694-27487755)
chr5 (31-99)||(40330628-40330696)
chr5 (45-96)||(42006791-42006842)
chr5 (27-97)||(930615-930685)
chr5 (27-77)||(12398578-12398628)
chr5 (27-90)||(6014410-6014473)
chr5 (21-100)||(16616113-16616192)
chr5 (27-97)||(8780475-8780545)
chr5 (27-100)||(15485421-15485495)
chr5 (20-93)||(16074035-16074108)
chr5 (28-77)||(19456340-19456389)
chr5 (47-100)||(33025474-33025527)
chr5 (50-94)||(204177-204221)
chr5 (27-95)||(2499308-2499376)
chr5 (22-66)||(18207235-18207279)
chr5 (42-97)||(10399770-10399825)
chr5 (60-95)||(18243488-18243523)
chr5 (47-97)||(22253295-22253345)
chr5 (27-76)||(14656645-14656694)
chr5 (20-100)||(36895419-36895499)
[»] chr4 (49 HSPs)
chr4 (20-101)||(52983612-52983693)
chr4 (20-100)||(25852208-25852288)
chr4 (24-101)||(46714385-46714462)
chr4 (20-100)||(41621719-41621799)
chr4 (21-100)||(54127466-54127545)
chr4 (27-101)||(34844888-34844962)
chr4 (20-100)||(32986191-32986271)
chr4 (20-96)||(51535611-51535687)
chr4 (20-99)||(13873418-13873497)
chr4 (27-102)||(40058982-40059057)
chr4 (27-100)||(1985830-1985903)
chr4 (20-100)||(22625193-22625273)
chr4 (20-100)||(27528918-27528998)
chr4 (20-100)||(33696402-33696482)
chr4 (20-100)||(35674864-35674944)
chr4 (17-100)||(19660652-19660735)
chr4 (21-96)||(42245744-42245819)
chr4 (15-97)||(13584372-13584454)
chr4 (15-96)||(34835527-34835608)
chr4 (27-90)||(35229172-35229235)
chr4 (36-102)||(13550200-13550266)
chr4 (20-97)||(20566346-20566424)
chr4 (27-100)||(5609332-5609405)
chr4 (27-96)||(43719195-43719264)
chr4 (17-96)||(45787824-45787902)
chr4 (21-99)||(19220528-19220606)
chr4 (17-95)||(32942369-32942447)
chr4 (27-100)||(33992620-33992693)
chr4 (20-100)||(44343507-44343588)
chr4 (19-100)||(54497093-54497174)
chr4 (9-101)||(13771595-13771687)
chr4 (38-94)||(55961883-55961939)
chr4 (20-87)||(2351020-2351087)
chr4 (45-100)||(34722164-34722219)
chr4 (17-96)||(41085024-41085103)
chr4 (27-77)||(7392093-7392143)
chr4 (27-97)||(40252295-40252365)
chr4 (27-100)||(36131640-36131713)
chr4 (27-80)||(49287872-49287925)
chr4 (53-93)||(10125783-10125823)
chr4 (51-90)||(4911926-4911965)
chr4 (10-93)||(43352437-43352520)
chr4 (17-95)||(9646336-9646414)
chr4 (20-66)||(12500181-12500227)
chr4 (50-100)||(13716601-13716651)
chr4 (27-93)||(31334545-31334611)
chr4 (15-100)||(18875634-18875719)
chr4 (27-76)||(20078114-20078163)
chr4 (47-94)||(25969652-25969700)
[»] scaffold0576 (1 HSPs)
scaffold0576 (20-100)||(5205-5285)
[»] chr8 (48 HSPs)
chr8 (20-100)||(3734746-3734826)
chr8 (15-101)||(18532104-18532190)
chr8 (20-100)||(34237778-34237858)
chr8 (21-100)||(42643242-42643321)
chr8 (15-100)||(24018380-24018465)
chr8 (20-100)||(4718643-4718723)
chr8 (20-100)||(28193472-28193552)
chr8 (20-100)||(39349254-39349334)
chr8 (20-99)||(19471608-19471687)
chr8 (20-99)||(19542532-19542611)
chr8 (20-99)||(19590085-19590164)
chr8 (27-97)||(27746465-27746535)
chr8 (20-101)||(2618183-2618264)
chr8 (27-100)||(20305906-20305979)
chr8 (27-100)||(21092539-21092612)
chr8 (20-100)||(32879277-32879357)
chr8 (20-102)||(7558066-7558148)
chr8 (20-97)||(8387567-8387644)
chr8 (27-97)||(34694706-34694776)
chr8 (28-97)||(8042655-8042724)
chr8 (20-97)||(15259529-15259606)
chr8 (27-98)||(28964033-28964104)
chr8 (20-99)||(42328004-42328082)
chr8 (21-95)||(264523-264597)
chr8 (21-95)||(651324-651398)
chr8 (21-95)||(837059-837133)
chr8 (27-101)||(28088283-28088357)
chr8 (22-100)||(2166695-2166775)
chr8 (27-100)||(26168978-26169051)
chr8 (26-95)||(30911386-30911455)
chr8 (27-92)||(41070767-41070832)
chr8 (27-87)||(21603241-21603301)
chr8 (23-97)||(21667551-21667625)
chr8 (27-100)||(3403632-3403705)
chr8 (20-77)||(14632975-14633032)
chr8 (15-90)||(4698841-4698916)
chr8 (27-98)||(15974906-15974976)
chr8 (21-71)||(20469944-20469994)
chr8 (47-97)||(36848899-36848949)
chr8 (20-97)||(3794792-3794869)
chr8 (40-81)||(9047421-9047462)
chr8 (16-89)||(33585746-33585819)
chr8 (36-97)||(34639345-34639406)
chr8 (20-71)||(8765649-8765700)
chr8 (17-88)||(11714939-11715010)
chr8 (15-96)||(5202208-5202289)
chr8 (51-96)||(39317022-39317067)
chr8 (51-95)||(34571597-34571641)
[»] chr7 (63 HSPs)
chr7 (20-100)||(2751269-2751349)
chr7 (17-100)||(21217953-21218036)
chr7 (20-101)||(40543033-40543114)
chr7 (20-100)||(7175985-7176065)
chr7 (20-100)||(7275275-7275355)
chr7 (20-99)||(2103054-2103133)
chr7 (27-100)||(23854394-23854467)
chr7 (15-100)||(40332097-40332182)
chr7 (20-100)||(10091186-10091266)
chr7 (20-96)||(22119890-22119966)
chr7 (20-100)||(22638290-22638370)
chr7 (20-99)||(7799955-7800034)
chr7 (21-100)||(18044105-18044184)
chr7 (27-101)||(2344296-2344370)
chr7 (15-97)||(28089817-28089899)
chr7 (20-100)||(17197073-17197153)
chr7 (37-100)||(32849589-32849652)
chr7 (15-97)||(9718105-9718187)
chr7 (20-102)||(31713018-31713100)
chr7 (23-96)||(1469114-1469187)
chr7 (31-100)||(17212051-17212120)
chr7 (20-100)||(11997847-11997927)
chr7 (20-96)||(13332546-13332622)
chr7 (15-99)||(19421230-19421314)
chr7 (28-100)||(25333417-25333489)
chr7 (28-100)||(27009357-27009429)
chr7 (21-100)||(27312150-27312229)
chr7 (25-100)||(42913641-42913716)
chr7 (36-102)||(9683822-9683888)
chr7 (20-97)||(8435818-8435895)
chr7 (20-97)||(21835152-21835229)
chr7 (27-100)||(43785429-43785502)
chr7 (20-84)||(22299863-22299927)
chr7 (20-100)||(28646967-28647047)
chr7 (21-100)||(21370595-21370674)
chr7 (45-100)||(39145800-39145855)
chr7 (15-81)||(22703503-22703569)
chr7 (27-101)||(31197588-31197662)
chr7 (20-97)||(12211658-12211735)
chr7 (23-96)||(27704004-27704077)
chr7 (20-96)||(22696322-22696398)
chr7 (15-95)||(42814867-42814947)
chr7 (17-102)||(5844569-5844654)
chr7 (27-99)||(21574233-21574305)
chr7 (20-76)||(31273936-31273992)
chr7 (21-96)||(23012632-23012707)
chr7 (45-96)||(28003838-28003889)
chr7 (53-96)||(38864602-38864645)
chr7 (27-96)||(3950918-3950988)
chr7 (29-99)||(23330871-23330941)
chr7 (15-100)||(22264620-22264705)
chr7 (15-55)||(35173150-35173190)
chr7 (50-105)||(577672-577727)
chr7 (48-83)||(24686132-24686167)
chr7 (50-93)||(47380903-47380946)
chr7 (25-75)||(674555-674605)
chr7 (21-79)||(14199790-14199848)
chr7 (21-82)||(31481063-31481124)
chr7 (20-56)||(654827-654863)
chr7 (17-96)||(3951110-3951190)
chr7 (47-99)||(9769585-9769637)
chr7 (21-97)||(36173036-36173112)
chr7 (64-100)||(43617438-43617474)
[»] chr6 (28 HSPs)
chr6 (20-100)||(15360221-15360301)
chr6 (21-100)||(12591631-12591710)
chr6 (20-101)||(9238968-9239049)
chr6 (15-100)||(28672061-28672146)
chr6 (20-100)||(654269-654349)
chr6 (20-100)||(22576061-22576141)
chr6 (27-100)||(11007159-11007232)
chr6 (20-100)||(34147340-34147420)
chr6 (20-100)||(34159956-34160036)
chr6 (15-98)||(8479308-8479391)
chr6 (27-94)||(11448871-11448938)
chr6 (15-97)||(9843935-9844017)
chr6 (31-101)||(13753233-13753303)
chr6 (20-100)||(3222758-3222837)
chr6 (27-98)||(21982450-21982521)
chr6 (15-100)||(33499468-33499554)
chr6 (21-100)||(5360195-5360274)
chr6 (21-100)||(21148634-21148713)
chr6 (27-100)||(9208246-9208319)
chr6 (20-96)||(14212890-14212966)
chr6 (20-97)||(1344934-1345009)
chr6 (15-101)||(17081172-17081258)
chr6 (25-105)||(9690766-9690846)
chr6 (27-79)||(17706437-17706489)
chr6 (26-75)||(3433602-3433651)
chr6 (27-100)||(33718588-33718661)
chr6 (21-100)||(31039014-31039093)
chr6 (50-95)||(10377714-10377759)
[»] scaffold0068 (1 HSPs)
scaffold0068 (21-100)||(41768-41847)
[»] scaffold0459 (1 HSPs)
scaffold0459 (20-96)||(10816-10892)
[»] scaffold0366 (2 HSPs)
scaffold0366 (20-96)||(12123-12199)
scaffold0366 (20-96)||(9422-9498)
[»] scaffold0026 (1 HSPs)
scaffold0026 (20-100)||(97489-97569)
[»] scaffold0199 (1 HSPs)
scaffold0199 (27-100)||(8537-8610)
[»] scaffold0623 (1 HSPs)
scaffold0623 (20-96)||(1179-1255)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-100)||(66756-66829)
[»] scaffold0328 (1 HSPs)
scaffold0328 (20-100)||(14985-15065)
[»] scaffold0070 (1 HSPs)
scaffold0070 (20-100)||(40319-40399)
[»] scaffold0460 (1 HSPs)
scaffold0460 (20-101)||(8302-8383)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-99)||(52994-53073)
[»] scaffold0717 (1 HSPs)
scaffold0717 (15-89)||(76-150)
[»] scaffold0217 (1 HSPs)
scaffold0217 (22-100)||(7434-7512)
[»] scaffold0240 (1 HSPs)
scaffold0240 (27-100)||(12884-12957)
[»] scaffold0028 (1 HSPs)
scaffold0028 (27-102)||(27768-27843)
[»] scaffold0200 (1 HSPs)
scaffold0200 (27-100)||(26673-26746)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-71)||(161832-161883)
[»] scaffold0157 (1 HSPs)
scaffold0157 (20-66)||(20250-20296)


Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 15 - 423
Target Start/End: Complemental strand, 1378824 - 1378406
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgacttgttgttagt 114  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  1378824 gacaccagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaatgagtttacttgttgttagt 1378725  T
Q  115 tattttattatttggaatacatttgatcctatattcattgtgaagtctttgctaacccatcattgagtcactataatcgtcataaatcgctttgtggctt 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | | |||||||||||||||||||||||||||||||||||||    
T  1378724 tattttattatttggaatacatttgatcctatattcattgtgaagtctttgccaaaccgtgactgagtcactataatcgtcataaatcgctttgtggctt 1378625  T
Q  215 gattagtttggttagccaatatttttcttt--nnnnnnnnnnntctaaattctcttacttg--------aatcactaaatatggtcgcatagagatttca 304  Q
    ||||||||||||||||||||||||||||||             ||||| ||||||||||||        |||||||||||||||||||||||||||||||    
T  1378624 gattagtttggttagccaatatttttctttaaaaaaaaaataatctaacttctcttacttgaatcactaaatcactaaatatggtcgcatagagatttca 1378525  T
Q  305 ctcctatgtttttcatcaaaacttgtgactttgcgcgccaatctatttaaaaaatttaccatatacctcaacaatgtcccctacccttttaaccnnnnnn 404  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||          
T  1378524 ctcctatgtttttcatcaaaacttgtgactttgctcgccaatccatttaaaaaatttaccatatacctcaacaatgtcccctacccttttaaccaaaaaa 1378425  T
Q  405 ntatcaattttacccacct 423  Q
     ||||||||||||||||||    
T  1378424 atatcaattttacccacct 1378406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 1378977 - 1378834
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgacttgttgttagt 114  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||||||| |    
T  1378977 gacaccagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatgggttgacttgttgttaat 1378878  T
Q  115 tattttattatttggaatacatttgatcctatattcattgtgaa 158  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  1378877 tattttattatttggaatagatttgatcttatattcattgtgaa 1378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 46607884 - 46607804
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46607884 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 7197366 - 7197449
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  7197366 catcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24674467 - 24674380
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgacttgt 107  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  24674467 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttaacttgt 24674380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 4621360 - 4621442
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  4621360 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 4621442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 8077714 - 8077641
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  8077714 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8077641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 29057461 - 29057542
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  29057461 agagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttga 29057542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 34778416 - 34778336
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34778416 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 27454986 - 27455069
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||  |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  27454986 catcagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 27455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 15059532 - 15059605
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  15059532 aatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 7766850 - 7766930
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||    
T  7766850 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgggtt 7766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 7946918 - 7946838
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||    
T  7946918 cagagggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtt 7946838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 2272421 - 2272342
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||| |||| ||| |||||||| || |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2272421 catcagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 46113525 - 46113600
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  46113525 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 168275 - 168194
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| ||||||||||| | |||||||||| |||||| |||| |||||||||||||||| ||||||||||||    
T  168275 cagagggaatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaactccaaatgggttg 168194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 20487313 - 20487394
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| | || |||||||||  ||||||||||||||||||    
T  20487313 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggttg 20487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 23232388 - 23232468
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||| |||| |||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  23232388 cagagggaatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgggtt 23232468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 24122097 - 24122021
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||| |||| ||||||||| ||||||||||||||    
T  24122097 cagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatg 24122021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 24217045 - 24216973
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||| |||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  24217045 aatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 30677250 - 30677170
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||||| |||  ||||||||||| ||||||||||||||||    
T  30677250 cagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgggtt 30677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 47091735 - 47091683
Alignment:
Q  49 ggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggttg 47091683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 32729612 - 32729539
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||| ||  ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  32729612 aatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 14258550 - 14258630
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| ||||||||  ||||| | ||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  14258550 cagagggaatcgaaccagagacatctggaggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgggtt 14258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 18533867 - 18533927
Alignment:
Q  40 acctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  18533867 acctctggaggagcaaactctaagatctcaagtcaaccactatgtcaaccccaaatgggtt 18533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 1138644 - 1138573
Alignment:
Q  29 tcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| | |||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  1138644 tcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1138573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 17935836 - 17935777
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcca 86  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  17935836 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactatgcca 17935777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 23734193 - 23734110
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||| |||||||| |||||||| |||||||||||| || |||||| |||| |||| ||||  |||||||||||||||||    
T  23734193 catcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggtt 23734110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 23741385 - 23741302
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||| |||||||| |||||||| |||||||||||| || |||||| |||| |||| ||||  |||||||||||||||||    
T  23741385 catcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgggtt 23741302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 52135197 - 52135127
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||||| ||  || ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  52135197 aatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaatgg 52135127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 18646920 - 18646847
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| ||||| ||||||||| |||||| |||| ||||||||||| ||||||||||| ||||    
T  18646920 aatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaataggtt 18646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 21726796 - 21726723
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||| ||||| | ||| |||||||||||| ||||| ||||||||||    
T  21726796 aatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatgggtt 21726723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 37349594 - 37349521
Alignment:
Q  23 aggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||| ||||| | |  ||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  37349594 aggaaatcgaacctgagatcatgagaggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaatg 37349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 40802197 - 40802270
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||||||||  || ||||||||||||| |||||||| ||||||| | ||||||||||||||||||    
T  40802197 aatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaaccacaaagccaaccccaaatgggtt 40802270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 10059102 - 10059050
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  10059102 gaggagcaaactccaagatctcaagtcaaccactaggctaatcccaaaagggt 10059050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 25496612 - 25496691
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||||  ||||||||| |||||||||| |||| ||| |||||||||||| |||||| ||||    
T  25496612 agagggaatcgaacttgagaccttaagaggagcaatctccaagatcccaagccaatcactaggccaacgccaaataggtt 25496691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 32930823 - 32930749
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaa 94  Q
    ||||||||||||||| |||||||| || ||||| ||||||||||||  |||  ||||||||||| ||||||||||    
T  32930823 cagaggaaatcgaacttgagacctctgaaggagtaaactccaagattccaaaccaaccactaggtcaaccccaaa 32930749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 37351581 - 37351643
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccac 79  Q
    ||||||| | |||||||| |||||| |||||||||||||||||||||||| |||| |||||||    
T  37351581 catcagaaggaatcgaacctgagacatttggaggagcaaactccaagatcccaagccaaccac 37351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 7578476 - 7578419
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggc 84  Q
    |||||||| |||||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  7578476 aatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactaggc 7578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 33905633 - 33905690
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||    
T  33905633 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 1818806 - 1818730
Alignment:
Q  22 gaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||| |||||||| ||| |||| |||| |||||||||||||||||  ||| |||| || ||||||||||||||||||    
T  1818806 gagggaatcgaacctgaaacctctggaagagcaaactccaagatcctaagccaactaccaggccaaccccaaatggg 1818730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 16899554 - 16899507
Alignment:
Q  51 agcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  16899554 agcacactccaagattacaagtcaaccactaggccaaccccaaatggg 16899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 6776196 - 6776139
Alignment:
Q  42 ctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  6776196 ctttgaaggagcaaactccaagatcccaaaccaaccactaggccaa-cccaaatgggtt 6776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 1486485 - 1486415
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||| |||||||||  ||| ||||  |||||||||| |||| ||||||||||| |||||||||||||||    
T  1486485 aatcgaacctgagaccttgagagtagca--ctccaagatcccaagccaaccactaggtcaaccccaaatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 26608248 - 26608180
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||| |||||||||||||  |||||||| | | ||||||| ||| |||||||||||||||||||||||||    
T  26608248 aatcaaacatgagaccttgagaggagcacaattcaagatc-caattcaaccactaggccaaccccaaatg 26608180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 8779864 - 8779920
Alignment:
Q  25 gaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccacta 81  Q
    |||||||||  |||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  8779864 gaaatcgaagctgagacctctggagaagcaaactccaagatcccaaatcaaccacta 8779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 25237113 - 25237193
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||| |||||||| |||||||||  ||| |||||||||||||||| |||   ||||| ||||||||| | ||||||||||    
T  25237113 agagggaatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaaccattaggccaactctaaatgggttg 25237193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 34965403 - 34965323
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||||||||||| |||||  |||||  | ||| |||||| |||||||||||| ||||| |||| ||||| ||||    
T  34965403 cagaggaaatcgaacatgaaaccttaagaggaatacacttcaagatttcaagtcaaccattaggcaaaccgcaaataggtt 34965323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 45859166 - 45859222
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaac 76  Q
    |||||| |||||||| |||||||| | |||||||||||||||||||| |||| ||||    
T  45859166 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 17447331 - 17447272
Alignment:
Q  37 gagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||  ||| |||| ||||||||||||||| ||||||| | |||||||||||||||    
T  17447331 gagaccttcagagaagcacactccaagatctcaaatcaaccattgggccaaccccaaatg 17447272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 9926288 - 9926350
Alignment:
Q  37 gagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    ||||||||  |||||||| ||||||||||| ||||||||| ||||| ||| | ||||||||||    
T  9926288 gagaccttgagaggagcacactccaagatcccaagtcaactactagaccagctccaaatgggt 9926350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 36156011 - 36156057
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatc 66  Q
    |||||| |||||||| ||| |||| ||||||||||||||||||||||    
T  36156011 cagagggaatcgaacctgacacctctggaggagcaaactccaagatc 36156057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 809289 - 809216
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||| |||||||||  |||||| ||||||||||||| |||  ||||||| |||||||||| | |||||||    
T  809289 aatcaaacctgagaccttaagaggagtaaactccaagatcccaaaccaaccacgaggccaaccctagatgggtt 809216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 9500485 - 9500529
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaag 71  Q
    |||||||| |||||||| || ||||||||||||||||||| ||||    
T  9500485 aatcgaacctgagacctctgaaggagcaaactccaagatcccaag 9500529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 52592605 - 52592557
Alignment:
Q  49 ggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||| ||||||||||| |||||||||| ||||| | ||||||    
T  52592605 ggagcaaactctaagatctcaagccaaccactagaccaactctaaatgg 52592557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 7470339 - 7470418
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7470339 agagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatgggtt 7470418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 7485645 - 7485728
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  7485645 catcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggtt 7485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 48977455 - 48977381
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggttg 48977381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 21363022 - 21362937
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21363022 gacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 21362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 34492698 - 34492778
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34492698 cagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 18177010 - 18177092
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| |||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18177010 cagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 18177092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 30257691 - 30257617
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  30257691 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 30257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 40133567 - 40133652
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  40133567 gacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggtt 40133652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 45529877 - 45529958
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  45529877 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 45529958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 30807276 - 30807356
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  30807276 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30807356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 35492985 - 35492905
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  35492985 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 35492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 46576422 - 46576342
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  46576422 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 4462707 - 4462631
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| ||||||||||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4462707 cagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 4462631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 8456273 - 8456353
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  8456273 cagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 31537961 - 31538041
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  31537961 cagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 40940899 - 40940819
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  40940899 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 40940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 15566623 - 15566701
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15566623 agagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaa-cccaaatgggtt 15566701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 25289838 - 25289917
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  25289838 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 52455772 - 52455851
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||    
T  52455772 cagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 52821758 - 52821833
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  52821758 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacaccaaat 52821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 53424306 - 53424377
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  53424306 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 4252519 - 4252601
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| |||| ||| |||||||||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  4252519 cagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgggttga 4252601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 26174187 - 26174114
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  26174187 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 50583066 - 50582985
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||||||||||||| ||| |||||  |||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  50583066 cagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttg 50582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 25379828 - 25379760
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  25379828 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 29915392 - 29915472
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||    
T  29915392 cagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 29964545 - 29964625
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||    
T  29964545 cagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29964625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 49258386 - 49258465
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| |||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  49258386 agagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgggtt 49258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 32151491 - 32151419
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  32151491 aatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaa-cccaaatgggtt 32151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11390681 - 11390601
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||| ||||||||||| ||| ||| | ||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  11390681 gacaccagaggaaatcaaacctgaaatctttggaggagaaaactccaagatctcaaaccaaccactaggccaaccccaaat 11390601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 45272539 - 45272619
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||  |||||| | |||||||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  45272539 cagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtt 45272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 26108366 - 26108299
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaa 87  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  26108366 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 25344187 - 25344257
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| ||| ||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  25344187 aatcaaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaatgg 25344257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 51532856 - 51532782
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  |||| | |||| |||||||||||||||||    
T  51532856 aatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaatgggttg 51532782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 6041802 - 6041871
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||||||  ||||  ||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  6041802 aatcgaacatgactccttgagaggagcaaactccaagatttcaagtcaaccattagggcaaccccaaatg 6041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 8958154 - 8958214
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaa 75  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  8958154 gacaccagaggaaatcgaacataagacctttgaaggagcagactccaagatcccaagtcaa 8958214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 55287877 - 55287797
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||| |||| || |||||||||||| |||||  |||| ||||||||| ||||||||||||||||||    
T  55287877 cagagggaatcgaacctgaaacctctgaaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgggtt 55287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 9842978 - 9842915
Alignment:
Q  37 gagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||| |||||||| ||||||||||||| |||  |||||||||| |||||||||||||||||    
T  9842978 gagacctctggaggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatgggtt 9842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 16140370 - 16140292
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||| |||||||||||||||| ||  ||||||||| |||||||||| |||   || |||||||||||||||||||||||    
T  16140370 agagaaaatcgaacatgagactttgagaggagcaagctccaagatcccaaactaatcactaggccaaccccaaatgggt 16140292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 19857118 - 19857046
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||    
T  19857118 aatcgaacctgagacatctggaggagcaaactccaagatc-caagccaaccaccaggccaa-cccaaatgggttg 19857046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 25017582 - 25017510
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| | ||| ||||||||||||||||||||||||| |||| ||||  || |||||||||||||||||||    
T  25017582 aatcgaacctaagatctttggaggagcaaactccaagatc-caagccaacatctgggccaaccccaaatgggtt 25017510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 38733033 - 38732960
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| || |||||||| ||||||| |||||||||||||  ||||||||||| ||| |||||| ||||||||||    
T  38733033 aatcggacctgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatgggtt 38732960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 49167123 - 49167070
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccact 80  Q
    |||||||| ||| | |||||||||||||||||||||||||||||| ||||||||    
T  49167123 aatcgaacctgatatctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 55371415 - 55371488
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||||||||||  ||| |||| ||||||| ||| |||| ||||||||||||||||| ||||| ||||    
T  55371415 aatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctcaaataggtt 55371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 9853683 - 9853623
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaa 87  Q
    |||||||| ||||||||||||||||||||||||||||||| |||   ||||||||| ||||    
T  9853683 aatcgaacctgagacctttggaggagcaaactccaagatcccaaactaaccactagaccaa 9853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 53234040 - 53234095
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactag 82  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| ||||||||||    
T  53234040 aatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 50731363 - 50731433
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| ||| |||||||||  |||||||| ||| |||||||||||||||||||||||| | || ||||||||    
T  50731363 aatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatgg 50731433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 50781491 - 50781421
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| ||| |||||||||  |||||||| ||| |||||||||||||||||||||||| | || ||||||||    
T  50781491 aatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatgg 50781421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 36660833 - 36660768
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||| |||||||||  ||||||||||||||||||||  ||  ||||||||||| ||||||||||||    
T  36660833 gaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatg 36660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 53288835 - 53288912
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||| | |||||||||||||||||||||||| || ||| |||  |||||||| ||||||| | ||||||    
T  53288835 cagagggaatcgagcctgagacctttggaggagcaaactctaatatcccaaaccaaccacttggccaacgcaaaatgg 53288912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 14343410 - 14343478
Alignment:
Q  19 tcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaa 87  Q
    ||||| |||||||||  |||||| | ||||||||||||||||||||||||||  |||||| ||| ||||    
T  14343410 tcagatgaaatcgaatctgagacatctggaggagcaaactccaagatctcaaaccaaccaatagaccaa 14343478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 26158876 - 26158816
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||  |||||||| |||||||||||||||| ||||   |||||||||||||||||    
T  26158876 tgagaccttgagaggagcacactccaagatctcaagccaacacataggccaaccccaaatg 26158816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 39041982 - 39042026
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaag 71  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||    
T  39041982 aatcgaacttgagacctctggaggagcaaactccaagatcccaag 39042026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 51390989 - 51391041
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    ||||||||||||| ||||||||||| ||||||||||| || || |||||||||    
T  51390989 gaggagcaaactctaagatctcaagccaaccactaggacagcctcaaatgggt 51391041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 27811999 - 27812066
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||||||||||||||  ||| |||| | ||||| ||||||| |||||||||||| ||| |||||||    
T  27811999 atcgaacatgagaccttgagagaagcacattccaaaatctcaaatcaaccactaggtcaatcccaaat 27812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 1692901 - 1692863
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagat 65  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  1692901 aatcgaacctgagacctctggaggagcaaactccaagat 1692863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 50195410 - 50195476
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaa 94  Q
    ||||||| ||||| |||  ||| |||||||||||||||| |||| ||||||||| || |||||||||    
T  50195410 atcgaacttgagatcttgagagaagcaaactccaagatcccaagacaaccactatgctaaccccaaa 50195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 10083943 - 10083999
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    ||||| |||| ||| |||| ||| |||||||||||||||||||||| |||| |||||    
T  10083943 agagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 10190866 - 10190922
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    ||||| |||| ||| |||| ||| |||||||||||||||||||||| |||| |||||    
T  10190866 agagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 31766770 - 31766726
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactc 59  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||    
T  31766770 gacatcagaggaaatcgaacctgagaccttaagaggagcacactc 31766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 18976547 - 18976629
Alignment:
Q  19 tcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  18976547 tcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 18976629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 15038026 - 15037953
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  15038026 aatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 4852632 - 4852556
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  4852632 cagagggaatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccccaaatg 4852556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 33827696 - 33827776
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  33827696 cagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 25293240 - 25293158
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| |||||||| |||||||| | |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  25293240 cagagggaatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggttga 25293158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 44946183 - 44946256
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  44946183 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 40997484 - 40997552
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| |||||||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaatgggt 40997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 44976277 - 44976353
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  44976277 cagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 8192474 - 8192553
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||||||||  |||||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  8192474 cagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgggt 8192553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 32845165 - 32845083
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| |||||||| ||| || |||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||    
T  32845165 cagagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttga 32845083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 6714411 - 6714484
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtt 6714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 11941344 - 11941413
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  11941344 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 11941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 36390691 - 36390769
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  36390691 cagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaatgggtt 36390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 41314071 - 41313986
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||||||| |||||||| |||||||||||||||||||||| |||  ||||||||| | ||||||||||||||||    
T  41314071 gacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggtt 41313986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 14946858 - 14946774
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||| ||||| ||||||||| | | |||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14946858 gacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaactccaaatgggt 14946774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 17324840 - 17324764
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||  |||  ||||||||||||||||||||||||    
T  17324840 cagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 19054092 - 19054021
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||    
T  19054092 aatcaaacctgagacctttggaggagcagactccaagatctcaagccaatcactaggcccaccccaaatggg 19054021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5394096 - 5394034
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  5394096 gacaccagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 4567560 - 4567637
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||||||| |||||| | || ||||||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  4567560 cagaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaaccccaaatgg 4567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 24196078 - 24195998
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||| |||| ||||||||| ||| |||| ||| |||| ||||||||||||||||||||||||||||    
T  24196078 cagagggaatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgggtt 24195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 10582113 - 10582174
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccacta 81  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||    
T  10582113 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 27269468 - 27269553
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||| ||| | | |||||| ||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  27269468 gacaccagagggaatcaaacctaaaacctttagaggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgggtt 27269553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 27290655 - 27290598
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggc 84  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  27290655 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 27290598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 30466960 - 30467033
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| | ||||| |||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  30466960 aatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtt 30467033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 32526215 - 32526288
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||||  |||||||||||| ||||||| ||| |||||||||| |||||| |||||||||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgggtt 32526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 41329917 - 41329842
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||| |||||||  ||| |||||||||||||||||||| |||||| |||   ||||||||||||||||||||||    
T  41329917 cagagggaatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 44610140 - 44610090
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacca 78  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  44610140 atcgaacctgagacctttggaagagcaaactccaagatctcaagccaacca 44610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 19849900 - 19849847
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccact 80  Q
    |||||||| | |||||||||||||||||||||||||||||||||  ||||||||    
T  19849900 aatcgaacttaagacctttggaggagcaaactccaagatctcaaaccaaccact 19849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 1191586 - 1191530
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    ||||| || ||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  1191586 agagggaaacgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 1191530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 4618812 - 4618880
Alignment:
Q  24 ggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaacccca 92  Q
    ||||||||||| ||| |||||  |||||||| ||||||||||  |||| ||||||||||||||||||||    
T  4618812 ggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8258972 - 8258896
Alignment:
Q  19 tcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||||||||||   ||||| || | |||||||||||    
T  8258972 tcagagggaatcgaacctgagacatctggaggagcaaactccaagatctcaaactaaccattatgtcaaccccaaat 8258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 29361632 - 29361582
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatc 66  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||||    
T  29361632 gacatcagaggaaatcgacc-tgagatctttggaggagcaaactccaagatc 29361582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 19605969 - 19606038
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccc 90  Q
    ||||| |||||||| |||||||||  |||||||  ||||||||||| |||| ||||||||||| ||||||    
T  19605969 agagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactagggcaaccc 19606038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 43374448 - 43374505
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||| |||||||| |||||||| || ||||||||||||||||||| |||| |||||    
T  43374448 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 20297641 - 20297557
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaa-gatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||  ||||||||  |||||||||  |||||||| | ||||| |||| |||| |||||||| |||||||||||||||||||    
T  20297641 catcagaaaaaatcgaatctgagaccttgagaggagcacattccaaagatcccaagccaaccactgggccaaccccaaatgggtt 20297557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3405275 - 3405354
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| || ||||||  || ||||| | ||||||||| |||||||||||||||| |||| | ||||||||    
T  3405275 cagagggaatcgaacctgtgaccttgagatgagcacattccaagatcccaagtcaaccactaggtcaactcaaaatgggt 3405354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 18708553 - 18708467
Alignment:
Q  18 atcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccacta--ggccaaccccaaatgggttga 102  Q
    |||||||| | |||||| |||||||||  ||||| || ||||||||||| ||| ||||||||||  || ||||||||||||| ||||    
T  18708553 atcagagggagtcgaacctgagaccttgagaggaacacactccaagatcccaattcaaccactactgggcaaccccaaatggattga 18708467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 33901569 - 33901514
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactag 82  Q
    |||| ||||||||| |||  |||||| |||||| ||||||||||||||||||||||    
T  33901569 aatcaaacatgagatcttaagaggagtaaactctaagatctcaagtcaaccactag 33901514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 34516538 - 34516589
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacca 78  Q
    |||||||| ||| |||| |||||||||||||||||||||| |||| ||||||    
T  34516538 aatcgaacctgaaacctctggaggagcaaactccaagatcccaagccaacca 34516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 35171874 - 35171831
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaag 63  Q
    |||||| |||||||| |||||||| |||||||||||||||||||    
T  35171874 cagagggaatcgaacctgagacctctggaggagcaaactccaag 35171831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 13266557 - 13266507
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||| |||||    
T  13266557 aatcgaacatgagacctctaaaggagcaaattccaagatctcaagccaacc 13266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 28194263 - 28194337
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtc-aaccactaggccaaccccaaatgggtt 100  Q
    |||||||| | |||||||  |||||||| ||||||||||| |||| | || ||||| ||||||||||||||||||    
T  28194263 aatcgaacctaagaccttaagaggagcacactccaagatcccaagccaaatcactacgccaaccccaaatgggtt 28194337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 36242430 - 36242492
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||| |||||| |||||||| |||||||| |||||||||||| | ||||||| |||| |||||    
T  36242430 gacaccagagggaatcgaacctgagacctctggaggagcaaatttcaagatcccaagccaacc 36242492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 918849 - 918898
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||| ||| ||| |||| ||||||||||| ||||||||||||    
T  918849 gaggagcaaacttcaaaatcccaagccaaccactaggtcaaccccaaatg 918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 12983963 - 12984000
Alignment:
Q  60 caagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  12983963 caagatctcaagtcaaccactagaccaacctcaaatgg 12984000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 45271458 - 45271401
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||| |||||||||||| |||| ||||| ||||||||| |||||| |||| |||||    
T  45271458 cagagggaatcgaacatgaaacctctggagaagcaaactctaagatcccaagccaacc 45271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 23270642 - 23270727
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  23270642 catcggaggaaatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 23270727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 25587006 - 25586926
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  25587006 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25586926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 1827651 - 1827733
Alignment:
Q  18 atcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  1827651 atcagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 31288076 - 31288149
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  31288076 aatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgggtt 31288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 32059570 - 32059643
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32059643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 22392775 - 22392695
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  22392775 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 15971240 - 15971321
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  15971240 gacatcagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccctaaatg 15971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 11465030 - 11465110
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||    
T  11465030 cagaggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgggtt 11465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 13038577 - 13038657
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  13038577 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 13038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 13108572 - 13108652
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  13108572 cagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 13108652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 15641228 - 15641308
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||    
T  15641228 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggtt 15641308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 38684282 - 38684202
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  38684282 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaagtgggtt 38684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 36954892 - 36954813
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  36954892 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 4603844 - 4603774
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4603844 aatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 8484784 - 8484861
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  8484784 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 25750750 - 25750811
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 25750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 38631084 - 38631161
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||||  |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  38631084 cagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 38631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 11926625 - 11926705
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  11926625 cagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 11926705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 33709624 - 33709703
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  33709624 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa-cccaaatgggtt 33709703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 34310216 - 34310136
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  34310216 cagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 42193562 - 42193491
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaac 88  Q
    |||||||||||||||||| |||||||| ||| | |||||||||||||||| |||||||||||||||||||||    
T  42193562 catcagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 19145534 - 19145612
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||||| ||||||||  ||||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  19145534 cagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaaccccaaatggg 19145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5067380 - 5067295
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||||| ||||||||| ||||| || ||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||    
T  5067380 gacaccagagaaaatcgaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaactccaaatgggtt 5067295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 10869695 - 10869760
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaacccca 92  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccaccatgccaacccca 10869760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 34049889 - 34049816
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||    
T  34049889 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaactactagcccaaccccaaatgggtt 34049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 37397769 - 37397704
Alignment:
Q  38 agacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgac 103  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||    
T  37397769 agacctttggaggagcaaactccaagatcacaagccaaccactagaccaaccccaaataggttgac 37397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 27498854 - 27498934
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| | |||||||||||||||||||  |||| ||||||||||| ||||||||||||||||    
T  27498854 cagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggtt 27498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 37495121 - 37495058
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactagg 83  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  37495121 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactagg 37495058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 28614602 - 28614686
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||| |||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||||   |||||||||||||||||    
T  28614602 gacatcagaggtaatcgaacctgagatctttggaggaacaaactctaagatctcaagccaaccact-caccaaccccaaatgggtt 28614686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 30485895 - 30485822
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| || ||||||||||||||||||| |||| ||||| || |||||||||||||||||||    
T  30485895 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 7085750 - 7085830
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||| ||||||||  ||||||| |||||||| ||||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  7085750 agagggaatcgaaccggagacctctggaggagaaaactccaagatcccaagccaaccactaagccagccccaaatgggttg 7085830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 15931133 - 15931053
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||| | || || |||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  15931133 cagagggaatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaaccactaggccaaccccaaatgggtt 15931053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 3715057 - 3715116
Alignment:
Q  45 tggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgact 104  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||    
T  3715057 tggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaattggttgact 3715116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 25343312 - 25343233
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||| ||| |||||||||   | ||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  25343312 agaggaaatcaaacttgagaccttgaaaagagcacaatccaagatttcaagtcaaccactaggccaaccccaaatgggtt 25343233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 12317300 - 12317354
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  12317300 gaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggttg 12317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 27487694 - 27487755
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  27487694 tgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaaccccaaatgg 27487755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 40330696 - 40330628
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||| |||||||||  |||||||||||||||||||||||||  |||||||| ||||||| |||||||||    
T  40330696 gaacttgagaccttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatgggt 40330628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 42006842 - 42006791
Alignment:
Q  45 tggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  42006842 tggatgagcaaactccaagatctcaagccaaccactagcccaaccccaaatg 42006791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 930615 - 930685
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||||| ||  ||||||||||||| || |||||||| |||||||| ||||||||||||||||    
T  930615 aatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaaccactgggccaaccccaaatgg 930685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 12398578 - 12398628
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  12398578 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 6014410 - 6014473
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccc 90  Q
    |||||||| ||||| || ||||| |||||||||||||||| |||| ||| ||||||||||||||    
T  6014410 aatcgaacctgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaaccc 6014473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 16616192 - 16616113
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||||||||  ||||| |||| |||||||||||||||||||| |||| |||| |||| ||||| | ||||||||||    
T  16616192 agagtaaatcgaatctgagatctttagaggagcaaactccaagatcccaagccaactactaagccaatctcaaatgggtt 16616113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 8780545 - 8780475
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||||||||  |||||||| |||||||||||  | ||||||||||||| ||||| |||||||    
T  8780545 aatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaatgg 8780475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 15485421 - 15485495
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacca-ctaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||||  |||||||| |||||||| || |||| |||||  ||||||||||||||||||||||    
T  15485421 aatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacccgctaggccaaccccaaatgggtt 15485495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 16074035 - 16074108
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    ||||| ||||||||| |||||||||  ||| |||| |||| ||||||||||  |||||| ||||||||||||||    
T  16074035 cagagaaaatcgaacttgagaccttgagagtagcatactctaagatctcaatccaaccattaggccaaccccaa 16074108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 19456340 - 19456389
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    ||||||| |||||||| |||||||||||||||||||||| |||| |||||    
T  19456340 atcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 33025527 - 33025474
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||||||||| |||| ||||| | ||||||||||||||||||||    
T  33025527 gaggagcacactccaagatcccaagccaaccgcgaggccaaccccaaatgggtt 33025474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 204177 - 204221
Alignment:
Q  50 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaa 94  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  204177 gagcaaactccaagatcacaagtcaaccactagaccaactccaaa 204221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 2499308 - 2499376
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||||||| |||||| ||   ||||||||| ||||||||| ||||||| |||||| |||||||||||||    
T  2499308 aatcgaacctgagactttgaaaggagcaaattccaagatcccaagtcagccactaagccaaccccaaat 2499376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 18207279 - 18207235
Alignment:
Q  22 gaggaaatcgaacatgagacctttggaggagcaaactccaagatc 66  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||    
T  18207279 gagggaatcgaacctgagacctctggaggagcaaactccaagatc 18207235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 10399825 - 10399770
Alignment:
Q  42 ctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||| || ||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  10399825 ctttgaagaagcaaactccaagatccaaagtcaaccactagaccaacaccaaatgg 10399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 18243523 - 18243488
Alignment:
Q  60 caagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18243523 caagatctcaagtcaaccactaggccaaccctaaat 18243488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 22253295 - 22253345
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||||| || |||||| |||| |||||||||| ||||||||||||||    
T  22253295 gaggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaatgg 22253345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 14656645 - 14656694
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaac 76  Q
    |||||||| |||||||||  ||||||||||||||||| ||||||| ||||    
T  14656645 aatcgaacctgagaccttgagaggagcaaactccaaggtctcaagccaac 14656694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 36895499 - 36895419
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||||||| |||||  |||||||| ||||||||||| ||||  || ||||| | ||| | ||||||||||    
T  36895499 cagagggaatcgaacatgaaaccttgagaggagcacactccaagatcccaagctaatcactacgtcaatctcaaatgggtt 36895419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 52983693 - 52983612
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52983693 cagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggttg 52983612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 25852288 - 25852208
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  25852288 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 46714462 - 46714385
Alignment:
Q  24 ggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  46714462 ggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 46714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 41621719 - 41621799
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41621719 cagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgggtt 41621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 54127466 - 54127545
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  54127466 agagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 34844888 - 34844962
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  34844888 aatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgggttg 34844962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 32986271 - 32986191
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| ||| |||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32986271 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 51535687 - 51535611
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  51535687 cagagggaatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaaccctaaatg 51535611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 13873418 - 13873497
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  13873418 cagagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgggt 13873497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 40058982 - 40059057
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||||| |||||||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  40058982 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttga 40059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 1985903 - 1985830
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||    
T  1985903 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 22625193 - 22625273
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  22625193 cagagggaatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 27528918 - 27528998
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||    
T  27528918 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccagatgggtt 27528998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 33696402 - 33696482
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| ||| |||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  33696402 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtt 33696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 35674864 - 35674944
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| || |||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  35674864 cagagggaatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 19660652 - 19660735
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||  |||| ||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  19660652 catcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 19660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 42245819 - 42245744
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||| ||||||||  ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  42245819 agagggaatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 13584372 - 13584454
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| |||||| |||||||| |||||| |||||||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  13584372 gacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatgg 13584454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 34835608 - 34835527
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||| |||||| |||| |||||||||| |||||||||||||    
T  34835608 gacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 35229235 - 35229172
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccc 90  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 35229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 13550266 - 13550200
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  13550266 tgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaatggattga 13550200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 20566424 - 20566346
Alignment:
Q  20 cagaggaaatcgaacatgag-acctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||||| |||  |||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  20566424 cagagggaatcgaacctgatcacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 20566346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 5609332 - 5609405
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||  || | ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  5609332 aatcgaacctgagaccactgaatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 43719195 - 43719264
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  43719195 aatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaaccactagaccaaccccaaatg 43719264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 45787824 - 45787902
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||| |||||||| ||||| || |||||||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  45787824 catcagagggaatcgaacctgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaaccccaaatg 45787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 19220606 - 19220528
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||||||||| ||| |||||  |||||||| |||||||||||| ||||||||||| | ||||||| |||||||||    
T  19220606 agaggaaatcgaacctgaaaccttgagaggagcacactccaagatcttaagtcaaccaccatgccaacctcaaatgggt 19220528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 32942447 - 32942369
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||||||  |||||||| | | |||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  32942447 catcagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaagccaaccactagaccaaccccaaat 32942369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 33992693 - 33992620
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| | |||||| |||||||||||||||||||||| |||  ||||||||||| |||||| |||||||||    
T  33992693 aatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatgggtt 33992620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 44343588 - 44343507
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtc-aaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||| ||||||| |||||||||||||||||| |||| | ||||||||| |||||||||||| ||||    
T  44343588 cagagggaatcgaacttgagtcctttgggggagcaaactccaagatcccaagccaaaccactagcccaaccccaaataggtt 44343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 54497093 - 54497174
Alignment:
Q  19 tcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||||||||||||||||| |  |||||| | |||||||  ||||||  ||||||||||||||||| ||||||||||    
T  54497093 tcagaggaaatcgaacatgagaccctcagaggagaatactccaatgtctcaaaccaaccactaggccaacctcaaatgggtt 54497174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 13771595 - 13771687
Alignment:
Q  9 gagatggacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    ||||| ||||||||||| |||||||  |||||||||  || ||||||||| ||||||| |||| ||||||  || ||||||||||||||||||    
T  13771595 gagattgacatcagagggaatcgaatttgagaccttgagatgagcaaacttcaagatcccaagccaaccatcagaccaaccccaaatgggttg 13771687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 55961883 - 55961939
Alignment:
Q  38 agacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaa 94  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 2351087 - 2351020
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaa 87  Q
    |||||| |||||||| |||||||| |||||||||||||| ||||||  |||| |||||||||||||||    
T  2351087 cagagggaatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactaggccaa 2351020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 34722219 - 34722164
Alignment:
Q  45 tggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||    
T  34722219 tggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaataggtt 34722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 41085103 - 41085024
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||  |||||||||| |||||||   ||||| | |||||||||||||||||||||||||||  ||||||||||||    
T  41085103 catcagagagaatcgaacattagaccttgaaaggaggacactccaagatctcaagtcaaccactagatcaaccccaaatg 41085024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 7392093 - 7392143
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  7392093 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 40252365 - 40252295
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| |||||||||  ||| |||| ||||||||||  ||||||||| ||||| ||||||||||||||    
T  40252365 aatcgaacttgagaccttgagagaagcacactccaagattccaagtcaactactagaccaaccccaaatgg 40252295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 36131640 - 36131713
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||| | ||||||| | |||||||| ||| ||||  |||||||| ||||||||||||||||||    
T  36131640 aatcgaacctgagacatctggaggaacgaactccaaaatcccaagcaaaccactatgccaaccccaaatgggtt 36131713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 49287925 - 49287872
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccact 80  Q
    |||||||| |||||||| |||||||||||||||||||||| |||  ||||||||    
T  49287925 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 10125823 - 10125783
Alignment:
Q  53 caaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  10125823 caaactccaagatcccaagtcaaccactaggccaactccaa 10125783  T

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Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 4911965 - 4911926
Alignment:
Q  51 agcaaactccaagatctcaagtcaaccactaggccaaccc 90  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  4911965 agcaaactccaagatcttaagtcaaccactaagccaaccc 4911926  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 43352437 - 43352520
Alignment:
Q  10 agatggacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    |||| |||| |||||  |||||||| ||||  |||  ||||||||||||||| ||||||||| |||||| ||| ||||||||||    
T  43352437 agattgacaccagagagaatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaaccattagaccaaccccaa 43352520  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 9646336 - 9646414
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||||||  |||| |||||||||||||   ||||||| |||| |||||| |||  |||||||||| ||||||||||||    
T  9646336 catcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaaccccaaat 9646414  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 12500181 - 12500227
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatc 66  Q
    |||||| |||| ||| ||||||||||| |||||||||||||||||||    
T  12500181 cagagggaatcaaacctgagacctttgaaggagcaaactccaagatc 12500227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 13716601 - 13716651
Alignment:
Q  50 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| ||||||| |||||||| ||||||||||||||||  ||||||||||    
T  13716601 gagcacactccaatatctcaagccaaccactaggccaacaacaaatgggtt 13716651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 31334611 - 31334545
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    |||||||| |||||||||  ||| |||| ||||||| ||| ||| ||||||||||||| ||||||||    
T  31334611 aatcgaacttgagaccttaagagaagcacactccaatatcccaaatcaaccactaggcgaaccccaa 31334545  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 18875634 - 18875719
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||||| |||||||| ||||| ||||| || | ||||||| || ||| |||  ||||||||| | ||||| ||||||||||    
T  18875634 gacatcagagggaatcgaacctgagatctttgaagaaacaaactctaaaatcccaaaccaaccactatgtcaaccacaaatgggtt 18875719  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 20078114 - 20078163
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaac 76  Q
    |||| ||| |||||||| |||||||||||||||||||||| |||| ||||    
T  20078114 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 25969652 - 25969700
Alignment:
Q  47 gaggagcaaactccaagat-ctcaagtcaaccactaggccaaccccaaa 94  Q
    ||||||||||||||||||| | ||| ||||||| |||||||||||||||    
T  25969652 gaggagcaaactccaagatccccaaatcaaccagtaggccaaccccaaa 25969700  T

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Target: scaffold0576 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 5205 - 5285
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  5205 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 5285  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 3734746 - 3734826
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  3734746 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 3734826  T

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Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 18532190 - 18532104
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  18532190 gacatctgagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 18532104  T

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Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 34237778 - 34237858
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34237778 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34237858  T

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Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 42643242 - 42643321
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||  |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42643242 agagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 42643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 24018465 - 24018380
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| ||||    
T  24018465 gacattagaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactagatcaaccccaaataggtt 24018380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 4718723 - 4718643
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4718723 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4718643  T

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Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 28193552 - 28193472
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  28193552 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 28193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 39349334 - 39349254
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  39349334 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 19471687 - 19471608
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19471687 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 19542611 - 19542532
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19542611 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 19590085 - 19590164
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||| ||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19590085 cagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 27746465 - 27746535
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  27746465 aatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 2618264 - 2618183
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| ||||||||   |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2618264 cagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2618183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 20305979 - 20305906
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||  |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  20305979 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 20305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 21092612 - 21092539
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||  |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  21092612 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 21092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 32879357 - 32879277
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| ||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  32879357 cagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 7558066 - 7558148
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    ||||||||||||||  |||||| | |||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||    
T  7558066 cagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggttga 7558148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 8387567 - 8387644
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||||||| ||||||| |  ||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  8387567 cagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaaccccaaatgg 8387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 34694706 - 34694776
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||| | |||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  34694706 aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaatgg 34694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 8042724 - 8042655
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||| |||||| |||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagatcccaagccaagcactaggtcaaccccaaatgg 8042655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 15259529 - 15259606
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||||| |||||||| |||||||||||| ||||||||| |||  |||||||||| ||||||||||||||    
T  15259529 cagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatgg 15259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 28964104 - 28964033
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||||||||||| |||||  ||||||||||||| ||||||||||  |||||||||| |||||||||||||||    
T  28964104 aatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatggg 28964033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42328082 - 42328004
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||| ||| ||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  42328082 cagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaaccccaaatgggt 42328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 264523 - 264597
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||| |||||||| ||||| || ||||||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  264523 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 651398 - 651324
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||| |||||||| ||||| || ||||||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  651398 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 837133 - 837059
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||| |||||||| ||||| || ||||||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  837133 agagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaacgccaaat 837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 28088357 - 28088283
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||  |||||||| |||| || |||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  28088357 aatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaaccccagatgggttg 28088283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 2166775 - 2166695
Alignment:
Q  22 gaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaac--cactaggccaaccccaaatgggtt 100  Q
    |||| |||||||| |||||||||||||| |||||||||||||||| |||  ||||  |||| |||||||||||||||||||    
T  2166775 gagggaatcgaacctgagacctttggagaagcaaactccaagatcccaaaccaactgcactgggccaaccccaaatgggtt 2166695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 26168978 - 26169051
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||| |||||||||  |||||||||||||||||||| ||||  ||||||||||||||||| |||||||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaaccctaaatgggtt 26169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 30911386 - 30911455
Alignment:
Q  26 aaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||| ||||||| |||||  |||||||||||||||||||||||| |||| || ||||||||||||||||    
T  30911386 aaatcaaacatgaaaccttgagaggagcaaactccaagatctcaaatcaatcattaggccaaccccaaat 30911455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 41070832 - 41070767
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaacccca 92  Q
    |||||||| |||||||||  ||| |||| ||||||||||| |||||||||||||||||||||||||    
T  41070832 aatcgaacttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 21603301 - 21603241
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaa 87  Q
    |||||||| |||||||| ||||||||||||||| |||||| |||| |||||||||||||||    
T  21603301 aatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 21667625 - 21667551
Alignment:
Q  23 aggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||||||| ||| | |||||||||||||| |||||||||  |||| |||||||||| |||||| |||||||    
T  21667625 aggaaatcgaacctgaaatctttggaggagcaacctccaagattccaagccaaccactagaccaacctcaaatgg 21667551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 3403632 - 3403705
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||| |||||||  || |||||||||||||||||||| | ||||| | ||||||||| ||||||||||    
T  3403632 aatcgaacataagaccttgagatgagcaaactccaagatctcaggccaaccccaaggccaacctcaaatgggtt 3403705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 14633032 - 14632975
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaacc 77  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||    
T  14633032 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 4698841 - 4698916
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccc 90  Q
    |||| |||||| |||||||| |||||||| || ||||||||||||||||||| |||  ||||| || |||||||||    
T  4698841 gacaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaaaccaaccgctgggccaaccc 4698916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 15974976 - 15974906
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||||||| |||||||||  |||||||| ||||||||||| ||||| ||||||||||||||||  |||||||    
T  15974976 aatcgaacttgagaccttgagaggagcatactccaagatcccaagt-aaccactaggccaaccttaaatggg 15974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 20469994 - 20469944
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaag 71  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||| ||||    
T  20469994 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaag 20469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 36848899 - 36848949
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||||||||||| | | |||||||||||||| |||||||||||||||    
T  36848899 gaggagcaaactccaaaaacccaagtcaaccactatgccaaccccaaatgg 36848949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 3794869 - 3794792
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| || |||||||||||||||  |||||||||||| |||||||  ||| |||||| |||| ||||| |||||||    
T  3794869 cagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 3794792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 9047421 - 9047462
Alignment:
Q  40 acctttggaggagcaaactccaagatctcaagtcaaccacta 81  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  9047421 acctttggaggagcaaactccaagatctcaaaccaaccacta 9047462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 33585746 - 33585819
Alignment:
Q  16 acatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaacc 89  Q
    |||| |||||||||||||| ||| || ||  |||||||| |||| ||||||||||  |||||||||||||||||    
T  33585746 acataagaggaaatcgaacctgaaactttgagaggagcacactctaagatctcaaaccaaccactaggccaacc 33585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 34639345 - 34639406
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||||||  |||||||| ||||||||||| |||| |||||||||| | ||||||||||||    
T  34639345 tgagaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaatgg 34639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 8765649 - 8765700
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaag 71  Q
    |||||| |||||||| ||||| || ||| |||||||||||||||||||||||    
T  8765649 cagagggaatcgaacctgagatctctgggggagcaaactccaagatctcaag 8765700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 11714939 - 11715010
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaac 88  Q
    |||||| || |||||||| ||| | |||  ||| ||||||||||||||||||||  ||||||||||||||||    
T  11714939 catcagggggaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 5202208 - 5202289
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||| ||||||||| |||||| ||  || ||||||||| |||||||| ||  |||| | ||| |||||||||||||    
T  5202208 gacatcagagaaaatcgaacttgagactttgagatgagcaaacttcaagatcttaaaccaactattagaccaaccccaaatg 5202289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 39317067 - 39317022
Alignment:
Q  51 agcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||| ||||||| ||||||||||||||||||| |||||| ||||||    
T  39317067 agcacactccaatatctcaagtcaaccactagaccaacctcaaatg 39317022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 34571641 - 34571597
Alignment:
Q  51 agcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||| ||| ||| |||||||||||||||||| |||||||||||||    
T  34571641 agcacacttcaaaatctcaagtcaaccactaagccaaccccaaat 34571597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 2751349 - 2751269
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  2751349 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 21217953 - 21218036
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21217953 catcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 21218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 40543033 - 40543114
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  40543033 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 40543114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 7175985 - 7176065
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  7175985 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 7275355 - 7275275
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  7275355 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2103133 - 2103054
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  2103133 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 23854467 - 23854394
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 40332182 - 40332097
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||    
T  40332182 gacaccagaggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgggtt 40332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 10091266 - 10091186
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  10091266 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 10091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 22119966 - 22119890
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22119966 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 22638370 - 22638290
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||| | |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  22638370 cagagggaatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaaccccaaatgggtt 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 7799955 - 7800034
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  7799955 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 18044184 - 18044105
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| || ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  18044184 agagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 2344370 - 2344296
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2344370 aatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 2344296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 28089899 - 28089817
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| ||||||  ||||||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28089899 gacaccagagggtatcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 28089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17197073 - 17197153
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||    
T  17197073 cagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggtt 17197153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 32849652 - 32849589
Alignment:
Q  37 gagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  32849652 gagacctctggaggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgggtt 32849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 9718105 - 9718187
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| |||||| |||||||| |||||| |||||||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  9718105 gacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatgg 9718187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31713018 - 31713100
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    ||||||||||| | | |||||||| | |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  31713018 cagaggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggttga 31713100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 1469187 - 1469114
Alignment:
Q  23 aggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||| |||||||||  || || ||||||||||||| ||||||||||||||||||||||||||||||    
T  1469187 aggaaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaaccccaaatg 1469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 17212120 - 17212051
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  17212120 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 11997927 - 11997847
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| | |||||||||||||||||||| |||| |||||||||| |||||| ||||||||||    
T  11997927 cagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 13332546 - 13332622
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| ||||| || ||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13332546 cagagggaatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 19421314 - 19421230
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||| |||| |||||||||| |||||||| | |||||||||||||||||||| |||| ||||||||| | |||||||||||||||    
T  19421314 gacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgggt 19421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 25333489 - 25333417
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||| |||||||| ||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  25333489 atcgaacctgagacctctggagaagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 25333417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 27009429 - 27009357
Alignment:
Q  28 atcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||||| |||||||| |||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  27009429 atcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaaccccaaatgggtt 27009357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 27312229 - 27312150
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| ||| |||| | |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  27312229 agagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 27312150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 42913641 - 42913716
Alignment:
Q  25 gaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||| |||||||| | |||||||||||||||||||| |||| |||||||||||||||||  |||||||||    
T  42913641 gaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccgaaaatgggtt 42913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 9683888 - 9683822
Alignment:
Q  36 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  9683888 tgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaaccgcaaatggattga 9683822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 8435818 - 8435895
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||||||| | ||| |||   ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  8435818 cagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaaccccaaatgg 8435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 21835229 - 21835152
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||| |||| ||||||||||| |||||| ||||||    
T  21835229 cagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccctaaatgg 21835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 43785429 - 43785502
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||||||||||||||| ||| |||||| |||| |||||| |||| ||||||||||||||||    
T  43785429 aatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaaccccaaatgggtt 43785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 22299927 - 22299863
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggc 84  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  22299927 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 22299863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 28647047 - 28646967
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||||  ||| |||| ||||||||||| |||||||| ||||||||||||||||||| ||||    
T  28647047 cagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaataggtt 28646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 21370674 - 21370595
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||| | || ||||| ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  21370674 agagggaatcgaacctgagacatctgaaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 21370595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 39145800 - 39145855
Alignment:
Q  45 tggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  39145800 tggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggtt 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22703569 - 22703503
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccacta 81  Q
    |||| |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||    
T  22703569 gacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 31197662 - 31197588
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||| ||| |||||| | |||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  31197662 aatcaaacctgagacatctggatgagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggttg 31197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 12211658 - 12211735
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||||||||| ||| ||||| |||  |||||||| |||||||||||  ||| |||||||||||||||||||||||||    
T  12211658 cagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 27704077 - 27704004
Alignment:
Q  23 aggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||| |||||||| || ||||||||||| |||||||||||| |||||||| | ||||| |||||||    
T  27704077 aggaaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaaccactggaccaactccaaatg 27704004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 22696398 - 22696322
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||| ||| |||||||||  |||||||| ||||||||||| ||| |||||||||||||||||||| ||||    
T  22696398 cagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccctaatg 22696322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 42814947 - 42814867
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    |||| |||||| |||||||| |||||| |   |||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  42814947 gacaccagagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaaccactaagccaactccaaat 42814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5844654 - 5844569
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    |||||| ||||||||||| |  ||||||  || ||||||||| ||| ||||||||||||| |||||||||| | ||||||||||||    
T  5844654 catcagtggaaatcgaacctctgaccttaagatgagcaaacttcaaaatctcaagtcaactactaggccaatctcaaatgggttga 5844569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 21574233 - 21574305
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||| || ||||||  |||||||| ||||||| ||| |||  |||||||||||||||||||||||||||    
T  21574233 aatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaatgggt 21574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 31273992 - 31273936
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaac 76  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||| |||||||||    
T  31273992 cagagggaatcgaacttgagagctctggaggagcaaactccaagatcccaagtcaac 31273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 23012632 - 23012707
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||| |||| ||| | |||||| ||||| |||||||||||||||| |||| |||||||| ||||||||| |||||    
T  23012632 agagggaatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccactgggccaaccctaaatg 23012707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 28003889 - 28003838
Alignment:
Q  45 tggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||||||||||||||||||| |||| ||||||||||  ||||||||||||    
T  28003889 tggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatg 28003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 38864602 - 38864645
Alignment:
Q  53 caaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  38864602 caaactcaaagatctcaagtcaaccactaggtcaaccccaaatg 38864645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 3950918 - 3950988
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagat-ctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||||||||| ||  ||||||||  ||||||||| |||||| |||||||||| |||||||||||||    
T  3950918 aatcgaacatgagacattgagaggagcacgctccaagattctcaagccaaccactagaccaaccccaaatg 3950988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 23330871 - 23330941
Alignment:
Q  29 tcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||||  |||||||| |||| || ||| |||| |||||||||||| ||||||||||||||    
T  23330871 tcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaaccccaaatgggt 23330941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 22264620 - 22264705
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||||||  |||||||||  |||||||||||||||||||  |||  |||||  | |||||||||||||||||||    
T  22264620 gacaccagagggaatcgaatctgagaccttgagaggagcaaactccaagattccaaaccaacccttcggccaaccccaaatgggtt 22264705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 35173150 - 35173190
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaa 55  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  35173150 gacatcagaggaaatcaaacctgagacctttggaggagcaa 35173190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 577727 - 577672
Alignment:
Q  50 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgactt 105  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||||| ||| ||||    
T  577727 gagcaaactctaagatcccaagcaaaccactaggccaaccccaaatgagttcactt 577672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 24686132 - 24686167
Alignment:
Q  48 aggagcaaactccaagatctcaagtcaaccactagg 83  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24686132 aggagcaaactccaagatcccaagtcaaccactagg 24686167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 47380946 - 47380903
Alignment:
Q  50 gagcaaactccaagatctcaagtcaaccactaggccaaccccaa 93  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||    
T  47380946 gagcaaactacaaaatctcaagccaaccactaggccaaccccaa 47380903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 674555 - 674605
Alignment:
Q  25 gaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaa 75  Q
    |||||||||| |||||||||  |||||||| ||||||| ||||||||||||    
T  674555 gaaatcgaacttgagaccttgagaggagcacactccaaaatctcaagtcaa 674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 14199790 - 14199848
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccac 79  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||  ||| ||||||||    
T  14199790 agagggaatcgaacctgagacctctggaggaggaaactccaagattccaaatcaaccac 14199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 31481124 - 31481063
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactag 82  Q
    |||||||||| ||| | |||| ||  |||||||| ||||||| |||||||||||||||||||    
T  31481124 agaggaaatccaacttaagactttaagaggagcacactccaaaatctcaagtcaaccactag 31481063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 654827 - 654863
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaa 56  Q
    |||||| |||||||| |||||||||||||||||||||    
T  654827 cagagggaatcgaacctgagacctttggaggagcaaa 654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 3951110 - 3951190
Alignment:
Q  17 catcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctc-aagtcaaccactaggccaaccccaaatg 96  Q
    |||||||| ||| |||||  ||||| ||  |||||||| ||||||||||| | ||| |||||||||| |||||||||||||    
T  3951110 catcagagaaaagcgaacccgagactttgagaggagcacactccaagatccccaagccaaccactagaccaaccccaaatg 3951190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 9769637 - 9769585
Alignment:
Q  47 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||||| ||||||||||  ||| ||||||| ||| ||||||||||||||||    
T  9769637 gaggagcacactccaagattccaaatcaaccattagcccaaccccaaatgggt 9769585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 36173112 - 36173036
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    ||||| |||||||| ||| |||||  || || |||||||||| ||| |||||||| ||  |||||||||||||||||    
T  36173112 agagggaatcgaacctgaaaccttgagatgaacaaactccaaaatcccaagtcaatcataaggccaaccccaaatgg 36173036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 43617438 - 43617474
Alignment:
Q  64 atctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||||||||||| |||||||||||    
T  43617438 atctcaagccaaccactaggccaactccaaatgggtt 43617474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 15360221 - 15360301
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  15360221 cagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 12591710 - 12591631
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  12591710 agagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 9239049 - 9238968
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9239049 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttg 9238968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 28672146 - 28672061
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||||||| | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672146 gacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 28672061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 654269 - 654349
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  654269 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 22576141 - 22576061
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||  |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  22576141 cagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 11007232 - 11007159
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||    
T  11007232 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgggtt 11007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 34147420 - 34147340
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||| | |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34147420 cagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 34160036 - 34159956
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||| | |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  34160036 cagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34159956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 8479391 - 8479308
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||| ||||||||||||||| ||| | |||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  8479391 gacaccagaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatggg 8479308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 11448938 - 11448871
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaa 94  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  11448938 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 9844017 - 9843935
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||| |||||||| |||||| |||||||| | |||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  9844017 gacaccagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 9843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 13753303 - 13753233
Alignment:
Q  31 gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||| |||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  13753303 gaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggttg 13753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 3222758 - 3222837
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| || ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  3222758 cagagggaatcgaacctgagacctctg-aggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggtt 3222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 21982450 - 21982521
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatggg 98  Q
    |||||||| | |||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  21982450 aatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatggg 21982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 33499554 - 33499468
Alignment:
Q  15 gacatcagaggaaatc-gaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||| |||| |||| |||||||||  |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  33499554 gacaccagagggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggtt 33499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 5360195 - 5360274
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| | ||| |||||||||||||||| |||| ||||||| |||||||| |||||||||||    
T  5360195 agagggaatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaactccaaatgggtt 5360274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 21148634 - 21148713
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| || |  |||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  21148634 agagggaatcgaacttgagacctctgaaaaagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 21148713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 9208319 - 9208246
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||||  |||||||||||||||||||| |||  ||||||||||  ||||||||||||||||    
T  9208319 aatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatgggtt 9208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14212966 - 14212890
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| | || |||||| |||| ||| ||||||||    
T  14212966 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccgagccaaccattaggtcaatcccaaatg 14212890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 1345009 - 1344934
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 97  Q
    |||||| |||||||| |||||||| ||||||| |||||||||||||| ||   ||||||||||| |||||||||||||    
T  1345009 cagagggaatcgaacctgagacctctggaggaacaaactccaagatccca--ccaaccactaggtcaaccccaaatgg 1344934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 17081172 - 17081258
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||| |||||| |||| ||| |||||| | ||||||||||||||||||||||  ||| |||||||||| | |||| |||||||||||    
T  17081172 gacaccagagggaatcaaacttgagacatctggaggagcaaactccaagatcctaagccaaccactagactaacctcaaatgggttg 17081258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 9690766 - 9690846
Alignment:
Q  25 gaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttgactt 105  Q
    |||||||||| | |||||| |||| ||||||||||||| |||||||  ||||||||||| ||||||||  |||||| ||||    
T  9690766 gaaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactaggtcaaccccaggtgggttcactt 9690846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 17706437 - 17706489
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccac 79  Q
    |||||||| |||||| | |||||||||||||||||||||| ||||||||||||    
T  17706437 aatcgaacttgagacttctggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 3433602 - 3433651
Alignment:
Q  26 aaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaa 75  Q
    ||||||||| |||||||||  ||||||||||||||||| |||||||||||    
T  3433602 aaatcgaacctgagaccttgagaggagcaaactccaaggtctcaagtcaa 3433651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 33718588 - 33718661
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||| || ||||| || ||||||||||||| |||  |||||||||| ||||||| |||||||||    
T  33718588 aatcgaacctgagatctctggagaagtaaactccaagatcccaaaccaaccactagaccaaccctaaatgggtt 33718661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 31039093 - 31039014
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||| ||| ||||| |||||| |||||||||||||||||   ||| |||| ||| || ||||||||||||||||    
T  31039093 agagggaatcaaacttgagatctttggtggagcaaactccaagattcaaagccaactactgggtcaaccccaaatgggtt 31039014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 10377759 - 10377714
Alignment:
Q  50 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaat 95  Q
    ||||| |||||||||||||||| |||| ||| ||||||||||||||    
T  10377759 gagcacactccaagatctcaagccaacaactgggccaaccccaaat 10377714  T

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Target: scaffold0068 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 41768 - 41847
Alignment:
Q  21 agaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41768 agagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 41847  T

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Target: scaffold0459 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 10816 - 10892
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10816 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

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Target: scaffold0366 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 12123 - 12199
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12123 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

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Target: scaffold0366; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 9422 - 9498
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9422 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

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Target: scaffold0026 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 97489 - 97569
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  97489 cagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggtt 97569  T

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Target: scaffold0199 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 8537 - 8610
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  8537 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8610  T

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Target: scaffold0623 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 1179 - 1255
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 96  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  1179 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

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Target: scaffold0049 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 66829 - 66756
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||    
T  66829 aatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

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Target: scaffold0328 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 15065 - 14985
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| ||| |||| |||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  15065 cagagggaattgaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

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Target: scaffold0070 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 40399 - 40319
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||| |||||||| |||||||| || |||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  40399 cagagggaatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 40319  T

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Target: scaffold0460 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 8302 - 8383
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttg 101  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| | || |||||||||  ||||||||||||||||||    
T  8302 cagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggttg 8383  T

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Target: scaffold0051 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 52994 - 53073
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggt 99  Q
    |||||| |||||||| |||  ||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  52994 cagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggt 53073  T

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Target: scaffold0717 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 76 - 150
Alignment:
Q  15 gacatcagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaacc 89  Q
    ||||| ||||| |||||||| |||||||| |||| ||||||||||||||||| |||| |||||||||||||||||    
T  76 gacataagagggaatcgaacctgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaacc 150  T

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Target: scaffold0217 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 7434 - 7512
Alignment:
Q  22 gaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||| ||||| || |||||||||||||||||||||| |||| |||| |||||||||||||||||| ||||    
T  7434 gagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccccaaataggtt 7512  T

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Target: scaffold0240 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 12884 - 12957
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||||||| ||||| || ||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||    
T  12884 aatcgaacctgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaatcccaaataggtt 12957  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 27843 - 27768
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggttga 102  Q
    ||||||||  ||||||||  |||||||||||||||| ||| |||  |||||||||| |||||||||||||||||||    
T  27843 aatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggttga 27768  T

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Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 26673 - 26746
Alignment:
Q  27 aatcgaacatgagacctttggaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 100  Q
    |||| |||||||||||| | ||  ||||||||||||||||  ||| |||||| |||||||||||||||||||||    
T  26673 aatcaaacatgagacctcttgaaaagcaaactccaagatcctaagccaaccagtaggccaaccccaaatgggtt 26746  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 161883 - 161832
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatctcaag 71  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||    
T  161883 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaag 161832  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 20296 - 20250
Alignment:
Q  20 cagaggaaatcgaacatgagacctttggaggagcaaactccaagatc 66  Q
    |||||| |||| ||| ||||||||||| |||||||||||||||||||    
T  20296 cagagggaatcaaacctgagacctttgaaggagcaaactccaagatc 20250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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