View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9286_low_40 (Length: 201)
Name: NF9286_low_40
Description: NF9286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9286_low_40 |
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Alignment Details
Target: chr3 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 52409858 - 52409693
Alignment:
| Q |
22 |
aaacttgactctagtttatattataataaaaaacactcaagtagtagcagttgctattattctatatatcttgattcttgatagtagttgtgtttaaaca |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52409858 |
aaacttgactctagtttatattataataaaaaacactcaagtagtagcagttgctattattctatatatcttgattcttgatagtagttgtgtttaaaca |
52409759 |
T |
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| Q |
122 |
tggccaactaatctcttgaatttgagcacaaaaaacatcatattccacgcctttcctcttctctgc |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52409758 |
tggccaactaatctcttgaatttgagcacaaaaaacatcatattccacgcctttcctcttctctgc |
52409693 |
T |
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