View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9287_low_12 (Length: 494)

Name: NF9287_low_12
Description: NF9287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9287_low_12
NF9287_low_12
[»] chr8 (40 HSPs)
chr8 (8-379)||(28260027-28260399)
chr8 (91-343)||(28074555-28074806)
chr8 (79-361)||(29291794-29292076)
chr8 (375-477)||(28263694-28263796)
chr8 (157-361)||(6888080-6888281)
chr8 (80-361)||(12774654-12774935)
chr8 (81-342)||(5153800-5154062)
chr8 (80-346)||(35135231-35135499)
chr8 (169-361)||(14424712-14424904)
chr8 (183-343)||(30543802-30543962)
chr8 (159-358)||(30850989-30851188)
chr8 (80-361)||(27097611-27097893)
chr8 (209-361)||(10867011-10867163)
chr8 (179-343)||(11437460-11437625)
chr8 (159-323)||(16052166-16052331)
chr8 (159-359)||(28902114-28902314)
chr8 (159-349)||(16054329-16054519)
chr8 (159-357)||(28291990-28292187)
chr8 (159-284)||(13583409-13583534)
chr8 (228-306)||(31436557-31436635)
chr8 (159-323)||(24696642-24696807)
chr8 (186-361)||(32239310-32239486)
chr8 (226-288)||(12358697-12358759)
chr8 (226-283)||(12357574-12357631)
chr8 (159-361)||(12956512-12956706)
chr8 (162-305)||(28859131-28859275)
chr8 (90-358)||(13529926-13530194)
chr8 (90-358)||(13619465-13619733)
chr8 (244-356)||(24584698-24584811)
chr8 (159-361)||(22894421-22894622)
chr8 (227-306)||(26882486-26882566)
chr8 (245-316)||(31232124-31232193)
chr8 (264-354)||(5570136-5570226)
chr8 (281-361)||(14977118-14977199)
chr8 (9-64)||(23876516-23876571)
chr8 (248-355)||(41505516-41505623)
chr8 (19-60)||(22892738-22892779)
chr8 (272-361)||(28901343-28901432)
chr8 (212-288)||(29047261-29047338)
chr8 (19-60)||(30850551-30850592)
[»] chr1 (40 HSPs)
chr1 (78-361)||(26102080-26102363)
chr1 (101-349)||(31313587-31313835)
chr1 (100-354)||(27461011-27461266)
chr1 (159-361)||(30675507-30675709)
chr1 (159-361)||(11769883-11770086)
chr1 (119-361)||(18795204-18795447)
chr1 (167-341)||(25727806-25727981)
chr1 (167-341)||(25736214-25736389)
chr1 (83-361)||(18391105-18391386)
chr1 (110-359)||(26854160-26854407)
chr1 (159-333)||(52271134-52271308)
chr1 (159-361)||(19257695-19257895)
chr1 (119-358)||(21548674-21548913)
chr1 (159-361)||(25126503-25126705)
chr1 (182-361)||(15298782-15298961)
chr1 (160-361)||(18300893-18301095)
chr1 (142-358)||(15416845-15417062)
chr1 (159-361)||(25494378-25494571)
chr1 (212-361)||(8247599-8247749)
chr1 (167-361)||(26657499-26657693)
chr1 (170-341)||(25730471-25730643)
chr1 (186-359)||(34381733-34381909)
chr1 (100-197)||(34935166-34935262)
chr1 (159-318)||(30781826-30781985)
chr1 (159-361)||(50047204-50047400)
chr1 (91-210)||(31319433-31319551)
chr1 (264-357)||(13807747-13807840)
chr1 (133-361)||(23223434-23223665)
chr1 (162-263)||(23519661-23519761)
chr1 (117-268)||(25373862-25374013)
chr1 (291-361)||(12810345-12810415)
chr1 (8-60)||(21549225-21549277)
chr1 (280-361)||(19884195-19884276)
chr1 (8-60)||(14744932-14744984)
chr1 (179-263)||(23521639-23521722)
chr1 (9-60)||(50047663-50047714)
chr1 (19-60)||(25778312-25778353)
chr1 (19-60)||(34533206-34533247)
chr1 (381-433)||(11199966-11200018)
chr1 (381-433)||(50391954-50392006)
[»] chr4 (46 HSPs)
chr4 (78-306)||(31859708-31859937)
chr4 (142-361)||(46647219-46647437)
chr4 (181-361)||(9288233-9288413)
chr4 (167-354)||(15192233-15192420)
chr4 (102-347)||(26159793-26160036)
chr4 (179-316)||(29437539-29437676)
chr4 (80-361)||(21077256-21077537)
chr4 (162-357)||(19601825-19602020)
chr4 (143-358)||(10576479-10576694)
chr4 (135-349)||(21167764-21167979)
chr4 (159-318)||(34864185-34864342)
chr4 (159-319)||(17026586-17026746)
chr4 (176-357)||(18444277-18444458)
chr4 (158-361)||(25315120-25315323)
chr4 (119-358)||(13275591-13275833)
chr4 (84-306)||(33519108-33519331)
chr4 (190-361)||(23353646-23353815)
chr4 (167-283)||(13064527-13064643)
chr4 (100-358)||(17339644-17339902)
chr4 (158-315)||(5676268-5676426)
chr4 (90-354)||(16442078-16442343)
chr4 (219-346)||(20044216-20044343)
chr4 (167-361)||(27302801-27302994)
chr4 (107-278)||(32021900-32022069)
chr4 (158-239)||(7024107-7024188)
chr4 (213-361)||(9782926-9783075)
chr4 (159-311)||(17187248-17187398)
chr4 (119-200)||(22343803-22343884)
chr4 (159-281)||(12111217-12111337)
chr4 (251-361)||(22119669-22119779)
chr4 (244-347)||(10320193-10320297)
chr4 (237-288)||(12243694-12243745)
chr4 (291-361)||(24925828-24925898)
chr4 (169-263)||(47024665-47024758)
chr4 (159-256)||(5906652-5906749)
chr4 (243-284)||(13206649-13206690)
chr4 (100-229)||(22119776-22119904)
chr4 (241-348)||(4732786-4732893)
chr4 (9-60)||(5676767-5676818)
chr4 (135-284)||(30624966-30625115)
chr4 (273-361)||(1676299-1676387)
chr4 (273-361)||(1682827-1682915)
chr4 (225-278)||(6817706-6817759)
chr4 (9-62)||(10577032-10577085)
chr4 (159-263)||(18898104-18898207)
chr4 (369-437)||(26473662-26473729)
[»] chr2 (42 HSPs)
chr2 (80-361)||(24047405-24047686)
chr2 (132-361)||(17152176-17152406)
chr2 (100-361)||(21848905-21849164)
chr2 (100-361)||(18236133-18236394)
chr2 (182-359)||(19541062-19541239)
chr2 (81-349)||(39730482-39730751)
chr2 (159-311)||(27417152-27417305)
chr2 (159-358)||(18818723-18818927)
chr2 (134-361)||(30998794-30999021)
chr2 (157-361)||(21505026-21505231)
chr2 (181-284)||(17415075-17415177)
chr2 (227-361)||(34063798-34063937)
chr2 (100-358)||(18117009-18117266)
chr2 (173-345)||(15454443-15454606)
chr2 (157-347)||(31262036-31262224)
chr2 (132-276)||(17862518-17862662)
chr2 (159-349)||(24188001-24188194)
chr2 (212-357)||(27917925-27918071)
chr2 (179-279)||(1732656-1732756)
chr2 (179-275)||(14921948-14922044)
chr2 (242-363)||(28278395-28278517)
chr2 (159-341)||(1733143-1733316)
chr2 (159-361)||(35707826-35708028)
chr2 (212-355)||(19949496-19949640)
chr2 (162-305)||(25474116-25474259)
chr2 (244-359)||(35031727-35031843)
chr2 (273-360)||(21843006-21843093)
chr2 (161-343)||(22510987-22511169)
chr2 (259-361)||(32276503-32276605)
chr2 (159-315)||(16593640-16593796)
chr2 (377-433)||(19548183-19548239)
chr2 (225-343)||(17240812-17240928)
chr2 (207-343)||(22388695-22388827)
chr2 (225-284)||(28413918-28413977)
chr2 (214-361)||(15829157-15829292)
chr2 (9-60)||(21504066-21504117)
chr2 (248-286)||(23255631-23255669)
chr2 (8-61)||(15453989-15454042)
chr2 (19-60)||(18235809-18235850)
chr2 (301-354)||(29647577-29647630)
chr2 (312-344)||(32703977-32704009)
chr2 (220-276)||(34077046-34077102)
[»] chr5 (43 HSPs)
chr5 (100-354)||(26070504-26070758)
chr5 (159-361)||(7742759-7742961)
chr5 (100-363)||(19763716-19763984)
chr5 (135-361)||(16634069-16634296)
chr5 (161-361)||(20694663-20694863)
chr5 (182-361)||(24410842-24411021)
chr5 (167-361)||(24841776-24841970)
chr5 (158-347)||(11274218-11274408)
chr5 (100-278)||(17695293-17695464)
chr5 (100-322)||(18178162-18178385)
chr5 (161-341)||(22229847-22230027)
chr5 (163-363)||(25594585-25594786)
chr5 (159-361)||(17027550-17027752)
chr5 (160-361)||(20083488-20083691)
chr5 (133-361)||(24517377-24517597)
chr5 (134-306)||(11997757-11997931)
chr5 (226-358)||(15697293-15697425)
chr5 (243-323)||(25367655-25367735)
chr5 (101-274)||(25943702-25943875)
chr5 (159-319)||(26329959-26330117)
chr5 (179-361)||(19331534-19331715)
chr5 (207-361)||(18222516-18222671)
chr5 (134-361)||(16622541-16622759)
chr5 (216-333)||(30790827-30790944)
chr5 (180-361)||(17381954-17382127)
chr5 (273-361)||(23157792-23157880)
chr5 (159-361)||(12339904-12340106)
chr5 (81-195)||(24130817-24130932)
chr5 (272-361)||(25680619-25680708)
chr5 (245-350)||(29150882-29150986)
chr5 (242-357)||(15205670-15205786)
chr5 (212-286)||(25075254-25075329)
chr5 (212-286)||(25133223-25133298)
chr5 (159-281)||(30072218-30072341)
chr5 (159-285)||(22643794-22643920)
chr5 (167-315)||(22754963-22755112)
chr5 (225-282)||(24279581-24279638)
chr5 (225-282)||(24382576-24382633)
chr5 (247-323)||(16603590-16603667)
chr5 (272-359)||(22967845-22967932)
chr5 (9-60)||(25594141-25594192)
chr5 (405-433)||(8215124-8215152)
chr5 (159-235)||(18452701-18452777)
[»] chr6 (33 HSPs)
chr6 (100-361)||(16439482-16439742)
chr6 (81-333)||(26499658-26499910)
chr6 (119-319)||(9942999-9943199)
chr6 (159-361)||(17860338-17860540)
chr6 (100-361)||(26512609-26512869)
chr6 (100-361)||(26517725-26517985)
chr6 (183-349)||(12972298-12972464)
chr6 (159-316)||(9396496-9396652)
chr6 (212-361)||(32930415-32930564)
chr6 (207-323)||(24617572-24617688)
chr6 (158-361)||(14924306-14924509)
chr6 (159-266)||(33638394-33638501)
chr6 (225-288)||(15178102-15178165)
chr6 (159-300)||(24507332-24507473)
chr6 (159-355)||(15574953-15575149)
chr6 (263-358)||(1755555-1755650)
chr6 (225-357)||(14768224-14768356)
chr6 (265-361)||(20495790-20495885)
chr6 (225-288)||(15165788-15165851)
chr6 (13-60)||(30235860-30235907)
chr6 (9-59)||(16174840-16174890)
chr6 (172-298)||(22559116-22559241)
chr6 (162-361)||(30355349-30355539)
chr6 (8-60)||(16528227-16528279)
chr6 (212-358)||(15998537-15998684)
chr6 (244-359)||(17198737-17198845)
chr6 (159-202)||(33638268-33638311)
chr6 (381-439)||(15092102-15092160)
chr6 (244-345)||(26518507-26518608)
chr6 (119-200)||(32930295-32930375)
chr6 (8-64)||(9396082-9396138)
chr6 (32-60)||(12971867-12971895)
chr6 (24-60)||(26499357-26499393)
[»] chr3 (47 HSPs)
chr3 (90-349)||(23908091-23908350)
chr3 (183-361)||(26387758-26387936)
chr3 (157-361)||(21829020-21829224)
chr3 (159-361)||(11474869-11475072)
chr3 (159-361)||(19219100-19219303)
chr3 (177-361)||(8402459-8402642)
chr3 (119-318)||(18474236-18474435)
chr3 (110-275)||(26418829-26418994)
chr3 (160-344)||(19285139-19285322)
chr3 (197-359)||(26297774-26297934)
chr3 (133-341)||(10341838-10342038)
chr3 (159-354)||(21017907-21018102)
chr3 (108-361)||(33577757-33578004)
chr3 (212-335)||(26797191-26797313)
chr3 (234-343)||(30493228-30493338)
chr3 (213-361)||(11521163-11521311)
chr3 (242-361)||(13911288-13911408)
chr3 (159-361)||(1475169-1475372)
chr3 (132-343)||(5632405-5632607)
chr3 (97-284)||(21813586-21813775)
chr3 (159-354)||(25883133-25883328)
chr3 (163-316)||(25919365-25919509)
chr3 (157-318)||(25188823-25188985)
chr3 (207-361)||(33914504-33914654)
chr3 (263-332)||(16970291-16970360)
chr3 (158-255)||(16970591-16970688)
chr3 (159-343)||(28422494-28422677)
chr3 (172-361)||(19263809-19263990)
chr3 (244-316)||(27415236-27415309)
chr3 (214-361)||(12573313-12573461)
chr3 (214-361)||(13549777-13549925)
chr3 (253-361)||(19545967-19546075)
chr3 (9-60)||(10342332-10342383)
chr3 (309-361)||(12409481-12409533)
chr3 (24-60)||(14280792-14280828)
chr3 (381-437)||(37626644-37626700)
chr3 (243-349)||(2729591-2729698)
chr3 (9-60)||(19542579-19542630)
chr3 (159-258)||(19543013-19543112)
chr3 (81-198)||(21653531-21653650)
chr3 (219-286)||(26484767-26484834)
chr3 (291-357)||(4775729-4775795)
chr3 (215-361)||(27374398-27374543)
chr3 (367-437)||(43481617-43481687)
chr3 (9-61)||(21653948-21654000)
chr3 (8-60)||(22488355-22488407)
chr3 (19-63)||(27415691-27415735)
[»] chr7 (50 HSPs)
chr7 (158-342)||(5312674-5312858)
chr7 (90-361)||(18496588-18496859)
chr7 (159-359)||(30405621-30405819)
chr7 (182-357)||(3268878-3269053)
chr7 (179-323)||(24596913-24597057)
chr7 (162-344)||(12358655-12358836)
chr7 (159-361)||(29544542-29544745)
chr7 (195-361)||(20461573-20461739)
chr7 (212-341)||(8308974-8309103)
chr7 (167-347)||(9761313-9761493)
chr7 (158-361)||(1074475-1074679)
chr7 (159-361)||(20470699-20470902)
chr7 (132-358)||(22532507-22532732)
chr7 (159-347)||(9801764-9801952)
chr7 (182-349)||(23124935-23125103)
chr7 (159-361)||(7142121-7142323)
chr7 (91-354)||(2353062-2353326)
chr7 (231-349)||(17881460-17881578)
chr7 (148-278)||(14649609-14649732)
chr7 (159-306)||(21471874-21472021)
chr7 (157-357)||(7372455-7372654)
chr7 (159-361)||(22067692-22067898)
chr7 (90-288)||(25706250-25706448)
chr7 (162-232)||(21545719-21545789)
chr7 (247-361)||(4828814-4828926)
chr7 (207-361)||(7815346-7815501)
chr7 (212-361)||(1255155-1255305)
chr7 (226-283)||(7326827-7326884)
chr7 (273-361)||(21545803-21545891)
chr7 (213-280)||(3487309-3487376)
chr7 (216-341)||(10292797-10292923)
chr7 (159-343)||(4977710-4977894)
chr7 (8-57)||(9552725-9552774)
chr7 (8-60)||(9760676-9760728)
chr7 (80-358)||(2351023-2351301)
chr7 (272-343)||(37144961-37145032)
chr7 (9-55)||(7777580-7777626)
chr7 (7-60)||(9801118-9801171)
chr7 (269-349)||(2632436-2632516)
chr7 (8-60)||(5312265-5312317)
chr7 (309-349)||(19140020-19140060)
chr7 (309-349)||(20739419-20739459)
chr7 (159-354)||(46054728-46054920)
chr7 (279-342)||(7956223-7956286)
chr7 (9-60)||(17880430-17880481)
chr7 (8-57)||(24596482-24596531)
chr7 (375-436)||(31412559-31412620)
chr7 (20-60)||(4829388-4829428)
chr7 (179-263)||(7494818-7494901)
chr7 (159-235)||(20017103-20017178)
[»] scaffold0188 (1 HSPs)
scaffold0188 (159-323)||(26844-27009)
[»] scaffold0171 (2 HSPs)
scaffold0171 (159-365)||(21416-21623)
scaffold0171 (159-256)||(6324-6420)
[»] scaffold0011 (1 HSPs)
scaffold0011 (159-354)||(228076-228269)
[»] scaffold0190 (1 HSPs)
scaffold0190 (159-361)||(11587-11789)
[»] scaffold0043 (1 HSPs)
scaffold0043 (196-361)||(58768-58934)
[»] scaffold0386 (3 HSPs)
scaffold0386 (211-361)||(13012-13163)
scaffold0386 (19-60)||(8228-8269)
scaffold0386 (19-60)||(11258-11299)
[»] scaffold0337 (2 HSPs)
scaffold0337 (159-300)||(1892-2033)
scaffold0337 (8-60)||(3722-3774)
[»] scaffold0065 (2 HSPs)
scaffold0065 (159-300)||(12328-12469)
scaffold0065 (8-60)||(12855-12907)
[»] scaffold0002 (1 HSPs)
scaffold0002 (212-288)||(447072-447149)
[»] scaffold1026 (1 HSPs)
scaffold1026 (216-343)||(1780-1907)
[»] scaffold0185 (1 HSPs)
scaffold0185 (225-354)||(1473-1602)
[»] scaffold0282 (1 HSPs)
scaffold0282 (133-241)||(22477-22584)
[»] scaffold0650 (1 HSPs)
scaffold0650 (159-263)||(5659-5762)


Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 28260027 - 28260399
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggaggaggagaaacataccctgggtgaattttgcatttttcgtcttttttcga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28260027 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggaggaggacaaacataccctgcgtgaattttgcatttttcgtcttttttcga 28260126  T
Q  108 gcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaata-ttg 206  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||    
T  28260127 gcgttcttccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttataagaactattgatcttcaatatttg 28260226  T
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28260227 atatacttgatcctccacgtgatgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 28260326  T
Q  307 cgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattgagatcaactaggattggag 379  Q
    | | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28260327 cctaaattacaacgactaaaatgaaaataatacaaaatgttccaccaaccattgagatcaactaggattggag 28260399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 91 - 343
Target Start/End: Complemental strand, 28074806 - 28074555
Alignment:
Q  91 ttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacca 190  Q
    |||||||| ||||||||  |||| | | |||||||||||  | |||| ||||||||||||| ||| ||||||||||||||  ||||| |  |||| ||||    
T  28074806 ttttcgtcctttttcgaaagttctttcttcttgaaatgccttagaacatgagatgaattttccccaacttgtattatctttcaaaacctcgtaaggacca 28074707  T
Q  191 ttgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtct 290  Q
     ||||||||| | || |||| ||||||||| ||  |||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||      
T  28074706 ctgatcttcattcttcatatccttgatccttcatttgatgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacctatggagttg 28074607  T
Q  291 catgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    |||||||||||||||| ||||||| ||||||||  |||||||| |||||||||    
T  28074606 catgatttaggataaaagtgaattgcaacgact-caatgaaaacaatacaaaa 28074555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 79 - 361
Target Start/End: Complemental strand, 29292076 - 29291794
Alignment:
Q  79 tgaattttgcatttttcgtct-tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaac 177  Q
    |||||||| || ||||||||  ||||||| |||||| ||| ||||| |||| | ||||| |||| ||||||||||  |   || | || |||||||| ||    
T  29292076 tgaattttacaattttcgtccctttttcgtgcgttcttccgtcttgcaatgaattggaatttgaaatgaatttttttcactttctgttgtcttcaaagac 29291977  T
Q  178 tttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaac 277  Q
     ||||||||||||||||||||||||||| |||| || ||| || |||||||| ||||||||| | |||||||||||||||| |||||||||||||||||     
T  29291976 cttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgatatcttgttttgccgatttacatgatttcttactaaaaagactcaaaat 29291877  T
Q  278 acctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || |||  |||  ||||||||||||||||  || |||||||||||| ||||||||| |||| ||||  |||| |||||||||||    
T  29291876 acttataaagttgcatgatttaggataaaactgcattacaacgactcaaatgaaaa-aatataaaaaattcctcaaaccattga 29291794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 375 - 477
Target Start/End: Original strand, 28263694 - 28263796
Alignment:
Q  375 tggaggaaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttaggtaaatatgtgttgttgtgaaacatgacttcaatggaag 474  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  28263694 tggaggaaatgttggatatataaaagaggtgattcatatatctaatgttttaaggtttcaggtaaatatgtgttgttgtgaaacatgacatcaatggaag 28263793  T
Q  475 gaa 477  Q
    |||    
T  28263794 gaa 28263796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 6888080 - 6888281
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    ||||||||| |||||||| || || ||||||||||||||||||||| || |||| || ||| || |||||||||  |||||||  |||||||||||||||    
T  6888080 acttgtattgtcttcaaagacattttaagaaccattgatcttcaatcttcatatcctcgatactgcacgtgatggtttgttttgttgatttacatgattt 6888179  T
Q  257 ctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacc 356  Q
    |||||||||| |||||||||||||  ||||||  |||||||||||||| |  |||||||||| |||| ||||||||| ||||||||||||| | | ||||    
T  6888180 ctcactaaaatgactcaaaacacc--tggagttgcatgatttaggatagaactgaattacaatgactcaaatgaaaa-aatacaaaatgtttctctaacc 6888276  T
Q  357 attga 361  Q
    |||||    
T  6888277 attga 6888281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 361
Target Start/End: Original strand, 12774654 - 12774935
Alignment:
Q  80 gaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttccc-gacttgtattatcttcaaaaact 178  Q
    |||||||||| ||||||||  ||||| ||||||| ||| |||||||||||  || || ||||||||||||||||||  |||| |||| |||||||| |      
T  12774654 gaattttgcacttttcgtcgcttttcaagcgttcttccgtcttgaaatgccttgaaatttgagatgaatttttcccaaacttctattgtcttcaaata-- 12774751  T
Q  179 ttctaagaaccattgatcttcaatattga-tatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaag-actcaaaa 276  Q
    || |||| |||||||||||||||| |||| |||  |||||| ||||||||||| |||||||| | ||||||||| |||||| ||||||||| ||| ||||    
T  12774752 ttttaag-accattgatcttcaatcttgattatctttgatcttccacgtgatgacttgtttttccgatttacattatttcttactaaaaagtactaaaaa 12774850  T
Q  277 cacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||||  |  ||||||||||||||||  | |||||||| |||| |||| ||||||||| ||||||| |  |||||||||||    
T  12774851 cacctatggtattgcatgatttaggataaaactaaattacaatgactcaaataaaaataatataaaatgtacgtcaaaccattga 12774935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 81 - 342
Target Start/End: Complemental strand, 5154062 - 5153800
Alignment:
Q  81 aattttgcatttttcgtct-tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    ||||||||| ||||||||  |||||||||| ||| ||| ||||| ||||   |||||||||| |||||||||   |   || |||| ||||||||||| |    
T  5154062 aattttgcagttttcgtccctttttcgagcattcttccgtcttgcaatgtcttggaacttgaaatgaattttattcatgttatattgtcttcaaaaacct 5153963  T
Q  180 tctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacac 279  Q
    || || || |||||||||||||| || |||| || |||||| ||| | |||||||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  5153962 tccaataatcattgatcttcaatcttcatatcctcgatccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacac 5153863  T
Q  280 ctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    |||| ||||   |||||||| ||||||  |||||||||| ||||  |||||||||||||||||    
T  5153862 ctatcgagttgaatgatttaagataaaactgaattacaatgactcgaatgaaaataatacaaa 5153800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 80 - 346
Target Start/End: Original strand, 35135231 - 35135499
Alignment:
Q  80 gaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    |||||||||| ||||| || |||||| ||||||| |||||||||||||||  ||||||||  |||||| ||||||  ||||||| | ||||||||||| |    
T  35135231 gaattttgcacttttcatcctttttcaagcgttcttccatcttgaaatgccttggaacttaggatgaaattttcctaacttgtactgtcttcaaaaacct 35135330  T
Q  180 tctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctc--actaaaaagactcaaaac 277  Q
     |||| |||||||||| |||| | |  |||  ||  ||||||||||||||||||||||||   ||||||| |||||||||  |  |||||||||||||||    
T  35135331 cctaataaccattgattttcattctccataccctcaatcctccacgtgatgtcttgttttgtcgatttacctgatttctccaaaaaaaaagactcaaaac 35135430  T
Q  278 acctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgt 346  Q
    || | ||||||  ||||||||||||||||  |||||||||| ||||  | | |||| ||||||||||||    
T  35135431 acatgtggagttgcatgatttaggataaaaatgaattacaatgactcgagtaaaaacaatacaaaatgt 35135499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 169 - 361
Target Start/End: Original strand, 14424712 - 14424904
Alignment:
Q  169 ttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaag 268  Q
    ||||||||| |||||||||||||||||||||||| ||  |||  |  ||||| | | || ||||||||||| | |||||||||||||||||||||||||     
T  14424712 ttcaaaaaccttctaagaaccattgatcttcaatcttcttatcatatatccttcccttgttgtcttgttttgccgatttacatgatttctcactaaaaaa 14424811  T
Q  269 actcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||  ||||||||||||||||  ||||||||||||||||  |||||||||||||||  ||||||||  ||| |||| ||||| |||||||||||    
T  14424812 acctaaaacacctatggagttgcatgatttaggataaaactgaattacaacgactcgaatgaaaaccatataaaaagttcctcaaaccattga 14424904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 30543962 - 30543802
Alignment:
Q  183 aagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||||||||| ||||||| || |||| ||  ||||| || ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  30543962 aagaaccattgaacttcaatcttcatatcctcaatccttcatgtgatatcttgttttaccgatttacatgatttctcaccaaaaagactcaaaacaccta 30543863  T
Q  283 tggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    |  | |  |||||||||||||||| |||||||||||| ||| ||||||||| |||||||||    
T  30543862 tataattgcatgatttaggataaaagtgaattacaacaactcaaatgaaaacaatacaaaa 30543802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 159 - 358
Target Start/End: Original strand, 30850989 - 30851188
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||||| |||||| || ||||||||||| |||||||||||| || |||| ||||||||| |||  ||||||||| |||  ||||||||| |||||||    
T  30850989 ttgtattatattcaaagacattctaagaaccgttgatcttcaatcttcatatccttgatccttcactagatgtcttgctttgatgatttacacgatttct 30851088  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    ||||| | |||  |||||||||||| ||||  ||||||||||||||||  ||||||||||||| |  ||||||||||||| ||||  |||| ||||||||    
T  30851089 cactagatagatccaaaacacctattgagttgcatgatttaggataaatctgaattacaacgattcgaatgaaaataatataaaaacttcctcaaaccat 30851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 80 - 361
Target Start/End: Original strand, 27097611 - 27097893
Alignment:
Q  80 gaattttgcatttttcgtct-tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaact 178  Q
    |||||||||  ||||| ||| ||||| ||| |||| ||| ||||| |||||  ||||||||||  ||||||||   | ||||||||| |||||||| ||     
T  27097611 gaattttgcggttttcatctcttttttgagtgttcttccgtcttgcaatgccttggaacttgaattgaattttcttcaacttgtattgtcttcaaagacc 27097710  T
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaa--gactcaaaa 276  Q
    |||||||||| ||| ||  ||||| || ||||  |  ||||  |||||||||||||||||| | |||||||||||||||||||||||||  ||||  |||    
T  27097711 ttctaagaactattcat--tcaatcttcatatgatcaatccatcacgtgatgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaa 27097808  T
Q  277 cacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| |||  ||||||||| ||||||  ||||||||||||||| ||||||||| ||| ||| ||||||| |||||||||||    
T  27097809 cacctatgaagttgcatgatttatgataaaactgaattacaacgactcaaatgaaaacaatgcaacatgttcctcaaaccattga 27097893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 209 - 361
Target Start/End: Complemental strand, 10867163 - 10867011
Alignment:
Q  209 atacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacg 308  Q
    ||||| |||||| |||||| | ||||||||| | || |||||||||||||||||||||||| ||||| ||||| ||||||  ||||||||  ||||||      
T  10867163 atactcgatccttcacgtggtatcttgttttgccgacttacatgatttctcactaaaaagattcaaagcacctttggagttgcatgatttgagataaaac 10867064  T
Q  309 tgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||||| ||||||||| |||||||||| |||| |||||||||||    
T  10867063 tgaattacaacgactcaaatgaaaacaatacaaaatattcctcaaaccattga 10867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 11437625 - 11437460
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctc-cacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaac 277  Q
    |||||||||||||||| ||||||| || |||| |||||||||  ||| |||||||||||||| | ||||||||||||||||||||||||||||||||||     
T  11437625 ttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaat 11437526  T
Q  278 acctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    || ||||||||  |||||  || ||| ||  ||||||| |||||||  |||||||| || ||||||    
T  11437525 acatatggagttgcatgacctatgatgaaactgaattataacgactcgaatgaaaacaacacaaaa 11437460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 323
Target Start/End: Original strand, 16052166 - 16052331
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| ||||||||| ||||| |||| ||| || |||| ||| ||||| || ||||||||||| |||  ||||||| |||||||||    
T  16052166 ttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcatatcctttatccttcatgtgatgtcttgatttgttgatttagatgatttct 16052265  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
    ||||| |||| ||||||||||||||| ||||  ||||||||| | |||| |||||||| |||||||    
T  16052266 cactacaaaacactcaaaacacctattgagttgcatgatttaaggtaaatgtgaattataacgact 16052331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 359
Target Start/End: Complemental strand, 28902314 - 28902114
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||||||||| |||| ||| || ||||  |||||||| |||||||||||| | |||  |||||||||||||||||    
T  28902314 ttgtattgtcttcaataaccttctaagaaccattggtctttaat-ttaatatcattgatccttcacgtgatgtctcgatttgttgatttacatgatttct 28902216  T
Q  259 cactaa-aaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    |||||  ||| ||| ||||||| |||||| |  | || | ||||||||| ||||||||||||||||  |||||||| ||||||| ||||| | |||||||    
T  28902215 cactactaaacactaaaaacacttatggatttgcgtggtataggataaaagtgaattacaacgactcgaatgaaaacaatacaatatgtttctcaaacca 28902116  T
Q  358 tt 359  Q
    ||    
T  28902115 tt 28902114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 349
Target Start/End: Complemental strand, 16054519 - 16054329
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||  | ||  || |||||||| ||| ||||||||||  ||| |||||||||||||| |    
T  16054519 ttgtattttcttcaacaaccttctaagaacccttgatcttcaat--tcatcaaccttgatccttcacatgatgtcttgaattaatgatttacatgattcc 16054422  T
Q  258 tcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    |||||| |||| | |||||||| ||||||||| | ||||| |||||||||  ||||||||||| |||  | |||||| |||||||||||||||    
T  16054421 tcactacaaaacaatcaaaacatctatggagttttatgatctaggataaaaatgaattacaacaactcgagtgaaaacaatacaaaatgttcc 16054329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 159 - 357
Target Start/End: Original strand, 28291990 - 28292187
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || |||||||||||||| ||||||||| || |||| ||  ||||| || |||||||||| ||||   ||||||||||| ||||    
T  28291990 ttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatccttcatgtgatgtcttattttggcgatttacatga-ttct 28292088  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||||||| || |||||||| | || |||  ||| | ||||||||||  ||||||| ||| ||| ||||||||| || | |||||||||| |||||||    
T  28292089 cactaaaaaaacacaaaacacttgtgaagttgcataaattaggataaaactgaattataacaactcaaatgaaaagaacataaaatgttcctcaaacca 28292187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 13583409 - 13583534
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| |  |||||||||||||||| |||||||  | |||| || |||||| ||| ||||||||||||||   ||||||||||||||||    
T  13583409 ttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtcttgttttgtcgatttacatgatttct 13583508  T
Q  259 cactaaaaagactcaaaacacctatg 284  Q
    ||||||||||||||||| || |||||    
T  13583509 cactaaaaagactcaaaccaactatg 13583534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 31436635 - 31436557
Alignment:
Q  228 atgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  31436635 atgtcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatttaggataaa 31436557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 159 - 323
Target Start/End: Complemental strand, 24696807 - 24696642
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| |||||||||| | || |||||||| || |||| |||||||||  | ||||||||||| |||  |||||||||||||||||    
T  24696807 ttgtattttcttcaaaaaccttctaagaacaagtggtcttcaatcttcatatccttgatcctttatgtgatgtcttgatttgttgatttacatgatttct 24696708  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
     |||| |||| ||| ||||||||| || | |   ||||||||||||| | || |||||||||||||    
T  24696707 tactataaaacactaaaaacacctgtgaaattgtatgatttaggatagaagtaaattacaacgact 24696642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 361
Target Start/End: Complemental strand, 32239486 - 32239310
Alignment:
Q  186 aaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatg 284  Q
    ||||||||| ||||||| || |||| ||| ||||| || ||||||||| | |||    ||||||| |||||||||||| |||| ||||||||||  ||||    
T  32239486 aaccattgaacttcaatcttcatatcctttatccttcatgtgatgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatg 32239387  T
Q  285 gagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||  ||||||||| |||||| ||||||| |||||||| || | |||| ||||||| ||||| | |||||||||||    
T  32239386 gagttgcatgatttaagataaaagtgaattgcaacgactcaagtaaaaacaatacaatatgttactcaaaccattga 32239310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 12358759 - 12358697
Alignment:
Q  226 tgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12358759 tgatgtcttgtttttcagatttacataatttctcactaaaaagactcaaaacacctatagagt 12358697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 12357631 - 12357574
Alignment:
Q  226 tgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctat 283  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  12357631 tgatgtcttgtttttcagatttacataatttctcactaaaaagactcaaaacacctat 12357574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 12956706 - 12956512
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    |||||||||||| |||||| ||| || ||| ||||||||||| | || |||| |||||| || || ||||| ||||| ||||  |||||| ||||||  |    
T  12956706 ttgtattatcttaaaaaaccttccaaaaacaattgatcttcagtcttcatatccttgattcttcatgtgatatcttggtttatcgatttatatgattctt 12956607  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||        |||||||||||| ||||  |||||||||||||||| ||||||||| | ||||  | |||||| ||||||| || |||| ||||||||    
T  12956606 cacta--------caaaacacctatagagttacatgatttaggataaaagtgaattacgatgactcgagtgaaaacaatacaatattttcctcaaaccat 12956515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 305
Target Start/End: Original strand, 28859131 - 28859275
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| |||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||| || ||||||| | | |||    ||||||||||||||| ||    
T  28859131 tattgtcttcaaaaaccatctaagaaccattgatctttaatcttgatatccttgatccttcatgtgatgtttaggtttgtccatttacatgatttcttac 28859230  T
Q  262 ta-aaaagactcaaaacacctatggagtctcatgatttaggataa 305  Q
    || ||||  |||||||||| ||||| ||  | |||||||||||||    
T  28859231 tacaaaaccctcaaaacacatatggtgttgcgtgatttaggataa 28859275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 358
Target Start/End: Original strand, 13529926 - 13530194
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    |||||| || |||||| ||||||| | | |||||||||||  ||||| ||| |||||||||  ||| |||||||||  ||| |||||  || |||||| |    
T  13529926 tttttcctcctttttcaagcgttctttcgtcttgaaatgccttggaatttgggatgaatttc-cccaacttgtattgcctttaaaaagcttataagaatc 13530024  T
Q  190 attgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    |||||| |||| | || |||| | ||||||||  |  || ||||||| ||||| |||||||||||||| ||| ||||||  || |||| || ||||||||    
T  13530025 attgattttcattcttcatatcccttgatcctttatatggtgtcttgctttaccgatttacatgatttttcaataaaaaagcttaaaatacatatggagt 13530124  T
Q  289 ctcatgatttaggata-aacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
      ||||||| |||| | ||  |||||| ||| ||||  |||||||| ||||||||||||||| ||||||||    
T  13530125 tgcatgatt-aggaaataaattgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccat 13530194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 358
Target Start/End: Original strand, 13619465 - 13619733
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    |||||| || |||||| ||||||| | | |||||||||||  ||||| ||| |||||||||  ||| |||||||||  ||| |||||  || |||||| |    
T  13619465 tttttcctcctttttcaagcgttctttcgtcttgaaatgccttggaatttgggatgaatttc-cccaacttgtattgcctttaaaaagcttataagaatc 13619563  T
Q  190 attgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    |||||| |||| | || |||| | ||||||||  |  || ||||||| ||||| |||||||||||||| ||| ||||||  || |||| || ||||||||    
T  13619564 attgattttcattcttcatatcccttgatcctttatatggtgtcttgctttaccgatttacatgatttttcaataaaaaagcttaaaatacatatggagt 13619663  T
Q  289 ctcatgatttaggata-aacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
      ||||||| |||| | ||  |||||| ||| ||||  |||||||| ||||||||||||||| ||||||||    
T  13619664 tgcatgatt-aggaaataaattgaatttcaaagacttgaatgaaaacaatacaaaatgttcctcaaaccat 13619733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 24584698 - 24584811
Alignment:
Q  244 atttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    ||||||| |||||||||||| |||| |||||||| |||||| ||||  ||||||||| ||||||  |||||||||| ||||  |||||||| ||||||||    
T  24584698 atttacaagatttctcactacaaaaaactcaaaatacctatagagttgcatgatttatgataaaaatgaattacaatgactcgaatgaaaacaatacaaa 24584797  T
Q  343 atgttccacaaacc 356  Q
    |  |||| ||||||    
T  24584798 aaattcctcaaacc 24584811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 22894421 - 22894622
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||||||  ||||||||| |||||  |||||| || ||||  |||||||| || ||||| ||||| ||| | ||||||||||||||||    
T  22894421 ttgtattgtcttcaaaaaccatctaagaacaattgaa-ttcaatctttatatcattgatccttcatgtgatatcttgattttc-gatttacatgatttct 22894518  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| | || ||| |||| |||||||||||   ||||| || |||||| |||||| |||| || |  | || ||| ||||||| |||| || |||||||    
T  22894519 cactatagaacactaaaaatacctatggagttgaatgatctaagataaaagtgaatcacaatgattcgagtgtaaagaatacaatatgtacctcaaacca 22894618  T
Q  358 ttga 361  Q
    ||||    
T  22894619 ttga 22894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 26882566 - 26882486
Alignment:
Q  227 gatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||||||||| |||  |||||||||||||| ||||||| |||| | ||||||||||||||||||  |||||| |||||||||    
T  26882566 gatgtcttgatttgatgatttacatgattcctcactacaaaacaatcaaaacacctatggagttgcatgatctaggataaa 26882486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 31232193 - 31232124
Alignment:
Q  245 tttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattac 316  Q
    |||||||||||||  |||||||| || |||||||||||||||||  ||||||||||||||||  ||||||||    
T  31232193 tttacatgatttc--actaaaaaaacgcaaaacacctatggagttgcatgatttaggataaagctgaattac 31232124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 5570136 - 5570226
Alignment:
Q  264 aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    |||| |||||||||||||| | |||  |||||| ||||||||| |||||||||||| |||  | |||||| ||||||| ||||||| ||||    
T  5570136 aaaacactcaaaacacctacgaagttgcatgatataggataaaagtgaattacaacaactcgagtgaaaacaatacaatatgttcctcaaa 5570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 14977118 - 14977199
Alignment:
Q  281 tatggagtctcatgatttaggataaacgtgaattacaacgactaaaatg-aaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||  | || |||| ||||||| ||||||| |||||||||||    
T  14977118 tatggagttgcatgatttaggataaaagtgaattacaatgactcgagtgaaaaacaatacaatatgttcctcaaaccattga 14977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 23876571 - 23876516
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggaggaggag 64  Q
    ||||||| | |||| |||||||||||||||| |||| |||||||||||| ||||||    
T  23876571 acatcattacaaaacaatagaaaaacataccgtagatagaacaagaggatgaggag 23876516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 355
Target Start/End: Original strand, 41505516 - 41505623
Alignment:
Q  248 acatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    |||||||||  || ||||||||||||| ||  ||||| |||  |||||||  | || || |||||||||||| |||  ||||||||||||||||||| ||    
T  41505516 acatgatttagcaataaaaagactcaacacgtctatgaagttgcatgattaggtatgaaagtgaattacaacaactcgaatgaaaataatacaaaatatt 41505615  T
Q  348 ccacaaac 355  Q
    || |||||    
T  41505616 cctcaaac 41505623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 22892738 - 22892779
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||| ||||||||||||||| ||||    
T  22892738 aaaaaaatagaaaaacataccctagagagaacaagagaagga 22892779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 28901343 - 28901432
Alignment:
Q  272 caaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||| ||| |||||  ||| || |||||||||   ||||||||||||||  | |||||| ||||||| ||||||| |||||||||||    
T  28901343 caaaacatctaaggagttgcattatctaggataaaaacgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattga 28901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 29047261 - 29047338
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagt 288  Q
    ||||||||| ||| ||||||||||  ||  |||||||||||||| ||||||| |||| ||||||||||  ||||||||    
T  29047261 cttgatccttcacatgatgtcttgaatttatgatttacatgattcctcactacaaaacactcaaaacatatatggagt 29047338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 30850551 - 30850592
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||| |||||||||||| |||||||    
T  30850551 aaaacaatagaaaaacataccctagagagaacaataggagga 30850592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 78 - 361
Target Start/End: Complemental strand, 26102363 - 26102080
Alignment:
Q  78 gtgaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaac 177  Q
    |||||||||||| |||||||  ||||  |||||||| ||  ||||||||| |  || ||||||||||||||||| | | ||||||||| |||||||||||    
T  26102363 gtgaattttgcagttttcgttcttttctgagcgttcttcagtcttgaaattccttgaaacttgagatgaattttcctcaacttgtattgtcttcaaaaac 26102264  T
Q  178 tttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaac 277  Q
     |||||| || |||||||||||| | || |||| ||||||| | ||||||||||||||||||   ||||| || ||| ||||||||||||||||||||||    
T  26102263 cttctaaaaatcattgatcttcattcttcatatccttgatcattcacgtgatgtcttgttttgtcgatttgcacgatatctcactaaaaagactcaaaac 26102164  T
Q  278 acctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||| |||||||  |||||||||||||||| |||||||||||| |||  |||||||| ||||||||||| ||| |||||||||||    
T  26102163 acccatggagttgcatgatttaggataaaagtgaattacaacaactcgaatgaaaacaatacaaaatggtcctcaaaccattga 26102080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 101 - 349
Target Start/End: Complemental strand, 31313835 - 31313587
Alignment:
Q  101 ttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttca 200  Q
    ||||| || |||| ||| |||||||||||  ||||||||  ||| |||||||||  ||||||||| ||||||||||| || |||||| ||||||||||||    
T  31313835 ttttcaagtgttcttccgtcttgaaatgccttggaacttaggattaatttttcctaacttgtattgtcttcaaaaaccttataagaatcattgatcttca 31313736  T
Q  201 atattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttag 300  Q
     | || |||| ||| ||||| |||||||||| ||||||| |  ||||||||||||||| |||||||| |||||||||||||||| |||  ||||||||||    
T  31313735 ttcttcatattcttaatccttcacgtgatgtattgtttttccaatttacatgatttcttactaaaaaaactcaaaacacctatgaagttgcatgatttag 31313636  T
Q  301 gataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    |||||| ||||||||||||||||  || ||||| ||||||||| |||||    
T  31313635 gataaaagtgaattacaacgacttgaacgaaaacaatacaaaacgttcc 31313587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 100 - 354
Target Start/End: Original strand, 27461011 - 27461266
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||||||| | | |||||||||||  ||||||||| ||||||| || ||  ||||||||| ||||||||||| || ||||||||||||||||||    
T  27461011 tttttcgagcgttctttcgtcttgaaatgccttggaacttgtgatgaatattcccaaacttgtattgtcttcaaaaaccttttaagaaccattgatcttc 27461110  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgtttta-ctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattt 298  Q
    |   || |||| || |||| | || |||||||||||||||  | || ||||||||||||| ||||||||||||  ||||||||||| |||  ||| ||||    
T  27461111 atacttcatatcctcgatctttcatgtgatgtcttgttttttccgacttacatgatttcttactaaaaagactacaaacacctatgaagttgcataattt 27461210  T
Q  299 aggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    |||||||| |||||||| ||| |||  |||||||| ||||||||||||||| ||||    
T  27461211 aggataaaagtgaattataacaacttgaatgaaaacaatacaaaatgttcctcaaa 27461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 30675709 - 30675507
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| || | || ||||||||| ||| |||||||||   || | ||||||||||||||||    
T  30675709 ttgtattatcttcaaaaaccttctaagaaccattgat-ttcaatcttcacattcttgatccttcacatgatgtcttaaattgccgatttacatgatttct 30675611  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| ||||||||||||||||||||  |||||| ||||| ||| ||| ||||||||||||  | |||||| ||||||| ||||||| |||||||    
T  30675610 cactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtattacaacgactcgagtgaaaacaatacaatatgttcctcaaacca 30675511  T
Q  358 ttga 361  Q
    ||||    
T  30675510 ttga 30675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 11769883 - 11770086
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| || ||||  |||||| | || ||||||||||| |||   ||||||||||||||||    
T  11769883 ttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctttgatcattcatgtgatgtcttgatttttcgatttacatgatttct 11769982  T
Q  259 cact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||  |||| |||||| ||||| ||| ||| ||||||||||||||||| |||||||||||||||   | |||||| ||||||| |||||||  ||||||    
T  11769983 cactgcaaaacactcaacacacccatgaagtttcatgatttaggataaaagtgaattacaacgacacgagtgaaaacaatacaatatgttccttaaacca 11770082  T
Q  358 ttga 361  Q
    ||||    
T  11770083 ttga 11770086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 119 - 361
Target Start/End: Complemental strand, 18795447 - 18795204
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaa-ctttctaagaaccattgatcttcaatattgatatacttgat 217  Q
    |||||||||||  ||||||||  ||||| |||| ||| ||||||||| |||| ||||| | |||  |||| |||| ||||||| | || ||||  |||||    
T  18795447 tcttgaaatgccttggaactttggatgatttttccccaacttgtattgtcttaaaaaaaccttcatagaatcattcatcttcacttttcatatctttgat 18795348  T
Q  218 cctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattaca 317  Q
    ||  || ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||    |||| |||||||||| || |||||||    
T  18795347 ccatcatgtgatgtcttgttttgctgatttacacgatttctcactaaaatgactcaaaacacctatgaagctgtatgacttaggataaaagtaaattaca 18795248  T
Q  318 acgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |  ||| |||||||||  |||||||||||||| |||||||||||    
T  18795247 attactcaaatgaaaacgatacaaaatgttcctcaaaccattga 18795204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 25727806 - 25727981
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||||||| ||| |||||||||||||||||||| || |||| ||| ||||| || ||||| | ||| |||   ||||||||||||||||||||| ||    
T  25727806 tcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaa 25727905  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    || ||||||||||||||| ||||  |||||||||||||||| |||||||||||||| || | |||||| |||||||    
T  25727906 aacactcaaaacacctattgagttgcatgatttaggataaaagtgaattacaacgattagagtgaaaacaatacaa 25727981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 25736214 - 25736389
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||||||| ||| |||||||||||||||||||| || |||| ||| ||||| || ||||| | ||| |||   ||||||||||||||||||||| ||    
T  25736214 tcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaa 25736313  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    || ||||||||||||||| ||||  |||||||||||||||| |||||||||||||| || | |||||| |||||||    
T  25736314 aacactcaaaacacctattgagttgcatgatttaggataaaagtgaattacaacgattagagtgaaaacaatacaa 25736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 361
Target Start/End: Complemental strand, 18391386 - 18391105
Alignment:
Q  83 ttttgcatttttcgtc--ttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatctt-caaaaactt 179  Q
    ||||||| ||||||||  |||||||||| |||| ||||| ||||||| |  ||||||||||||| | |||||  |   ||||||| ||||  |||||| |    
T  18391386 ttttgcagttttcgtcccttttttcgagtgttcctccattttgaaataccttggaacttgagataattttttttcattttgtattgtcttaaaaaaacct 18391287  T
Q  180 tctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacac 279  Q
    | ||||||||||||||||||  | || | || ||| || || || |||||||||| |||  || |||||||||||||||  ||||||| |||| |||| |    
T  18391286 tttaagaaccattgatcttcgttttttaaatccttcattcttcatgtgatgtcttatttcgctaatttacatgatttcttcctaaaaatactctaaacgc 18391187  T
Q  280 ctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||| |  |||||| ||||||||| || ||||||||||||| |||||||||||||| |||||||| | |||||||||||    
T  18391186 ctatggaattgcatgatctaggataaaagttaattacaacgactcaaatgaaaataatataaaatgttactcaaaccattga 18391105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 359
Target Start/End: Original strand, 26854160 - 26854407
Alignment:
Q  110 gttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgata 209  Q
    |||| ||||||||| |||||  |||||||| | |||||||||   |   ||||||| |||||||| |  |||||||||||||||| ||||||| || |||    
T  26854160 gttcttccatcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcata 26854259  T
Q  210 tacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgt 309  Q
    |  |||||||| ||| | |||||||||||| | | |||||||||||||||  ||||||||||||||||| ||||| |||   |||| ||||||||||  |    
T  26854260 tcattgatccttcacttaatgtcttgttttgccggtttacatgatttctc--taaaaagactcaaaacatctatgaagttgtatgaattaggataaaatt 26854357  T
Q  310 gaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccatt 359  Q
    ||||||||||||||  |||||||| ||||||||| ||||| |||| ||||    
T  26854358 gaattacaacgacttgaatgaaaagaatacaaaaagttcctcaaaacatt 26854407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 333
Target Start/End: Original strand, 52271134 - 52271308
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || ||||||| |||||||| ||||||| || |||| || |||||| ||||||  || ||||||| | ||||||||| ||||||    
T  52271134 ttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcgatccttcacgtggcgttttgttttgccgatttacataatttct 52271233  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaa 333  Q
    |||||||||||||||||||| |||||||||  ||| ||||||||  || |||||| ||||||||| |||||||||    
T  52271234 cactaaaaagactcaaaacatctatggagttgcataatttaggaataaagtgaatgacaacgacttaaatgaaaa 52271308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 19257695 - 19257895
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || ||||||||||  ||||| |||||| || |||| || |||| | || ||||||||||||| | |  ||||||| |||||||    
T  19257695 ttgtattgtcttcaaagaccttctaagaac--ttgatgttcaatcttcatatcctcgatctttcatgtgatgtcttgttatgccaatttacacgatttct 19257792  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    ||||||||| |||||||||||||| ||| |  ||||||||||||||||   ||||||||| ||||| |||||||| |||||| || ||||| |||| |||    
T  19257793 cactaaaaatactcaaaacacctaaggacttgcatgatttaggataaaatcgaattacaatgactagaatgaaaacaatacagaaagttcctcaaatcat 19257892  T
Q  359 tga 361  Q
    |||    
T  19257893 tga 19257895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 119 - 358
Target Start/End: Complemental strand, 21548913 - 21548674
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatc 218  Q
    ||||| |||||  |||||||| | ||||||||||  | ||||||||||||||||||    |||||||||||||| | ||||||| || |||| |   ||     
T  21548913 tcttgtaatgccttggaacttcaaatgaatttttttcaacttgtattatcttcaaatgtcttctaagaaccatttagcttcaatcttcatatccacaatt 21548814  T
Q  219 ctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    ||  ||||||||||||||||| | ||||||| ||||||| ||||| |||||||| |||||| ||||||||  |||  |||||||||||  ||||||||||    
T  21548813 ctttacgtgatgtcttgtttttccgatttacttgatttcacactagaaagactccaaacacttatggagttgcattttttaggataaaactgaattacaa 21548714  T
Q  319 cgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||  |||||||| |||| |||| ||| | ||||||||    
T  21548713 cgactcgaatgaaaacaatataaaaagtttctcaaaccat 21548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 25126705 - 25126503
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| | |||||| | ||||||||||| ||||||||  | |  | |||| ||  ||||| ||||||||||||| |||| || |||||||||||||||    
T  25126705 ttgtattgtattcaaagattttctaagaactattgatctgtagtcgtcatatcctcaatccttcacgtgatgtcttatttttctaatttacatgatttct 25126606  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    || |||||||||||||||||| |||  | || ||||||||||||||||  |||||||| |||||| |||| |||| |||||||||  || | ||||||||    
T  25126605 cattaaaaagactcaaaacacatatataatcacatgatttaggataaaactgaattaccacgactcaaataaaaacaatacaaaaaatttctcaaaccat 25126506  T
Q  359 tga 361  Q
    |||    
T  25126505 tga 25126503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 15298782 - 15298961
Alignment:
Q  182 taagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacct 281  Q
    ||||||||||||||||| ||| || |||| || ||||||  || |||| ||||||||| | |||||||||||||| |||||||| |||| ||||||||||    
T  15298782 taagaaccattgatcttgaatcttcatatcctcgatcctttacatgatttcttgttttgccgatttacatgatttatcactaaatagacacaaaacacct 15298881  T
Q  282 atggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||| |||  |||||||| |||||||  | |||||||| || | ||||||| | |||||||||  |||| |||||||||||    
T  15298882 atgaagttgcatgattttggataaaacttaattacaatgattcaaatgaatacaatacaaaaacttcctcaaaccattga 15298961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 160 - 361
Target Start/End: Original strand, 18300893 - 18301095
Alignment:
Q  160 tgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctc 259  Q
    |||||| ||||||||||| ||||||||||||||| | || ||| || |||| ||||||||| |||||||||||||| |||    ||||||||||||  ||    
T  18300893 tgtattgtcttcaaaaaccttctaagaaccattggtatttaatcttcatatccttgatccttcacgtgatgtcttgatttgtctatttacatgattcatc 18300992  T
Q  260 ac-taaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    || | |||| |||||||||||||||| |||  ||||||||  |||||| || |||||||||||||  || ||||| | ||||| || |||| ||||||||    
T  18300993 actttaaaacactcaaaacacctatgaagttgcatgattttcgataaaagtcaattacaacgactttaaagaaaacagtacaatatattcctcaaaccat 18301092  T
Q  359 tga 361  Q
    |||    
T  18301093 tga 18301095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 358
Target Start/End: Original strand, 15416845 - 15417062
Alignment:
Q  142 gatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgtttta 240  Q
    |||||| ||||||| ||||| ||| |||| |||||| || ||||||||||||||||||| | || |||| | |||||||| || ||| ||||||| |||     
T  15416845 gatgaaattttcccaacttgcattgtctttaaaaaccttataagaaccattgatcttcattcttcatatcccttgatccttcatgtggtgtcttgctttg 15416944  T
Q  241 ctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    | || |||||||||||  |  ||||||||||||||||||||||  |||  ||||||||| |||||| |||||||| || || |  |||||||| |||| |    
T  15416945 ccgaattacatgatttgactataaaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaattaaaatgaattgaatgaaaacaataaa 15417044  T
Q  341 aaatgttccacaaaccat 358  Q
    ||||||| | ||||||||    
T  15417045 aaatgtttctcaaaccat 15417062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 25494378 - 25494571
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| || |||| |||| ||||  | ||||||||||| |||   ||||||||||||||||    
T  25494378 ttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatat-cttgctccttaatgtgatgtcttgatttgtcgatttacatgatttct 25494476  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||        ||||||||||||| |||  |||||||||||||||| || |||||||| |||| ||  ||||| || |||| ||||||| ||||||||    
T  25494477 cacta--------caaaacacctatgtagttgcatgatttaggataaaagtaaattacaaggactcaagagaaaacaagacaatatgttcctcaaaccat 25494568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 212 - 361
Target Start/End: Original strand, 8247599 - 8247749
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtg 310  Q
    ||||||| | |||||||||||||| |||  |||||||||||||| ||||||| |||| ||||||||||||||||||||  |||||| |||| ||||        
T  8247599 cttgatctttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaacactcaaaacacctatggagttgcatgatctagggtaaaacaa 8247698  T
Q  311 aattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| |||| || ||||||||||| || ||||||| |||||||||||    
T  8247699 aattacaatgactcaagtgaaaataataaaatatgttcctcaaaccattga 8247749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 361
Target Start/End: Complemental strand, 26657693 - 26657499
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||||||| || ||||||| ||||| |||| || || |||  ||||||||| ||| | |||||||| |||   |||||||||||||| |||||| ||    
T  26657693 tcttcaaaaaccttataagaactattga-cttcgattttcatagccttgatccttcacctaatgtcttgatttgtcgatttacatgatttttcactacaa 26657595  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || ||||||||||||||||||||  | |||| ||||||||| |||||||||||||| |  | |||||| ||||||  || |||| |||||||||||    
T  26657594 aacactcaaaacacctatggagttgcgtgatctaggataaaagtgaattacaacgaatcgagtgaaaacaatacattatattcctcaaaccattga 26657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 341
Target Start/End: Original strand, 25730471 - 25730643
Alignment:
Q  170 tcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaag 268  Q
    |||||||| ||| |||||||||||||||| ||| || || | ||||||||| || ||||| ||||| |||   ||||||||||||||||| ||| ||||     
T  25730471 tcaaaaaccttccaagaaccattgatcttaaatcttcatctccttgatccttcatgtgatatcttgatttgtcgatttacatgatttctcgctacaaaac 25730570  T
Q  269 actcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    ||||||||||||| || |||  ||||||||||||||||  |||||| ||| || |  |||||||| |||||||    
T  25730571 actcaaaacacctgtgaagttgcatgatttaggataaaattgaatttcaatgatttgaatgaaaacaatacaa 25730643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 186 - 359
Target Start/End: Complemental strand, 34381909 - 34381733
Alignment:
Q  186 aaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta---aaaagactcaaaacaccta 282  Q
    ||||||||||||||||  || |||| ||||||| | |||||||||| ||| |||   ||||||||| |||| ||||||   |||| ||||||||||||||    
T  34381909 aaccattgatcttcaaacttcatatccttgatctttcacgtgatgttttgatttgtcgatttacattatttttcactatacaaaatactcaaaacaccta 34381810  T
Q  283 tggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccatt 359  Q
    || |||  | |||||||| ||| | ||||||||||||||||  |||||||| |||| || ||||||  |||||||||    
T  34381809 tgaagttgcgtgatttagaatagaagtgaattacaacgactcgaatgaaaacaatataatatgttcttcaaaccatt 34381733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 34935166 - 34935262
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatct 197  Q
    ||||||||| |||||||| |||||||||||  | ||||||| |||||||||| ||| ||||||||||||||||||||| || |||||| |||||||||    
T  34935166 tttttcgagtgttcatccgtcttgaaatgccttagaacttgggatgaattttccccaacttgtattatcttcaaaaaccttataagaa-cattgatct 34935262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 318
Target Start/End: Complemental strand, 30781985 - 30781826
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| || |||||||| ||||||||||||  |   || ||||||||| ||| |||||||||| |||  |||||||||||||| ||    
T  30781985 ttgtattgtcttcaacaaccttttaagaacccttgatcttcaattcttc-atccttgatccttcacatgatgtcttgatttgatgatttacatgattcct 30781887  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    ||||| |||| ||||||||||||||||||||   ||||| | |||||||  ||||||||||    
T  30781886 cactacaaaacactcaaaacacctatggagttgtatgatcttggataaaactgaattacaa 30781826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 50047400 - 50047204
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| || |||| ||||||||||||||||||| |||  ||||||||| |||||||| ||||     |||   |||||||||||||    
T  50047400 ttgtattgtcttcaataaccttttaagtaccattgatcttcaatattcatacccttgatccttcacgtgatttcttc----act---ttacatgatttct 50047308  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    | ||| |||| ||||||||||  ||||||||   ||||||||||||||| ||||||||| | ||||  | |||||| ||||||| ||||| | |||| ||    
T  50047307 cgctacaaaacactcaaaacatatatggagttgtatgatttaggataaaagtgaattaccatgactcgagtgaaaacaatacaatatgtttctcaaatca 50047208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 31319433 - 31319551
Alignment:
Q  91 ttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacca 190  Q
    ||||| || |||||||||||||  |||||||||||||||  || |||||| ||| |||||  ||||||||| ||| ||||||||||  ||||||||||||    
T  31319433 ttttcatcctttttcgagcgtttttccatcttgaaatgccttgaaacttgggataaatttc-cccgacttgcattgtcttcaaaaaacttctaagaacca 31319531  T
Q  191 ttgatcttcaatattgatat 210  Q
    |||||||||| |||| ||||    
T  31319532 ttgatcttcattattcatat 31319551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 357
Target Start/End: Original strand, 13807747 - 13807840
Alignment:
Q  264 aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||||||||||||| ||||| |||  |||||||  |||| |||||||||||||||||||  |||||||| ||||||||||||||  |||||||    
T  13807747 aaaagactcaaaacaactatgaagttgcatgattagggatgaacgtgaattacaacgacttgaatgaaaacaatacaaaatgttcatcaaacca 13807840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 361
Target Start/End: Complemental strand, 23223665 - 23223434
Alignment:
Q  133 ggaacttgagatgaatttttcccgacttgtattatcttcaaaaa-ctttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgt 231  Q
    ||||||||| ||||||||||  |   ||||||| |||||||||| | ||||| |||  |||| | |||||| || |||| |||||  || || | |||||    
T  23223665 ggaacttgaaatgaatttttttcactttgtattgtcttcaaaaaaccttctatgaattattggttttcaatcttcatatccttgaatcttcatgcgatgt 23223566  T
Q  232 cttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatg- 329  Q
    ||||  ||  |||||||||||||||||||||| |||| | | ||||||||| ||||||  |||||||||||||||| || ||||||||||| |  | ||     
T  23223565 cttgacttgttgatttacatgatttctcactacaaaacattaaaaacacctttggagttgcatgatttaggataaaagtaaattacaacgaatcgagtga 23223466  T
Q  330 aaaataatacaaaatgttccacaaaccattga 361  Q
    |||| |||||||  |||||| |||||||||||    
T  23223465 aaaaaaatacaatgtgttcctcaaaccattga 23223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 23519661 - 23519761
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| ||||||| ||| ||||||||||||||| |||||||| || |||| ||||||||| ||||| |||||||| | |   |||||||||||||||||||    
T  23519661 tattgtcttcaacaaccttctaagaaccattggtcttcaat-ttcatattcttgatccttcacgtaatgtcttgatgtgtcgatttacatgatttctcac 23519759  T
Q  262 ta 263  Q
    ||    
T  23519760 ta 23519761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 25374013 - 25373862
Alignment:
Q  117 catcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttga 216  Q
    |||||||||||||  | |||||||| |||||||||   |  |||||||| |||| || ||| ||||||||||||||| |||| ||| || |||| || ||    
T  25374013 catcttgaaatgcttttgaacttgaaatgaattttcttcatcttgtattgtcttaaacaaccttctaagaaccattggtctttaatcttcatatcctgga 25373914  T
Q  217 tcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaag 268  Q
    |||| ||  |||||| || |||| | ||||||||| ||||||| ||||||||    
T  25373913 tccttcaattgatgttttcttttgccgatttacattatttctctctaaaaag 25373862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 12810415 - 12810345
Alignment:
Q  291 catgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||| |||||||||  |||||||||||||||  |||||||| ||||||| ||||||| |||||||||||    
T  12810415 catgatctaggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaaccattga 12810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 21549277 - 21549225
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||| |||||||||||||||| ||||||||||||||||||||    
T  21549277 gacatcattacaaaacaatagaaaaacataccctagagagaacaagaggagga 21549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 19884276 - 19884195
Alignment:
Q  280 ctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||||  |||||||||||||||| | |||||||| ||| |  |||||||| |||| |||| ||||| |||||||||||    
T  19884276 ctatggagttgcatgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaaccattga 19884195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 14744932 - 14744984
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||| |||||||||||||| |||||||||||||||| |||||    
T  14744932 gacatcattacaaaacaatagaaaaacatatcatagagagaacaagaagagga 14744984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 23521639 - 23521722
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta 263  Q
    ||||||||||||||| |||||||| || |||| | | ||||| |||||||||||||| | |   |||||||||||||||||||||    
T  23521639 ttctaagaaccattggtcttcaat-ttcatattccttatccttcacgtgatgtcttgatgtgtcgatttacatgatttctcacta 23521722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 50047714 - 50047663
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| | |||| |||| ||||||||||| ||||||||||||||||||||    
T  50047714 acatcattacaaaacaatataaaaacataccctagagagaacaagaggagga 50047663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25778353 - 25778312
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||| |||||||||| |||||||||    
T  25778353 aaaacaatagaaaaacataccctagagagaacgagaggagga 25778312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34533247 - 34533206
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| ||| |||||||||||| ||||||||||||||||||||    
T  34533247 aaaacaatcgaaaaacataccctagagagaacaagaggagga 34533206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 433
Target Start/End: Original strand, 11199966 - 11200018
Alignment:
Q  381 aaatgttggatatataatagaggtgattcatatatctaatgttttaaggtttt 433  Q
    ||||||||||||||||| |||||||| ||||||  ||||||  ||||||||||    
T  11199966 aaatgttggatatataagagaggtgactcatatgcctaatgccttaaggtttt 11200018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 433
Target Start/End: Complemental strand, 50392006 - 50391954
Alignment:
Q  381 aaatgttggatatataatagaggtgattcatatatctaatgttttaaggtttt 433  Q
    ||||||||||||||||| | | |||| ||||||| ||||||| ||||||||||    
T  50392006 aaatgttggatatataagatatgtgactcatatacctaatgtcttaaggtttt 50391954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 78 - 306
Target Start/End: Original strand, 31859708 - 31859937
Alignment:
Q  78 gtgaattttgcatttttcgtc-ttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaa 176  Q
    |||||||||||| |||||||| |||||||  |||||| ||| |||||||||||  |||||||||| || ||||||   |   ||||||| |||||||| |    
T  31859708 gtgaattttgcagttttcgtccttttttcacgcgttcttccgtcttgaaatgccttggaacttgaaataaattttcttcactttgtattgtcttcaaata 31859807  T
Q  177 ctttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaa 276  Q
    | ||||||||||||||||||||||||||| |||| || |||||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31859808 ccttctaagaaccattgatcttcaatattcatatcctcgatccttcacctggtgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaa 31859907  T
Q  277 cacctatggagtctcatgatttaggataaa 306  Q
    |||||||| |||  ||||||||||||||||    
T  31859908 cacctatgcagttgcatgatttaggataaa 31859937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 142 - 361
Target Start/End: Complemental strand, 46647437 - 46647219
Alignment:
Q  142 gatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttac 241  Q
    |||||||||| ||| |||||||||||||| |||||| || ||||||||||||||||||| | || ||||  |||||||  |||||||||||||||||| |    
T  46647437 gatgaattttccccaacttgtattatctttaaaaaccttttaagaaccattgatcttcatttttcatatctttgatccctcacgtgatgtcttgttttgc 46647338  T
Q  242 tgatttacatgatttctcactaaaaa-gactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    ||||||| ||||||||||  ||||||  ||||  ||||| ||||||||  |||||||||||||||| |||||||||| |||||| |||||||| ||||||    
T  46647337 tgatttatatgatttctcgataaaaataactc--aacacttatggagttgcatgatttaggataaaagtgaattacaccgactagaatgaaaacaataca 46647240  T
Q  341 aaatgttccacaaaccattga 361  Q
    |||| |||   ||||||||||    
T  46647239 aaatattcttgaaaccattga 46647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 181 - 361
Target Start/End: Complemental strand, 9288413 - 9288233
Alignment:
Q  181 ctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacc 280  Q
    ||||||||||||| |||||||| || |||| ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||||||| |||| ||     
T  9288413 ctaagaaccattggtcttcaatcttcatatccttgatccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactaaaaaaaca 9288314  T
Q  281 tatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||   ||||||||| ||||||  ||||||| || |||| ||||||||| |||||||  |||||| |||||||||||    
T  9288313 tatggaggtacatgatttatgataaaaatgaattataatgactcaaatgaaaacaatacaatttgttcctcaaaccattga 9288233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 167 - 354
Target Start/End: Complemental strand, 15192420 - 15192233
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||| ||| ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||| |||   ||||||||||||||||||||| ||    
T  15192420 tcttcaacaaccttctaagaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtcttggtttgtcgatttacatgatttctcactacaa 15192322  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    || |||||||||||||||||||   || ||| ||||||||| |||||||||||| |||  | |||||| ||||||| ||||||||||||    
T  15192321 aacactcaaaacacctatggagctgcacgatctaggataaaagtgaattacaacaacttgagtgaaaacaatacaatatgttccacaaa 15192233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 102 - 347
Target Start/End: Complemental strand, 26160036 - 26159793
Alignment:
Q  102 tttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaa 201  Q
    |||||||||||| ||| ||||||||| |  |||||||||| |||||||||   | |||| | | || |||||| || || ||||||||||||||||||||    
T  26160036 tttcgagcgttcttccgtcttgaaatcct-tggaacttgaaatgaattttcttcaacttatttgat-ttcaaagaccttataagaaccattgatcttcaa 26159939  T
Q  202 tattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttagg 301  Q
    | || |||| ||  ||||| ||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||||| |||| |||   || |||||||    
T  26159938 tcttcatatcctgaatccttcacatgatgtcttgttttgctgatctacatgatttttcactaaaaagactcaaaacacatatgaagttggataatttagg 26159839  T
Q  302 ataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    | |||  | |||||||||||||  |||||||| |||||||||||||    
T  26159838 acaaaactaaattacaacgactcgaatgaaaacaatacaaaatgtt 26159793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 179 - 316
Target Start/End: Complemental strand, 29437676 - 29437539
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    |||||||||||||||| ||||||| || |||| || |||||| ||||||||||||||| || | |||||||||||||||||| |||||||||||||||||    
T  29437676 ttctaagaaccattgaacttcaatcttcatatcctcgatccttcacgtgatgtcttgtcttgccgatttacatgatttctcattaaaaagactcaaaaca 29437577  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattac 316  Q
     ||||| |||  ||||||||||||||||  ||||||||    
T  29437576 gctatgaagttgcatgatttaggataaaactgaattac 29437539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 80 - 361
Target Start/End: Complemental strand, 21077537 - 21077256
Alignment:
Q  80 gaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    |||||||||| |||||||   |||| |||  ||| ||||||||  |||||  |||||||||| |||||||||   | | ||||||| ||||| |  || |    
T  21077537 gaattttgcagttttcgtacctttttgagtattcttccatctttcaatgccttggaacttgaaatgaattttattcaatttgtattgtcttcgattacct 21077438  T
Q  180 tctaagaaccattgatcttcaatattgatatactt-gatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    |||||||||||||||| ||||||  | ||| |||| |||||||||| || ||||||||||| |  ||||||||||||| |||||||||||||  ||||||    
T  21077437 tctaagaaccattgatattcaatcctcata-acttcgatcctccacttggtgtcttgttttgccaatttacatgatttttcactaaaaagaccaaaaaca 21077339  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| | | |||||||  ||||||  |||| ||||||||||  ||| |||||||||||||| ||| | |||||||||||    
T  21077338 cctatggaatttgatgatttgtgataaaattgaactacaacgactcgaataaaaataatacaaaaggtttctcaaaccattga 21077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 162 - 357
Target Start/End: Complemental strand, 19602020 - 19601825
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| ||||||||||| || |||||||||||| ||||||||  | |||| || |||| | |||||||||||||| |||  ||||||||||||||||||||    
T  19602020 tattgtcttcaaaaaccttttaagaaccattg-tcttcaatcatcatatcctcgatctttcacgtgatgtcttgatttgttgatttacatgatttctcac 19601922  T
Q  262 ta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    || ||||  || |||| |||||||||||  |||||||||||||||| |||||||||||| | |  |||||||| |||| |||| ||||| |||||||    
T  19601921 tagaaaacgctaaaaatacctatggagttgcatgatttaggataaaagtgaattacaacaatttgaatgaaaaaaatagaaaaagttcctcaaacca 19601825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 358
Target Start/End: Complemental strand, 10576694 - 10576479
Alignment:
Q  143 atgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttact 242  Q
    ||||||||| ||  |||||| ||  |||||||||| |||||| || ||| | |||| | | || |||| || |||||| ||| |||||||||||||| |     
T  10576694 atgaattttccctaacttgtgttgccttcaaaaaccttctaaaaatcatagttctttattcttcatatcctcgatccttcacatgatgtcttgtttttcc 10576595  T
Q  243 gatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    ||||||||| ||||||||||| ||||| |||||||||||||| |||   || |||||| ||||| ||||||||||| ||||  |||||||| ||||||||    
T  10576594 gatttacataatttctcactagaaagaatcaaaacacctatgaagttgtataatttagaataaaagtgaattacaatgactcgaatgaaaacaatacaaa 10576495  T
Q  343 atgttccacaaaccat 358  Q
    ||||||  ||||||||    
T  10576494 atgttcttcaaaccat 10576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 135 - 349
Target Start/End: Complemental strand, 21167979 - 21167764
Alignment:
Q  135 aacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtctt 234  Q
    |||||| |||||||||| ||| |||||| || | || |||||  ||||||||| ||||||| |||| | || | || || | | || ||||| |||||||    
T  21167979 aacttgggatgaattttccccaacttgtcttgtatttaaaaatattctaagaagcattgattttcattcttcacatcctcgctacttcacgttatgtctt 21167880  T
Q  235 gtttta-ctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaa 333  Q
    |||||  | |||||||||||||||||||||||||| ||||||||||||||| |||  |||  ||||||||||| || ||||||||| |||  ||||||||    
T  21167879 gttttttccgatttacatgatttctcactaaaaagtctcaaaacacctatgaagttacatattttaggataaaagtaaattacaacaactcgaatgaaaa 21167780  T
Q  334 taatacaaaatgttcc 349  Q
     |||||||||||||||    
T  21167779 caatacaaaatgttcc 21167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 34864185 - 34864342
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||| ||||||| |||||||||||||||| ||||||| |  ||||  |||||||| |||||||||||||| |||   ||||||||||||||||    
T  34864185 ttgtattgtctacaaaaaccttctaagaaccattga-cttcaatctccatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttct 34864283  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    ||||| |||| |||||||||||  ||||||| |||| |||||||||||| |||||||||||    
T  34864284 cactacaaaacactcaaaacac--atggagtttcataatttaggataaaagtgaattacaa 34864342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 319
Target Start/End: Original strand, 17026586 - 17026746
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||||||||| ||||||||||| | ||| |||  | |||||||||||||| || ||||||||||  |||   |||||||||||||| |    
T  17026586 ttgtattgtcttcaaaaactttttaagaaccattaa-cttaaattctcatatacttgatccttcatgtgatgtcttaatttgtcgatttacatgatttat 17026684  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaac 319  Q
     |||| |||| ||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  17026685 gactacaaaacactcaaaacacctatggagttgcatgatctaggataaaagtgaattacaac 17026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 357
Target Start/End: Complemental strand, 18444458 - 18444277
Alignment:
Q  176 actttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaa 275  Q
    |||||| |||||||||||||||||||| ||  |||  | |||||| |||||||||||||||||| | ||||||||||| ||| |||  |||||||| |||    
T  18444458 actttccaagaaccattgatcttcaatctttgtatcatcgatccttcacgtgatgtcttgttttgcagatttacatgacttcccacggaaaagacttaaa 18444359  T
Q  276 acacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    | |||||||||||  | ||||||||||||||  ||||||||| || ||  |||||||| | ||||||  ||||| |||||||    
T  18444358 atacctatggagttgcgtgatttaggataaaactgaattacagcggctcgaatgaaaacattacaaagagttcctcaaacca 18444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 158 - 361
Target Start/End: Original strand, 25315120 - 25315323
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| ||||||| ||| || ||||||||||| ||||| ||| || |||| ||||||||| || | ||||||||| |||   ||||||||||||| |    
T  25315120 cttgtattgtcttcaacaacattttaagaaccatttatctttaat-ttcatatccttgatccttcatgcgatgtcttgatttgtcgatttacatgattcc 25315218  T
Q  258 tcactaaaaag-actcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacc 356  Q
    |||||| |||  ||||||||| | ||||||||  |||||| |||||||||  | ||||||||||||| || |||||| ||||||| ||||||| |||| |    
T  25315219 tcactacaaattactcaaaacccatatggagttgcatgatctaggataaaacttaattacaacgactcaagtgaaaacaatacaatatgttcctcaaagc 25315318  T
Q  357 attga 361  Q
    |||||    
T  25315319 attga 25315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 13275591 - 13275833
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttca--atattgatatac-ttg 215  Q
    |||||||||||  || |||| | |||||||||| ||| ||||||||| ||||||||||  ||| ||||||||||||||||||  ||||| |||| | ||     
T  13275591 tcttgaaatgccttgtaactagggatgaattttccccaacttgtattgtcttcaaaaaacttcaaagaaccattgatcttcattatattcatatccctta 13275690  T
Q  216 atcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    ||||| |  ||| ||| ||| ||| | || |||||||||||  || |||||||||||||||||||||  ||||   ||||||| |||| || ||||||||    
T  13275691 atccttcgtgtggtgtattgctttgccgaattacatgatttagcaataaaaagactcaaaacacctacagagttgtatgatttgggatgaaagtgaatta 13275790  T
Q  316 caacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
     |||||||  |||||||| ||||||| ||||| | ||||||||    
T  13275791 taacgactcgaatgaaaacaatacaacatgtttctcaaaccat 13275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 84 - 306
Target Start/End: Complemental strand, 33519331 - 33519108
Alignment:
Q  84 tttgcatttttcgtct-tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttct 182  Q
    |||||| ||||||||  |||||| ||||||| ||  ||| |||||||  ||||| |||| |||||||||   | ||||||||| |||||||| || ||||    
T  33519331 tttgcaattttcgtccatttttcaagcgttcttctgtctggaaatgccttggaatttgaaatgaattttcttcaacttgtattgtcttcaaagaccttct 33519232  T
Q  183 aagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||| |||||||||||||  | |||| ||  || || || | ||||| ||| ||| | |||| |||||||||||||||||||||||||||||||||||    
T  33519231 aagaacgattgatcttcaatcgtcatatcctcaattcttcaagagatgttttgatttgccgattcacatgatttctcactaaaaagactcaaaacaccta 33519132  T
Q  283 tggagtctcatgatttaggataaa 306  Q
     | |||  ||||||||| ||||||    
T  33519131 cgaagttgcatgatttaagataaa 33519108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 361
Target Start/End: Complemental strand, 23353815 - 23353646
Alignment:
Q  190 attgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtc 289  Q
    ||||||||| ||| || |||| |||| |||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||  ||| |       
T  23353815 attgatctttaatcttcatatccttg-tccttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaacactcatgaatgt 23353717  T
Q  290 tcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
     || ||||||  |||||  |||||||||||||||  |||||||| ||||||||| |||||  ||||||||||    
T  23353716 gcacgattta-tataaaattgaattacaacgactcgaatgaaaacaatacaaaaagttccttaaaccattga 23353646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 13064643 - 13064527
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaa 266  Q
    |||||||| ||  ||||||||||||||| |||||||  |  ||| ||||||||| |||||||||||||| ||| |  ||||||||||||||| |||||||    
T  13064643 tcttcaaataccctctaagaaccattgaacttcaatcgtcttatccttgatccttcacgtgatgtcttgatttgccaatttacatgatttcttactaaaa 13064544  T
Q  267 agactcaaaacacctat 283  Q
     ||||||||||||||||    
T  13064543 tgactcaaaacacctat 13064527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 358
Target Start/End: Original strand, 17339644 - 17339902
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    ||||||||||| |  ||| |||||||||||  |  || ||| |||||||||| | | ||||| ||| ||||||||||  || |||||| || ||||||||    
T  17339644 tttttcgagcgcttttccgtcttgaaatgccttaaaatttgggatgaattttacacaacttgaattgtcttcaaaaatcttttaagaatcactgatcttc 17339743  T
Q  200 aatattgatata-cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattt 298  Q
    | | |  ||||  ||||||||| || ||||| ||||| |||   |||| ||| ||| |||||||||||||  |||||||||||||| | |  ||||||||    
T  17339744 attctccatatctcttgatccttcatgtgatatcttgctttgtcgatt-acacgatctctcactaaaaagcttcaaaacacctatgaaattgcatgattt 17339842  T
Q  299 aggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    ||||||||  |||||||||| ||||| ||||||||  |||||||||||||| ||| ||||    
T  17339843 aggataaaattgaattacaaagactagaatgaaaaagatacaaaatgttcctcaatccat 17339902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 315
Target Start/End: Complemental strand, 5676426 - 5676268
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| ||||||||||| ||||||||| ||||  | |||||  || |||| ||||||||| || ||||||||||| ||||   ||||||||||||      
T  5676426 cttgtattgtcttcaaaaaccttctaagaatcatttgtattcaaacttaatatccttgatccttcatgtgatgtcttgatttatcaatttacatgattca 5676327  T
Q  258 tcact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    ||||| ||||| ||||||||||||||||||||  ||  ||||||||||||  |||||||    
T  5676326 tcactaaaaaatactcaaaacacctatggagttgcacaatttaggataaaaatgaatta 5676268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 354
Target Start/End: Original strand, 16442078 - 16442343
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    ||||| ||| |||||||||||||| ||| |||||||||    ||||||||  ||| |||||  ||| | ||||||| ||||||||||| ||| ||| ||     
T  16442078 ttttttgtcctttttcgagcgttcttccgtcttgaaattgcttggaactttggataaatttcccccaaattgtattgtcttcaaaaaccttccaagtaca 16442177  T
Q  190 attgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    || |||||||| |||| | || | || |||||||| |   |||| |||||||| || ||||||||||| ||| |||||||| ||||||||| ||||||||    
T  16442178 atcgatcttcattattcaaatcccttaatcctccatgcagtgtcatgttttaccgaattacatgatttatcattaaaaagagtcaaaacacttatggagt 16442277  T
Q  289 ctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
      |||||||| | |  ||    ||||||||  |||  |||||||||||||||||||||||| ||||    
T  16442278 tgcatgatttggaaataatccaaattacaataacttgaatgaaaataatacaaaatgttcctcaaa 16442343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 346
Target Start/End: Complemental strand, 20044343 - 20044216
Alignment:
Q  219 ctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    ||||| ||| ||||||| |||||||| ||||||||||| ||| ||||||||||||||| || ||||||||  ||||||| ||||  ||  ||||||||||    
T  20044343 ctccatgtggtgtcttgctttactgaattacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaa 20044244  T
Q  319 cgactaaaatgaaaataatacaaaatgt 346  Q
     ||||  |||||||| |||| |||||||    
T  20044243 tgactcgaatgaaaacaatataaaatgt 20044216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 361
Target Start/End: Complemental strand, 27302994 - 27302801
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||||||| ||||||||||| || || |||||| || |||| ||||||| | |||||||||||||  |||   |||||||||||||  |||||| ||    
T  27302994 tcttcaaaaaccttctaagaacccttaatgttcaat-ttcatatccttgatcttgcacgtgatgtcttaatttgtcgatttacatgattcatcactacaa 27302896  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || ||| |||||||| ||| |||  |||||| ||| ||| |  |||||||||| ||||  | |||||| ||||||||||||||| |||||||||||    
T  27302895 aatactaaaaacacc-atgaagttgcatgatctagtatataattgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaaccattga 27302801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 32022069 - 32021900
Alignment:
Q  107 agcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattg 206  Q
    ||||||| |||||||||||||||  || || ||| |||||||||  ||| ||||||||| ||||||||| |||| |  |||||||||||||||| | ||     
T  32022069 agcgttcttccatcttgaaatgccttgaaatttgggatgaatttc-cccaacttgtattgtcttcaaaacctttttg-gaaccattgatcttcattcttc 32021972  T
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    |||||||||||||| ||    ||||| |||||| |  ||||||| |||||||||| ||||| ||||||||||    
T  32021971 atatacttgatccttcattgaatgtcatgttttgcctatttacaggatttctcacaaaaaatactcaaaaca 32021900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 7024107 - 7024188
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgtttt 239  Q
    |||||||||||||||| ||  ||||||||||||||| |||||||| || ||||  |||||||| ||||||||||||||||||    
T  7024107 cttgtattatcttcaagaatcttctaagaaccattggtcttcaatcttcatatctttgatccttcacgtgatgtcttgtttt 7024188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 9782926 - 9783075
Alignment:
Q  213 ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    |||||||||||| |||||||||| |||  |||||||||||||| ||||||| |||| |||| ||| |||||||||||  |||||| ||  |||||  |||    
T  9782926 ttgatcctccacatgatgtcttgatttgttgatttacatgattcctcactacaaaacactctaaaaacctatggagttgcatgatctaaaataaaactga 9783025  T
Q  312 attacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||| || |  | |||||| ||||||| ||||||| ||||| |||||    
T  9783026 attacaatgaattgagtgaaaacaatacaatatgttcctcaaactattga 9783075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 311
Target Start/End: Complemental strand, 17187398 - 17187248
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| |  |||||||||||| ||| ||||||| || |||| ||  ||| | ||| |||||| || ||||   |||||||||||||| |    
T  17187398 ttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaatcattcacttgatgtgttattttgtcgatttacatgatttat 17187299  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    ||||||||||||||  |||||||||| |||  |||||||||||||||| ||||    
T  17187298 cactaaaaagactc--aacacctatgaagttgcatgatttaggataaaagtga 17187248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 22343884 - 22343803
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttca 200  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||  || |||| ||||||| ||||||    
T  22343884 tcttgaaatggattggaacttgagatgaatttttccctacttgtattttcttcaaaaaacttataagtaccattggtcttca 22343803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 12111217 - 12111337
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    |||||||||||| |||||| || ||||||||||||| |||||||||| |||| ||||||||| ||||||||| |||| |||   |||||||| || ||||    
T  12111217 ttgtattatcttaaaaaaccttataagaaccattga-cttcaatattcatat-cttgatccttcacgtgatgacttgatttgtcgatttacaaga-ttct 12111313  T
Q  259 cacta-aaaagactcaaaacacct 281  Q
    ||||| |||| |||||||||||||    
T  12111314 cactacaaaacactcaaaacacct 12111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 22119779 - 22119669
Alignment:
Q  251 tgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcca 350  Q
    |||||||||||||||||||||||||| ||||||| |||  |||||||| || |||| || |||||||| ||||  || ||||| | |||||  ||||||     
T  22119779 tgatttctcactaaaaagactcaaaatacctatgtagttgcatgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcct 22119680  T
Q  351 caaaccattga 361  Q
    |||||||||||    
T  22119679 caaaccattga 22119669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 10320193 - 10320297
Alignment:
Q  244 atttacatgatttctcactaaaaaga-ctcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    |||||| ||||||||||||| ||| | || ||||||||||||||||  |||| | ||||||||| ||||||||||||||||  | |||||| |||||||     
T  10320193 atttacctgatttctcactacaaaaagcttaaaacacctatggagttgcatggtctaggataaaagtgaattacaacgactcgagtgaaaagaatacaat 10320292  T
Q  343 atgtt 347  Q
    |||||    
T  10320293 atgtt 10320297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 12243694 - 12243745
Alignment:
Q  237 tttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  12243694 tttaccgatttacatgatttctcactaaaatgactcaaaacacctattgagt 12243745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 24925898 - 24925828
Alignment:
Q  291 catgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||| |||||| |||||||||| ||||| ||||||||| ||||||||||||| | ||||| |||||    
T  24925898 catgatttatgataaaagtgaattacagcgactcaaatgaaaacaatacaaaatgttactcaaacgattga 24925828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 47024665 - 47024758
Alignment:
Q  169 ttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta 263  Q
    ||||||||| |||||||||||||||| ||||||| || || | ||||||||| || | ||||||||| |||   |||||||||||||||||||||    
T  47024665 ttcaaaaaccttctaagaaccattga-cttcaatcttcatgtccttgatccttcatgcgatgtcttgatttttcgatttacatgatttctcacta 47024758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 5906652 - 5906749
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||| || |||| || |||||| || ||||| ||||| |||   | ||||||||||||    
T  5906652 ttgtattatcttcaaaaaccttctaagaaccattaatcttaaatcttaatattctagatccttcatgtgatatcttggtttgtcggtttacatgattt 5906749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 13206649 - 13206690
Alignment:
Q  243 gatttacatgatttctcactaaaaagactcaaaacacctatg 284  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  13206649 gatttacatgatttctcactaaaatgactcaaaacacctatg 13206690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 22119904 - 22119776
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||||||| ||| ||||| ||||   |||||||||| || ||||||   | |||| |||| || ||||||||  ||||||||||||||||||||    
T  22119904 tttttcgagcgttcttccgtcttgcaatgacttggaacttgaaattaattttgtac-acttttattgtcctcaaaaaccctctaagaaccattgatcttc 22119806  T
Q  200 aatattgatatacttgatcctccacgtgat 229  Q
    |||||| |||| ||| ||||| ||| ||||    
T  22119805 aatattcatatccttaatccttcacttgat 22119776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 348
Target Start/End: Complemental strand, 4732893 - 4732786
Alignment:
Q  241 ctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    |||||||||||||||||||  |||||||||| ||||  | | || |||   ||| |||||||||||  | ||||||||||||| ||||||||| |||| |    
T  4732893 ctgatttacatgatttctcgttaaaaagactaaaaaagcttgtgaagttgtatggtttaggataaatttaaattacaacgactcaaatgaaaacaatata 4732794  T
Q  341 aaatgttc 348  Q
    ||||||||    
T  4732793 aaatgttc 4732786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 5676818 - 5676767
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| | |||| ||||||||||||||||||||| |||||||||||||||    
T  5676818 acatcattacaaaacaatagaaaaacataccatagaaagaacaagaggagga 5676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 284
Target Start/End: Complemental strand, 30625115 - 30624966
Alignment:
Q  135 aacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatactt-gatcctccacgtgatgtct 233  Q
    |||||| |||||||||| || | |||||| | ||||||||| |||| |||| | |||||||||||| | || | || ||| |||||||||||   |||||    
T  30625115 aacttgggatgaattttcccag-cttgtactgtcttcaaaatctttttaagtaacattgatcttcattcttcaaatcctttgatcctccacgcagtgtct 30625017  T
Q  234 tgttttactgatttacatgatttctcactaaaaagactcaaaacacctatg 284  Q
    |  |||   || ||||||||||| ||| |||||||||||||||||||||||    
T  30625016 tactttgtagaattacatgatttttcaataaaaagactcaaaacacctatg 30624966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 1676299 - 1676387
Alignment:
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||| |||||||||  |||||| |||||||||  ||||||||||  |||  |||||||| | ||||| ||||||| |||||||||||    
T  1676299 aaaacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattga 1676387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 1682827 - 1682915
Alignment:
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||| |||||||||  |||||| |||||||||  ||||||||||  |||  |||||||| | ||||| ||||||| |||||||||||    
T  1682827 aaaacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattga 1682915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 6817706 - 6817759
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    ||||||||||  |||  ||||||||||||||||||| ||||| |||||||||||    
T  6817706 gtgatgtctttatttgttgatttacatgatttctcattaaaatgactcaaaaca 6817759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10577085 - 10577032
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggaggagg 62  Q
    ||||||| | |||| |||| ||||||||||| ||||||| ||||||||||||||    
T  10577085 acatcattacaaaacaatataaaaacataccctagagaggacaagaggaggagg 10577032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 18898207 - 18898104
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| | ||||||||| || ||||||||| ||| ||||||| |  |||  || |||||| || ||||||||||| |||   ||||||||||||||||    
T  18898207 ttgtattgtattcaaaaaccttttaagaaccactga-cttcaatctgcataccctggatccttcatgtgatgtcttgatttgtcgatttacatgatttct 18898109  T
Q  259 cacta 263  Q
    |||||    
T  18898108 cacta 18898104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 437
Target Start/End: Complemental strand, 26473729 - 26473662
Alignment:
Q  369 taggattggaggaaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttaggt 437  Q
    ||||| ||||| |||  |||||||||||| ||||| || ||||||| || |||||||||||||||||||    
T  26473729 taggaatggagaaaacattggatatataagagagg-gactcatatacctgatgttttaaggttttaggt 26473662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 5e-51; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 80 - 361
Target Start/End: Complemental strand, 24047686 - 24047405
Alignment:
Q  80 gaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaac-t 178  Q
    |||||||||| |||| ||| |||||||||||||  |||||||||||||||  ||||||||| | |||||||| ||  ||||||||| |||||| |||| |    
T  24047686 gaattttgcagtttt-gtcctttttcgagcgtttttccatcttgaaatgccttggaacttgggttgaattttccctaacttgtattgtcttcacaaacct 24047588  T
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    || | ||||||||||||||||| | || |||| ||||||||| || | ||||||||||||| | |||||  | ||||||||||||||| ||| |||||      
T  24047587 ttttgagaaccattgatcttcattcttcatatccttgatccttcatgggatgtcttgttttgccgatttgtaggatttctcactaaaatgacccaaaatg 24047488  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||  ||| |||||||||||| ||||||||||| ||||  |||||||| |||||||||||||||  ||||||||||    
T  24047487 cctatggagttgcataatttaggataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttccttaaaccattga 24047405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 132 - 361
Target Start/End: Complemental strand, 17152406 - 17152176
Alignment:
Q  132 tggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgt 231  Q
    |||||| || |||||||||| ||| ||||||||||||||||||||| |||||||||||||| || |||| | || |||| ||||||||| |||  |||||    
T  17152406 tggaacatgggatgaattttccccaacttgtattatcttcaaaaaccttctaagaaccattcatattcattcttcatatccttgatccttcacacgatgt 17152307  T
Q  232 cttgttttactgatttacatgatttctcact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatga 330  Q
    |||||||| | |||||||||||||||| ||| ||||| ||||||||||| ||  ||||  ||||| ||| |||||| || |||||||||||||  |||||    
T  17152306 cttgttttgccgatttacatgatttcttactaaaaaaaactcaaaacacttacagagttgcatgaattacgataaaagttaattacaacgactcgaatga 17152207  T
Q  331 aaataatacaaaatgttccacaaaccattga 361  Q
    |||||||||||||| |||| |||||||||||    
T  17152206 aaataatacaaaatattcctcaaaccattga 17152176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 100 - 361
Target Start/End: Original strand, 21848905 - 21849164
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    ||||||||||||||||||||||| |||| |  || || ||| ||||| ||||  || ||||||||| | ||| ||||| || |||||||||||||| |||    
T  21848905 tttttcgagcgttcatccatcttaaaattccttgaaatttg-gatgagttttctccaacttgtattgtgttccaaaaccttttaagaaccattgattttc 21849003  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    | ||||  ||| ||||||||| || ||||||||||||| | | ||||||||| ||||||||||||||||||||||||  ||||||||||  |||||||||    
T  21849004 attattattatccttgatccttcatgtgatgtcttgttcttccgatttacattatttctcactaaaaagactcaaaaatcctatggagttgcatgattta 21849103  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
     ||||||  |||||||||| |||| ||| ||||| ||||||||||||||| |||||||||||    
T  21849104 tgataaaactgaattacaatgactcaaa-gaaaacaatacaaaatgttcctcaaaccattga 21849164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 100 - 361
Target Start/End: Original strand, 18236133 - 18236394
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||| | ||| ||| |||| ||||||  | |||||||| |||||||||   |  |||||||| ||||||| ||| |||||||||||||||  ||||    
T  18236133 tttttcgatcattcttccgtctttaaatgcctttgaacttgaaatgaattttcttcatcttgtattgtcttcaacaaccttctaagaaccattggccttc 18236232  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    ||| || ||||   ||||||| || ||||||||||||||| | || ||||||||||||||||||||||||||||||| || ||||||||  |||||||||    
T  18236233 aatcttcatatttgtgatccttcatgtgatgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgattta 18236332  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
     |||||| |||||||| ||| |||  |||||||| |||| ||| |||| | |||||||||||    
T  18236333 agataaaagtgaattataacaactcgaatgaaaacaatataaattgtttctcaaaccattga 18236394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 182 - 359
Target Start/End: Complemental strand, 19541239 - 19541062
Alignment:
Q  182 taagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacct 281  Q
    |||||||||||| |||||||| || |||| || |||||| ||| ||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||    
T  19541239 taagaaccattggtcttcaatcttcatatcctcgatccttcacttgatgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacct 19541140  T
Q  282 atggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccatt 359  Q
    |||||||  ||||||||||||||||  |||||||||| ||||  | |||||  ||||||||| ||||| |||||||||    
T  19541139 atggagttgcatgatttaggataaaactgaattacaatgactcgattgaaataaatacaaaaagttcctcaaaccatt 19541062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 81 - 349
Target Start/End: Complemental strand, 39730751 - 39730482
Alignment:
Q  81 aattttgcatttttcgtc-ttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    ||||||||| | |||||| ||||||  ||||||| ||| |||||||||||  ||||||||| |||||||||| ||| |||  |||| |||||||||   |    
T  39730751 aattttgcaatgttcgtccttttttttagcgttcttccgtcttgaaatgccttggaacttgggatgaattttccccaactcttattgtcttcaaaattct 39730652  T
Q  180 tctaagaaccattgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    ||||||||  |||  |||||| | || |||| | |||||||| || ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  39730651 tctaagaaatattagtcttca-tcttcatatcccttgatccttcatgtgatgtcttgttttgctgatttatatgatttctcactaaaaatactcaaaaca 39730553  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    |||   ||||  |||||||||||||||| ||||||||||||||||  ||| ||||  ||| ||||||||||    
T  39730552 cctgcagagttgcatgatttaggataaaagtgaattacaacgacttgaataaaaactatagaaaatgttcc 39730482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 311
Target Start/End: Original strand, 27417152 - 27417305
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| | ||||||||| |||| |||||||||| ||||||| ||| ||||  |||||||| || ||||||||||| |||   ||||||||||||||||    
T  27417152 ttgtattgttttcaaaaaccttcttagaaccattggtcttcaacattcatatcattgatccttcatgtgatgtcttgatttgtcgatttacatgatttct 27417251  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    ||||| |||| ||| ||||||||||||||||  |||||||||||||||| ||||    
T  27417252 cactacaaaacacttaaaacacctatggagttgcatgatttaggataaaagtga 27417305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 358
Target Start/End: Complemental strand, 18818927 - 18818723
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatact-----tgatcctccacgtgatgtcttgttttactgatttacatga 253  Q
    ||||||| |||||||| || |||||||||||||| ||||||| | || |||| ||     | ||||| ||||||||| |||||||| | |||||||||||    
T  18818927 ttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatcctatccttaatccttcacgtgatgccttgttttgccgatttacatga 18818828  T
Q  254 tttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaa 353  Q
    ||||||| |||||||||| |||||  ||||||| |  ||||||||| ||||||  | |||| |||||||| ||||||||| |||| ||||||||||  ||    
T  18818827 tttctcaataaaaagactgaaaacgtctatggacttgcatgatttatgataaaactaaatttcaacgactcaaatgaaaacaatataaaatgttccttaa 18818728  T
Q  354 accat 358  Q
    |||||    
T  18818727 accat 18818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 361
Target Start/End: Complemental strand, 30999021 - 30998794
Alignment:
Q  134 gaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtct 233  Q
    |||||||| |||||||||  ||   ||||||| ||||||| ||| ||||||||||| |||||||||||| |  |||| ||||||||| ||| |||| |||    
T  30999021 gaacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaagaacccttgatcttcaat-tacatatccttgatccttcacttgatatct 30998923  T
Q  234 tgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaa 332  Q
    || |||   ||||||||| | |  |||||| |||| ||||||||||||||||||||   ||||| |||||||||  |||| |||||||||| || |||||    
T  30998922 tgatttgtcgatttacatcactcttcactacaaaacactcaaaacacctatggagttgtatgatctaggataaaactgaagtacaacgactcaagtgaaa 30998823  T
Q  333 ataatacaaaatgttccacaaaccattga 361  Q
    | ||||||| ||||||| |||||||||||    
T  30998822 acaatacaatatgttcctcaaaccattga 30998794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 21505026 - 21505231
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    ||||||||| ||||||||||| |||| |||||||||| |||||||  || | || ||||||| | || ||||||||||  ||||  |||||||||||||     
T  21505026 acttgtattgtcttcaaaaaccttctcagaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtcttaatttatcgatttacatgattc 21505125  T
Q  257 ctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaac 355  Q
    ||||||| |||| |||||||||| ||| | |||  |||||||||||||||| || ||||| || ||||  | |||||| ||||||| ||| ||| |||||    
T  21505126 ctcactacaaaacactcaaaacatctaagaagttgcatgatttaggataaaagtaaattataaagactcgagtgaaaacaatacaatatgctcctcaaac 21505225  T
Q  356 cattga 361  Q
    ||||||    
T  21505226 cattga 21505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 17415075 - 17415177
Alignment:
Q  181 ctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacc 280  Q
    ||||||||||||||| |||||| || || | || |||||| |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||    
T  17415075 ctaagaaccattgat-ttcaatcttcatgtcctcgatccttcacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagactcaaaacacc 17415173  T
Q  281 tatg 284  Q
    ||||    
T  17415174 tatg 17415177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 361
Target Start/End: Original strand, 34063798 - 34063937
Alignment:
Q  227 gatgtcttgttttactgatttacatgatttctcact-----aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacga 321  Q
    ||||||||||||| | ||||||||||| ||||||||     ||||| ||||||||||| | ||||||  |||||||||||||||  |||||||||||| |    
T  34063798 gatgtcttgttttgccgatttacatgaattctcactcaaaaaaaaaaactcaaaacacttgtggagttgcatgatttaggataatagtgaattacaacaa 34063897  T
Q  322 ctaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||  |||||||| ||||||||| |||||||||||||||||    
T  34063898 ctcgaatgaaaacaatacaaaaagttccacaaaccattga 34063937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 100 - 358
Target Start/End: Complemental strand, 18117266 - 18117009
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||| |||| || |||||||||||||||   || ||||| || |||||||  || ||||||| | |||| |||||  |||||||||||||| ||||||    
T  18117266 tttttctagcgctcttccatcttgaaatgcctcgggacttgggaagaattttcaccaacttgtactgtcttaaaaaatattctaagaaccatttatcttc 18117167  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    | | || |||| || ||| || |||| ||| ||||||||| | |||||||||||||| |   |||||||| |||||||||| |   |||  ||| ||||     
T  18117166 atttttcatatcctcgatgcttcacgcgatatcttgttttgccgatttacatgattttttgttaaaaagattcaaaacaccaacctagttgcattattt- 18117068  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||| || ||||||||||| |||| ||||||||| ||||||||||||||  ||||||||    
T  18117067 ggattaaagtgaattacaatgactcaaatgaaaacaatacaaaatgttcgtcaaaccat 18117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 345
Target Start/End: Original strand, 15454443 - 15454606
Alignment:
Q  173 aaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactc 272  Q
    |||||||| ||||||||||| ||||| | | || |||| ||||||||| || ||||||||||||||| || ||||||| |||||||||||||||| ||||    
T  15454443 aaaacttt-taagaaccatttatctttattcttcatatccttgatccttcatgtgatgtcttgttttgctaatttacacgatttctcactaaaaaaactc 15454541  T
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatg 345  Q
    ||||||||| ||      ||||||||||||||||  |||| |||||||||| ||| ||||| |||||||||||    
T  15454542 aaaacacct-tg------catgatttaggataaaaatgaa-tacaacgactcaaaagaaaacaatacaaaatg 15454606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 31262224 - 31262036
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    |||| |||| |||||||| || | |||||||||||| ||||||||| || |||| || |||| || | ||| ||||||||||| |  ||||| |||| ||    
T  31262224 acttatattgtcttcaaagacctactaagaaccattaatcttcaatcttcatatcctcgatcttc-atgtggtgtcttgttttgccaatttagatgaatt 31262126  T
Q  257 ctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    ||||||||||||||| ||||||||| || |||  |||| ||| |||||||  |||||||||||| | | || |||||||||||||||||||    
T  31262125 ctcactaaaaagacttaaaacacctgtgaagttgcatggttt-ggataaaactgaattacaacgtccagaaagaaaataatacaaaatgtt 31262036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 276
Target Start/End: Complemental strand, 17862662 - 17862518
Alignment:
Q  132 tggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgt 231  Q
    ||||||||| |||||||||| ||| ||||||| | ||||||||||  ||||||||||||  ||| |||| | || |||| ||||||| | || |||||||    
T  17862662 tggaacttgggatgaattttccccaacttgtactgtcttcaaaaaaattctaagaaccaccgattttcattcttcatatccttgatctttcatgtgatgt 17862563  T
Q  232 cttgttttactgatttacatgatttctcactaaaaagactcaaaa 276  Q
    ||| |||| |  ||||||||||||| |||||||||| ||||||||    
T  17862562 cttattttgccaatttacatgatttttcactaaaaaaactcaaaa 17862518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 349
Target Start/End: Complemental strand, 24188194 - 24188001
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||||||||||||||| | |||| |||||||| || |||| ||||||||| || |||||| |||| ||    ||||||||||||||||    
T  24188194 ttgtattgtcttcaaaaactttctaagatctattg-tcttcaatcttcatattcttgatccttcatgtgatgccttgattggtcgatttacatgatttct 24188096  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatg---atttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    ||||| |||| ||||||||||| | ||||||   |||   |||||||||||| |||||| |||| ||||  |||||| | ||||||||| |||||    
T  24188095 cactacaaaatactcaaaacacatttggagttgaatgaatatttaggataaaagtgaatcacaatgactcgaatgaatacaatacaaaaagttcc 24188001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 357
Target Start/End: Original strand, 27917925 - 27918071
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaa-aagactcaaaacacctatggagtctcatgatttaggataaacgtg 310  Q
    ||||||||| ||  |||||||||| |||   |||| ||||||||||| |||| | || | ||||||||||||||||||  |||||||||| ||||| |||    
T  27917925 cttgatccttcatctgatgtcttgatttgtcgattgacatgatttcttactatagaatagtcaaaacacctatggagttgcatgatttagtataaaagtg 27918024  T
Q  311 aattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||||||||||| ||||||||| |||||  || ||||| |||||||    
T  27918025 aattacaacgactcaaatgaaaacaatacccaacgttcctcaaacca 27918071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 1732756 - 1732656
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    ||||||||| |||||||||||||| || |||| ||| ||||| || |||||||||||||||    ||||||||||||||| || ||||||||||||||||    
T  1732756 ttctaagaatcattgatcttcaatcttcatattcttaatccttcatgtgatgtcttgttttgtcaatttacatgatttcttaccaaaaagactcaaaaca 1732657  T
Q  279 c 279  Q
    |    
T  1732656 c 1732656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 14921948 - 14922044
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaa 275  Q
    |||||||||||||||| ||||||| || |||| || ||| || ||| |||||| ||||||| | ||||||||||||||||||| |||||||||||||    
T  14921948 ttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatgatgtattgtttttccgatttacatgatttctcacgaaaaagactcaaa 14922044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 363
Target Start/End: Original strand, 28278395 - 28278517
Alignment:
Q  242 tgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    ||||||||||| ||||| || | |||| ||| |||| | |||||||||  |||||| ||||||||| |||||||||||||||| || |||||||||||||    
T  28278395 tgatttacatgctttcttaccacaaaacacttaaaatatctatggagttgcatgatctaggataaaagtgaattacaacgactcaagtgaaaataataca 28278494  T
Q  341 aaatgttccacaaaccattgaga 363  Q
      ||||||  |||||||||||||    
T  28278495 ctatgttcttcaaaccattgaga 28278517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 1733316 - 1733143
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||||||||||| ||| ||||||||||  |||||||||| |  |   || ||| ||||| |||||||||||||| |||  |||||||||||||| ||    
T  1733316 ttgtattatcttcaacaacattctaagaactcttgatcttcatttcttc-atccttaatccttcacgtgatgtcttgctttgatgatttacatgattcct 1733218  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    |||||        ||||||||||||  ||| ||||| | |||||||||  ||||||||||||||| ||||||||| |||||||    
T  1733217 cacta--------caaaacacctatatagtttcatgctctaggataaaactgaattacaacgactcaaatgaaaacaatacaa 1733143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 35708028 - 35707826
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||| | ||||| ||||||  |   || |||||| || ||| |||||||||| |||  |||||||||||||| ||    
T  35708028 ttgtattgtcttcaacaaccttctaagaaaccttgatattcaattcttc-atccttgatacttcacatgatgtcttgattttatgatttacatgattcct 35707930  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| |||||||||||||||| ||||     || |||||||||  ||||||||||| | | || |||||| ||||||| ||||| | |||||||    
T  35707929 cactacaaaacactcaaaacacctatgaagtcgtgcaatctaggataaaactgaattacaacaaatcaagtgaaaacaatacaacatgtttctcaaacca 35707830  T
Q  358 ttga 361  Q
    ||||    
T  35707829 ttga 35707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 355
Target Start/End: Original strand, 19949496 - 19949640
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtg 310  Q
    ||||||||| ||| |||||| ||| |||  | || ||||||||| || |||| |||| |||||||||||||||||||| |||| || ||  |||||  |     
T  19949496 cttgatccttcacatgatgttttgatttgataatctacatgattccttactacaaaacactcaaaacacctatggagtttcattatctataataaaacta 19949595  T
Q  311 aattacaacgactaaaatgaaaataatacaaaatgttccacaaac 355  Q
     |||||||||||| || |||||||||||||| ||||||| |||||    
T  19949596 tattacaacgactcaagtgaaaataatacaatatgttcctcaaac 19949640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 305
Target Start/End: Complemental strand, 25474259 - 25474116
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| ||||||| ||| ||||||||||| |||| |||||||  | | || |||||| || ||| |||||||||| |||  |||||||||||||| |||||    
T  25474259 tattgtcttcaacaaccttctaagaacccttgaccttcaattct-acatccttgattcttcacatgatgtcttgatttgatgatttacatgattcctcac 25474161  T
Q  262 ta-aaaagactcaaaacacctatggagtctcatgatttaggataa 305  Q
    || |||| | ||||||||||| ||||||  |||||| ||||||||    
T  25474160 tacaaaacagtcaaaacacctttggagttgcatgatctaggataa 25474116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 35031843 - 35031727
Alignment:
Q  244 atttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    ||||| |||||| || |||| |||| |||||||||||||||||| |  |||||| ||||||||| || | |||||||||||  | |||||| |||||||     
T  35031843 atttatatgattcctgactacaaaacactcaaaacacctatggaattgcatgatctaggataaaagtaagttacaacgactcgagtgaaaacaatacaat 35031744  T
Q  343 atgttccacaaaccatt 359  Q
    ||||||| |||||||||    
T  35031743 atgttcctcaaaccatt 35031727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 21843006 - 21843093
Alignment:
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattg 360  Q
    ||||||||||| ||||  |||||||||||||||| || |||||||| ||||  |||||||| ||||||| |||||||  |||||||||    
T  21843006 aaaacacctatagagttgcatgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcctaaaaccattg 21843093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 343
Target Start/End: Complemental strand, 22511169 - 22510987
Alignment:
Q  161 gtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctca 260  Q
    ||||| |||||||||||  |||| ||| |||||| | ||||| || |||| ||  ||| | ||| |||||||||| |||   ||||||||||||||||||    
T  22511169 gtattgtcttcaaaaaccatctatgaatcattgaacatcaatcttcatatcctcaatctttcacttgatgtcttgatttttcgatttacatgatttctca 22511070  T
Q  261 cta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    ||| |||| | ||||||||| |||  |||  ||  ||||||||||||||| ||||||| |||||  |||||||| |||||||||    
T  22511069 ctacaaaacaatcaaaacac-tatatagttgcacaatttaggataaacgtaaattacagcgactcgaatgaaaaaaatacaaaa 22510987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 32276503 - 32276605
Alignment:
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||||| ||||||||||||| |||||||   ||||||||| |||||| | |||||||| ||||  ||| |||| ||| ||||||||||  ||||||||    
T  32276503 cactaaaaggactcaaaacacccatggagttgaatgatttagaataaacttcaattacaatgactcgaataaaaacaatgcaaaatgttcttcaaaccat 32276602  T
Q  359 tga 361  Q
    |||    
T  32276603 tga 32276605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 16593640 - 16593796
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||||| |||||||||| |  |   ||  |||||||| ||  |||||||||| |||  ||||||||||||||  |    
T  16593640 ttgtattgtcttcaacaaccttctaagaacccttgatcttcatttcttc-atcgttgatccttcaaatgatgtcttgatttgatgatttacatgattctt 16593738  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    ||||| |||| ||||| ||||||||||||||  |||||| |||||||||  |||||||    
T  16593739 cactacaaaacactcagaacacctatggagttgcatgatctaggataaaactgaatta 16593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 19548183 - 19548239
Alignment:
Q  377 gaggaaatgttggatatataatagaggtgattcatatatctaatgttttaaggtttt 433  Q
    ||||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||    
T  19548183 gaggaaatgttggatatataagagaggagacccatatatctaatgtcttaaggtttt 19548239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 17240812 - 17240928
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgacta 324  Q
    ||||||||||||||| |  ||||| ||||||| |||||||||| ||||  |||||||||| |||  |||||||||| |||||  | |||||| ||||||     
T  17240812 gtgatgtcttgttttgccaatttatatgatttttcactaaaaacactc--aacacctatgaagttgcatgatttagaataaaactaaattacgacgactc 17240909  T
Q  325 aaatgaaaataatacaaaa 343  Q
     |||||||| |||| ||||    
T  17240910 gaatgaaaacaatagaaaa 17240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 343
Target Start/End: Original strand, 22388695 - 22388827
Alignment:
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    |||| ||||||||| ||||| ||||| | |||| |  ||||||||||||||||||| |||||||||||||     ||| |||  ||||||| ||||||||    
T  22388695 atattcttgatccttcacgtaatgtcatattttgccaatttacatgatttctcactgaaaagactcaaaa----aatgaagttgcatgattcaggataaa 22388790  T
Q  307 cgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
      || ||||||| |||| ||||||||| |||| ||||    
T  22388791 actggattacaatgactcaaatgaaaacaataaaaaa 22388827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 28413977 - 28413918
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatg 284  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||| || ||||||||||    
T  28413977 gtgatgtcttgattttctgatttacatgatttatcactaaaatgacccagaacacctatg 28413918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 15829292 - 15829157
Alignment:
Q  214 tgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaat 313  Q
    ||||||| |||||||||||||| |||   ||||||||||||||||||||         |||||||| ||||||||  ||||||||||||||||    | |    
T  15829292 tgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactg--------caaaacacatatggagttgcatgatttaggataaa----agt 15829205  T
Q  314 tacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||||| || |||||| |||||||   ||||| |||||||||||    
T  15829204 tacaacgacttaagtgaaaacaatacaatgcgttcctcaaaccattga 15829157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 21504066 - 21504117
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| ||||||||||||||||||||||  ||||| |||||| |||||||    
T  21504066 acatcattataaaataatagaaaaacatactttagagtgaacaataggagga 21504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 23255631 - 23255669
Alignment:
Q  248 acatgatttctcactaaaaagactcaaaacacctatgga 286  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  23255631 acatgatttctcactaaaattactcaaaacacctatgga 23255669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 15453989 - 15454042
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggaggag 61  Q
    |||||||| || |||||||| ||||| ||| | |||||||||||||||||||||    
T  15453989 gacatcattatcaaataatataaaaatataacctagagagaacaagaggaggag 15454042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 18235809 - 18235850
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||||||||||||| |||| |||||    
T  18235809 aaaacaatagaaaaacataccatagagagaataagaagagga 18235850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 29647577 - 29647630
Alignment:
Q  301 gataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    |||||| |||||||||||||||| ||||||||| |||| |||| ||||| ||||    
T  29647577 gataaaagtgaattacaacgactcaaatgaaaacaatataaaaagttcctcaaa 29647630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 32703977 - 32704009
Alignment:
Q  312 attacaacgactaaaatgaaaataatacaaaat 344  Q
    |||||||||||| ||||||||||||||||||||    
T  32703977 attacaacgactcaaatgaaaataatacaaaat 32704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 34077102 - 34077046
Alignment:
Q  220 tccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaa 276  Q
    |||| ||||||||||| ||| |  | ||||||||||||||||||||| |||||||||    
T  34077102 tccatgtgatgtcttggtttgccaaattacatgatttctcactaaaatgactcaaaa 34077046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 100 - 354
Target Start/End: Complemental strand, 26070758 - 26070504
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||| ||| ||| |||||||||||  ||||||||||  ||||||||  |  ||||| ||| ||||||||||| || || ||||||| |||||||    
T  26070758 tttttcgagccttcttccgtcttgaaatgccttggaacttgaactgaattttctctaacttgcattgtcttcaaaaaccttatacgaaccatagatcttc 26070659  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    ||| || |||| ||||||||| || ||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  26070658 aatcttcatatccttgatccttcatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatggagttgcatgattta 26070559  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
     ||||||  |||||||||   |||  |||||||| ||||| |||| |||| ||||    
T  26070558 tgataaaactgaattacattaactcgaatgaaaacaatactaaattttcctcaaa 26070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 7742759 - 7742961
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || |||||||||||||||||||||| | || ||||  | ||| || |||||||||| ||||||||||||||||||||||||||    
T  7742759 ttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgttttgttttactgatttacatgatttct 7742858  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    || |||||| ||||||||||| ||||   |  |||||||||||||||| ||||||||||| ||||  || ||||| ||||||||||||||  ||||||||    
T  7742859 cattaaaaaaactcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaacgaaaacaatacaaaatgttcttcaaaccat 7742958  T
Q  359 tga 361  Q
    |||    
T  7742959 tga 7742961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 100 - 363
Target Start/End: Original strand, 19763716 - 19763984
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||||||| ||||||||  ||| |  |||||||||| |||||||||   |   ||||||||||||||||||| ||||||||||| |||||||||    
T  19763716 tttttcgagcgttcttccatctttcaatcctttggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaacccttgatcttc 19763815  T
Q  200 aatattga-------tatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctca 292  Q
    ||| || |       | | |||||| || ||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||||  ||| |||  ||    
T  19763816 aatcttcaatcttcatttccttgattcttcacttgatgtctcgttttgccgatttacatgatttctcactaaaaagactcaaaacac--atgaagttgca 19763913  T
Q  293 tgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattgaga 363  Q
    ||||||||||||||  |||| ||||  | || ||||||||| ||||||||| |||||||||||| ||||||    
T  19763914 tgatttaggataaaactgaactacattgcctcaaatgaaaacaatacaaaaagttccacaaacccttgaga 19763984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 135 - 361
Target Start/End: Complemental strand, 16634296 - 16634069
Alignment:
Q  135 aacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtctt 234  Q
    ||||||| ||||||||||  |  |||||||| ||||||||||| ||||||||||||||| |||||||  || ||||  ||| |||| |||||||||||||    
T  16634296 aacttgaaatgaatttttttcatcttgtattttcttcaaaaaccttctaagaaccattggtcttcaaacttcatattattgttccttcacgtgatgtctt 16634197  T
Q  235 gttttactgatttacatgatttctcact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaa 333  Q
    | |||   |||||| |||||||||||||  |||| | ||||||||||||| ||||  |||||||||| ||||| ||||||||||||||||  | ||||||    
T  16634196 gatttgtcgatttatatgatttctcactgcaaaacattcaaaacacctatagagttgcatgatttagaataaaagtgaattacaacgactcgagtgaaaa 16634097  T
Q  334 taatacaaaatgttccacaaaccattga 361  Q
     ||||||| ||||| | |||||||||||    
T  16634096 caatacaatatgtttctcaaaccattga 16634069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 161 - 361
Target Start/End: Complemental strand, 20694863 - 20694663
Alignment:
Q  161 gtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctca 260  Q
    ||||| |||||||| || |||||||||||||| ||||||||| || || | | | ||||| ||  |||||||||||||| | |||||||||||||||| |    
T  20694863 gtattgtcttcaaataccttctaagaaccatttatcttcaatcttaatgtccgttatccttcatatgatgtcttgttttgccgatttacatgatttctta 20694764  T
Q  261 ctaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattg 360  Q
    ||||||||||||||||||| |||| |||   || |||| |||||||  |||||||||| ||||  |||||||| ||||||||| ||||| ||||||||||    
T  20694763 ctaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattg 20694664  T
Q  361 a 361  Q
    |    
T  20694663 a 20694663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 24410842 - 24411021
Alignment:
Q  182 taagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacct 281  Q
    ||||||||||||||||| ||| || | || || |||||| || |||||||||| |||| |  ||| |||||||||||||||||||| |||||||||||||    
T  24410842 taagaaccattgatcttgaatcttcagatcctcgatccttcatgtgatgtcttattttgccaattgacatgatttctcactaaaaatactcaaaacacct 24410941  T
Q  282 atggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
        |||  || |||||||||||||  ||||||||||||||| ||||||||| |||||||||| |||| |||||||||||    
T  24410942 cgcaagttgcacgatttaggataaaactgaattacaacgactcaaatgaaaacaatacaaaattttcctcaaaccattga 24411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 167 - 361
Target Start/End: Complemental strand, 24841970 - 24841776
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aa 265  Q
    ||||||||| | |||||||||||||||| |||||||    |||| ||||||||| |||||| ||||||| |||    |||||||||||||||||||| ||    
T  24841970 tcttcaaaatccttctaagaaccattga-cttcaatccacatatccttgatccttcacgtgttgtcttgatttttcaatttacatgatttctcactacaa 24841872  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || ||| ||||||||||||||||  |||||| ||||||||| |||| |||||||||||  | |||||| ||||||| ||||||| |||||||||||    
T  24841871 aacactaaaaacacctatggagttccatgatctaggataaaagtgacttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattga 24841776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 11274218 - 11274408
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| |||||||| || ||||||||||||||| |||||||| || |||| ||||||||| || ||||||||||| |||   ||| |||||||||||    
T  11274218 cttgtattgtcttcaaagaccttctaagaaccattggtcttcaatcttcatatccttgatccttcatgtgatgtcttgatttgtcgatatacatgatttc 11274317  T
Q  258 tcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    | |||| |||| ||||||||||||||||||||  |||||||||||||||| |  | || ||||| || || |||||| ||||||| |||||    
T  11274318 ttactacaaaacactcaaaacacctatggagttgcatgatttaggataaaagcaagttgcaacggctcaagtgaaaacaatacaatatgtt 11274408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 100 - 278
Target Start/End: Original strand, 17695293 - 17695464
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||||||| ||  |||||||||||  ||||||||  |||||||||| ||| ||||||||| ||||||||||| |||||| ||||||||||||||    
T  17695293 tttttcgagcgttcttcggtcttgaaatgccttggaacttaggatgaattttccccaacttgtattgtcttcaaaaaccttctaataaccattgatcttc 17695392  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    | |||| |||  ||||||       ||||| ||||||||| ||  |||||||||||| |||||||||||||||||||||    
T  17695393 attattcataaccttgat-------gtgatttcttgttttgctactttacatgatttttcactaaaaagactcaaaaca 17695464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 100 - 322
Target Start/End: Complemental strand, 18178385 - 18178162
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    ||||| |||||||| ||| |||||||| ||  ||||||||||||||||||||   | | |||||||||||||||| || ||| |||||| |||| |||||    
T  18178385 ttttttgagcgttcttccgtcttgaaa-gccttggaacttgagatgaattttattcaatttgtattatcttcaaagaccttccaagaacaattggtcttc 18178287  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgtttta-ctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctc-atgatt 297  Q
    ||| || |||| || |||||| || | | |||||||||||  |  |||||||||||||||||||||||||||| |||| ||||||| |||  | ||||||    
T  18178286 aatcttcatatcctcgatccttcatgcggtgtcttgttttttccaatttacatgatttctcactaaaaagactaaaaatacctatgaagttgcaatgatt 18178187  T
Q  298 taggataaacgtgaattacaacgac 322  Q
    |||||||||  ||||||||||||||    
T  18178186 taggataaaactgaattacaacgac 18178162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 161 - 341
Target Start/End: Complemental strand, 22230027 - 22229847
Alignment:
Q  161 gtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctca 260  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| |  ||||  |||||||| |||||||||||||| |||  |||||||||||||| ||||    
T  22230027 gtattatcttcaacaaccttctaagaacccttgatcttcaat-tccatatctttgatccttcacgtgatgtcttgatttgttgatttacatgattcctca 22229929  T
Q  261 cta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    ||| |||| || |||||||| | ||||||  |||| | |||||||||  ||||||||||||||| || |||||| |||||||    
T  22229928 ctacaaaatacccaaaacacttgtggagttgcatggtctaggataaaactgaattacaacgactcaagtgaaaacaatacaa 22229847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 363
Target Start/End: Original strand, 25594585 - 25594786
Alignment:
Q  163 attatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcact 262  Q
    ||||||| ||||||| |||||| | |||||||| |||||| || |||| ||||||| | || ||||||||||  |||   ||||||||||||||||||||    
T  25594585 attatctacaaaaaccttctaatatccattgatattcaatcttcatatccttgatcgttcatgtgatgtcttaatttttcgatttacatgatttctcact 25594684  T
Q  263 a-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    | |||| ||||||||||| |||| |||  ||| ||||||||||||  |||| |||||| |||  | |||||| ||||||| ||||||| |||||||||||    
T  25594685 ataaaacactcaaaacacatatgaagttgcatcatttaggataaaaatgaaatacaacaactccagtgaaaacaatacaatatgttcctcaaaccattga 25594784  T
Q  362 ga 363  Q
    ||    
T  25594785 ga 25594786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 17027752 - 17027550
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||| |||| | ||||||| || ||||  |||||| | |||||||||||||| |||   ||||||||||||||||    
T  17027752 ttgtattgtcttcaagaaccttctaagaagcattaa-cttcaatcttcatatctttgatcttgcacgtgatgtcttgatttttcgatttacatgatttct 17027654  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||    |||| | ||||||||||||||||||  | |||||||||||||| |||||||||||||||| || |||||| ||| ||| ||||||| ||||||     
T  17027653 catggcaaaacagtcaaaacacctatggagttgcgtgatttaggataaaagtgaattacaacgactcaagtgaaaacaattcaatatgttcctcaaaccc 17027554  T
Q  358 ttga 361  Q
    ||||    
T  17027553 ttga 17027550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 160 - 361
Target Start/End: Complemental strand, 20083691 - 20083488
Alignment:
Q  160 tgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctc 259  Q
    |||||| | |||||| ||||| ||| ||||||||| ||||| | || |||| ||| ||| | |||||||||| ||||||| | ||||||||| |||| ||    
T  20083691 tgtattgttttcaaatactttataaaaaccattgaacttcatttttcatatccttaatctttcacgtgatgttttgttttgccgatttacataatttttc 20083592  T
Q  260 actaaaaa--gactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||||||  ||||||||||||||||||| |  |||||||||||||| |  ||||||||||  |||  ||| |||| |||| |||||||||| ||||| |    
T  20083591 actaaaaaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattacaaatactcgaataaaaacaataaaaaatgttcctcaaacta 20083492  T
Q  358 ttga 361  Q
    ||||    
T  20083491 ttga 20083488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 361
Target Start/End: Complemental strand, 24517597 - 24517377
Alignment:
Q  133 ggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtc 232  Q
    ||||||||| |||||||||   ||  || ||||||||| |||||| || | | |||||||| ||| |||| ||  ||| ||||||||| ||||||||||     
T  24517597 ggaacttgaaatgaattttcttcgctttctattatcttaaaaaaccttatgataaccattggtctgcaatctttgtatccttgatccttcacgtgatgta 24517498  T
Q  233 ttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaa 332  Q
    ||| ||||| |||||||||||||||| | ||        |||||||||||||||||  ||||||| |||||||| ||||||||||||||||    |||||    
T  24517497 ttgatttaccgatttacatgatttcttatta--------caaaacacctatggagttacatgattaaggataaatgtgaattacaacgactcgggtgaaa 24517406  T
Q  333 ataatacaaaatgttccacaaaccattga 361  Q
    | ||||||| ||||||| |||||||||||    
T  24517405 acaatacaatatgttcctcaaaccattga 24517377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 11997757 - 11997931
Alignment:
Q  134 gaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatat-acttgatcctccacgtgatgtc 232  Q
    ||||||| ||||||||||| || |||||||||||||| |||||| |||||| || |||||||||||| | || ||||  |||||||||  |   ||||||    
T  11997757 gaacttgggatgaattttttccaacttgtattatctttaaaaaccttctaaaaatcattgatcttcattcttcatatctcttgatccttaataagatgtc 11997856  T
Q  233 ttgttttactgatttacatgatttctcact-aaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||| | | | |||||||||| ||||||||| ||||| |||||||||||||||| |||  |||||||||| |||||    
T  11997857 ttgctctgccgatttacatgttttctcactaaaaaaaactcaaaacacctatgaagttgcatgatttagtataaa 11997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 358
Target Start/End: Original strand, 15697293 - 15697425
Alignment:
Q  226 tgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaa 325  Q
    |||||||||||||||| ||||||  |||||||| | ||||||||||||||| |||||| |||   |||||||| |||||||  |||||| ||||| || |    
T  15697293 tgatgtcttgttttacggatttatctgatttcttaataaaaagactcaaaatacctatagagatgcatgatttcggataaaactgaattgcaacgtctca 15697392  T
Q  326 aatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||||| ||||||||| ||||| | ||||||    
T  15697393 aatgaaaacaatacaaaaagttcctctaaccat 15697425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 25367735 - 25367655
Alignment:
Q  243 gatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||  |||||| ||||||||    
T  25367735 gatttacatgatttctcactaaaaagactcaaaacacctatgaagttgcatgatttatgataaaactgaatttcaacgact 25367655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 25943875 - 25943702
Alignment:
Q  101 ttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttca 200  Q
    ||||||||||||| ||| ||||||||| || || ||||| |||||||||||| |  |||||||||   |  |||||  ||||||||||||||||| || |    
T  25943875 ttttcgagcgttcttccgtcttgaaatacattgaaactttagatgaatttttactaacttgtattgattcaaaaaaaattctaagaaccattgatattta 25943776  T
Q  201 atattga-tatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaa 274  Q
    || || | |||  |||||| |||||||||||| || ||||  ||||||||||||||||| |||||||||||||||    
T  25943775 atcttcaatatctttgatcttccacgtgatgtattattttg-tgatttacatgatttcttactaaaaagactcaa 25943702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 319
Target Start/End: Original strand, 26329959 - 26330117
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||| |||||| ||||||| |||||||| ||||||| || |||| ||||||||| || ||||||||||| |||    ||||||||||||||     
T  26329959 ttgtattgtcttaaaaaaccttctaaggaccattga-cttcaatcttcatatccttgatccttcatgtgatgtcttgatttttcaatttacatgatttc- 26330056  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaac 319  Q
     |||| |||| |||||||||||||||| |||  |||||| ||||||||| | ||||||||||    
T  26330057 -actacaaaacactcaaaacacctatgaagttgcatgatctaggataaaagggaattacaac 26330117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 179 - 361
Target Start/End: Complemental strand, 19331715 - 19331534
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgtttt-actgatttacatgatttctcactaaaaagactcaaaac 277  Q
    |||||| || ||||||  |||||| || |||| || |||||| ||| |||||  ||||||| |  ||||||||||||||||||| |||||||||||||||    
T  19331715 ttctaaaaatcattgaatttcaatcttcatatcctcgatccttcacttgatgctttgtttttaacgatttacatgatttctcacaaaaaagactcaaaac 19331616  T
Q  278 acctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||  ||||| |  ||||||||||||||||  | |||||||||||||  |||||| | ||||||||| ||| | ||||| |||||    
T  19331615 ac--atggaattgcatgatttaggataaaactaaattacaacgactcgaatgaacacaatacaaaaagtttctcaaacaattga 19331534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 361
Target Start/End: Complemental strand, 18222671 - 18222516
Alignment:
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataa 305  Q
    |||| ||||||| | |||||| || |||| |||  |||||||||| ||| || |||| |||| |||||||||||||||||| |  |||||||||||||||    
T  18222671 atatccttgatctttcacgtgttgccttgatttgttgatttacataattacttactataaaacactcaaaacacctatggatttgcatgatttaggataa 18222572  T
Q  306 acgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    | ||||||||||| ||||  | | |||| ||||||| ||||| | |||||||||||    
T  18222571 aagtgaattacaatgactcgagttaaaacaatacaatatgtttctcaaaccattga 18222516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 361
Target Start/End: Original strand, 16622541 - 16622759
Alignment:
Q  134 gaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtct 233  Q
    |||||||| |||||||||   | | ||||||| ||||||||| ||| |||||||||| || |||||||| || |||| ||| ||||| || |||||||||    
T  16622541 gaacttgaaatgaattttcttcaatttgtattgtcttcaaaacctt-ctaagaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtct 16622639  T
Q  234 tgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaa 333  Q
    || |||    |||||||||||||||||||         ||||||||||||| |||  |||||| ||||||||| ||| |||||||| | || | |||| |    
T  16622640 tgatttgtcaatttacatgatttctcact--------gcaaaacacctatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaata 16622731  T
Q  334 taatacaaaatgttccacaaaccattga 361  Q
     ||||||| ||||||| |||||||||||    
T  16622732 caatacaacatgttcctcaaaccattga 16622759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 333
Target Start/End: Complemental strand, 30790944 - 30790827
Alignment:
Q  216 atcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    ||||| ||| ||||||||||| || | ||||||||| |||| ||||||||||||||||||||||| ||| |||   || ||||||||||||  |||||||    
T  30790944 atccttcacatgatgtcttgtgttgccgatttacataatttttcactaaaaagactcaaaacaccaatgaagttggataatttaggataaaactgaatta 30790845  T
Q  316 caacgactaaaatgaaaa 333  Q
     ||||||| |||| ||||    
T  30790844 taacgactcaaataaaaa 30790827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 361
Target Start/End: Original strand, 17381954 - 17382127
Alignment:
Q  180 tctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacac 279  Q
    |||||||||||||| |||||||  || |||| ||||||||| ||| | |||||||| |||   |||||||||||||||||||||        ||||||||    
T  17381954 tctaagaaccattggtcttcaaacttcatatccttgatccttcacattatgtcttgatttgacgatttacatgatttctcacta--------caaaacac 17382045  T
Q  280 ctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
      ||  |||  |||||||||||||||| ||||| |||||||| |  | |||||| ||||||| ||||||| |||||||||||    
T  17382046 tcataaagttgcatgatttaggataaaagtgaaatacaacgatttgagtgaaaacaatacaatatgttcctcaaaccattga 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 23157792 - 23157880
Alignment:
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||||||| | |  ||||||||| |||||| |||||||||||||||| ||||||||| ||||| ||| ||||| |||||||||||    
T  23157792 aaaacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaaccattga 23157880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 12339904 - 12340106
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||  || ||||||||||| ||||| ||||||  |   || ||||||||| |||||||||||||| |||  ||||||| |||||| ||    
T  12339904 ttgtattgtcttcaacgaccttctaagaacccttgattttcaattcttc-atccttgatccttcacgtgatgtcttgatttgttgatttatatgattcct 12340002  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
     |||| |||| || ||||| || |||| |||  |||||| ||| |||||  |||||||||| |||  || ||||||||||| || ||||||| |||||||    
T  12340003 tactacaaaacacgcaaaatacatatgaagttgcatgatctagtataaaactgaattacaatgacacaagtgaaaataatataatatgttcctcaaacca 12340102  T
Q  358 ttga 361  Q
    ||||    
T  12340103 ttga 12340106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 24130932 - 24130817
Alignment:
Q  81 aattttgcatttttcgtct-tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    ||||||||||||||||||  |||||| ||||||| |   |||||||||||  ||||||||| |||||||||| ||| | ||||||| | ||||||||| |    
T  24130932 aattttgcatttttcgtccctttttctagcgttctttgctcttgaaatgccctggaacttgggatgaattttccccaatttgtattgtattcaaaaacct 24130833  T
Q  180 tctaagaaccattgat 195  Q
    ||||||| ||||||||    
T  24130832 tctaagatccattgat 24130817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 25680708 - 25680619
Alignment:
Q  272 caaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||| |||  |||||||||| |||||  |||||||||||||||  | |||||| ||||||| ||||||| |||||||||||    
T  25680708 caaaacacctatgaagttgcatgatttagaataaaattgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattga 25680619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 29150882 - 29150986
Alignment:
Q  245 tttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaat 344  Q
    |||||| |||||||||||||||| ||||||||||| |||| | |  ||||||||| ||||||  |||||||||| || | || |||||||||||||| ||    
T  29150882 tttacaagatttctcactaaaaa-actcaaaacacttatgaaattgcatgatttaagataaaaatgaattacaatgattcaagtgaaaataatacaagat 29150980  T
Q  345 gttcca 350  Q
    ||||||    
T  29150981 gttcca 29150986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 357
Target Start/End: Complemental strand, 15205786 - 15205670
Alignment:
Q  242 tgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    |||||||||| ||| ||||||  |||| |||||||||||||||||| |  |||||| ||||| |||  |||||||||||||||  | |||||| ||||||    
T  15205786 tgatttacattattcctcactgcaaaacactcaaaacacctatggaattgcatgatctaggagaaaactgaattacaacgactcgagtgaaaacaataca 15205687  T
Q  341 aaatgttccacaaacca 357  Q
    | ||||||| |||||||    
T  15205686 atatgttcctcaaacca 15205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 25075254 - 25075329
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatgga 286  Q
    ||||||||| ||| |||||||||| |||  ||||||||||||||||| |||| |||| ||||||||||||||||||    
T  25075254 cttgatccttcacatgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatgga 25075329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 25133223 - 25133298
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatgga 286  Q
    ||||||||| ||| |||||||||| |||  ||||||||||||||||| |||| |||| ||||||||||||||||||    
T  25133223 cttgatccttcacatgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatgga 25133298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 30072341 - 30072218
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||| |||||| || ||||||||||| ||||||||| || ||||  |||||||| || ||||||||||| |||   |||| | ||||||||     
T  30072341 ttgtattgtctttaaaaaccttttaagaaccattaatcttcaatcttcatatctttgatccttcatgtgatgtcttgatttgtcgattaatatgatttcc 30072242  T
Q  259 cactaaaaag-actcaaaacacct 281  Q
    ||||| |||| |||||||||||||    
T  30072241 cactacaaagcactcaaaacacct 30072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 22643794 - 22643920
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| | |||||| || || ||||||||| |||| || ||| || |||  || |||||||||| || ||||||||||| | ||| | ||||||||||    
T  22643794 ttgtattgtattcaaataccttttaagaaccactgatatttaatctttataccctcgatcctccacttggtgtcttgttttgccgatatgcatgatttct 22643893  T
Q  259 cactaaaaagactcaaaacacctatgg 285  Q
    |||||| ||||| ||| ||||||||||    
T  22643894 cactaacaagacacaagacacctatgg 22643920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 22755112 - 22754963
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaat--attgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac-ta 263  Q
    ||||||| ||| || |||||||| ||||||||||||  ||| || |  ||||||||  |||| |||||||| |||  |||||||||||||||||||| |     
T  22755112 tcttcaacaaccttataagaacccttgatcttcaattcattaatct--ttgatcctgtacgttatgtcttgatttgatgatttacatgatttctcacttc 22755015  T
Q  264 aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    |||| |||||||||||||||| |||  ||| || |||||||||  |||||||    
T  22755014 aaaacactcaaaacacctatgaagttgcataatctaggataaaactgaatta 22754963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 24279581 - 24279638
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||    
T  24279581 gtgatgtcttgttttgtcgatttatatgatttctcactaaaatgactcaaaacaccta 24279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 24382633 - 24382576
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||    
T  24382633 gtgatgtcttgttttgtcgatttatatgatttctcactaaaatgactcaaaacaccta 24382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 16603590 - 16603667
Alignment:
Q  247 tacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
    ||||||||||||||||| |||| |||||||||||||||| | |  ||||||||||| ||||  | |||||||||||||    
T  16603590 tacatgatttctcactagaaaacactcaaaacacctatgaaattgcatgatttaggctaaaatttaattacaacgact 16603667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 359
Target Start/End: Original strand, 22967845 - 22967932
Alignment:
Q  272 caaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccatt 359  Q
    ||||||||||||| ||| |||| ||||| |||| | ||||||||||  ||||  |||||||| | ||||| ||||||| |||||||||    
T  22967845 caaaacacctatgaagtttcattatttatgatacaagtgaattacattgacttgaatgaaaacagtacaatatgttcctcaaaccatt 22967932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 25594141 - 25594192
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| | |||| |||||||||||||| | ||||||||||||||||||||    
T  25594141 acatcataacaaaacaatagaaaaacatatcttagagagaacaagaggagga 25594192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 433
Target Start/End: Original strand, 8215124 - 8215152
Alignment:
Q  405 gattcatatatctaatgttttaaggtttt 433  Q
    |||||||||||||||||||||||||||||    
T  8215124 gattcatatatctaatgttttaaggtttt 8215152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 18452701 - 18452777
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttg 235  Q
    ||||||| | || |||||| || ||||||||||||||||||||| || ||||  |||||||  || |||||||||||    
T  18452701 ttgtattgttttaaaaaaccttataagaaccattgatcttcaattttcatatctttgatccctcatgtgatgtcttg 18452777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 100 - 361
Target Start/End: Complemental strand, 16439742 - 16439482
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||||||||||||| ||| |||| |||||   |||| |||| |||||||||| ||  ||||||||| ||||||||| | |||||||||||||||||||||    
T  16439742 tttttcgagcgttcttccgtcttaaaatgtcttggatcttgcgatgaattttcccgaacttgtattttcttcaaaaccattctaagaaccattgatcttc 16439643  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    | | || |||| | ||||| | ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | || |||  ||| |||||    
T  16439642 attcttcatatccctgatctttcatctgatgtcttgtttttctgatttacatgatttctcactaaaaagactcaaaacacatgtgaagttgcattattta 16439543  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||| || ||||| |||||||  ||| |||| |||||||| ||| || ||||| |||||    
T  16439542 ggataaaagttaattataacgact-caataaaaacaatacaaattgtccctcaaactattga 16439482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 81 - 333
Target Start/End: Original strand, 26499658 - 26499910
Alignment:
Q  81 aattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgactt-gtattatcttcaaaaactt 179  Q
    ||||||||| |||||||  |||||||||||||  ||| ||||| |||||  || ||||||| ||||||||| |   |||| ||||| ||||||||||| |    
T  26499658 aattttgcagttttcgttctttttcgagcgttgttccgtcttgcaatgccttgaaacttgaaatgaatttt-ctttactttgtattgtcttcaaaaacct 26499756  T
Q  180 tctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacac 279  Q
    ||||||||||||||||||||||| || |||| || |||| | |||||| | ||||||||| | ||||| ||||||||||||||||||| ||||| |||||    
T  26499757 tctaagaaccattgatcttcaatcttcatatcctcgatctttcacgtggtatcttgttttgccgatttgcatgatttctcactaaaaacactcataacac 26499856  T
Q  280 ctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaa 333  Q
    ||||| | |  ||||||||||||||||   ||||||||||||||  ||||||||    
T  26499857 ctatgaaattacatgatttaggataaaatcgaattacaacgacttgaatgaaaa 26499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 119 - 319
Target Start/End: Original strand, 9942999 - 9943199
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatc 218  Q
    ||||||||||   |||||||||||||||||||| ||| ||||  ||| |||| |||||| || ||||| |||||||| |||| | || |||| |||| ||    
T  9942999 tcttgaaatgtcttggaacttgagatgaattttccccaacttacattgtctttaaaaaccttataagagccattgattttcattcttcatatccttggtc 9943098  T
Q  219 ctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    ||  |  | |||||||||||| | |||||||||||||||||| |||||| ||| ||||||||||||||||  |||||||||||||||| |||||||||||    
T  9943099 cttgatttaatgtcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattacaa 9943198  T
Q  319 c 319  Q
    |    
T  9943199 c 9943199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 17860338 - 17860540
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||| ||||||| |||||||||||||||  ||||||| ||  ||||||| ||||| ||||||||||| || |||  ||| |||||||||||||    
T  17860338 ttgtattgtctacaaaaaccttctaagaaccattgtccttcaat-ttcttatactttatccttcacgtgatgtcctgatttgttgaattacatgatttct 17860436  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| ||||||| ||| ||||||||  ||||||||| |||||| || ||| |||| ||||  | |||||||||||||||||||||| |||||||    
T  17860437 cactacaaaacactcaaagcacgtatggagttgcatgatttaagataaaagtaaatgacaatgactcgagtgaaaataatacaaaatgttcctcaaacca 17860536  T
Q  358 ttga 361  Q
    ||||    
T  17860537 ttga 17860540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 100 - 361
Target Start/End: Original strand, 26512609 - 26512869
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||| ||||||||  ||| |||||||||||  || ||||||||||||||||||  |  |||||||| | |||| | || || ||||||||||||||||||    
T  26512609 ttttccgagcgtttttccttcttgaaatgccttgaaacttgagatgaatttttatcatcttgtattgtgttcacagaccttttaagaaccattgatcttc 26512708  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    |   || |||| |||||| || ||| || | |||||||| |  | |||||||||||||||||||  ||||||||||||| |||| | ||  |||||| ||    
T  26512709 atccttcatatccttgattcttcacatgttttcttgtttcatcg-tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatcta 26512807  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || |||| |||||||||||||| |  |||||||| ||||||||||||| |||||||||||||    
T  26512808 ggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgttacacaaaccattga 26512869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 100 - 361
Target Start/End: Original strand, 26517725 - 26517985
Alignment:
Q  100 tttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttc 199  Q
    |||| ||||||||  ||| |||||||||||  || ||||||||||||||||||  |  |||||||| | |||| | || || ||||||||||||||||||    
T  26517725 ttttccgagcgtttttccttcttgaaatgccttgaaacttgagatgaatttttatcatcttgtattgtgttcacagaccttttaagaaccattgatcttc 26517824  T
Q  200 aatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgattta 299  Q
    |   || |||| |||||| || ||| || | |||||||| |  | |||||||||||||||||||  ||||||||||||| |||| | ||  |||||| ||    
T  26517825 atccttcatatccttgattcttcacatgttttcttgtttcatcg-tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatcta 26517923  T
Q  300 ggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    || |||| |||||||||||||| |  |||||||| ||||||||||||| |||||||||||||    
T  26517924 ggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgttacacaaaccattga 26517985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 183 - 349
Target Start/End: Original strand, 12972298 - 12972464
Alignment:
Q  183 aagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||||||||||||||||| || ||||  | |||| | ||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  12972298 aagaaccattgatcttcaatcttcatatcatcgatctttcacgttatgtcttggttttctgatttacatgatttctccctaaaaagactcaaaacacgta 12972397  T
Q  283 tggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    || |||  |||||||||||||| |  |||||||||||| ||  |||||||  |||||||||| ||||    
T  12972398 tgaagttgcatgatttaggatacaactgaattacaacgtcttgaatgaaagcaatacaaaattttcc 12972464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 9396496 - 9396652
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||||| |||||||||| | |||||||||| | ||  | | ||||||||| |||||||||||||||||| | |||||| |||||||||    
T  9396496 ttgtattgtcttcaaaaaatttctaagaatcgttgatcttcattcttcttgtccttgatccttcacgtgatgtcttgttttgccgattta-atgatttct 9396594  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattac 316  Q
    ||||||||||||||||||||| |||| |||  |||||||||| |||||  ||||||||    
T  9396595 cactaaaaagactcaaaacacatatgaagttgcatgatttagaataaagatgaattac 9396652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 212 - 361
Target Start/End: Original strand, 32930415 - 32930564
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    |||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||  | |  |||| || |||||||| ||||    
T  32930415 cttgatcctccatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacatctatcaaattgcatgtttaaggataaaagtga 32930514  T
Q  312 attacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||| |||||||   ||| ||| || |||||||||||| |||||||||||    
T  32930515 attaaaacgactcttatggaaacaaaacaaaatgttccgcaaaccattga 32930564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 24617688 - 24617572
Alignment:
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    |||| ||||| ||| ||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||  ||| |||  ||||||||||||||||    
T  24617688 atatccttgacccttcacatgatgtcttgttttgctgatttacataatttctcactaaaaagactcaaaacactcatgaagttacatgatttaggataaa 24617589  T
Q  307 cgtgaattacaacgact 323  Q
      |||||||| ||||||    
T  24617588 actgaattacgacgact 24617572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 361
Target Start/End: Original strand, 14924306 - 14924509
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| ||||||||||| ||| | |||||||||||||||||| || ||||   || | || ||  |||||||||||||  ||| |||||||||||||    
T  14924306 cttgtattgtcttcaaaaacattccatgaaccattgatcttcaattttcatatctctggttcttcatttgatgtcttgtttagctggtttacatgatttc 14924405  T
Q  258 tcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||||||||||||| |||||  | |  |||||||||| ||||| ||||  ||||||||||  |||||| |  ||| ||| |||||| |||||||    
T  14924406 tcacttaaaagactcaaaacccctatataattgcatgatttagaataaaagtgaggtacaacgactcgaatgaataagatataaattgttcctcaaacca 14924505  T
Q  358 ttga 361  Q
    ||||    
T  14924506 ttga 14924509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 266
Target Start/End: Original strand, 33638394 - 33638501
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    |||||||||||||||| || || ||||||||||||||||||||| || |||| ||||||||| ||| |||| | ||||||| | ||||||||||||||||    
T  33638394 ttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatccttgatccttcacttgatatattgttttgccgatttacatgatttct 33638493  T
Q  259 cactaaaa 266  Q
    ||||||||    
T  33638494 cactaaaa 33638501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 15178165 - 15178102
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    ||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  15178165 gtgatgtcttgatttactgattcacatgatttctcactaaaattactcaaaacacctatggagt 15178102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 300
Target Start/End: Original strand, 24507332 - 24507473
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||| |||  |||||| |||||||| |||||||| || ||||  |  ||||| |||||||||||||| |||  ||||||||| |||||||    
T  24507332 ttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgatgtcttgatttgttgatttacaggatttct 24507430  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttag 300  Q
    ||||| ||||  |||||||||||||||||||  ||||||||||    
T  24507431 cactacaaaactctcaaaacacctatggagttgcatgatttag 24507473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 355
Target Start/End: Complemental strand, 15575149 - 15574953
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||  || ||||||||||| ||||||||||||  |   ||  |||||||| |||||||||||||| |||  | |||||||||||| ||    
T  15575149 ttgtattgtcttcaacgaccttctaagaacccttgatcttcaattcttc-atcgttgatccttcacgtgatgtcttgatttgttaatttacatgattcct 15575051  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaac 355  Q
    | ||| |||| ||| |||| |||||||||||  |||||| |||| ||||  | |||||||||||||| | |||||| |||| || ||||||| |||||    
T  15575050 cgctacaaaacacttaaaaaacctatggagttgcatgatctaggctaaaactaaattacaacgactagagtgaaaacaatataacatgttcctcaaac 15574953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 263 - 358
Target Start/End: Original strand, 1755555 - 1755650
Alignment:
Q  263 aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    ||||||||||||||||| |||| |||  |||||||  ||||| | |||||||||||||| | ||||||||| ||||||||||| ||| ||||||||    
T  1755555 aaaaagactcaaaacacgtatgtagttacatgattagggatacaagtgaattacaacgaatcaaatgaaaacaatacaaaatgatcctcaaaccat 1755650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 357
Target Start/End: Original strand, 14768224 - 14768356
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgacta 324  Q
    ||||||||||||||| | ||||||||||||||||  || |||||||||||||||  |||| | |  |||| ||||| ||||| |||||||||||  |||     
T  14768224 gtgatgtcttgttttgccgatttacatgatttctatctgaaaagactcaaaacatttatgaaattgcatgttttagaataaatgtgaattacaataactc 14768323  T
Q  325 aaatgaaaataatacaaaatgttccacaaacca 357  Q
     |||||||  |||||||||  |||| |||||||    
T  14768324 gaatgaaaccaatacaaaaaattcctcaaacca 14768356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 20495790 - 20495885
Alignment:
Q  265 aaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||||| |||| |||  ||| ||||| ||||||  ||||||||||||||| |||| |||| ||| ||||||||||| |||||||||||    
T  20495790 aaagactcaaaacacttatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaaccattga 20495885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 15165851 - 15165788
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    ||||||||||| ||||| |||| |||||||||||||||||||  ||||||||||| ||||||||    
T  15165851 gtgatgtcttgatttaccgattcacatgatttctcactaaaattactcaaaacacgtatggagt 15165788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 30235860 - 30235907
Alignment:
Q  13 catcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  30235860 catcataaaacaatagaaaaacataccctagagagaacaagaggagga 30235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 16174840 - 16174890
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagg 59  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||| ||||    
T  16174840 acatcattataaaataatagaaaaatataccgtagagagaacaagaagagg 16174890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 22559116 - 22559241
Alignment:
Q  172 aaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagact 271  Q
    |||||| |||||| ||||||||| |||   |||| |||| ||||||| | || || | | ||||||||   |||||||||||||||||||| |||||||     
T  22559116 aaaaaccttctaacaaccattgaacttttttattcatatccttgatcattcatgttaggccttgttttttcgatttacatgatttctcact-aaaagacc 22559214  T
Q  272 caaaacacctatggagtctcatgattt 298  Q
    ||||||||||||| |||  ||||||||    
T  22559215 caaaacacctatgaagttgcatgattt 22559241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 361
Target Start/End: Complemental strand, 30355539 - 30355349
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| ||||||||||| |||||||||| ||||||||||||| || |||| || |||||| || |||| |||||| |||   ||||||| ||| | || ||    
T  30355539 tattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcatatcctcgatccttcatgtgaggtcttggtttgtcgatttacgtgaatccttac 30355440  T
Q  262 taaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||        ||||||||||||  |||  ||||||||| |||||| |||||||| |||||||  | |||||| ||||||| |||||   |||||||||||    
T  30355439 ta--------caaaacacctataaagttgcatgatttatgataaaagtgaattaaaacgacttgagtgaaaa-aatacaatatgtttatcaaaccattga 30355349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 16528279 - 16528227
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||| |||| ||||||||||| ||||||||||||||||||||    
T  16528279 gacatcataacaaaacaatacaaaaacataccctagagagaacaagaggagga 16528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 358
Target Start/End: Complemental strand, 15998684 - 15998537
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtg 310  Q
    ||||||| | ||| |||||||||| |||  | |||||||||||| ||||||| |||| |||||||||||||||| |||  |||||| || || |||  |     
T  15998684 cttgatcattcacatgatgtcttgatttggtcatttacatgattcctcactacaaaacactcaaaacacctatgaagttgcatgatatatgagaaaactt 15998585  T
Q  311 aattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||| |||||| | ||  ||||| ||||||| || |||| ||||||||    
T  15998584 aatttcaacgaatcaagggaaaagaatacaatattttcctcaaaccat 15998537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 359
Target Start/End: Original strand, 17198737 - 17198845
Alignment:
Q  244 atttacatgatttctcactaaaaagactc-aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    ||||||| ||||||||||||||||||||| ||||||||||| ||||  |||        |||||  ||||||||||| ||| | ||||||| ||||||||    
T  17198737 atttacaagatttctcactaaaaagactcaaaaacacctatagagttgcat--------ataaaactgaattacaacaactcagatgaaaacaatacaaa 17198828  T
Q  343 atgttccacaaaccatt 359  Q
    | ||||| |||||||||    
T  17198829 aagttcctcaaaccatt 17198845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 33638311 - 33638268
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaat 202  Q
    |||||||||||||||| || || |||||||||||||||||||||    
T  33638311 ttgtattatcttcaaagaccttataagaaccattgatcttcaat 33638268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 15092102 - 15092160
Alignment:
Q  381 aaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttaggtaa 439  Q
    ||||||||||||||||  ||||| ||| |||||| || ||| |||||||||||||||||    
T  15092102 aaatgttggatatatacgagaggggatccatatacctgatgctttaaggttttaggtaa 15092160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 26518507 - 26518608
Alignment:
Q  244 atttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    ||||||||||||||| | ||| |||| |||||| ||||||  |||  ||||||    |||||| ||||||||||||||||  ||||||||  ||||||||    
T  26518507 atttacatgatttcttattaagaagattcaaaatacctatcaagttgcatgatccttgataaaggtgaattacaacgactcgaatgaaaactatacaaaa 26518606  T
Q  344 tg 345  Q
    ||    
T  26518607 tg 26518608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 32930295 - 32930375
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttca 200  Q
    |||||||||||  ||||||||| ||| || ||||||| ||||||||| |||| |||||| ||| ||||| ||||||| ||||    
T  32930295 tcttgaaatgccttggaacttgtgattaa-ttttcccaacttgtattgtctttaaaaaccttccaagaatcattgattttca 32930375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 9396082 - 9396138
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggaggaggag 64  Q
    |||||||| |||||| ||| |||||||||| | |  |||||||||||||||||||||    
T  9396082 gacatcattataaaacaattgaaaaacatatcctgaagagaacaagaggaggaggag 9396138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 12971867 - 12971895
Alignment:
Q  32 aacataccatagagagaacaagaggagga 60  Q
    |||||||||||||||||||||||||||||    
T  12971867 aacataccatagagagaacaagaggagga 12971895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 26499357 - 26499393
Alignment:
Q  24 aatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  26499357 aatataaaaacataccttagagagaacaagaggagga 26499393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 90 - 349
Target Start/End: Original strand, 23908091 - 23908350
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    ||||||||| |||||| ||||||| ||| | ||||||| |  ||||| |||  ||||||||| ||| | ||||||| |||||||||||||||||| ||||    
T  23908091 tttttcgtcatttttcaagcgttcttcctttttgaaattccttggaatttggaatgaattttccccaatttgtattgtcttcaaaaactttctaaaaacc 23908190  T
Q  190 attgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtc 289  Q
    ||||||||| ||| || |||| ||||||||| || | ||||||||| ||| | | ||||||||||||||| ||| ||||||||||| |||||||| | |     
T  23908191 attgatcttaaatcttcatattcttgatccttcatgagatgtcttgctttgccgctttacatgatttctccctagaaagactcaaagcacctatgaaatt 23908290  T
Q  290 tcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
     ||| |||| ||||||| | |||||||||||| |  |||||||| |||||||||||||||    
T  23908291 gcattattttggataaaagggaattacaacgaatcgaatgaaaacaatacaaaatgttcc 23908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 183 - 361
Target Start/End: Original strand, 26387758 - 26387936
Alignment:
Q  183 aagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacaccta 282  Q
    |||||||||| |||||||||||| ||||  |||||||| ||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||| |||    
T  26387758 aagaaccattaatcttcaatattcatatctttgatccttcacttgatgtcttgtttagctgatttacatgatttctcattaaaaagactcaaaacatcta 26387857  T
Q  283 tggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||  ||||||||||||||||  | |||||| |||||  ||||||||| ||||||||| ||| | |||||||||||    
T  26387858 tggagttgcatgatttaggataaaacttaattactacgacacaaatgaaaagaatacaaaacgtttctcaaaccattga 26387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 157 - 361
Target Start/End: Original strand, 21829020 - 21829224
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    |||| |||| |||||||| || ||| | |||||||||||||||||| || |||| |||||| || || ||||||||||||||    |||||||| |||||    
T  21829020 acttatattgtcttcaaagaccttcgatgaaccattgatcttcaatcttcatatccttgatacttcatgtgatgtcttgtttcgacgatttacaagattt 21829119  T
Q  257 ctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacc 356  Q
    |||||||| ||||| |||||| | |||| |||   |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  21829120 ctcactaacaagacccaaaactcatatgaagttgtatgatttaggataaaactgaattacaacgactcaaatgaaaataatacaaaatgttcctcaaacc 21829219  T
Q  357 attga 361  Q
    |||||    
T  21829220 attga 21829224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 11475072 - 11474869
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| |  |||||||||||||| ||||| |||  | ||||  | |||||| || ||||||||||||||| | ||||||||||||||||    
T  11475072 ttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtcttgttttgccgatttacatgatttct 11474973  T
Q  259 cactaaaaa-gactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||||||| |||||||||||| |||| |||  ||||||||||||||||  ||||||||||||| |  |||||||||||||||||| ||||| |||||||    
T  11474972 cactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaaattgaattacaacgagtcgaatgaaaataatacaaaaagttcctcaaacca 11474873  T
Q  358 ttga 361  Q
    ||||    
T  11474872 ttga 11474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 19219100 - 19219303
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| || |||| ||||||||| || ||||||||||| |||   ||||||||||||| ||    
T  19219100 ttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgtgatgtcttggtttgaagatttacatgattcct 19219199  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| ||||||||||  ||||| ||  |||||||| ||||||| ||||||||||||||||  | ||||| ||||| || ||| ||| |||||||    
T  19219200 cactacaaaacactcaaaacatttatggtgttgcatgattttggataaaagtgaattacaacgactctagtgaaagtaataaaatatgctcctcaaacca 19219299  T
Q  358 ttga 361  Q
    ||||    
T  19219300 ttga 19219303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 177 - 361
Target Start/End: Original strand, 8402459 - 8402642
Alignment:
Q  177 ctttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaa 276  Q
    ||||| ||||||||| | |||||||| || |||| || |||||| ||| |||||||||| | ||  |||||||| |||| ||| |||||| |||||||||    
T  8402459 ctttcgaagaaccatagttcttcaatcttcatatcctcgatccttcacttgatgtcttgatctatcgatttacacgattcctcgctaaaa-gactcaaaa 8402557  T
Q  277 cacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||||||  |||||||| |||||||| |||||| |||||||||||    
T  8402558 cacctatggagttgcatgatttaagataaaaatgaattacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattga 8402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 119 - 318
Target Start/End: Complemental strand, 18474435 - 18474236
Alignment:
Q  119 tcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatc 218  Q
    ||||| |||||| |||||||||| |||||||||   |   ||||||| |||||||| || ||||||| ||||||||  |||||| || | ||  | ||||    
T  18474435 tcttgcaatgcattggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaaattcaatctttacatcttcgatc 18474336  T
Q  219 ctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    || || || ||||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||  |||||||||||    
T  18474335 cttcatgtaatgtcttgtgttcccgatttacatgatttctcactgaaaagactcaaaacacctatggagttgcatgatttaggataacagtgaattacaa 18474236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 110 - 275
Target Start/End: Complemental strand, 26418994 - 26418829
Alignment:
Q  110 gttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgata 209  Q
    |||| |||||||||||||||  || ||| || |||||||||| ||| | ||||||| |||| |||||| |||||||||||||  ||||| ||| || |||    
T  26418994 gttcttccatcttgaaatgccttgcaacatgggatgaattttccccaatttgtattttctttaaaaaccttctaagaaccatcaatctttaatcttcata 26418895  T
Q  210 tacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaa 275  Q
    | ||||||||| || | |||||||| |||| | ||||||||||||||||||||||||||| |||||    
T  26418894 tccttgatccttcatgcgatgtcttatttttccgatttacatgatttctcactaaaaagattcaaa 26418829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 344
Target Start/End: Complemental strand, 19285322 - 19285139
Alignment:
Q  160 tgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctc 259  Q
    |||||| |||||||| || ||| |||||||||||||  ||||| ||||||| || |||||| ||  |||| ||||||||| |||||||||| ||| ||||    
T  19285322 tgtattgtcttcaaataccttccaagaaccattgattatcaatcttgatat-ctcgatcctacatttgatatcttgtttttctgatttacacgatatctc 19285224  T
Q  260 actaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaat 344  Q
    || ||| |||||| ||||||||| |||||  |  ||||||||| |||  |||||||||||||||  |||||||||||||||||||    
T  19285223 acgaaagagactcgaaacacctaaggagttgctggatttaggacaaaattgaattacaacgactcgaatgaaaataatacaaaat 19285139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 359
Target Start/End: Complemental strand, 26297934 - 26297774
Alignment:
Q  197 ttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgat 296  Q
    |||||| || |||| || |||||| ||| |||||||||||||| | |||||||||||||| |||||||| ||||||  ||||| |||| |||  ||||||    
T  26297934 ttcaatcttcatatcctcgatccttcacttgatgtcttgttttgccgatttacatgatttatcactaaatagactc--aacacatatgaagttgcatgat 26297837  T
Q  297 ttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccatt 359  Q
    ||||||||||  |||||||||||||||  |||||||| |||| |||| ||| | |||||||||    
T  26297836 ttaggataaaattgaattacaacgactcgaatgaaaacaatataaaaagtttctcaaaccatt 26297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 133 - 341
Target Start/End: Complemental strand, 10342038 - 10341838
Alignment:
Q  133 ggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtc 232  Q
    ||||||||| |||| |||||| |   ||||||| ||||||||||| |||||||||||| ||||||||||| ||  ||| ||| ||||| ||| ||||||     
T  10342038 ggaacttgaaatgagtttttctcactttgtattgtcttcaaaaaccttctaagaaccactgatcttcaatctttctatccttaatccttcacttgatgtt 10341939  T
Q  233 ttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaa 332  Q
    | | |||  |||||||||||||||||||| |        |||||||||||||||||  |||||||| | ||||| ||||||||||||||||  | |||||    
T  10341938 tggatttgttgatttacatgatttctcacaa--------caaaacacctatggagttgcatgattttgaataaaagtgaattacaacgactttagtgaaa 10341847  T
Q  333 ataatacaa 341  Q
    | |||||||    
T  10341846 acaatacaa 10341838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 354
Target Start/End: Complemental strand, 21018102 - 21017907
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||||||||||||||  || ||  |||||||| |||||||| || ||||  |||||||| ||||| |||||||| |||  ||| |||||||||||||    
T  21018102 ttgtattatcttcaaaaaagttatagaaaccattggtcttcaat-ttcatatcattgatccttcacgtaatgtcttgatttgttgaattacatgatttct 21018004  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    || || |||| ||||||||||| | | ||||  |||||| |||||||||  |||||||||||||||    ||||||||||| || ||||||| ||||    
T  21018003 caatacaaaacactcaaaacacatttagagttgcatgatctaggataaaactgaattacaacgactcggttgaaaataatataatatgttcctcaaa 21017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 361
Target Start/End: Complemental strand, 33578004 - 33577757
Alignment:
Q  108 gcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattga 207  Q
    |||||| ||||||||||||||   || |||||||||||| |||||||| || |||||| ||||||||||        ||| |||| ||||||| | || |    
T  33578004 gcgttcttccatcttgaaatgtcttgaaacttgagatgattttttcccaacatgtattgtcttcaaaaat-------gaatcatttatcttcattcttca 33577912  T
Q  208 tatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||||| |||||||| || ||||||||||  ||| | |||||||||| ||| ||  |||||||||||||| |||| |||  ||  |||||||||||||| |    
T  33577911 tataccttgatccttcatgtgatgtcttactttgccgatttacatgttttttctttaaaaagactcaaaccaccaatgaggttgcatgatttaggatata 33577812  T
Q  307 cgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
      |||||||||| || | |||| |||| ||||||||| ||||  |||||||||||    
T  33577811 aatgaattacaatgaatcaaataaaaacaatacaaaacgttcttcaaaccattga 33577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 26797191 - 26797313
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    ||||||||| ||| ||||||||||||||   |||||||||||| |||| |||||||||||| ||||||||||| |||  ||||||||||||||||   ||    
T  26797191 cttgatccttcacttgatgtcttgttttgtcgatttacatgatatctctctaaaaagactc-aaacacctatgaagttgcatgatttaggataaaacaga 26797289  T
Q  312 attacaacgactaaaatgaaaata 335  Q
    |||| |||||||  ||||||||||    
T  26797290 attataacgactcgaatgaaaata 26797313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 30493228 - 30493338
Alignment:
Q  234 tgttttactgatttacatgattt-ctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaa 332  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||| ||||| |  ||||||||||||||||  | || ||||||||||  |||||||    
T  30493228 tgttttgcttatttacatgattttctcactaaaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaa 30493327  T
Q  333 ataatacaaaa 343  Q
    | |||||||||    
T  30493328 acaatacaaaa 30493338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 361
Target Start/End: Complemental strand, 11521311 - 11521163
Alignment:
Q  213 ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    |||||||||||||| |||| ||| |||  |||||||||||||| ||||||| |||| |||||||||| ||||||| |  |||||| |||||||||  |||    
T  11521311 ttgatcctccacgtaatgttttgatttgttgatttacatgattcctcactacaaaacactcaaaacaactatggacttgcatgatctaggataaaactga 11521212  T
Q  312 attacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||| | | | || | |||||||||||| ||||||| |||||||||||    
T  11521211 attaca-caaatcaagtaaaaataatacaatatgttcctcaaaccattga 11521163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 361
Target Start/End: Complemental strand, 13911408 - 13911288
Alignment:
Q  242 tgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataataca 340  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||| |||  |||||| ||||||||| ||||||||||| || | || |||||| |||||     
T  13911408 tgatttacatgatttctcactacaaaacactaaaaacacatatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaatacc 13911309  T
Q  341 aaatgttccacaaaccattga 361  Q
    | ||||||| |||||||||||    
T  13911308 atatgttcctcaaaccattga 13911288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 1475169 - 1475372
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaa-tattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    ||||||||||||||| ||| ||||||||||  ||||||||||| | || ||   ||||||||| ||| |||||||||| |||  |||||||||| |||      
T  1475169 ttgtattatcttcaataaccttctaagaactcttgatcttcaactcttcatc--cttgatccttcacatgatgtcttgatttgatgatttacattattct 1475266  T
Q  258 tcactaa-aaagactcaaa-acacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaac 355  Q
    ||||||  ||| ||||||| | ||| |||||||  |||||| ||||||| |  |||||||||||||||  | |||||||||||||| || |||| |||||    
T  1475267 tcactacgaaacactcaaatatacccatggagttgcatgatctaggatataattgaattacaacgactcgagtgaaaataatacaatatattcctcaaac 1475366  T
Q  356 cattga 361  Q
    ||||||    
T  1475367 cattga 1475372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 343
Target Start/End: Original strand, 5632405 - 5632607
Alignment:
Q  132 tggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgt 231  Q
    |||||||||| |||||||||   | | || ||||||||||||| || || |||||||| ||| |||||||| || ||||  |  || ||||| |||||||    
T  5632405 tggaacttgaaatgaattttcttcaatttttattatcttcaaataccttataagaaccgttg-tcttcaatctttatattatcaattctccatgtgatgt 5632503  T
Q  232 cttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaa 331  Q
    |||| |||   |||||||||||||||||||||        |||||||||||||||||  ||||||| | |||||| |||||||||||||| | |||||||    
T  5632504 cttggtttgtcgatttacatgatttctcacta--------caaaacacctatggagttgcatgattcaagataaaagtgaattacaacgaatcaaatgaa 5632595  T
Q  332 aataatacaaaa 343  Q
    || || ||||||    
T  5632596 aacaacacaaaa 5632607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 97 - 284
Target Start/End: Complemental strand, 21813775 - 21813586
Alignment:
Q  97 tcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatc 196  Q
    ||||||||||||| |||  ||||||  |||||   ||||||||| ||| | |||||||| ||||||||||||||||||| | ||||||| | | ||||||    
T  21813775 tcttttttcgagcattctaccatctaaaaatgtcttggaacttgggataattttttcccaacttgtattatcttcaaaatccttctaagtaactttgatc 21813676  T
Q  197 ttcaatattgatat-acttgatcctccacgtgatgtcttgttttactgatttacatgatttctcact-aaaaagactcaaaacacctatg 284  Q
     ||| | || ||||  ||| |||||| || || ||||||||||| |||| ||||||| ||| ||| | |||||||||||||| |||||||    
T  21813675 atcattcttcatatcccttaatcctcaacttggtgtcttgttttgctgaattacatggtttatcaataaaaaagactcaaaatacctatg 21813586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 354
Target Start/End: Complemental strand, 25883328 - 25883133
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||  |   || |||||||||  ||  ||||||||| |||  |||| ||||||||| ||    
T  25883328 ttgtattgtcttcaacaaccttctaagaacccttgatcttcaattcttc-atccttgatccttaacaagatgtcttgatttgatgatgtacatgattcct 25883230  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    ||||| |||| |||||||||||||||| |||  ||| || |||||||||  ||||||||||||| |  | |||||| |||| || ||||||| ||||    
T  25883229 cactataaaacactcaaaacacctatgtagttgcataatctaggataaaactgaattacaacgattcgagtgaaaacaatataatatgttcctcaaa 25883133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 316
Target Start/End: Original strand, 25919365 - 25919509
Alignment:
Q  163 attatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcact 262  Q
    ||||||||||||||||| |||| || | |||||||||||| || |||| ||||||||| || ||||| ||||| |||   ||||||||||||| ||||||    
T  25919365 attatcttcaaaaactt-ctaaaaatcgttgatcttcaatcttcatatccttgatccttcatgtgatatcttggtttgtcgatttacatgattcctcact 25919463  T
Q  263 aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattac 316  Q
    |        ||||||| |||||||||  |||||||||||||||| |||||||||    
T  25919464 a--------caaaacatctatggagttgcatgatttaggataaaagtgaattac 25919509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 318
Target Start/End: Complemental strand, 25188985 - 25188823
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatt 255  Q
    ||||||||| |||| |||||| |  |||||||||||||| |||| | || |||| | |||||||| |  ||||||||||| ||||||||||| |||||||    
T  25188985 acttgtattgtcttaaaaaacctcttaagaaccattgatattcattcttcatattccttgatccttcttgtgatgtcttgctttactgattttcatgatt 25188886  T
Q  256 tctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaa 318  Q
    |  ||  |||| | ||||||| |  ||||||||  ||||||||| |||||| |||||||||||    
T  25188885 taacaacaaaacggctcaaaatatatatggagttgcatgatttatgataaaagtgaattacaa 25188823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 361
Target Start/End: Original strand, 33914504 - 33914654
Alignment:
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataa 305  Q
    |||| ||||||||| |||||||||||||| ||    ||||||||||||||||||||| |||| |||||||||    || ||||  |||||||| |||| |    
T  33914504 atatccttgatccttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaaaac----atagagttgcatgatttgggat-a 33914598  T
Q  306 acgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||||||||  | | |||| ||||||| ||||||| |||||| ||||    
T  33914599 acgtgaattacaacgactcgagtaaaaacaatacaatatgttcctcaaaccgttga 33914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 16970360 - 16970291
Alignment:
Q  263 aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaa 332  Q
    ||||| |||| ||||||| ||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  16970360 aaaaacactctaaacacccatgaagttttatgatttaggataaacgtgaattacaacgacttaaatgaaa 16970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 16970688 - 16970591
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatt 255  Q
    |||||||| ||||||||||| ||||||||||| ||| |||||||  || |||| ||||||||| ||| |||||||||| |||   |||||||||||||    
T  16970688 cttgtattttcttcaaaaaccttctaagaaccgttggtcttcaaacttcatatccttgatccttcacatgatgtcttgatttgtcgatttacatgatt 16970591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 343
Target Start/End: Complemental strand, 28422677 - 28422494
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || |||||| | | ||||| ||||||| || |||| ||  ||||| |||||||||| ||| |||   ||| ||||||||||||    
T  28422677 ttgtattgtcttcaaataccttctaacatc-attgaacttcaatcttcatatcctcaatccttcacgtgatgtattgatttgtcgatctacatgatttct 28422579  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    ||||| |||| | |||||||||| || ||||  ||||||||| |||||| ||||||||||| || |  |||||||| |||||||||    
T  28422578 cactacaaaacattcaaaacaccaattgagttgcatgattta-gataaaagtgaattacaatgattcgaatgaaaacaatacaaaa 28422494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 361
Target Start/End: Original strand, 19263809 - 19263990
Alignment:
Q  172 aaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagact 271  Q
    |||||| ||||| |||||||||||||||||| || |||| ||||||||| || |||||| |||| |||   ||||| ||||||| || ||||            
T  19263809 aaaaaccttctatgaaccattgatcttcaatcttcatatccttgatccttcatgtgatgacttgatttgacgatttccatgattccttacta-------- 19263900  T
Q  272 caaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| |||| ||  || |||||||||||||| ||||||||||||||||  | ||| || |||| || ||| ||| |||||||||||    
T  19263901 caaaacacttatgcagcatcctgatttaggataaaagtgaattacaacgactctagtgacaacaatataatatgatcctcaaaccattga 19263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 27415309 - 27415236
Alignment:
Q  244 atttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattac 316  Q
    ||||||||||||||| |||| |||| |||||||||||||||| |||  ||||||||| |||||| |||||||||    
T  27415309 atttacatgatttcttactacaaaacactcaaaacacctatgaagttgcatgatttacgataaaagtgaattac 27415236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 12573461 - 12573313
Alignment:
Q  214 tgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaa 312  Q
    ||||||| ||||| |||||||  |||  |||||||||||||| ||||||| |||| ||| |||| ||||| ||||   |||||| |||||||||  ||||    
T  12573461 tgatccttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaa 12573362  T
Q  313 ttacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| ||  | |||||| ||||||||   |||| |||||||||||    
T  12573361 ttacaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattga 12573313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 13549925 - 13549777
Alignment:
Q  214 tgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaa 312  Q
    ||||||| ||||| |||||||  |||  |||||||||||||| ||||||| |||| ||| |||| ||||| ||||   |||||| |||||||||  ||||    
T  13549925 tgatccttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaa 13549826  T
Q  313 ttacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| ||  | |||||| ||||||||   |||| |||||||||||    
T  13549825 ttacaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattga 13549777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 19545967 - 19546075
Alignment:
Q  253 atttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccaca 352  Q
    |||||||| |||||| |||||||||| ||||  | |  |||||| ||||||||  ||||||||||| |||| |||| |||| ||||||| | ||||| ||    
T  19545967 atttctcattaaaaaaactcaaaacaactataaaattacatgatataggataatagtgaattacaatgactcaaataaaaacaatacaataagttcctca 19546066  T
Q  353 aaccattga 361  Q
    |||||||||    
T  19546067 aaccattga 19546075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 10342383 - 10342332
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| | ||||||||||||||| ||||| ||||||||||||||||||||    
T  10342383 acatcataacaaaataatagaaaaatataccctagagagaacaagaggagga 10342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 12409533 - 12409481
Alignment:
Q  309 tgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||||||||| || |||||||||||||| ||||||  |||||||||||    
T  12409533 tgaattacaacgactcaagtgaaaataatacaatatgttcttcaaaccattga 12409481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 14280792 - 14280828
Alignment:
Q  24 aatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14280792 aatagaaaaacataccctagagagaacaagaggagga 14280828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 37626644 - 37626700
Alignment:
Q  381 aaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttaggt 437  Q
    ||||||||||||||||| |||||| || |||||| ||||||| ||||| ||||||||    
T  37626644 aaatgttggatatataagagaggtcatacatatacctaatgtcttaagattttaggt 37626700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 2729591 - 2729698
Alignment:
Q  243 gatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaa 341  Q
    |||||||| ||||| |||||| |||| ||||||||||| |||| |||  |||| |||||||||||  |||||||||| ||||  | |||||| |||| ||    
T  2729591 gatttacaagatttatcactacaaaacactcaaaacacatatgaagttgcatggtttaggataaaaatgaattacaaggactcgagtgaaaacaatataa 2729690  T
Q  342 aatgttcc 349  Q
     |||||||    
T  2729691 tatgttcc 2729698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 19542579 - 19542630
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| ||||| || |||||||| ||||| ||||||||||||||||||||    
T  19542579 acatcattataaactagtagaaaaatataccctagagagaacaagaggagga 19542630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 19543013 - 19543112
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || |||||||||| |||||  |||||| || | || || |||||| || |||||||||||| || | |||| |||||||||||    
T  19543013 ttgtattgtcttcaaataccttctaagaactattgaaattcaatctttacattctcgatccttcatgtgatgtcttgtgttcccgattaacatgatttct 19543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 21653650 - 21653531
Alignment:
Q  81 aattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatctt-caaaaact- 178  Q
    |||| |||| ||||| || |||||||||||||| ||  |||||||||||  |  |||||| |||||||||| ||| |||| |||| |||| |||||| |     
T  21653650 aattctgcaattttcatcctttttcgagcgttcttcggtcttgaaatgccttaaaacttgggatgaattttgcccaacttttattgtcttacaaaaaatc 21653551  T
Q  179 ttctaagaaccattgatctt 198  Q
    || |||||||||||||||||    
T  21653550 ttataagaaccattgatctt 21653531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 26484834 - 26484767
Alignment:
Q  219 ctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatgga 286  Q
    ||||| ||||||||||| ||| | |||||||||||||| |||| |||| |||||||||| ||| ||||    
T  26484834 ctccatgtgatgtcttgatttgccgatttacatgatttatcaccaaaatgactcaaaacgcctttgga 26484767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 357
Target Start/End: Original strand, 4775729 - 4775795
Alignment:
Q  291 catgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    |||||| ||||||||  |||||||||||||||| |  |||||| |||| || |||||||||||||||    
T  4775729 catgatctaggataagagtgaattacaacgactcaggtgaaaacaataaaatatgttccacaaacca 4775795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 361
Target Start/End: Original strand, 27374398 - 27374543
Alignment:
Q  215 gatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatt 314  Q
    |||||| ||| |||| ||||||||| |  ||| |||||||||| |||||||| || |||||  ||||| | |||  ||||||||||||||||  || |||    
T  27374398 gatccttcacatgatctcttgttttgccaattcacatgatttcgcactaaaa-gattcaaataacctacgaagttgcatgatttaggataaaactggatt 27374496  T
Q  315 acaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    | || ||||  |||||||| |||||||||  ||||  ||||||||||    
T  27374497 ataatgactcgaatgaaaacaatacaaaaacttccttaaaccattga 27374543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 43481617 - 43481687
Alignment:
Q  367 actaggattggaggaaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttaggt 437  Q
    ||||||| ||||||||||||||||||||||| ||||| ||  |||||| || |||  ||||| ||||||||    
T  43481617 actaggaatggaggaaatgttggatatataagagaggggacccatatacctgatgcattaagattttaggt 43481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 21654000 - 21653948
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggaggag 61  Q
    ||||||| | ||||||| |||||||||| || |||||||||||| ||||||||    
T  21654000 acatcattacaaaataagagaaaaacatgccctagagagaacaaaaggaggag 21653948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 22488355 - 22488407
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||| ||| |||||||||| | ||||||||||||||||||||    
T  22488355 gacatcattacaaaacaattgaaaaacatatcctagagagaacaagaggagga 22488407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27415735 - 27415691
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggaggagga 63  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||    
T  27415735 aaaacaatagaaaaagataccccagagagaacaagaggaggagga 27415691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 158 - 342
Target Start/End: Original strand, 5312674 - 5312858
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| ||||||||||  |||||||||||||| || ||||||  | |||| ||||||||| ||| |||||| |  |||| | ||||||||||||||     
T  5312674 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtttatttttgccgatttacatgattta 5312773  T
Q  258 tcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    |||||||||||||||||||||||||||||||  |||| | || |||||| |||||||||||||||| ||||||||| ||||||||    
T  5312774 tcactaaaaagactcaaaacacctatggagttgcatgctataagataaaagtgaattacaacgactcaaatgaaaacaatacaaa 5312858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 90 - 361
Target Start/End: Complemental strand, 18496859 - 18496588
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    ||||||| | |||||||| ||||| | | |||||||||||  |||||||||| |||||||||   |  |||||||| ||||||| ||| |||||||||||    
T  18496859 tttttcgccctttttcgaccgttcttacgtcttgaaatgccttggaacttgaaatgaattttcttcatcttgtattttcttcaacaacattctaagaacc 18496760  T
Q  190 attgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtc 289  Q
    |||  |||||||| || |||| ||||||||| |||  ||||||  ||||| | |||||||||||| |||||| ||| || ||||||||||||||| ||||    
T  18496759 attattcttcaatcttcatatccttgatccttcactcgatgtcccgtttttccgatttacatgatatctcaccaaataggctcaaaacacctatgaagtc 18496660  T
Q  290 tcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
     ||||||||||||||||  |||||||||| || |  |||||||| ||| ||||  ||||| ||||| |||||    
T  18496659 gcatgatttaggataaaaatgaattacaatgattcgaatgaaaacaattcaaatagttcctcaaacaattga 18496588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 159 - 359
Target Start/End: Complemental strand, 30405819 - 30405621
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| | |||||| || ||||||||| |||||| ||||||| || |||| || |||||| ||| |||| |||| |||| | ||||||||||||||||    
T  30405819 ttgtattgtattcaaataccttctaagaatcattgaacttcaatcttcatatcctcgatccttcacatgatttcttattttgccgatttacatgatttct 30405720  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    ||||||||| ||||||||||||||||||||  |||| ||||||||||| ||||||||||| || | |||| |||| ||||||||| ||||| ||||||||    
T  30405719 cactaaaaa-actcaaaacacctatggagttgcatggtttaggataaa-gtgaattacaatgagtcaaataaaaacaatacaaaaagttcctcaaaccat 30405622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 357
Target Start/End: Original strand, 3268878 - 3269053
Alignment:
Q  182 taagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacct 281  Q
    |||||| |||| || |||| | || |||||||||||||| || ||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||| |    
T  3268878 taagaatcattaattttcattcttcatatacttgatccttcatgtgatatcttgttttgccgatttacatgatttctcactaaaaagacttaaaacacat 3268977  T
Q  282 atggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    | | |||  |||||||||||||||| |||||||||||| ||| ||| ||||| ||||||||||||| | |||||||    
T  3268978 acgaagttgcatgatttaggataaaagtgaattacaacaactcaaacgaaaacaatacaaaatgttactcaaacca 3269053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 179 - 323
Target Start/End: Original strand, 24596913 - 24597057
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    ||||| |||||| ||| ||||||| || |||| || |||| |||||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||    
T  24596913 ttctatgaaccactgaacttcaatctttatatcctcgatcttccacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaaca 24597012  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
    |||| |||||  ||||||||||||||||  |||||||||||||||    
T  24597013 cctacggagttgcatgatttaggataaaattgaattacaacgact 24597057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 162 - 344
Target Start/End: Original strand, 12358655 - 12358836
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac 261  Q
    |||| ||||||||||| |||||||||||||||||||||||| || |||| ||||||| || |   ||| | ||| ||| | |||||| || |||||||||    
T  12358655 tattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatcttc-ataagatattttgcttttccgatttatattatttctcac 12358753  T
Q  262 taaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaat 344  Q
    ||||||||||||||||||||||| |||   |||||||||||||||  ||||||||||||||| |||||| || ||||||||||    
T  12358754 taaaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaacgactcaaatgagaaaaatacaaaat 12358836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 29544745 - 29544542
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||| || ||||  |||||||| || ||||||||||| |||   ||||||||||||| ||    
T  29544745 ttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttcatatctttgatccttcatgtgatgtcttggtttgtcgatttacatgattcct 29544646  T
Q  259 cact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
     ||| ||||| ||||||||||| |||||| |  ||  |||||||| ||| ||||||||||||||||  | |||||| ||||||| ||||||| ||||| |    
T  29544645 tactaaaaaacactcaaaacacttatggaattgcacaatttaggagaaaagtgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaacta 29544546  T
Q  358 ttga 361  Q
    ||||    
T  29544545 ttga 29544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 195 - 361
Target Start/End: Original strand, 20461573 - 20461739
Alignment:
Q  195 tcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatg 294  Q
    |||||||| || |||| ||||||||| ||| ||||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||   ||  | ||    
T  20461573 tcttcaatcttcatatccttgatccttcacttgatgtcttattttgccgatttacatgatttctcactaaaaagactcgaaacacctatcatgttgcgtg 20461672  T
Q  295 atttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||||||| ||  ||| |||||||||||  |||||||| |||||||| |||||| |||||||||||    
T  20461673 atttaggatgaaattgagttacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattga 20461739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 341
Target Start/End: Original strand, 8308974 - 8309103
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtga 311  Q
    |||||| || |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||  ||||||||||||||||  | |    
T  8308974 cttgattcttcacgtgatgtcttgttttgctgatttacatgatttcttactaaaaagactcaaaacatgtatggagttgcatgatttaggataaaactaa 8309073  T
Q  312 attacaacgactaaaatgaaaataatacaa 341  Q
    || |||| |||| ||||||||| |||||||    
T  8309074 atcacaatgactcaaatgaaaacaatacaa 8309103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 9761313 - 9761493
Alignment:
Q  167 tcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaa-a 265  Q
    |||| |||||| || ||||||||||||| ||||||| || |||| ||||||||| |||||||||||||| |||   |||||||||||||| ||||||  |    
T  9761313 tctttaaaaaccttttaagaaccattga-cttcaatcttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgatttatcactatta 9761411  T
Q  266 aagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    || |||||||||||||||||| |  ||| || ||||||||| ||||||||||||||||| | |||||| ||||||| |||||    
T  9761412 aaaactcaaaacacctatggaattgcataatctaggataaaagtgaattacaacgactagagtgaaaaaaatacaatatgtt 9761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 158 - 361
Target Start/End: Complemental strand, 1074679 - 1074475
Alignment:
Q  158 cttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttc 257  Q
    |||||||| ||||||| ||| || |||||||||||| |||||||| || |||| |||||||||  || |||||||||| ||| |  ||||||||||||||    
T  1074679 cttgtattgtcttcaacaaccttttaagaaccattggtcttcaattttcatatccttgatcctttacttgatgtcttgcttttccaatttacatgatttc 1074580  T
Q  258 tcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacc 356  Q
    |||||| ||||||| |||||||| ||||||||   || |||||||||||| |  |||||||| || |  ||||||||||||||||   ||||| ||||||    
T  1074579 tcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaattacaatgaatcgaatgaaaataatacaattggttcctcaaacc 1074480  T
Q  357 attga 361  Q
    |||||    
T  1074479 attga 1074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 20470699 - 20470902
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||| | || ||||||| | || | ||||||||| |||   |||||||||| ||| |    
T  20470699 ttgtattgtcttcaagaaccttctaagaaccattgaacttcaatattcacatccttgatcgttcatgcgatgtcttgatttgtcgatttacatgctttat 20470798  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| |||||||||| ||||| ||   ||||||||||| | || |||||||||||||||| || |||||| |||| || ||||||| |||||||    
T  20470799 cactataaaacactcaaaacagctatgcagatgcatgatttaggctgaaagtgaattacaacgacttaagtgaaaacaatataatatgttcctcaaacca 20470898  T
Q  358 ttga 361  Q
    ||||    
T  20470899 ttga 20470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 358
Target Start/End: Original strand, 22532507 - 22532732
Alignment:
Q  132 tggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgt 231  Q
    |||||||||||||||||||| |   ||||| ||| ||||||||||||||||||||||||||||| |||| | ||  ||| || |||||  || |||||||    
T  22532507 tggaacttgagatgaattttccataacttggattgtcttcaaaaactttctaagaaccattgatattcattcttcgtatcctcgatccatcatgtgatgt 22532606  T
Q  232 cttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatga--tttaggataaacgtgaattacaacgactaaaatg 329  Q
    |||| ||| | ||||||||||||||||||||||||| ||||| |||||  ||  |||  |||||  ||||||||||| |||||||| | ||| |  ||||    
T  22532607 cttg-tttgccgatttacatgatttctcactaaaaatactcataacac--atcaagttccatgatttttaggataaaagtgaattatagcgaatccaatg 22532703  T
Q  330 aaaataatacaaaatgttccacaaaccat 358  Q
    |||| |||| |||||||||| ||||||||    
T  22532704 aaaacaatagaaaatgttcctcaaaccat 22532732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 347
Target Start/End: Original strand, 9801764 - 9801952
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||| |||||| || ||||||||||||| ||||||| || |||| ||||||||| ||| |||||| ||| |||   |||||||||||||| |    
T  9801764 ttgtattttctttaaaaaccttttaagaaccattga-cttcaatcttcatatccttgatccttcacatgatgttttgatttgtcgatttacatgatttat 9801862  T
Q  259 cactaa-aaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgtt 347  Q
    |||||  ||| |||||||||||||||||| |  ||| || ||||||||| ||||||||||||||||| | |||||| ||||||| |||||    
T  9801863 cactattaaaaactcaaaacacctatggaattgcataatctaggataaaagtgaattacaacgactagagtgaaaaaaatacaatatgtt 9801952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 23125103 - 23124935
Alignment:
Q  182 taagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacc 280  Q
    ||||||||||||| ||||||| || |||| || |||||| ||| |||||||||| ||    ||||||||||||||||||||| |||| ||||||||||||    
T  23125103 taagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtcttgattggtcgatttacatgatttctcactagaaaacactcaaaacacc 23125004  T
Q  281 tatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    ||| ||||   ||||||| ||||||| ||||||||||||||||  | |||||| ||||||| |||||||    
T  23125003 tatagagttgtatgattttggataaatgtgaattacaacgactcgagtgaaaacaatacaatatgttcc 23124935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 361
Target Start/End: Complemental strand, 7142323 - 7142121
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||||||| |  ||| |||||| ||  |||||| || ||||  |||||||| |||||||||||||| |||   ||||||||||||||||    
T  7142323 ttgtattctcttcaaaaacctattaaaaaccatcgaa-ttcaatcttcatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttct 7142225  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||| |||| ||| ||||||||||||||||  |||||| | ||||||| ||||||||||||||||  | |||||  |||| || |||||||  ||||||    
T  7142224 cactacaaaacacttaaaacacctatggagttgcatgatcttggataaaagtgaattacaacgactcgagtgaaagcaataaaatatgttccttaaacca 7142125  T
Q  358 ttga 361  Q
    ||||    
T  7142124 ttga 7142121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 91 - 354
Target Start/End: Original strand, 2353062 - 2353326
Alignment:
Q  91 ttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacca 190  Q
    ||||| || ||||||||||| || ||| |||||||| ||  | |||||||||||||||||||| |  | |||||| |||  ||| || |||||| |||||    
T  2353062 ttttcatcctttttcgagcgatcttccgtcttgaaaagccttagaacttgagatgaatttttctcatcatgtattgtctataaacaccttctaataacca 2353161  T
Q  191 ttgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatt----tctcactaaaaagactcaaaacacctatgg 285  Q
    |||||||||| | || | || | |||||||  || | ||||||||| |||   |||||||||||||    ||||||||||||| | ||||||||||||||    
T  2353162 ttgatcttcatttttcacatccattgatccatcatgagatgtcttgctttgtcgatttacatgattaatttctcactaaaaaggcccaaaacacctatgg 2353261  T
Q  286 agtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    |||  |||||||||||||    ||||||||||||| ||  |||||| | ||||||||||||||| ||||    
T  2353262 agttgcatgatttaggat----gtgaattacaacgtctcgaatgaatacaatacaaaatgttccccaaa 2353326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 349
Target Start/End: Original strand, 17881460 - 17881578
Alignment:
Q  231 tcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatga 330  Q
    ||||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||  ||||||||| ||||||  | |||||||| || |  |||||    
T  17881460 tcttgtttttccgatttacatgacttctcactaaaaagactcaaaatacctattaagttgcatgatttatgataaaattaaattacaatgattcgaatga 17881559  T
Q  331 aaataatacaaaatgttcc 349  Q
    ||||||||||||| |||||    
T  17881560 aaataatacaaaaagttcc 17881578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 14649732 - 14649609
Alignment:
Q  148 tttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgattt 247  Q
    |||| ||| ||||||||| ||||||||||| |||||| ||||||||||||||| |||| |||| ||||||       ||||| ||||||||| ||  |||    
T  14649732 ttttccccaacttgtattgtcttcaaaaaccttctaataaccattgatcttcattattcatatccttgat-------gtgatttcttgttttgctatttt 14649640  T
Q  248 acatgatttctcactaaaaagactcaaaaca 278  Q
    ||||||||| | |||||||||||||||||||    
T  14649639 acatgattttttactaaaaagactcaaaaca 14649609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 21472021 - 21471874
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| ||| ||||||||||| || |||||||||  |   || ||||||||  ||||||||||| || |||| |||||||||||||| ||    
T  21472021 ttgtattttcttcaataaccttctaagaaccctttatcttcaattcttc-atccttgatccctcacgtgatgtcatgatttattgatttacatgattcct 21471923  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaa 306  Q
    ||||| |||| |||||||||||||||||| |  |||||| |||||||||    
T  21471922 cactacaaaacactcaaaacacctatggaattgcatgatctaggataaa 21471874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 7372455 - 7372654
Alignment:
Q  157 acttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    ||||||||| |||| |||||  |||||||| | ||||| |||| |  || |||| ||||||||| ||  |||| ||||| ||| |||||||||| |||||    
T  7372455 acttgtattgtctttaaaaatcttctaagatc-attgaacttccagctttatatccttgatccttca--tgatatcttgatttgctgatttacaagattt 7372551  T
Q  257 ctcact-aaaaagactcaaaacacctatggagtctcatgatttag-gataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    |||||| ||||| ||| |||||||||||| |||  |||||||| | ||||||  |||||||||||||||  |||||||| ||||||||| ||||  ||||    
T  7372552 ctcactaaaaaacactgaaaacacctatgaagttgcatgatttcgtgataaaattgaattacaacgactcgaatgaaaacaatacaaaaagttcatcaaa 7372651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 22067692 - 22067898
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgat-atacttgatcctccacgtgatgtcttgttttactgatttacat--gatt 255  Q
    ||||||| ||||||| ||| ||||||||||| ||||| ||||||  || | || ||||||||| ||| |||||||||| |||  ||||||||||  ||||    
T  22067692 ttgtattgtcttcaacaaccttctaagaacccttgattttcaat--tgttcatccttgatccttcacatgatgtcttgatttgatgatttacatatgatt 22067789  T
Q  256 tctcacta-aaaagactcaaaaca--cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccaca 352  Q
     ||||||| |||| |||||||| |  ||||||||||  |||||| |||||||||  |||||||||| ||||  | |||||| ||||||  ||||||| ||    
T  22067790 cctcactacaaaacactcaaaaaatacctatggagttgcatgatctaggataaaattgaattacaatgactcgagtgaaaacaatacattatgttcctca 22067889  T
Q  353 aaccattga 361  Q
    |||||||||    
T  22067890 aaccattga 22067898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 288
Target Start/End: Complemental strand, 25706448 - 25706250
Alignment:
Q  90 tttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaacc 189  Q
    ||||| ||| || ||||||||||| ||| | ||||| ||  |||||||||| |||||||||| ||| |||| |||| ||||||||||| ||| |||||||    
T  25706448 ttttttgtccttcttcgagcgttcttccgtattgaattgtcatggaacttgggatgaattttccccaacttatattgtcttcaaaaaccttccaagaacc 25706349  T
Q  190 attgatcttcaatattgatat-acttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagt 288  Q
    |||| |||||| | || | ||  ||||||||| || | | ||||||||||| | || ||||| |||||  ||  ||||||||| ||||||||||||||||    
T  25706348 attg-tcttcactctttaaatcccttgatccttcatgaggtgtcttgtttttccgaattacaagatttagcaacaaaaagacttaaaacacctatggagt 25706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 21545719 - 21545789
Alignment:
Q  162 tattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtc 232  Q
    |||| |||||||| ||||||||||||||||||||||||||| || |||| ||||||||| |||||||||||    
T  21545719 tattgtcttcaaatactttctaagaaccattgatcttcaatcttcatatccttgatccttcacgtgatgtc 21545789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 247 - 361
Target Start/End: Complemental strand, 4828926 - 4828814
Alignment:
Q  247 tacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgt 346  Q
    |||||||||||||| |||||||||||||  || |||||||||  |||||||||||||||| || |||||||| || |  | | |||| ||||||||| ||    
T  4828926 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 4828829  T
Q  347 tccacaaaccattga 361  Q
    ||| |||||||||||    
T  4828828 tcctcaaaccattga 4828814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 361
Target Start/End: Complemental strand, 7815501 - 7815346
Alignment:
Q  207 atatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataa 305  Q
    |||| ||||||||| ||| |||||||||  |||  ||||||||||||||  |||||| |||| |||||||||||||||| |||  |||||||||| ||||    
T  7815501 atatccttgatccttcacatgatgtctttatttgttgatttacatgattcatcactacaaaacactcaaaacacctatgaagttgcatgatttagaataa 7815402  T
Q  306 acgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |  ||||||||||| ||   | |||||| ||||||| ||||| |  ||||||||||    
T  7815401 aactgaattacaaccacccgagtgaaaaaaatacaatatgtttcttaaaccattga 7815346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 361
Target Start/End: Original strand, 1255155 - 1255305
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtg 310  Q
    ||||||||| || ||||||| ||| |||  ||||||| || |||| ||| || |||| |||||||||||||||| |||  ||||||||||||||||  ||    
T  1255155 cttgatccttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaacacctatgaagttgcatgatttaggataaaaatg 1255254  T
Q  311 aattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||||||| ||||  | |||||| |||||||  | |||| |||||||||||    
T  1255255 aattacaatgactcgagtgaaaacaatacaatttattcctcaaaccattga 1255305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 7326827 - 7326884
Alignment:
Q  226 tgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctat 283  Q
    |||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  7326827 tgatgtcttgctttgctgatttatatgatttctcactaaaatgactcaaaacacctat 7326884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 21545803 - 21545891
Alignment:
Q  273 aaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    |||| ||||||| |||  |||||||||||||||| |||| |||||||||||  | |||||| ||||||| ||||||| |||||||||||    
T  21545803 aaaaaacctatgtagttgcatgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattga 21545891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 3487309 - 3487376
Alignment:
Q  213 ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacc 280  Q
    |||||||| ||  |||||||||||||| | |||| ||||||||||||| |||||||||||||||||||    
T  3487309 ttgatccttcatttgatgtcttgttttgccgattcacatgatttctcattaaaaagactcaaaacacc 3487376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 341
Target Start/End: Complemental strand, 10292923 - 10292797
Alignment:
Q  216 atcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatt 314  Q
    ||||| ||| |||||||||| |||  |||||||||||||| ||||||| |||| | || |||||||||||| ||  |||||| | |||||||  ||||||    
T  10292923 atccttcacatgatgtcttgatttgatgatttacatgattcctcactacaaaatagtctaaacacctatggtgttgcatgatcttggataaaactgaatt 10292824  T
Q  315 acaacgactaaaatgaaaataatacaa 341  Q
    |||||||||  | |||||| |||||||    
T  10292823 acaacgactcgattgaaaaaaatacaa 10292797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 343
Target Start/End: Original strand, 4977710 - 4977894
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||||   |||||| |||||| |  ||||||| || |||| || |||||| || ||||||||||| |||    |||||||||||||||    
T  4977710 ttgtattttcttcaaaagtcttctaaaaaccatagc-cttcaatcttcatatcctcgatccttcatgtgatgtcttgatttgtatatttacatgatttct 4977808  T
Q  259 cactaaaaaga-ctcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    ||||| |||   |||| |||  ||||| |||  ||| |||||||||||| ||||||||||||||||  ||||| || |||||||||    
T  4977809 cactataaaccgctcacaacctctatgaagttgcataatttaggataaaagtgaattacaacgacttgaatgataaaaatacaaaa 4977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 9552774 - 9552725
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagagga 57  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  9552774 gacatcatcacaaaataatagaaaaatataccctagagagaacaagagga 9552725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 9760728 - 9760676
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | ||||||||||||||||||||| |||||||||||| |||||||    
T  9760728 gacatcattacaaaataatagaaaaacataccttagagagaacaataggagga 9760676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 358
Target Start/End: Complemental strand, 2351301 - 2351023
Alignment:
Q  80 gaattttgcatttttcgtcttttttcgagcgttcatccatcttgaaatgcaatggaacttgagatgaatttttcccgacttgtattatcttcaaaaactt 179  Q
    ||||| ||||||||||||  ||||||||| |||| || ||||||||||      ||||||| || ||||||||||  ||||||||| |||| |||| |||    
T  2351301 gaattatgcatttttcgttctttttcgagagttcttctatcttgaaatatctgagaacttgggaagaatttttcctaacttgtattttctt-aaaagctt 2351203  T
Q  180 tctaagaaccattgatcttcaatattgatatac-ttgatcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaaca 278  Q
    | ||||  |||||||| |||| | || | || | || ||| | ||  || |||||| |||| |||| ||||| ||||| ||| |||||||||| || |||    
T  2351202 tttaagttccattgatattcattcttcaaatccattcatctttcatttgttgtcttctttttctgaattacacgatttatcaataaaaagacttaagaca 2351103  T
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
    |||||  |||| |||||||  |||  ||  ||||||||||  |||  |||||||| ||||||||||||| | ||||||||    
T  2351102 cctataaagtcgcatgattatggaagaaattgaattacaataactggaatgaaaacaatacaaaatgtttctcaaaccat 2351023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 37145032 - 37144961
Alignment:
Q  272 caaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaa 343  Q
    ||||||||||| |||||  ||||||||||||||||  |  ||||||||||||  ||||||||||||||||||    
T  37145032 caaaacacctacggagttgcatgatttaggataaaaatatattacaacgacttgaatgaaaataatacaaaa 37144961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 7777580 - 7777626
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagag 55  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||    
T  7777580 acatcataataaaacaatagaaaaacataccctagagagaacaagag 7777626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 9801171 - 9801118
Alignment:
Q  7 ggacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||||| | |||||||| |||||||| ||| ||||||||||||||||||||    
T  9801171 ggacatcattacaaaataattgaaaaacacaccctagagagaacaagaggagga 9801118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 2632436 - 2632516
Alignment:
Q  269 actcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    |||||||||||||||| |||  |||||| | |||||||  ||||||||||||| |  | |||||||||||||| |||||||    
T  2632436 actcaaaacacctatgaagttgcatgatcttggataaaactgaattacaacgattcgattgaaaataatacaatatgttcc 2632516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 5312265 - 5312317
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||| ||| |||||||||||| ||||||||||||||||||||    
T  5312265 gacatcattacaaaacaattgaaaaacataccctagagagaacaagaggagga 5312317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 19140020 - 19140060
Alignment:
Q  309 tgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  19140020 tgaattacaacgactcaaataaaaataatacaaaatgttcc 19140060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 20739419 - 20739459
Alignment:
Q  309 tgaattacaacgactaaaatgaaaataatacaaaatgttcc 349  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  20739419 tgaattacaacgactcaaataaaaataatacaaaatgttcc 20739459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 354
Target Start/End: Complemental strand, 46054920 - 46054728
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| |||||| ||||| | ||| ||||||||| || ||||  || |||||  | |||| |||||||||| |  |||||||| ||||||    
T  46054920 ttgtattgtcttcaacaactttgtaagatc-attaatcttcaatcttcatatctttaatcctttatgtgacgtcttgttttgccaatttacataatttct 46054822  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
     |||||| || ||||||||   |||| |||  |||||||||  ||||| || |||||||||||||  ||| |||| |||| ||| |||||| ||||    
T  46054821 aactaaagaggctcaaaact--tatgaagttgcatgatttattataaaagtaaattacaacgacttgaattaaaacaatataaattgttcctcaaa 46054728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 7956286 - 7956223
Alignment:
Q  279 cctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaa 342  Q
    |||||||||| || ||||||| |||||| | ||||||||||||||  |||||||| ||||||||    
T  7956286 cctatggagtttcttgatttaagataaaagcgaattacaacgactcgaatgaaaacaatacaaa 7956223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 17880430 - 17880481
Alignment:
Q  9 acatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    ||||||| | |||||||||  ||||||||||||||||||||||| |||||||    
T  17880430 acatcattacaaaataataataaaacataccatagagagaacaataggagga 17880481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 24596482 - 24596531
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagagga 57  Q
    |||||||| |||||| |||| ||||||||||  |||||||||||||||||    
T  24596482 gacatcattataaaacaatataaaaacatacactagagagaacaagagga 24596531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 31412559 - 31412620
Alignment:
Q  375 tggaggaaatgttggatatataatagaggtgattcatatatctaatgttttaaggttttagg 436  Q
    |||| |||| ||||||||| ||| ||||||  |||||||||||||||| |||||| ||||||    
T  31412559 tggatgaaaggttggatatgtaagagaggtagttcatatatctaatgtcttaaggatttagg 31412620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 4829428 - 4829388
Alignment:
Q  20 aaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| ||||||||||||| | ||||||||||||||||||||    
T  4829428 aaatcatagaaaaacatatcttagagagaacaagaggagga 4829388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 7494901 - 7494818
Alignment:
Q  179 ttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta 263  Q
    |||||||||||||| | ||||||| || |||| ||||||||| || ||||||||||| |||    |||||||||||||| |||||    
T  7494901 ttctaagaaccattaa-cttcaatcttcatatccttgatccttcatgtgatgtcttgatttttcaatttacatgatttcccacta 7494818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 20017178 - 20017103
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttg 235  Q
    ||||||| ||||||| ||| ||||||||||||||||  |||||| || |||| ||| ||||| ||| ||||||||||    
T  20017178 ttgtattgtcttcaagaaccttctaagaaccattga-gttcaatcttcatatgcttaatccttcacatgatgtcttg 20017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 159 - 323
Target Start/End: Original strand, 26844 - 27009
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||| || |||| ||||||| | |||||||||||||  |||   ||||||||||||||||    
T  26844 ttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttcacgtgatgtcttaatttgtcgatttacatgatttct 26943  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgact 323  Q
    |||||  ||| |||||||||||||||| |||   ||||||||||||||| || |||||||| ||||    
T  26944 cactactaaacactcaaaacacctatgtagttgtatgatttaggataaaagtaaattacaatgact 27009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 159 - 365
Target Start/End: Complemental strand, 21623 - 21416
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||| |||||| |||||||||||||||||||||||| || ||||  |||||||| || || |||||||| |||   ||||||||||||| ||    
T  21623 ttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttcatgtaatgtcttggtttgtcgatttacatgattcct 21524  T
Q  259 cact-aaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaacca 357  Q
    ||||  |||| || |||||||  |||| |||  |||||||||||||||| ||||||||||||||||  | |||||| ||||||| | ||||| ||||||     
T  21523 cactgcaaaacacccaaaacaattatgaagttgcatgatttaggataaaagtgaattacaacgactcgagtgaaaacaatacaataagttcctcaaaccc 21424  T
Q  358 ttgagatc 365  Q
    || |||||    
T  21423 tttagatc 21416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 6420 - 6324
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgattt 256  Q
    ||||||| ||||||||||  ||||| ||||||||| |||||||| || |||| ||||||||| |||||||||||||| |||   ||||||||||||||    
T  6420 ttgtattttcttcaaaaatcttctaggaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgattt 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 159 - 354
Target Start/End: Original strand, 228076 - 228269
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||||| ||| ||| |||||| |||||||||||||| |||   ||||||||||||||||    
T  228076 ttgtattgtcttcaaataccttctaagaaccattg-tcttcaatattcatacactcgatccttcacgtgatgtcttgatttgtcgatttacatgatttct 228174  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaa 354  Q
    ||||| ||| ||  | ||||| | | | ||  ||||||||| ||||||  |||||||||||||||  |||||||| |||  |||||||||||||||    
T  228175 cactataaa-acatacaacacttttagggttgcatgatttatgataaaaatgaattacaacgactcgaatgaaaacaatttaaaatgttccacaaa 228269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 361
Target Start/End: Original strand, 11587 - 11789
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||||| || || |||||| ||||||| |||||| || | || ||  |||||  || ||||||||||||||   |||||||||||||||     
T  11587 ttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtcttgttttgtcgatttacatgatttcg 11686  T
Q  259 cactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccat 358  Q
     ||  ||||||||||||||||| ||| |||  |||||||||||| |||  ||||||||||||| | |||||||||  |||||||| ||||  |||| |||    
T  11687 tacggaaaagactcaaaacacccatgtagttgcatgatttaggacaaaactgaattacaacgattcaaatgaaaactatacaaaaagttcatcaaatcat 11786  T
Q  359 tga 361  Q
    |||    
T  11787 tga 11789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 58934 - 58768
Alignment:
Q  196 cttcaatattgatatacttgatcctccacgtgatgtcttgttttactga-tttacatgatttctcactaaaaagactcaaaacacctatggagtctcatg 294  Q
    ||||||| || |||| || |||||| || |||||||| ||||||||  | |||||||||||||||||||||||||||  ||| || ||  ||||  ||||    
T  58934 cttcaatcttcatattctcgatccttcatgtgatgtcctgttttacccaatttacatgatttctcactaaaaagacttgaaaaacataaagagttgcatg 58835  T
Q  295 atttaggataaacgtgaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||| ||||||||| || ||||||| |||   |||||||| ||||||||| ||||| |||||||||||    
T  58834 attcaggataaacctggattacaatgacccgaatgaaaacaatacaaaaagttcctcaaaccattga 58768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 361
Target Start/End: Original strand, 13012 - 13163
Alignment:
Q  211 acttgatcctccacgtgatgtcttgttttactgatttacatgatttctcacta-aaaagactcaaaacacctatggagtctcatgatttaggataaacgt 309  Q
    |||||||||| || ||||||||||| |||   ||||||||||||| ||||||| |||| ||||||||||||| ||||||  ||| |||||||||||| ||    
T  13012 acttgatccttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaacacctgtggagttgcataatttaggataaaagt 13111  T
Q  310 gaattacaacgactaaaatgaaaataatacaaaatgttccacaaaccattga 361  Q
    ||||| |||| |||    || ||| ||||||| ||  |||||||||||||||    
T  13112 gaattccaacaactcgtgtggaaagaatacaatataatccacaaaccattga 13163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 8228 - 8269
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||  ||||||||||||||||||||    
T  8228 aaaacaatagaaaaacatacactagagagaacaagaggagga 8269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 11258 - 11299
Alignment:
Q  19 aaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||| |||||||||||||||  ||||||||||||||||||||    
T  11258 aaaacaatagaaaaacatacactagagagaacaagaggagga 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 2033 - 1892
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||| |||  |||||| |||||||| |||||||| || ||||  |  ||||| |||||||||||||| |||  ||||||||| |||||||    
T  2033 ttgtattttcttcataaaacttctaacaaccattg-tcttcaatcttcatatcgtcaatccttcacgtgatgtcttgatttgttgatttacaggatttct 1935  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttag 300  Q
    ||||| ||||  |||||||||||||||||||  ||||||||||    
T  1934 cactacaaaactctcaaaacacctatggagttgcatgatttag 1892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 3774 - 3722
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||||||||||||| ||| |  ||||||||||||||||||||    
T  3774 gacatcattacaaaataatagaaaatcattctctagagagaacaagaggagga 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 12469 - 12328
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||||| |||  |||||| |||||||| ||||| || || ||||  |  ||||| |||||||||||||| |||   ||||||||||||||||    
T  12469 ttgtattttcttcataaaacttctaacaaccattg-tcttcgatcttcatatcgtcaatccttcacgtgatgtcttgatttgtcgatttacatgatttct 12371  T
Q  259 cacta-aaaagactcaaaacacctatggagtctcatgatttag 300  Q
    ||||| |||| ||||||||||||||||||||  ||||||||||    
T  12370 cactacaaaacactcaaaacacctatggagttgcatgatttag 12328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 12907 - 12855
Alignment:
Q  8 gacatcatcataaaataatagaaaaacataccatagagagaacaagaggagga 60  Q
    |||||||| | |||||||||||||| ||| |  ||||||||||||||||||||    
T  12907 gacatcattacaaaataatagaaaatcattctctagagagaacaagaggagga 12855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 447149 - 447072
Alignment:
Q  212 cttgatcctccacgtgatgtcttgttttactgatttacatgatttctcac-taaaaagactcaaaacacctatggagt 288  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||| ||||| | |||| ||||||||| ||||||||||    
T  447149 cttgatccttcacatgatgtcttgatttaatgatttacatgattcctcacttcaaaacactcaaaacgcctatggagt 447072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 343
Target Start/End: Original strand, 1780 - 1907
Alignment:
Q  216 atcctccacgtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaatta 315  Q
    ||||| ||| |||| ||||||||| |  |||| ||||||||||||||||||||| |||||  |||||   |||  ||| ||||||||||||  |  ||||    
T  1780 atccttcacatgatctcttgttttgccaatttccatgatttctcactaaaaagattcaaataacctacaaagttgcataatttaggataaaactagatta 1879  T
Q  316 caacgactaaaatgaaaataatacaaaa 343  Q
    ||| ||||| |||||||| |||||||||    
T  1880 caatgactagaatgaaaacaatacaaaa 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 1602 - 1473
Alignment:
Q  225 gtgatgtcttgttttactgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacgtgaattacaacgacta 324  Q
    ||||| || |||||| | |||||||||||||| |||  |||||||||| ||||| || | ||||  ||||||| | |||||| |||||||| || || |     
T  1602 gtgatttcatgtttttccgatttacatgatttttcataaaaaagactcgaaacatcttttgagttgcatgattaatgataaaagtgaattaaaatgaatc 1503  T
Q  325 aaatgaaaataatacaaaatgttccacaaa 354  Q
     |||||||| ||||||||||| ||| ||||    
T  1502 gaatgaaaacaatacaaaatgctcctcaaa 1473  T

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Target: scaffold0282 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 22477 - 22584
Alignment:
Q  133 ggaacttgagatgaatttttcccgacttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtc 232  Q
    ||||||||| |||||||||   |  |||||||| |||| |||||| ||||| |||||||||| ||||| | || |||| |||||| || |||||||||||    
T  22477 ggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttctatgaaccattga-cttcattcttcatatccttgattcttcacgtgatgtc 22575  T
Q  233 ttgttttac 241  Q
    ||| |||||    
T  22576 ttgatttac 22584  T

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Target: scaffold0650 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 5659 - 5762
Alignment:
Q  159 ttgtattatcttcaaaaactttctaagaaccattgatcttcaatattgatatacttgatcctccacgtgatgtcttgttttactgatttacatgatttct 258  Q
    ||||||| |||| ||| || ||||||||||||||||  |||||| || |||| || |||||| || ||||||||||  |||    |||||||||||||||    
T  5659 ttgtattttctttaaagaccttctaagaaccattga-attcaatcttcatatcctcgatccttcatgtgatgtctttatttgtcaatttacatgatttct 5757  T
Q  259 cacta 263  Q
    |||||    
T  5758 cacta 5762  T

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