View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9287_low_31 (Length: 329)
Name: NF9287_low_31
Description: NF9287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9287_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 36277314 - 36277004
Alignment:
| Q |
1 |
agacagacagtgatgaaaataccaacatcaagagatctctttaacacaaggaaatttgcacaagacaatgacctcgggcctcctgtggctgctgnnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36277314 |
agacagacagtgatgaaaataccaacatcaagagatctctttaacacaaagaaatttgcacaagacaatgacctcgggcctcctgtggctgctgtttttt |
36277215 |
T |
|
| Q |
101 |
ncaatgcacaaagagaaacagctgccagaagacgttgaaattgattaaaaccataaactaaaagtgattgtacgtgctaatgctatttatagctaaagtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36277214 |
tcaatgcacaaagagaaacagctgccagaagacgttgaaattgattaaaaccataaactaaaagtgattgtacgtgctaatgctatttatagctaaagtt |
36277115 |
T |
|
| Q |
201 |
gcacaaaataagtttagctattaagggtgttttttggagggggacactttcttcaaagttgcagtcttgctttcataatcgtgctcttatagtttggttt |
300 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36277114 |
gcacaaaataagtttagctatttagggtgttttttggagggggacactttcttcaaagttgcagtcttgctttcataattgtgctcttatagtttggttt |
36277015 |
T |
|
| Q |
301 |
ttgtcctagtt |
311 |
Q |
| |
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||||||||||| |
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| T |
36277014 |
ttgtcctagtt |
36277004 |
T |
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