View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9287_low_35 (Length: 304)

Name: NF9287_low_35
Description: NF9287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9287_low_35
NF9287_low_35
[»] chr4 (15 HSPs)
chr4 (1-304)||(4009868-4010171)
chr4 (1-301)||(4025101-4025401)
chr4 (1-304)||(4002171-4002474)
chr4 (1-304)||(3801458-3801761)
chr4 (1-304)||(4218515-4218818)
chr4 (1-256)||(3954373-3954611)
chr4 (17-304)||(3986867-3987154)
chr4 (1-252)||(3809940-3810191)
chr4 (1-96)||(3817664-3817759)
chr4 (1-96)||(3919705-3919800)
chr4 (1-96)||(3932929-3933024)
chr4 (227-304)||(3817468-3817545)
chr4 (227-304)||(3919919-3919996)
chr4 (227-304)||(3933143-3933220)
chr4 (251-304)||(3955693-3955746)
[»] chr5 (1 HSPs)
chr5 (1-304)||(13397822-13398125)
[»] scaffold1360 (1 HSPs)
scaffold1360 (1-44)||(1924-1967)
[»] chr8 (5 HSPs)
chr8 (215-255)||(7092861-7092901)
chr8 (227-258)||(7036514-7036545)
chr8 (211-255)||(7012932-7012976)
chr8 (227-255)||(7023416-7023444)
chr8 (227-255)||(7075420-7075448)


Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 4010171 - 4009868
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4010171 ttggggcatgggaagtattggcaagacaactattgcaggagaaatttttaaccaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 4010072  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4010071 gagcaattaggaagacatggaagaacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 4009972  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  4009971 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaggtcagctagagatgttatttagaactcttgattg 4009872  T
Q  301 gttt 304  Q
    ||||    
T  4009871 gttt 4009868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 4025401 - 4025101
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||     
T  4025401 ttggggtatgggaggtattggcaagacaactattgccgaagaaatttttaaacaaaattgctctgaatatgaaggttgttgttttttggcaaaggtaagt 4025302  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||    
T  4025301 gaagaattaggaagacatggaataacatttttgaaagaaaaacttttttctagactattagcagaagatgtgaaaatcgattcaccaaatgggttgtcta 4025202  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
     ||||| || |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  4025201 gttatattgagagaaggattggccgtatgaaggtccttattgttcttgatgacgttaaggaagaaggtcagatagagatgttatttggaacacttgattg 4025102  T
Q  301 g 301  Q
    |    
T  4025101 g 4025101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 4002474 - 4002171
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||||||||||||||||||||||||||| | |||| ||||||||  || |||||||||||||||||||| |||||||||||||||||||||     
T  4002474 ttggggtatgggaggtattggcaagacaactattgctgaagaagtttttaaccgaagttgctctgaatatgaaggtttttgttttttggaaaaggtaagt 4002375  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    ||  ||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||   ||| ||||||||| ||||||    
T  4002374 gaagaatcaggaaggcatggaataacatttttaaaagaaaagcttttttctacactattagcagaagatgtgaaaattaattcaccaaatgggctgtcta 4002275  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
    |||||| |  ||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  4002274 attatattcagaggatgattggccgtatgaaggttcttattgttcttgatgatgttaaggaagaaggtcaaatagagatgttatttggaactcttgattg 4002175  T
Q  301 gttt 304  Q
    ||||    
T  4002174 gttt 4002171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 3801761 - 3801458
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||| |||||| ||||| ||| ||||||||| |||||||||||| ||  ||| || ||     
T  3801761 ttggggtatgggcggtattggcaagacaactattgcagaagaaatatttaaccaaaatcgctttgaatatgatggttgttgttttatgtcaaatgtgagt 3801662  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
      | |||||||||| | |||||||||| |||  |||||||| ||||||||||  ||||||   |||||||||||||||  ||| ||||||||||||||||    
T  3801661 ttggaattaggaaggcgtggaataacaatttaaaaagaaaagcttttttctaacctattaaatgaagatgtgaaaatcgattcaccaaatgggttgtcta 3801562  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
    || ||| |   ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  3801561 ataatattcatagaaggattggccgtatgaaggttcttattgatcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattg 3801462  T
Q  301 gttt 304  Q
    ||||    
T  3801461 gttt 3801458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 4218818 - 4218515
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||| ||||||||||||||||||||||||  |||| | ||| || ||| ||| ||||||||||| |||||||||||| ||  ||| || ||     
T  4218818 ttggggtatgggcggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgttttatgtcaaatgtgagt 4218719  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
      |  ||||  ||| | ||||||||||||||| |||||||  ||||||||||  ||||||   |||||||||||||||  |||  |||||||||||||||    
T  4218718 ttgggattacaaagtcgtggaataacatttttaaaagaaatgcttttttctaacctattaaatgaagatgtgaaaatcgattcatcaaatgggttgtcta 4218619  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
    || ||| |   ||||||||||  |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4218618 ataatattcatagaaggattgaccgtatgaaggttcttattgttcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattg 4218519  T
Q  301 gttt 304  Q
    ||||    
T  4218518 gttt 4218515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 3954373 - 3954611
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||||||||||||||||||||||||||| | |||| ||| ||||  || |||||||||||||||||||||||||||||||| |||||| ||     
T  3954373 ttggggtatgggaggtattggcaagacaactattgctgaagaagtttataaccgaagttgctctgaatatgaaggttgttgttttttggcaaaggtgagt 3954472  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    ||  |||||||||| || |||| | |                 ||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  3954473 gacgaattaggaaggcacggaacagc-----------------ttttttcaacactattagcagaagatgtgaaaatcgattcaccaaatgggttgtcta 3954555  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgtt 256  Q
    || ||| |  |||||||||||| |||||||||||||||||||||||||||||||||    
T  3954556 ataatattcagagaaggattggccgtatgaaggttcttattgttcttgatgatgtt 3954611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 304
Target Start/End: Complemental strand, 3987154 - 3986867
Alignment:
Q  17 attggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagcgagcaattaggaagac 116  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||| || ||  | |||  |  ||    
T  3987154 attggcaagacaactattgcagaagaaatttttaaccaaaatcgctctgaatatgatggttgttgttttttggcaaaggtgagtgaaaagttaaaattac 3987055  T
Q  117 atggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtctaattatactgtgagaag 216  Q
    ||||||||  || ||| |||||||  |||||| ||| | |||| || ||||||||||||||   | | |||||| ||||||| | | ||| || |||| |    
T  3987054 atggaatagaatctttaaaagaaaccctttttactaaaatattggccgaagatgtgaaaattgatacaccaaataggttgtccagtgatattgagagacg 3986955  T
Q  217 gattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggttt 304  Q
     ||||| || ||||||||||||||  ||||||||||||||||||| |||  |||||||||||||||||| | ||||||||| ||||||    
T  3986954 aattggacgcatgaaggttcttatcattcttgatgatgttaaggacgaagatcagctagagatgttattcgaaactcttgactggttt 3986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 3810191 - 3809940
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| ||||| ||||||||||||||||||||||||  |||| | ||| || ||| ||| ||||||||||| ||||||||||| ||||||||||||||     
T  3810191 ttggggtatgggtggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgtttcttggaaaaggtaagt 3810092  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    ||  | |||  ||||||||||||    | ||| ||| | ||||||||||||| |||||| |||||||||||||||||   | | |||||| ||||| |||    
T  3810091 gaagagttaacaagacatggaatggattctttaaaaaataaacttttttctaaactattggcagaagatgtgaaaattgatacaccaaattggttgccta 3809992  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatga 252  Q
     | ||| || |||  ||||||| || |||||||||||||| |||||||||||    
T  3809991 gtgatattgagaggcggattggccgcatgaaggttcttatcgttcttgatga 3809940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3817759 - 3817664
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt 96  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||| | ||||| | || || ||||| ||||||||||| |||||||||||    
T  3817759 ttggggcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt 3817664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3919705 - 3919800
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt 96  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||| | ||||| | || || ||||| ||||||||||| |||||||||||    
T  3919705 ttggggcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt 3919800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3932929 - 3933024
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggt 96  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||| | ||||| | || || ||||| ||||||||||| |||||||||||    
T  3932929 ttggggcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgtttcttggaaaaggt 3933024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 3817545 - 3817468
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgttaaggaagaaag-tcagctagagatgttatttggaactcttgattggttt 304  Q
    |||||||||||||| |||||||||||||| ||||| || || |||||| ||||||||||||||||||||||||||||||    
T  3817545 atgaaggttcttatcgttcttgatgatgtcaagga-gacagatcagctcgagatgttatttggaactcttgattggttt 3817468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 3919919 - 3919996
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgttaaggaagaaag-tcagctagagatgttatttggaactcttgattggttt 304  Q
    |||||||||||||| |||||||||||||| ||||| || || |||||| ||||||||||||||||||||||||||||||    
T  3919919 atgaaggttcttatcgttcttgatgatgtcaagga-gacagatcagctcgagatgttatttggaactcttgattggttt 3919996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 3933143 - 3933220
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggttt 304  Q
    ||||| ||||||||||||||||||||||| || |||  |  || ||||||||||||||||||| ||||||||||||||    
T  3933143 atgaaagttcttattgttcttgatgatgtcaatgaaacagatctgctagagatgttatttggatctcttgattggttt 3933220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 3955693 - 3955746
Alignment:
Q  251 gatgttaaggaagaaagtcagctagagatgttatttggaactcttgattggttt 304  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  3955693 gatgttaaggaagaaaatcaactagagattttatttggaactcttgattggttt 3955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 13398125 - 13397822
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaatttttaactaaaattgctctgaatatgaaggttgttgttttttggaaaaggtaagc 100  Q
    |||||| |||||||||||||| |||||||||||||| | ||||||||||||  ||| ||| |||||||||||||| ||||||||||||| |||||| ||     
T  13398125 ttggggtatgggaggtattggaaagacaactattgccgaagaaatttttaatcaaatttgttctgaatatgaaggatgttgttttttggcaaaggtgagt 13398026  T
Q  101 gagcaattaggaagacatggaataacatttttgaaagaaaaacttttttctacactattagcagaagatgtgaaaatccgttcgccaaatgggttgtcta 200  Q
    ||  |||||||||| ||||||||| | ||||| |||||||| ||| ||||||||||||||||||||||||| ||||||  |||  ||||||||||| |||    
T  13398025 gaagaattaggaaggcatggaatagcgtttttaaaagaaaagcttgtttctacactattagcagaagatgtaaaaatcgattcatcaaatgggttgccta 13397926  T
Q  201 attatactgtgagaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaagtcagctagagatgttatttggaactcttgattg 300  Q
     ||||| |  |||||||||||| | |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  13397925 gttatattcagagaaggattggccatatgaaggttcttattgttcttgatgatgttacggaagaaggtcagctggagatgttatttggaactcttgattg 13397826  T
Q  301 gttt 304  Q
    ||||    
T  13397825 gttt 13397822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1924 - 1967
Alignment:
Q  1 ttggggcatgggaggtattggcaagacaactattgcaggagaaa 44  Q
    |||||||||||| ||||||||||||||||||||||||| |||||    
T  1924 ttggggcatgggcggtattggcaagacaactattgcagaagaaa 1967  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 7092901 - 7092861
Alignment:
Q  215 aggattggtcgtatgaaggttcttattgttcttgatgatgt 255  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  7092901 aggattcgtcgtatgaaggttcttattgttcttgacgatgt 7092861  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 7036514 - 7036545
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgttaa 258  Q
    ||||||||||||||||||||||||||||||||    
T  7036514 atgaaggttcttattgttcttgatgatgttaa 7036545  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 7012932 - 7012976
Alignment:
Q  211 gagaaggattggtcgtatgaaggttcttattgttcttgatgatgt 255  Q
    ||||||| || ||||||||||||||||| |||||||||| |||||    
T  7012932 gagaaggctttgtcgtatgaaggttcttgttgttcttgacgatgt 7012976  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 7023416 - 7023444
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgt 255  Q
    |||||||||||||||||||||||||||||    
T  7023416 atgaaggttcttattgttcttgatgatgt 7023444  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 7075448 - 7075420
Alignment:
Q  227 atgaaggttcttattgttcttgatgatgt 255  Q
    |||||||||||||||||||||||||||||    
T  7075448 atgaaggttcttattgttcttgatgatgt 7075420  T

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