View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9288A_low_149 (Length: 321)

Name: NF9288A_low_149
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9288A_low_149
NF9288A_low_149
[»] chr6 (24 HSPs)
chr6 (128-305)||(23027181-23027358)
chr6 (128-305)||(1648279-1648456)
chr6 (128-305)||(16381838-16382015)
chr6 (131-305)||(15077831-15078005)
chr6 (127-305)||(18572289-18572467)
chr6 (128-305)||(23996887-23997064)
chr6 (127-305)||(18837373-18837551)
chr6 (128-302)||(21927844-21928018)
chr6 (128-305)||(14624822-14624999)
chr6 (128-305)||(16098689-16098866)
chr6 (128-305)||(16233667-16233844)
chr6 (131-251)||(19865329-19865449)
chr6 (234-305)||(35275551-35275622)
chr6 (131-239)||(16962976-16963084)
chr6 (197-237)||(27566513-27566553)
chr6 (131-297)||(15459978-15460144)
chr6 (197-251)||(22078209-22078263)
chr6 (134-251)||(10468368-10468485)
chr6 (131-251)||(5838738-5838858)
chr6 (131-239)||(18407473-18407581)
chr6 (131-251)||(24365054-24365174)
chr6 (197-249)||(27330954-27331006)
chr6 (197-249)||(27391694-27391746)
chr6 (197-251)||(20636820-20636874)
[»] chr2 (21 HSPs)
chr2 (128-305)||(23816903-23817080)
chr2 (128-302)||(25129053-25129227)
chr2 (132-305)||(22761429-22761602)
chr2 (152-305)||(24569528-24569681)
chr2 (128-300)||(24831052-24831224)
chr2 (129-305)||(12640093-12640269)
chr2 (128-305)||(22276684-22276861)
chr2 (128-305)||(21906029-21906206)
chr2 (131-251)||(23107644-23107764)
chr2 (131-251)||(1064160-1064280)
chr2 (146-237)||(21325194-21325285)
chr2 (132-251)||(22756379-22756498)
chr2 (131-251)||(11357788-11357908)
chr2 (197-249)||(24707398-24707450)
chr2 (131-251)||(31831067-31831187)
chr2 (197-249)||(21890634-21890686)
chr2 (197-251)||(23066866-23066920)
chr2 (131-251)||(24642151-24642271)
chr2 (197-249)||(30210832-30210884)
chr2 (197-237)||(41608313-41608353)
chr2 (197-249)||(45529986-45530038)
[»] scaffold0567 (1 HSPs)
scaffold0567 (128-305)||(10100-10277)
[»] chr7 (27 HSPs)
chr7 (128-305)||(45147316-45147493)
chr7 (128-305)||(27107103-27107280)
chr7 (128-302)||(7824664-7824838)
chr7 (128-302)||(13455511-13455685)
chr7 (128-302)||(14937111-14937285)
chr7 (128-302)||(15364704-15364878)
chr7 (128-302)||(17924415-17924589)
chr7 (128-305)||(4440692-4440869)
chr7 (128-305)||(13353914-13354091)
chr7 (128-305)||(21673862-21674039)
chr7 (128-305)||(23642212-23642387)
chr7 (158-305)||(17144590-17144737)
chr7 (134-251)||(12457411-12457528)
chr7 (131-251)||(11305624-11305744)
chr7 (131-251)||(13968029-13968149)
chr7 (197-251)||(16699-16753)
chr7 (131-251)||(8211489-8211609)
chr7 (131-251)||(26117966-26118086)
chr7 (197-251)||(8708438-8708492)
chr7 (131-249)||(13666305-13666423)
chr7 (131-225)||(14285763-14285857)
chr7 (133-251)||(15154040-15154158)
chr7 (134-251)||(13022128-13022245)
chr7 (197-237)||(9596890-9596930)
chr7 (131-251)||(15101964-15102084)
chr7 (131-251)||(19147979-19148099)
chr7 (131-251)||(20747378-20747498)
[»] chr8 (30 HSPs)
chr8 (129-305)||(20652096-20652272)
chr8 (128-305)||(21196265-21196442)
chr8 (128-305)||(22316032-22316209)
chr8 (128-305)||(21850100-21850277)
chr8 (128-305)||(23156775-23156952)
chr8 (128-305)||(16876858-16877035)
chr8 (128-273)||(22983274-22983419)
chr8 (127-305)||(25282970-25283148)
chr8 (132-305)||(25283201-25283374)
chr8 (128-305)||(22283845-22284022)
chr8 (152-230)||(23901140-23901218)
chr8 (131-251)||(19978811-19978931)
chr8 (127-251)||(22366482-22366606)
chr8 (131-231)||(16407883-16407983)
chr8 (131-257)||(21251785-21251911)
chr8 (134-251)||(12305605-12305722)
chr8 (131-251)||(803490-803610)
chr8 (131-251)||(6604502-6604622)
chr8 (131-251)||(6679955-6680075)
chr8 (131-251)||(16271041-16271161)
chr8 (199-251)||(21166355-21166407)
chr8 (131-251)||(21393682-21393802)
chr8 (131-251)||(21788176-21788296)
chr8 (197-251)||(30312961-30313015)
chr8 (197-249)||(21043355-21043407)
chr8 (199-251)||(22040771-22040823)
chr8 (131-251)||(27355392-27355512)
chr8 (200-251)||(22371853-22371904)
chr8 (127-188)||(22365694-22365755)
chr8 (197-237)||(15534290-15534330)
[»] chr3 (28 HSPs)
chr3 (127-305)||(6152410-6152588)
chr3 (128-305)||(17193498-17193675)
chr3 (128-305)||(30138210-30138387)
chr3 (128-305)||(30147761-30147938)
chr3 (128-305)||(13966899-13967076)
chr3 (128-305)||(6711968-6712145)
chr3 (128-305)||(8273958-8274135)
chr3 (128-305)||(16257548-16257725)
chr3 (128-305)||(16742262-16742439)
chr3 (128-305)||(18749069-18749246)
chr3 (153-303)||(15095434-15095584)
chr3 (174-305)||(15610554-15610684)
chr3 (128-252)||(266907-267031)
chr3 (131-251)||(16371810-16371930)
chr3 (131-249)||(12498645-12498763)
chr3 (197-251)||(15062207-15062261)
chr3 (131-251)||(9523116-9523236)
chr3 (131-251)||(10384375-10384495)
chr3 (131-251)||(16491794-16491914)
chr3 (131-251)||(28754725-28754845)
chr3 (131-251)||(47124351-47124471)
chr3 (131-251)||(11960771-11960891)
chr3 (131-251)||(14876111-14876231)
chr3 (197-251)||(16692627-16692681)
chr3 (197-251)||(16806539-16806593)
chr3 (197-236)||(14126222-14126261)
chr3 (197-251)||(15209354-15209408)
chr3 (197-251)||(17490313-17490367)
[»] scaffold0692 (1 HSPs)
scaffold0692 (128-305)||(3198-3375)
[»] scaffold0225 (1 HSPs)
scaffold0225 (128-305)||(24200-24377)
[»] scaffold0076 (1 HSPs)
scaffold0076 (128-305)||(41064-41241)
[»] chr5 (20 HSPs)
chr5 (128-305)||(21936690-21936867)
chr5 (128-305)||(23504131-23504308)
chr5 (128-305)||(24581899-24582076)
chr5 (127-305)||(27011772-27011950)
chr5 (158-305)||(25243852-25243999)
chr5 (158-305)||(25308004-25308151)
chr5 (128-294)||(19566202-19566368)
chr5 (131-251)||(20342974-20343094)
chr5 (131-251)||(23574447-23574567)
chr5 (131-251)||(37542937-37543057)
chr5 (131-249)||(23440920-23441038)
chr5 (131-251)||(25848767-25848887)
chr5 (197-251)||(18776546-18776600)
chr5 (131-251)||(14886547-14886667)
chr5 (170-278)||(16065304-16065412)
chr5 (131-251)||(24797953-24798073)
chr5 (197-251)||(21881725-21881779)
chr5 (197-237)||(23517302-23517342)
chr5 (134-297)||(20822148-20822311)
chr5 (197-251)||(25423965-25424019)
[»] chr1 (12 HSPs)
chr1 (128-305)||(20830784-20830961)
chr1 (127-305)||(22134949-22135127)
chr1 (128-305)||(21201683-21201858)
chr1 (131-251)||(21951702-21951822)
chr1 (131-251)||(31539443-31539563)
chr1 (131-249)||(24099051-24099169)
chr1 (131-251)||(20295205-20295325)
chr1 (131-248)||(19855098-19855215)
chr1 (197-249)||(21749800-21749852)
chr1 (131-251)||(22361690-22361810)
chr1 (198-251)||(16078102-16078155)
chr1 (131-251)||(20835334-20835454)
[»] scaffold0008 (2 HSPs)
scaffold0008 (129-305)||(24687-24863)
scaffold0008 (137-289)||(232370-232522)
[»] scaffold0162 (1 HSPs)
scaffold0162 (127-305)||(13713-13891)
[»] scaffold0589 (1 HSPs)
scaffold0589 (128-305)||(9792-9969)
[»] scaffold0808 (1 HSPs)
scaffold0808 (131-302)||(380-551)
[»] scaffold0066 (1 HSPs)
scaffold0066 (127-305)||(46959-47137)
[»] scaffold0310 (1 HSPs)
scaffold0310 (128-305)||(14060-14237)
[»] scaffold0302 (1 HSPs)
scaffold0302 (128-305)||(5981-6158)
[»] scaffold0207 (1 HSPs)
scaffold0207 (128-305)||(18853-19030)
[»] scaffold0077 (2 HSPs)
scaffold0077 (128-305)||(27589-27766)
scaffold0077 (131-251)||(20818-20938)
[»] scaffold0028 (1 HSPs)
scaffold0028 (128-305)||(105896-106073)
[»] scaffold0266 (1 HSPs)
scaffold0266 (127-302)||(9187-9362)
[»] scaffold0117 (1 HSPs)
scaffold0117 (127-305)||(747-925)
[»] scaffold0021 (3 HSPs)
scaffold0021 (131-305)||(24772-24945)
scaffold0021 (128-305)||(71995-72172)
scaffold0021 (152-305)||(32736-32889)
[»] chr4 (18 HSPs)
chr4 (127-305)||(9291609-9291787)
chr4 (127-305)||(14998090-14998268)
chr4 (128-305)||(15292478-15292655)
chr4 (127-305)||(13248419-13248597)
chr4 (133-305)||(12342185-12342356)
chr4 (158-305)||(16028916-16029063)
chr4 (19-134)||(28497885-28497988)
chr4 (144-249)||(38811698-38811803)
chr4 (134-251)||(20891763-20891880)
chr4 (131-251)||(11206605-11206725)
chr4 (131-251)||(3264168-3264288)
chr4 (131-235)||(15147015-15147119)
chr4 (131-251)||(18226560-18226680)
chr4 (200-251)||(15078482-15078533)
chr4 (131-231)||(16354579-16354679)
chr4 (131-251)||(33223701-33223821)
chr4 (131-237)||(14691680-14691786)
chr4 (197-250)||(12524520-12524573)
[»] scaffold0047 (1 HSPs)
scaffold0047 (128-305)||(455-632)
[»] scaffold0327 (1 HSPs)
scaffold0327 (130-305)||(7977-8152)
[»] scaffold0218 (1 HSPs)
scaffold0218 (127-305)||(3267-3445)
[»] scaffold0369 (1 HSPs)
scaffold0369 (128-305)||(268-445)
[»] scaffold0554 (1 HSPs)
scaffold0554 (130-305)||(3966-4141)
[»] scaffold0132 (2 HSPs)
scaffold0132 (127-305)||(15461-15639)
scaffold0132 (128-192)||(44344-44408)
[»] scaffold0610 (1 HSPs)
scaffold0610 (128-305)||(8213-8390)
[»] scaffold0876 (1 HSPs)
scaffold0876 (130-305)||(3350-3525)
[»] scaffold0023 (2 HSPs)
scaffold0023 (127-305)||(55223-55401)
scaffold0023 (131-251)||(28749-28869)
[»] scaffold0160 (1 HSPs)
scaffold0160 (128-305)||(8071-8248)
[»] scaffold0011 (1 HSPs)
scaffold0011 (152-289)||(180754-180891)
[»] scaffold0243 (1 HSPs)
scaffold0243 (127-305)||(295-470)
[»] scaffold0124 (1 HSPs)
scaffold0124 (153-305)||(7131-7283)
[»] scaffold0235 (1 HSPs)
scaffold0235 (127-305)||(26611-26789)
[»] scaffold0058 (2 HSPs)
scaffold0058 (170-305)||(75406-75541)
scaffold0058 (131-251)||(19929-20049)
[»] scaffold0091 (1 HSPs)
scaffold0091 (152-243)||(45327-45418)
[»] scaffold0205 (1 HSPs)
scaffold0205 (131-305)||(9390-9564)
[»] scaffold0120 (1 HSPs)
scaffold0120 (228-305)||(23082-23159)
[»] scaffold0387 (1 HSPs)
scaffold0387 (128-212)||(14944-15028)
[»] scaffold0042 (1 HSPs)
scaffold0042 (131-237)||(39211-39317)
[»] scaffold0501 (1 HSPs)
scaffold0501 (131-251)||(3003-3123)
[»] scaffold0198 (1 HSPs)
scaffold0198 (131-251)||(24307-24427)
[»] scaffold0106 (1 HSPs)
scaffold0106 (131-251)||(14848-14968)
[»] scaffold0081 (2 HSPs)
scaffold0081 (131-251)||(19411-19531)
scaffold0081 (131-251)||(34835-34955)
[»] scaffold0031 (1 HSPs)
scaffold0031 (131-251)||(63408-63528)
[»] scaffold0020 (2 HSPs)
scaffold0020 (131-251)||(181008-181128)
scaffold0020 (131-251)||(100929-101049)
[»] scaffold0017 (1 HSPs)
scaffold0017 (197-251)||(196855-196909)
[»] scaffold0676 (1 HSPs)
scaffold0676 (131-251)||(6823-6943)
[»] scaffold0010 (1 HSPs)
scaffold0010 (131-251)||(41710-41830)
[»] scaffold0005 (1 HSPs)
scaffold0005 (197-237)||(278221-278261)
[»] scaffold0403 (1 HSPs)
scaffold0403 (131-249)||(7181-7299)
[»] scaffold0324 (1 HSPs)
scaffold0324 (197-250)||(19380-19433)
[»] scaffold0507 (1 HSPs)
scaffold0507 (131-251)||(9779-9899)
[»] scaffold0375 (1 HSPs)
scaffold0375 (131-239)||(3203-3311)
[»] scaffold0358 (1 HSPs)
scaffold0358 (131-251)||(6858-6978)
[»] scaffold0293 (1 HSPs)
scaffold0293 (131-251)||(13277-13397)
[»] scaffold0228 (1 HSPs)
scaffold0228 (197-305)||(571-679)
[»] scaffold0012 (1 HSPs)
scaffold0012 (197-249)||(229918-229970)
[»] scaffold0093 (1 HSPs)
scaffold0093 (134-249)||(27073-27188)
[»] scaffold0546 (1 HSPs)
scaffold0546 (197-251)||(3782-3836)
[»] scaffold0540 (1 HSPs)
scaffold0540 (197-251)||(7708-7762)
[»] scaffold0109 (2 HSPs)
scaffold0109 (197-251)||(9471-9525)
scaffold0109 (131-251)||(32950-33070)
[»] scaffold0044 (1 HSPs)
scaffold0044 (197-251)||(15235-15289)
[»] scaffold0026 (1 HSPs)
scaffold0026 (197-254)||(29820-29877)
[»] scaffold0079 (1 HSPs)
scaffold0079 (131-231)||(25783-25883)
[»] scaffold2094 (1 HSPs)
scaffold2094 (200-251)||(439-490)
[»] scaffold1355 (1 HSPs)
scaffold1355 (131-250)||(1485-1604)
[»] scaffold0220 (1 HSPs)
scaffold0220 (146-237)||(214-305)
[»] scaffold0111 (1 HSPs)
scaffold0111 (128-183)||(3364-3419)
[»] scaffold1602 (1 HSPs)
scaffold1602 (197-251)||(1444-1498)
[»] scaffold0621 (1 HSPs)
scaffold0621 (197-251)||(2342-2396)
[»] scaffold0483 (1 HSPs)
scaffold0483 (131-237)||(12303-12409)
[»] scaffold0333 (1 HSPs)
scaffold0333 (197-251)||(16530-16584)
[»] scaffold0284 (1 HSPs)
scaffold0284 (197-251)||(22742-22796)
[»] scaffold0067 (3 HSPs)
scaffold0067 (131-249)||(51559-51677)
scaffold0067 (131-249)||(60593-60711)
scaffold0067 (131-249)||(66981-67099)
[»] scaffold0001 (1 HSPs)
scaffold0001 (197-251)||(390577-390631)
[»] scaffold0190 (1 HSPs)
scaffold0190 (134-251)||(32696-32813)
[»] scaffold0145 (1 HSPs)
scaffold0145 (197-250)||(39389-39442)
[»] scaffold0396 (1 HSPs)
scaffold0396 (131-251)||(4840-4960)


Alignment Details
Target: chr6 (Bit Score: 146; Significance: 7e-77; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 23027358 - 23027181
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23027358 ccaacaaaatccataaagatactatcccacttccactccggcacaaacaacggttgcatcaaacccgacgatttctgatgttcaatcttcgacttctgac 23027259  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23027258 aaaccaaacaagcataaacaaactctgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 23027181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 1648456 - 1648279
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  1648456 ccaacaaaatccatagaaatgctatcccatttccactctggcacaaacaacggttgcatcaaacccaacggtctctgatgttcaatcttcgatttctgac 1648357  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  1648356 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 1648279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 16382015 - 16381838
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  16382015 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 16381916  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  16381915 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 16381838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 131 - 305
Target Start/End: Complemental strand, 15078005 - 15077831
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  15078005 acaaaatccatagagatactatcccacttccactctggcacaaacaacagttgcatcaaacccgacagtttctggtgttcaatcttcgacttttgacaaa 15077906  T
Q  231 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||| |||||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  15077905 ccaaacaagcatatacaaactcagcaatttccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 15077831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 18572289 - 18572467
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || || || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  18572289 cccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctga 18572388  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  18572389 caaaccaaacaagcataaacaaactcagtaatctccttcttaattccaggccacaaaaacaacctcttcaaatcctgat 18572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 23996887 - 23997064
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||| ||||||||| | || || |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  23996887 ccaacgaaatccatagaaatgctatcccatttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 23996986  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| || ||||| ||||    
T  23996987 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttaaaatcttgat 23997064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 18837551 - 18837373
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || ||||||    
T  18837551 cccaacaaagtccatagaaatgctatcccacgtccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcattgatttctga 18837452  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  18837451 caaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaatctctttaaatcctgat 18837373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 21927844 - 21928018
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||||    
T  21927844 ccaacaaagtccatagagatactatcccacttccactctggcacaaacaacggttgcatcaaactcaacggtctctgatgttcaatcttcgacttttgac 21927943  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    |||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||| |||||||||||||||    
T  21927944 aaaccaaacaagcataaacaaattccgcgatctccttcttcattccaggccaccaaaacgacctcttcaaatcct 21928018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 14624999 - 14624822
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||| ||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  14624999 ccaacaaaatcaatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgac 14624900  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||  ||| |||||||||| |||||||||||||    
T  14624899 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccagaacaccaaaacaaccttttcaaatcctgat 14624822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 16098689 - 16098866
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | || || ||||| ||||||||| |||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  16098689 ccaacaaagtccatagaaatgctatcccacttccactctagcacgaacaacagttgcatcaaactcgacggtttctgatgttcaatcttcgacttatgac 16098788  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||| |||||||| | |||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  16098789 aaaccaaacaagcatagacaaactccgcaatttccttcttcattccgggccaccaaaacaacttcttcaaatcctgat 16098866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 16233667 - 16233844
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||  | || || ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  16233667 ccaacaaaatccatggaaatgctatcccacttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 16233766  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| |  || ||| ||||||||||||||||| |||||||||| |||||||| ||||    
T  16233767 aaaccaaacaagcataaacaaactcagcgatctccatcttcattccaggccaccaaaacaaccttttcaaatcttgat 16233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19865329 - 19865449
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  19865329 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 19865428  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  19865429 ccaaacaggaatacacaaact 19865449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 35275622 - 35275551
Alignment:
Q  234 aacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||| ||||| || | |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  35275622 aacaagcatagacaaattcagcaatttccttcttcatttcaggccaccaaaacaacctcttcaaatcctgat 35275551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 16963084 - 16962976
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||| | |||||||||   |||| |  ||||| ||| |  ||||||||||| ||||||||||||||||||||||    
T  16963084 acaaaatccatggatatactatcccatttcgattctggcacatctaacgataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaa 16962985  T
Q  231 ccaaacaag 239  Q
     ||||||||    
T  16962984 tcaaacaag 16962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 27566553 - 27566513
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27566553 ggtttctgatgttcaatcttcgacttctgacaaactaaaca 27566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 297
Target Start/End: Original strand, 15459978 - 15460144
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || |||||||||||||| || | |  |||||||  || ||| || |  || ||||||||||||||||| ||||||||||||     
T  15459978 acaaaatccatagaaatgctatcccatttccactccggtatatccaacggtgtcaacaatcctgcaggcttctgatgttcaatcttagacttctgacaag 15460077  T
Q  231 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaa 297  Q
     |||||| ||||| ||||||   |  |  |||||||||| ||||| |||| |||||||| |||||||    
T  15460078 tcaaacacgcatacacaaaccgcgcgacatccttcttcaatccagaccaccaaaacaacttcttcaa 15460144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 22078263 - 22078209
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  22078263 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 22078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 10468485 - 10468368
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||| ||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||    
T  10468485 aaatctatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtca 10468386  T
Q  234 aacaagcataaacaaact 251  Q
    |||| |||||||||||||    
T  10468385 aacatgcataaacaaact 10468368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 5838858 - 5838738
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| || ||||||   |||| |  ||||| ||| |  ||||||||||| || | |||||||||||||||||    
T  5838858 acaaaatccatggatatactatcccatttccattccggcacatctaacgataccatcataccagcaggtttctgatgctcgaccttcgacttctgacaaa 5838759  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  5838758 tcaaacaagaatacacaaact 5838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 18407581 - 18407473
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || |    ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  18407581 acaaaatccatggatatactatcccatttccactctggcacatctaaagacaccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaa 18407482  T
Q  231 ccaaacaag 239  Q
     ||||||||    
T  18407481 tcaaacaag 18407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 24365054 - 24365174
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | ||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||| |    
T  24365054 acaaaatccatagatatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaga 24365153  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||| ||||    
T  24365154 tcaaacaggcataaacgaact 24365174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 27331006 - 27330954
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27331006 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27330954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 27391746 - 27391694
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27391746 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 20636874 - 20636820
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  20636874 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 20636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 23817080 - 23816903
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23817080 ccaacaaaatccatagcgatactatcccacttccactctggcacaaacaacggttgtatcaaacctgacggtttctgatgttcaatcttcgacttctgac 23816981  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23816980 aaaccaaacaagcataaacaaactctggaatttccttcttcattccaggccactaaaacaacctcttcaaatactgat 23816903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 25129053 - 25129227
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25129053 ccaacaaagtccatagagatattatcccatttccactctggcataaacaacggttgcatcaaacccgacggtttatgatattcaatcttcgacttctgac 25129152  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  25129153 aaaccaaacaagcataaacaaactctgcaatctccttcttccttctaggccaccaaaacaacctcttcaaatcct 25129227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 132 - 305
Target Start/End: Complemental strand, 22761602 - 22761429
Alignment:
Q  132 caaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaac 231  Q
    ||||||||||| ||||  | ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22761602 caaaatccatagagatgatatcccacttccactctggcacaaacaacggttacatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaac 22761503  T
Q  232 caaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  22761502 caaagaagcataaacaaactctgcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 22761429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 152 - 305
Target Start/End: Complemental strand, 24569681 - 24569528
Alignment:
Q  152 tcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  24569681 tcccacttccactctggcacaaacaacagttgcatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaacaagcatatacaaact 24569582  T
Q  252 ctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    | | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24569581 cagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 24569528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 128 - 300
Target Start/End: Complemental strand, 24831224 - 24831052
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||| ||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24831224 ccaacgaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 24831125  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatc 300  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||    
T  24831124 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatc 24831052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 129 - 305
Target Start/End: Complemental strand, 12640269 - 12640093
Alignment:
Q  129 caacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 228  Q
    |||||||||||||| | || || ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  12640269 caacaaaatccatagaaatgctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgaca 12640170  T
Q  229 aaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||| |||| |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12640169 aaccaagcaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 12640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 22276684 - 22276861
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  22276684 ccaacaaaatccatagaaatgctatcccatttccattttggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttctatttctgac 22276783  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  22276784 aaaccaaacaagcataaacaaactcagcaatctccttcttcattttaggccaccaaaacaacctcttcaaatcttgat 22276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21906206 - 21906029
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||||| |||| | ||||| || || |||||||| || |||||||||||||||||||| |  ||||||||||||||| ||||||| ||||||||||    
T  21906206 ccaacaaaattcatagatatactatcacacttccactccggtacaaacaacggttgcatcaagcttgacggtttctgatgtccaatcttagacttctgac 21906107  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||| ||||||||| ||||| |  |  || ||||||||| |||||||| || ||||||||||||| ||||||||||    
T  21906106 aaaccacacaagcatacacaaattgagctatatccttcttcgttccaggcgaccaaaacaacctctttaaatcctgat 21906029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 23107764 - 23107644
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  23107764 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 23107665  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  23107664 ccaaacaggaatacacaaact 23107644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 1064160 - 1064280
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  1064160 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 1064259  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| |||||||||||||    
T  1064260 ccaaacaggcataaacaaact 1064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 21325285 - 21325194
Alignment:
Q  146 atactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  21325285 atactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaactaaaca 21325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 22756498 - 22756379
Alignment:
Q  132 caaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaac 231  Q
    ||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||  |  |||||||||||||||||||||||||||| ||||||    
T  22756498 caaaatccatggatatactatcccatttccactctggcacatctaaagataccatcatactagcaggtttctgatgttcaatcttcgacttcttacaaac 22756399  T
Q  232 caaacaagcataaacaaact 251  Q
    |||||| | ||| |||||||    
T  22756398 caaacaggaatacacaaact 22756379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 11357908 - 11357788
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||| ||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11357908 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgccaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11357809  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  11357808 tcaaacaggcataaacaaact 11357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 24707450 - 24707398
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  24707450 ggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaa 24707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 31831067 - 31831187
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  31831067 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaaa 31831166  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  31831167 tcaaacatgcataaacaaact 31831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 21890686 - 21890634
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||    
T  21890686 ggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 23066866 - 23066920
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||| |||||||    
T  23066866 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaact 23066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 24642151 - 24642271
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || ||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  24642151 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgccaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 24642250  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  24642251 tcaaacatgcatagacaaact 24642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 30210884 - 30210832
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  30210884 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 30210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 41608353 - 41608313
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  41608353 ggtttctgatgttcaactttcgacttctgacaaactaaaca 41608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 45529986 - 45530038
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  45529986 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 45530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 10100 - 10277
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  10100 ccaacaaaatccatagagatactatcccacttccacactggcacaaacaacggttgcatcaaaccctacggtttctgatgttcaatcttcgatttctgac 10199  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||| ||||  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  10200 aaaccaaacaagcataaacaaattctgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 10277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 45147316 - 45147493
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45147316 ccaacaaagtccatagagatgttatcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 45147415  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45147416 aaaccaaacaagcataaacaaattccgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 45147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 27107280 - 27107103
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  27107280 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 27107181  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  27107180 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 27107103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 7824664 - 7824838
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | ||  | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7824664 ccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 7824763  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  7824764 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcct 7824838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 13455511 - 13455685
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| || |||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  13455511 ccaacaaaatccatagagatactatctcatttccattctggaacaaacaacggttgcatcaaacctaacggtttctgatgttcaaccttcgacttctgac 13455610  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||| ||||||||||||||||| | ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  13455611 aaaccaagcaagcataaacaaactcagcaatctccttcttcattccaggccaccataacaacctcttcaaatcct 13455685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 14937111 - 14937285
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| || | || ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14937111 ccaacaaagtccatagagttgctatcccacttccactgtggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgac 14937210  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  14937211 aaaccaaactagcataaacaaactctgcaatttcgttcttcattctaggccaccaaaacaacctcttcaaatcct 14937285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 15364704 - 15364878
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| || | || ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  15364704 ccaacaaagtccatagagttgctatcccacttccactttggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgac 15364803  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  15364804 aaaccaaactagcataaacaaactctgcaatttcgttcttcattctaggccaccaaaacaacctcttcaaatcct 15364878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 17924415 - 17924589
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||||| || || || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17924415 ccaacaaagtccatagagatactatctcactttcactctggctcaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgac 17924514  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    |||| || |||||||||||||| || | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  17924515 aaacaaagcaagcataaacaaattccgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcct 17924589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 4440692 - 4440869
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||| | ||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  4440692 ccaacaaaatccatagagatattatcccacttccactctggcacaaataacggttgcatcaaaccgtacggtttctgatgttcaatcgtcgacttctgac 4440791  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||| ||||||||| ||||| ||||  || |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  4440792 aaaccatacaagcatatacaaattctgcgatctccttcttcattccagaccaccaaaacaacctctttaaatcctgat 4440869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 13353914 - 13354091
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| || ||| ||||||||| ||||||||| | ||  ||||||||||||||||||||||| || | |||||||||||||||||| ||||||| ||    
T  13353914 ccaacaaattcgatagagatactgttccatttccattatgaaacaaacaacggttgcatcaaacctgatgatttctgatgttcaatcttagacttctaac 13354013  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||||  || |||||||||||||||| |||| ||||||| ||||||||||||||||    
T  13354014 aaaccaaacaagcataaacaaactctgcgatctccttcttcattccagtccaccaaaacaatctcttcaaatcctgat 13354091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21674039 - 21673862
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||||| || || ||||||||| |||||| |||||||||||||||||| |||||| | ||||||||||||||||| |||||||    
T  21674039 ccaacaaagtccatagagatactatctcacttccactctagcacaatcaacggttgcatcaaacctgacggtctttgatgttcaatcttcgatttctgac 21673940  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||| |||||||||||||| |||| ||| || ||||||| |||||||||| |||||||| |||||||||||||||    
T  21673939 aaaccaagcaagcataaacaaattctgaaatctctttcttcagtccaggccaccaaaacaacatcttcaaatcctgat 21673862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 23642212 - 23642387
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||||| |||| | ||| | ||||| |||||||| || |||||||||||||| |||||||| ||||  |||||||||||||| || ||||| ||||    
T  23642212 ccaacaaaatacatagaaatattatcccacttccactcagggacaaacaacggttgaatcaaacctgacgacttctgatgttcaatgttagactt-tgac 23642310  T
Q  228 -aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
     ||| |||||||||||| ||||||||    || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23642311 aaaatcaaacaagcatacacaaactc--atatgtccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 23642387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 305
Target Start/End: Complemental strand, 17144737 - 17144590
Alignment:
Q  158 ttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaa 257  Q
    |||||||| || |||||||||| ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||| |||||||| |  |    
T  17144737 ttccactccggtacaaacaacgattgcatcaaacccgatggcttctgatgttaaatcttagacttttgacaaatcaaacaagcatacacaaactccgcta 17144638  T
Q  258 tttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||| | ||||||| || ||||  || ||| ||||||||||| ||||    
T  17144637 tttcccttttcattctagaccacctaagcaatctcttcaaatcttgat 17144590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 12457411 - 12457528
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||    
T  12457411 aaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtca 12457510  T
Q  234 aacaagcataaacaaact 251  Q
    ||||||||||||||||||    
T  12457511 aacaagcataaacaaact 12457528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 11305744 - 11305624
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11305744 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11305645  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  11305644 tcaaacaggcataaacaaact 11305624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 13968149 - 13968029
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| ||||| || || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  13968149 acaaaatccatagagatactgtcccacttccagtccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaacctttgacttctgacaaa 13968050  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  13968049 tcaaacaggcataaacaaact 13968029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 16753 - 16699
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16753 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 8211609 - 8211489
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| |||||||||| || |||||||| || |||   ||||||  || ||| |  |  || |||||||| |||| ||| |||||||||||||    
T  8211609 acaaaatccatagagatactgtctcacttccactccggtacatctaacggtgtcaacaaccatgcaggcttctgatgctcaaccttggacttctgacaaa 8211510  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  8211509 tcaaacaggcataaacaaact 8211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 26118086 - 26117966
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||| ||||| |||||||| || |||   ||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||| |    
T  26118086 acaaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccccgcaggcttctgatgctcaaccttggacttctgacaga 26117987  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||| ||||    
T  26117986 tcaaacaggcataaacgaact 26117966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 8708438 - 8708492
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||  ||||||||||||||||| ||||| | |||||||||||    
T  8708438 ggtttctgatgctcaactttcgacttctgacaaactaaacaggaataaacaaact 8708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 13666305 - 13666423
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || ||||| |||||||| ||||||  || ||||  || ||| || |  || ||||||||||||| ||||||||||||||||     
T  13666305 acaaaatccatagaaatgctatcccacttccactccggcacatccatcggtgtcaacaaccctgcaggcttctgatgttcaaccttcgacttctgacaag 13666404  T
Q  231 ccaaacaagcataaacaaa 249  Q
     |||||| ||||| |||||    
T  13666405 tcaaacatgcatacacaaa 13666423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 14285857 - 14285763
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 225  Q
    |||||||||||| | ||||||||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||    
T  14285857 acaaaatccatagaaatactgtcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctg 14285763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 15154158 - 15154040
Alignment:
Q  133 aaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 232  Q
    |||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  | ||||||||| ||||  |||||||||||||||| |    
T  15154158 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcagatttctgatgctcaactttcgacttctgacaaatc 15154059  T
Q  233 aaacaagcataaacaaact 251  Q
    ||||||| ||| |||||||    
T  15154058 aaacaagaatacacaaact 15154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 13022128 - 13022245
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| | || || |||||||||||||| || |||  |||||||  || ||| || |  || |||||||| ||||  || ||||||||||||  ||    
T  13022128 aaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgatcaacattagacttctgacaagtca 13022227  T
Q  234 aacaagcataaacaaact 251  Q
    ||||||||||||||||||    
T  13022228 aacaagcataaacaaact 13022245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 9596890 - 9596930
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||||| ||| ||||||||||||||||||||||| |||||    
T  9596890 ggtttctaatgctcaatcttcgacttctgacaaactaaaca 9596930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 15102084 - 15101964
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | ||  ||||||| |||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  15102084 acaaaatccatagaaatgttgtcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 15101985  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  15101984 tcaaacatgcatagacaaact 15101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19147979 - 19148099
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | || || ||||| ||||| |||||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  19147979 acaaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 19148078  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  19148079 tcaaacatgcataaacaaact 19148099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 20747378 - 20747498
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | || || ||||| ||||| |||||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  20747378 acaaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 20747477  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  20747478 tcaaacatgcataaacaaact 20747498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 129 - 305
Target Start/End: Complemental strand, 20652272 - 20652096
Alignment:
Q  129 caacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 228  Q
    ||||||| |||||| ||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20652272 caacaaagtccatagagatactatcccacttccactctagcacaaacaatggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 20652173  T
Q  229 aaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||| |||||||| |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20652172 aaccaagcaagcatacacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 20652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21196442 - 21196265
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| |||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  21196442 ccaacaaaatccatagagatactatcccacctccactatggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatttttgacttctgac 21196343  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  21196342 aaaccaaacaagcataaacaaactatgcaatttcctttttcattccaggccaccaaaacaacatcttcaaatcctgat 21196265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 22316032 - 22316209
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||||    
T  22316032 ccaacaaagtccatagagatattgtcccacttccactctggcacaaacaacggttgcatcaaactcgatgatttctaatgttcaatcttcgacttctgac 22316131  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22316132 aaaccaaacaagcataaacaaactctgtgatctccttcttcattccaggccaccaaaacaatctcttcaaatcctgat 22316209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21850277 - 21850100
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  21850277 ccaacaaaatccatagaaatgctatcccatttccactatggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 21850178  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||  ||||||||| |||||||| ||||    
T  21850177 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccgaaacaaccttttcaaatcttgat 21850100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 23156952 - 23156775
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23156952 ccaacaaaatccatagagatactatcccacttccaatctggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgac 23156853  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||| | ||||| |  | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23156852 aaaccaaacaagcaaacacaaatttcgcaatctccttcttcattccaggccacaaaaacaacctcttcaaatcctgat 23156775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 16877035 - 16876858
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  16877035 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgac 16876936  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||  ||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  16876935 aaaccaagtaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 16876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 128 - 273
Target Start/End: Original strand, 22983274 - 22983419
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  22983274 ccaacaaaatccatagagatactatcccaattccactctggcacaaacaacggttgcatcaaaccctgcggtttctgatgttcaatcttcgacttctgac 22983373  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattcc 273  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||    
T  22983374 aaaccaaacaagcatatacaaactcagcaatttccttcttcattcc 22983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 25282970 - 25283148
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||||||||||||||| ||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||    
T  25282970 cccaacaaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctga 25283069  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||| ||||||||||  || |||||||||||||| |||||| |||||||| |||||||||||||||    
T  25283070 caaaccaaacaagcatacacaaactctgatatatccttcttcattcctggccaccaaaacaacttcttcaaatcctgat 25283148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 132 - 305
Target Start/End: Original strand, 25283201 - 25283374
Alignment:
Q  132 caaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaac 231  Q
    ||||||||||| ||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||    
T  25283201 caaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaac 25283300  T
Q  232 caaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||| ||||||||    || |||||||||||||| |||||| |||||||  |||||||||||||||    
T  25283301 caaacaagcatacacaaactcctatatatccttcttcattcctggccaccaaaacaatttcttcaaatcctgat 25283374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 22283845 - 22284022
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | ||| | || || |||||||| || | ||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||||    
T  22283845 ccaacaaaatccatataaatattatctcacttccactcaggaataaacaacggttgcgtcaaacccgaagacttctgatgttcaatcttagacttctgac 22283944  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    | | |||||||||||| |||||||| |  || ||||||||||||||| ||||| |||||||| |||||| ||||||||    
T  22283945 agatcaaacaagcatacacaaactcagctatatccttcttcattccatgccaccaaaacaacttcttcagatcctgat 22284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 23901140 - 23901218
Alignment:
Q  152 tcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23901140 tcccacttccaatctagcacaaacaacggttgcatcaaacccgacgatttatgatgttcaatcttcgacttctgacaaa 23901218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19978811 - 19978931
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  19978811 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 19978910  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  19978911 ccaaacaggaatacacaaact 19978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 22366606 - 22366482
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||||||||||||||  | ||||| ||||| |||||||| |||||||| || ||||||||||  || |||||  ||||||| || ||||| || ||||||    
T  22366606 cccaacaaaatccatcgaaatactatcccacttccactccggcacaaaaaatggttgcatcactcctgacggcatctgatgctcgatcttagatttctga 22366507  T
Q  227 caaaccaaacaagcataaacaaact 251  Q
    ||||||||||||||| | |||||||    
T  22366506 caaaccaaacaagcaaacacaaact 22366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 16407983 - 16407883
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||||||||||||    |||| |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  16407983 acaaaatccatggatatactatcccatttccactctggcacgtctaacgataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 16407884  T
Q  231 c 231  Q
    |    
T  16407883 c 16407883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 21251785 - 21251911
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||  ||||||||||| |||||||||   |||| |  ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  21251785 acaaaatccatggatatacgatcccatttccaatctggcacatctaacgataccatcacaccagcaggtttctgatgctcaaccttcgacttctgacaaa 21251884  T
Q  231 ccaaacaagcataaacaaactctgtaa 257  Q
     |||||||| ||| ||||||| |||||    
T  21251885 tcaaacaagaatatacaaactgtgtaa 21251911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 12305605 - 12305722
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||  |    
T  12305605 aaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgatcaaccttagacttctgacaaataa 12305704  T
Q  234 aacaagcataaacaaact 251  Q
    |||||||||||| |||||    
T  12305705 aacaagcataaaaaaact 12305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 803610 - 803490
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    ||||||||| || ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  803610 acaaaatccgtagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 803511  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| |||||||| ||||    
T  803510 ccaaacaggcataaacgaact 803490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 6604502 - 6604622
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |   | |||||||| |||| ||| |||||||||||||    
T  6604502 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcatgcttctgatgctcaaccttggacttctgacaaa 6604601  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  6604602 tcaaacaggcataaacaaact 6604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 6679955 - 6680075
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |   | |||||||| |||| ||| |||||||||||||    
T  6679955 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcatgcttctgatgctcaaccttggacttctgacaaa 6680054  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  6680055 tcaaacaggcataaacaaact 6680075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 16271161 - 16271041
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| |  |  || |||||||| |||| ||| |||||||||||||    
T  16271161 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccttgcaggcttctgatgctcaaccttggacttctgacaaa 16271062  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  16271061 tcaaacaggcataaacaaact 16271041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 21166407 - 21166355
Alignment:
Q  199 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  21166407 tttctgatgttcaatcttcgacttctgataaaccaaacaggaatacacaaact 21166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 21393802 - 21393682
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| ||||    
T  21393802 acaaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaa 21393703  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||||||| |||||||    
T  21393702 tcaaacaagcatacacaaact 21393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 21788296 - 21788176
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| ||||    
T  21788296 acaaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaa 21788197  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||||||| |||||||    
T  21788196 tcaaacaagcatacacaaact 21788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 30313015 - 30312961
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  30313015 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaact 30312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 21043355 - 21043407
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| ||| |||||    
T  21043355 ggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaa 21043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 22040771 - 22040823
Alignment:
Q  199 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  22040771 tttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 22040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 27355392 - 27355512
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| ||||||||  | |||   ||||||  ||  || || |  || |||||||| |||| ||| |||||||||||||    
T  27355392 acaaaatccatagagatactgtcccacttccactccagtacatctaacggtgtcaaaaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 27355491  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  27355492 tcaaacaggcataaacaaact 27355512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 22371853 - 22371904
Alignment:
Q  200 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||||| ||| ||||||||||||  |||||| |||||||||||||    
T  22371853 ttctgatgttcaaccttagacttctgacaagtcaaacatgcataaacaaact 22371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 22365755 - 22365694
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatca 188  Q
    |||||||||||||||  | ||| | ||||| |||||||| ||||||||||| ||||||||||    
T  22365755 cccaacaaaatccatcgaaatattatcccacttccactccggcacaaacaatggttgcatca 22365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 15534290 - 15534330
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  15534290 ggtttctgatgctcaatctttgacttctgacaaactaaaca 15534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 6e-68; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 6152588 - 6152410
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||||||||||||||| ||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6152588 cccaacaaaatccatagagatactatcccacttccactcaagcacaaacaacggttgcatcaaacccgacggtctttgatgttcaatcttcgacttctga 6152489  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6152488 caaactaaacaaacataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 6152410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 17193498 - 17193675
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17193498 ccaacaaaatccatagagatactatcccacttccactctggcacaaacaacatttgcatcaaacccgatggtttctgatgttcaatcttcgacttctgac 17193597  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  17193598 aaatcaaacaagcataaacaaactctgcaatttccttgttcattccaagccaccaaaacaacctcttcaaattctgat 17193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 30138210 - 30138387
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  30138210 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 30138309  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  30138310 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 30138387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 30147761 - 30147938
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  30147761 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 30147860  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  30147861 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 30147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 13967076 - 13966899
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||    
T  13967076 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgac 13966977  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13966976 aaaccaaacaagcataaacaaactcagcgatttccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 13966899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 6712145 - 6711968
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||  ||||| | ||||| |||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  6712145 ccaacaaagtccattgagatattatcccacttccactctggcacaaacaacaattgcatcaaacccgacgatttctgatgttcaatcttagacttctgac 6712046  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6712045 aaaccaaacaagcataaacaaattccgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 6711968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 8274135 - 8273958
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||| || |||||||    
T  8274135 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaagaatggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgac 8274036  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||| |||| |||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  8274035 aaaccaagcaagaataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 8273958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 16257548 - 16257725
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | ||  | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  16257548 ccaacaaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgatcaatcttcgatttctgac 16257647  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| |   | ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  16257648 aaaccaaacaagcataaacaaactcagcggtctccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 16257725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 16742439 - 16742262
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || | ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  16742439 ccaacaaaatccatagaaatgctattccacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgac 16742340  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||| ||||| |||||||||| |||||||| ||||    
T  16742339 aaaccaaacaagcataaacaaactcagcgatctccttcttcattccaagccaccaaaacaaccttttcaaatcttgat 16742262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 18749069 - 18749246
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||| || |||||| ||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||    
T  18749069 ccaaccaagtccatagagatactatctcatttccactctggcaaaaacaacggttgcatcaaaaccgacggtttatgttgttcaatcttcgacttctaac 18749168  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||| ||||||||| || |  || |||||| |||||||||||||||||||||||||||||||||||||||    
T  18749169 aaaccaaacaagaataaacaaattccgcgatctccttcatcattccaggccactaaaacaacctcttcaaatcctgat 18749246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 153 - 303
Target Start/End: Original strand, 15095434 - 15095584
Alignment:
Q  153 cccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactc 252  Q
    |||| |||||| | |||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15095434 cccacttccacgcaggcacaaacaacggttgcatcaaacccgacgacttttgatgttcaatcttcgacttttgaaaaaccaaacaagcatacacaaactc 15095533  T
Q  253 tgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctg 303  Q
    ||  || ||||||||||||||||||||| ||||||||||||| ||||||||    
T  15095534 tgctatatccttcttcattccaggccaccaaaacaacctctttaaatcctg 15095584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 174 - 305
Target Start/End: Original strand, 15610554 - 15610684
Alignment:
Q  174 acaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttcattcc 273  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |  || ||||||||||||||    
T  15610554 acaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacagactcagcgatctccttcttcattcc 15610653  T
Q  274 aggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||  ||||||||| |||||||||||||    
T  15610654 aggccac-caaacaaccttttcaaatcctgat 15610684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 267031 - 266907
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||||| |||| | ||| | ||||| |||||||| || |||||||| ||||||||||||||| | |  || || ||||||||||||||||||||||    
T  267031 ccaacaaaattcatagaaatattatcccacttccactccggtacaaacaatggttgcatcaaacccaatgacttttggtgttcaatcttcgacttctgac 266932  T
Q  228 aaaccaaacaagcataaacaaactc 252  Q
    |||||||||||||||| ||||||||    
T  266931 aaaccaaacaagcatacacaaactc 266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 16371810 - 16371930
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  16371810 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 16371909  T
Q  231 ccaaacaagcataaacaaact 251  Q
    | ||||||| ||| |||||||    
T  16371910 ctaaacaagaatacacaaact 16371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 12498645 - 12498763
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | ||||| ||||||||||| |||||||||   |||| |  ||||| ||| |  ||||||||||||| ||||||||||||||||||||    
T  12498645 acaaaatccatagatatactatcccatttccattctggcacatctaacgataccatcataccagcaggtttctgatgtttaatcttcgacttctgacaaa 12498744  T
Q  231 ccaaacaagcataaacaaa 249  Q
    | ||||||| ||| |||||    
T  12498745 ctaaacaagaatacacaaa 12498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 15062207 - 15062261
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  15062207 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 15062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 9523116 - 9523236
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || |||  ||||| ||| |  ||||||||||| ||||  ||||||||||||||||    
T  9523116 acaaaatccatggatatactatcccatttccactctggcacatctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaa 9523215  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  9523216 tcaaacaagaatacacaaact 9523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 10384375 - 10384495
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  10384375 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaaa 10384474  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  10384475 tcaaacaggcataaacaaact 10384495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 16491914 - 16491794
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||| | |||||||||||||||||||||   |||| |  ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  16491914 acaaaatccatggatatattatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaa 16491815  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  16491814 tcaaacaagaatacacaaact 16491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 28754725 - 28754845
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  28754725 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 28754824  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  28754825 tcaaacaggcataaacaaact 28754845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 47124351 - 47124471
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  47124351 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 47124450  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  47124451 tcaaacaggcataaacaaact 47124471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 11960891 - 11960771
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | |||||||| ||||||||||| || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  11960891 acaaaatccatagaaatactgtctcatttccactccggtacatccaacggtgtcaacaatcctgcaggcttctgatgttcaactttagacttctgacaag 11960792  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  11960791 tcaaacatgcataaacaaact 11960771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 14876231 - 14876111
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||| |||||||| |||    
T  14876231 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcaacttctgataaa 14876132  T
Q  231 ccaaacaagcataaacaaact 251  Q
    | ||||| | ||| |||||||    
T  14876131 ctaaacaggaatacacaaact 14876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 16692627 - 16692681
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16692627 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 16806593 - 16806539
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16806593 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 14126261 - 14126222
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaac 236  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14126261 ggtttctgatgctcaatcttcgacttctgacaaactaaac 14126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 15209354 - 15209408
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||| |||||||||||||||| |||||| | ||| |||||||    
T  15209354 ggtttctgatgctcaattttcgacttctgacaaatcaaacaggaatacacaaact 15209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 17490313 - 17490367
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  17490313 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 17490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 3375 - 3198
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  3375 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 3276  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  3275 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 3198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 24200 - 24377
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24200 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 24299  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  24300 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 24377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 41064 - 41241
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41064 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 41163  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  41164 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 41241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21936867 - 21936690
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  21936867 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 21936768  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  21936767 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 21936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 23504131 - 23504308
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||    
T  23504131 ccaacaaaatccataaagatactatcccaattccactctggcacaaacaacagttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgac 23504230  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  23504231 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 23504308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 24581899 - 24582076
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  24581899 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgac 24581998  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||| |||||||||||||    
T  24581999 aaaccaaacaagcataaacaaactcagcaatctccttcttcattacaggccaccaaaacaaccttttcaaatcctgat 24582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 27011772 - 27011950
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || || || |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  27011772 cccaacaaagtccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacccgacgttctctgatgttcaatcttcgatttctga 27011871  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||||| |||||||||||||    
T  27011872 caaaccaaacaagcataaacaaactcagtaatctccttcttcattccagaccaccaaaacaaccttttcaaatcctgat 27011950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 305
Target Start/End: Complemental strand, 25243999 - 25243852
Alignment:
Q  158 ttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaa 257  Q
    ||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||||  | |    
T  25243999 ttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaactcattta 25243900  T
Q  258 tttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    | |||||||||| |||||||| | |||||||| |||| ||||| ||||    
T  25243899 tatccttcttcactccaggccgccaaaacaacatctttaaatcttgat 25243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 305
Target Start/End: Complemental strand, 25308151 - 25308004
Alignment:
Q  158 ttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaa 257  Q
    ||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||||  | |    
T  25308151 ttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaactcattta 25308052  T
Q  258 tttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    | |||||||||| |||||||| | |||||||| |||| ||||| ||||    
T  25308051 tatccttcttcactccaggccgccaaaacaacatctttaaatcttgat 25308004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 19566368 - 19566202
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||  | ||||| ||||| |||||||||||||||||||||||||||||||   | ||||| |||||||| |||||||| || |||||||    
T  19566368 ccaacaaagtccatcgaaatactatcccaattccactctggcacaaacaacggttgcatcatttcagacggcttctgatgctcaatcttagatttctgac 19566269  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctctt 294  Q
    |||| |||||| |||| | |||||| |  |  ||| |||||||||| |||||| |||||||| ||||    
T  19566268 aaacgaaacaatcatacaaaaactcagctacatccctcttcattcctggccaccaaaacaacttctt 19566202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 20342974 - 20343094
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || ||   |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  20342974 acaaaatccatagagatactgtcccacttccactccggtacgtccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttggacttctgacaaa 20343073  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  20343074 tcaaacaggcataaacaaact 20343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 23574447 - 23574567
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  23574447 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 23574546  T
Q  231 ccaaacaagcataaacaaact 251  Q
    | ||||| | ||| |||||||    
T  23574547 ctaaacaggaatacacaaact 23574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 37543057 - 37542937
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||| ||||||| ||||||||||| |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  37543057 acaaaatccatagagataatgtcccacttccactctggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 37542958  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| |||||||||||||    
T  37542957 ccaaacaggcataaacaaact 37542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 23440920 - 23441038
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||| |||||||    
T  23440920 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttatgacaaa 23441019  T
Q  231 ccaaacaagcataaacaaa 249  Q
    | ||||||| ||| |||||    
T  23441020 ctaaacaagaatacacaaa 23441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 25848767 - 25848887
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  25848767 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaat 25848866  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  25848867 tcaaacaggcataaacaaact 25848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 18776546 - 18776600
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  18776546 ggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaact 18776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 14886667 - 14886547
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  14886667 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 14886568  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  14886567 tcaaacaggcataaacaaact 14886547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 16065412 - 16065304
Alignment:
Q  170 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttca 269  Q
    |||||||||||||||||||   | |  || || ||||| |||||||| ||||||||| ||| ||| |||||||| ||||||||||| |  ||||||||||    
T  16065412 acaaacaacggttgcatcatttctggaggattatgatgctcaatcttagacttctgataaatcaatcaagcatacacaaactctgtgacatccttcttca 16065313  T
Q  270 ttccaggcc 278  Q
    |||| ||||    
T  16065312 ttcctggcc 16065304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 24798073 - 24797953
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  24798073 acaaaatccatggagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 24797974  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  24797973 tcaaacaggcataaacaaact 24797953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 21881725 - 21881779
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||| |||||||    
T  21881725 ggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaact 21881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 23517302 - 23517342
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23517302 ggtttctgatgttcaatcttcaacttctgacaaactaaaca 23517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 297
Target Start/End: Original strand, 20822148 - 20822311
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| | ||||| |||||||||||||| || |||  |||||||  || ||| ||||  ||  |||||||||||| ||| ||||| ||||||  ||    
T  20822148 aaatccatagaaatactatcccatttccactccggtacatccaacggtgtcaacaatcccgcaggcctctgatgttcaaccttagacttttgacaagtca 20822247  T
Q  234 aacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaa 297  Q
    |||| ||||| ||||||  ||  |  |||||||||| ||| | |||| |||||||| |||||||    
T  20822248 aacacgcatacacaaaccgtgcgacatccttcttcaatccggaccaccaaaacaacttcttcaa 20822311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 25423965 - 25424019
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  25423965 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 25424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 20830961 - 20830784
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20830961 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgac 20830862  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  20830861 aaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 20830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 22135127 - 22134949
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| ||||||| ||||| ||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||    
T  22135127 cccaacaaagtccatagagatactatcccacttctactgtggcacaaacaacagttgcatcaaacccgacggttttttatgttcaatcttcaacttctga 22135028  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22135027 caaaccaaacaagcataaacaaattccgcaatctccttcttcattccaggccaccaaaacaagctcttcaaatcctgat 22134949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 21201858 - 21201683
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||| ||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||| || |||||||||||||| |||||||||| ||    
T  21201858 ccaaaaaagtccatagagatactatcccacttccactctggcacaaacaatggttgcatcaaactcgatggcttctgatgttcaattttcgacttctaac 21201759  T
Q  228 aaacca---aacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||| ||   || ||| ||| | | |||     || ||||||||||||||||||||| |||||||||| |||||||||||||    
T  21201758 aaatcaaataagaaggatagagatact-----atatccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 21201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 21951702 - 21951822
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  21951702 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 21951801  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  21951802 tcaaacaggcataaacaaact 21951822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 31539563 - 31539443
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  31539563 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 31539464  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  31539463 tcaaacaggcataaacaaact 31539443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 24099169 - 24099051
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | |||||||||||||||||||| ||||||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  24099169 acaaaatccatagaaatactgtcccatttccactccggcacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 24099070  T
Q  231 ccaaacaagcataaacaaa 249  Q
     ||| ||||||||||||||    
T  24099069 tcaagcaagcataaacaaa 24099051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 20295205 - 20295325
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||| ||||||| ||||| || || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  20295205 acaaaatccatagagataatgtcccacttccagtccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 20295304  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  20295305 tcaaacaggcataaacaaact 20295325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 19855098 - 19855215
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || ||||| |||||||||||||||  |||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||||     
T  19855098 acaaaatccatagaaatgctatcccacttccactctggcacatccaacggtgtcaacaaccccgcaggcttctgatgctcaaccttagacttctgacaag 19855197  T
Q  231 ccaaacaagcataaacaa 248  Q
     |||||| ||||| ||||    
T  19855198 tcaaacatgcatacacaa 19855215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 21749800 - 21749852
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  21749800 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 22361810 - 22361690
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || |    ||||| ||| |  ||||||||||| |||| |||||| ||||||||||    
T  22361810 acaaaatccatggatatactatcccatttccactctggcacatctaaagacaccatcataccagcaggtttctgatgctcaaccttcgatttctgacaaa 22361711  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  22361710 tcaaacaagaatacacaaact 22361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 16078155 - 16078102
Alignment:
Q  198 gtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||| |||||||    
T  16078155 gtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaact 16078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 20835454 - 20835334
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || ||||| |||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||| ||||||||     
T  20835454 acaaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacatctgacaag 20835355  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  20835354 tcaaacatgcatacacaaact 20835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 129 - 305
Target Start/End: Original strand, 24687 - 24863
Alignment:
Q  129 caacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 228  Q
    ||||||| |||||| ||||| | ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24687 caacaaagtccatagagatattatcccacttccactctggtacaaacaacgattgcatcaaacccgacggtttctgatgttcaatcttcgacttctgaca 24786  T
Q  229 aaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  24787 aaccaaacaagcatacacaaactcagcaatttacttcttcattccaggccaccaaaacaacctcttcaaatcctgat 24863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 289
Target Start/End: Original strand, 232370 - 232522
Alignment:
Q  137 tccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 236  Q
    |||||| ||||||| ||||| |||||||| | ||||||||| ||||||||||||| |||||  || |||||||||||||| ||||||| |||||||||||    
T  232370 tccatagagatactatcccacttccactccgacacaaacaatggttgcatcaaactcgacgacttttgatgttcaatctttgacttctaacaaaccaaac 232469  T
Q  237 aagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaac 289  Q
    ||||||| ||||||||||   | ||||| ||||||| ||||||| ||||||||    
T  232470 aagcatacacaaactctgctctatccttattcattctaggccaccaaaacaac 232522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 13713 - 13891
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||    
T  13713 cccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgttattcaatcttcgatttctga 13812  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13813 caaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 13891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 9792 - 9969
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| ||||| | || || |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||| ||    
T  9792 ccaacaaaatccatagagatattatctcacttccactctggcacaaacaatggttgcatcaaacccgacggttttttatgttcaatcttcgatttctaac 9891  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9892 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 9969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 131 - 302
Target Start/End: Complemental strand, 551 - 380
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  551 acaaaatccatagagatactatcccactttcactctggcacaaacaagggttgcatcaaacccgacggtttctgatgttcaatcttcgattttttacaaa 452  T
Q  231 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  451 ccaaacaagcatatacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcct 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 46959 - 47137
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || ||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46959 cccaacaaagtccatagaaatgctatcccacttccactcaggcacaaacaacggttgcatgaaacccgacggtctctgatgttcaatcttcgacttctga 47058  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  47059 caaaccaaacaagcataaacaaactcagcaatttcctccttcattccaggccaccaaaacaacctcttcaaatcttgat 47137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 14237 - 14060
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||| ||    
T  14237 ccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacgtttgcatcaaacccgacggtctctgatgttcaatctttgatttctaac 14138  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  14137 aaaccaaacaagcataaacaaactcttcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 5981 - 6158
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | || || ||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  5981 ccaacaaagtccatagaaatgctatcccacttccactctggaacaaacaacggttgcatcaaacccgacggtctctaatgttcaatcttcgatttctgac 6080  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  6081 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 6158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 18853 - 19030
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| | | ||| ||||||||||||||||||| |||||||    
T  18853 ccaacaaagtccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacacaaaggtctctgatgttcaatcttcgatttctgac 18952  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18953 aaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 19030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 27766 - 27589
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  27766 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgac 27667  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  27666 aaaccaaacaagcataaacaaactcagcaatctccttcttcatcccaggccaccaaaacaacctcttcaaatcttgat 27589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 20938 - 20818
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || ||||||||||||||||| ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||     
T  20938 acaaaatccatagaaatgctgtcccatttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaag 20839  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  20838 tcaaacacgcatagacaaact 20818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 106073 - 105896
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  106073 ccaacaaagtccatagaaatgctttcccacttccactctggcacaaacaacggttgcatcaaacccgacagtctctgatgttcaatcttcgatttctgac 105974  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  105973 aaaccaaacaagcatatacaaactcagcaatttccttcttcattccaggccaccaaaagaacctcttcaaatcctgat 105896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 9362 - 9187
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |    
T  9362 cccaacaaagtccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctaa 9263  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcct 302  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9262 caaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcct 9187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 925 - 747
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||||||||||||||| | || || ||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  925 cccaacaaaatccatagaaatgctatcccacttccactctggtacaaacaacaattgcatcaaacccgacggtttctgatgttcattcttcgacttctga 826  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  825 caaaccaaacaagcataaacaaagtcatcaatttccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 119; Significance: 9e-61; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 24772 - 24945
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24772 acaaaatcgatagagatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttttgacaaa 24871  T
Q  231 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||| |||||||| ||||||||   ||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  24872 ccaatcaagcatatacaaactcatcaatttccttcttcattccaggtcac-caaacaacctcttcaaatcctgat 24945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 71995 - 72172
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | || || ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  71995 ccaacaaagtccatataaatgctatcccacttccactctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctaac 72094  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||| ||||| ||||  || ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  72095 aaaccaaacaagcatatacaaattctgcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 72172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 152 - 305
Target Start/End: Complemental strand, 32889 - 32736
Alignment:
Q  152 tcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||| ||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |    
T  32889 tcccacttccactctggaacaaacaatggttacatcaaacctgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaaccataaacgaatt 32790  T
Q  252 ctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||  ||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  32789 ctgcgatttccttcatcattcctggccaccaaaacaacctcttcaaatcctgat 32736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 9e-61; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 9291609 - 9291787
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| |    
T  9291609 cccaacaaagtccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctta 9291708  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  9291709 caaaccaaacaagcataaacaaactcagcaatttccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 9291787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 14998090 - 14998268
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | ||||| || || ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  14998090 cccaacaaagtccataaaaatactatctcacttccactttggcacaaacaacggttgcatccaacccgacggtctctgatgttcaatcttcgatttctga 14998189  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| |  || ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  14998190 caaaccaaacaagcataaacaaactcagcgatctccttcttcattccaggccaccaaaacaaccttttcaaatcttgat 14998268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 15292655 - 15292478
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  15292655 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgac 15292556  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||| |||| |  || |||||||||||||||| |||| |||||||||| |||||||| ||||    
T  15292555 aaaccaaacaagcataaacatactcagcgatctccttcttcattccagaccaccaaaacaaccttttcaaatcttgat 15292478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 13248419 - 13248597
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | ||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  13248419 cccaacaaagtccatagaaatacaatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatattcaatcttcgatttctga 13248518  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||||   ||| ||||||||||||  | || || ||||||||||||||||||| ||||    
T  13248519 caaaccaaacaagcataaacaaactcaaaaatatccttcttcattaaaagcaaccaaaacaacctcttcaaatcttgat 13248597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 305
Target Start/End: Complemental strand, 12342356 - 12342185
Alignment:
Q  133 aaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 232  Q
    |||||||||| |||| || ||||| |||||||| |||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||||||| |    
T  12342356 aaaatccatagagatgctatcccacttccactccggcacaaaaaacgattgcatcaaactcga-gacttctgatgttcaatcttcgacttctgacaaatc 12342258  T
Q  233 aaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||| ||| | ||  || |||||||||||||||||||| ||||| |||||||||||||||||||    
T  12342257 aaacaagcataaaaaaattatgcgatatccttcttcattccaggccagtaaaataacctcttcaaatcctgat 12342185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 305
Target Start/End: Original strand, 16028916 - 16029063
Alignment:
Q  158 ttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaa 257  Q
    ||||| || |||||||| || ||||||| ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||| |    
T  16028916 ttccagtcaggcacaaa-aatggttgcaacaaacccgacaacttctgatgttaaattttcgacttctgacaaaccaaacaagcatacataaactctgtta 16029014  T
Q  258 tttccttcttcattcca-ggccactaaaacaacctcttcaaatcctgat 305  Q
    | ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  16029015 tatccttcttcattccagggccaccaaaacaaccttttcaaatcctgat 16029063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 28497988 - 28497885
Alignment:
Q  19 catcaaacaagttcttggagtaattgaacgggactaacagtggctgaagtgttgtcacggcagctaacatcagaaaacagagaggctaaggtagtataaa 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            |||||||||||||||||||||||    
T  28497988 catcaaacaagttcttggagtaattgaacggggctaacagtggctgaagtgttgtcacggcagct------------cagagaggctaaggtagtataaa 28497901  T
Q  119 ttataatacccaacaa 134  Q
    ||||||||| ||||||    
T  28497900 ttataatactcaacaa 28497885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 38811698 - 38811803
Alignment:
Q  144 agatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 243  Q
    ||||||| ||||| || ||||| |||||||||| |||| |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||    
T  38811698 agatactatcccactttcactcaggcacaaacagcggtcgcatcaaacccagcggcttctgatgttcaatcttcgatttctgacaaaccaaacaagtata 38811797  T
Q  244 aacaaa 249  Q
     |||||    
T  38811798 cacaaa 38811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 20891763 - 20891880
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| ||||||||||||| |||||||| || |||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||| ||    
T  20891763 aaatccatagagatactgtcccacttccactccggtacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttggacttctgacaaatca 20891862  T
Q  234 aacaagcataaacaaact 251  Q
    | ||||||||||||||||    
T  20891863 agcaagcataaacaaact 20891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 11206725 - 11206605
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  11206725 acaaaatccatagagatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 11206626  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  11206625 tcaaacaggcataaacaaact 11206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 3264288 - 3264168
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  3264288 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 3264189  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  3264188 tcaaacaggcataaacaaact 3264168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 15147119 - 15147015
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||  |  ||||||||||||||||||||||||||||||||||    
T  15147119 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcatactagcaggtttctgatgttcaatcttcgacttctgacaaa 15147020  T
Q  231 ccaaa 235  Q
    |||||    
T  15147019 ccaaa 15147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 18226680 - 18226560
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| |||||||||   || | |  ||||| ||| |  ||||||||||| ||||||||||||||||||||||    
T  18226680 acaaaatccatggatatactatcccatttccattctggcacatctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaa 18226581  T
Q  231 ccaaacaagcataaacaaact 251  Q
    | ||||| | ||| |||||||    
T  18226580 ctaaacaggaatacacaaact 18226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 15078482 - 15078533
Alignment:
Q  200 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||||||||||    
T  15078482 ttctgatgttcaaccttagacttctgacaaatcaaacatgcataaacaaact 15078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 16354679 - 16354579
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| |||||||||   |||| |  ||||| ||  |  |||||||||||||||||||||||||| |||||||    
T  16354679 acaaaatccatggatatactatcccatttccattctggcacatctaacgataccatcatacaagcaggtttctgatgttcaatcttcgacttgtgacaaa 16354580  T
Q  231 c 231  Q
    |    
T  16354579 c 16354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 33223701 - 33223821
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| ||||| || || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||     
T  33223701 acaaaatccatagagatactgtcccacttccattccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaag 33223800  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  33223801 tcaaacatgcatacacaaact 33223821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 14691680 - 14691786
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | || || ||||||||||||||||| |||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| |||||||    
T  14691680 acaaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaa 14691779  T
Q  231 ccaaaca 237  Q
     ||||||    
T  14691780 tcaaaca 14691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 12524520 - 12524573
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 250  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | ||| ||||||    
T  12524520 ggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaac 12524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 455 - 632
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  455 ccaacaaaatccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaactcgacggtctctgatgttcaatcttcgacttttgac 554  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||| ||| | || |  || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  555 aaaccaaacaagcatagacatattcagcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 130 - 305
Target Start/End: Original strand, 7977 - 8152
Alignment:
Q  130 aacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 229  Q
    |||||||| |||| ||||| | ||||| |||||||||||||||||||||| |||||||||||| |||||| | |||||||||||||||||||| ||||||    
T  7977 aacaaaattcatagagatattatcccacttccactctggcacaaacaacgattgcatcaaacctgacggtctatgatgttcaatcttcgacttatgacaa 8076  T
Q  230 accaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||| || | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8077 accaaacaagcataaacaaattccgcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 3445 - 3267
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | || || ||||| |||||||| ||||||||||||||||||||||||| || |||| |||||| |||||||||||| ||||||    
T  3445 cccaacaaagtccatagaaatgctatcccacttccactccggcacaaacaacggttgcatcaaactcgtcggtctctgattttcaatcttcgatttctga 3346  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3345 caaaccaaacaagcataaacaaactcagcaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 3267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 268 - 445
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||||||| | || || |||||  |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  268 ccaacaaaatccatagaaatgctatcccaaatccactctggaacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgac 367  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||||||||| | ||| || |||||||||||||||||| ||||||||||||||||||| ||||    
T  368 aaaccaaacaagcataaacaaactcagcaatatcattcttcattccaggccaccaaaacaacctcttcaaatcttgat 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 130 - 305
Target Start/End: Original strand, 3966 - 4141
Alignment:
Q  130 aacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 229  Q
    ||||||||||||| | || || ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  3966 aacaaaatccatagaaatgctatcccacttccactctggcacgaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttcggacaa 4065  T
Q  230 accaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||| ||||||||| |||||||| | ||||||||||||||||||||||||  ||||||| ||||||||||| ||||    
T  4066 accagacaagcatatacaaactcagcaatttccttcttcattccaggccatcaaaacaatctcttcaaatcatgat 4141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 15461 - 15639
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | ||  | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||    
T  15461 cccaacaaattccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgataaatcttcgatttctga 15560  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||    ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15561 caaaccaaacaagcataaacaaactaaacaatctccttcttcattccaggccaccaaaacaacctcttcaaatcctgat 15639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 44344 - 44408
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacc 192  Q
    ||||||||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||    
T  44344 ccaacaaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacc 44408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 8390 - 8213
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    |||||||| |||||| | || |||||| | ||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||||    
T  8390 ccaacaaagtccatagaaatgctgtccaacttccactctagcacaaacaacggttgtatcaaacccggcggtttctaatgttcaatctttgacttctgac 8291  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
     |||||||||||||||||||||||| | || |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8290 gaaccaaacaagcataaacaaactcagcaaattccttcttcattctaggccaccaaaacaacctcttcaaatcctgat 8213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 130 - 305
Target Start/End: Original strand, 3350 - 3525
Alignment:
Q  130 aacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 229  Q
    |||||| |||||| | ||| | ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||    
T  3350 aacaaagtccatagaaatattatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttttgacaa 3449  T
Q  230 accaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    | |||||||||||||||||||||   ||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3450 agcaaacaagcataaacaaactcaccaatctccttcttcattccaggccaccaaaacaacctcttcaaatcttgat 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 127 - 305
Target Start/End: Complemental strand, 55401 - 55223
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||| |||| |||||| | || || ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  55401 cccagcaaagtccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcaatttctga 55302  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||||||||| |||||| | ||| ||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  55301 caaaccaaacaagcataaaaaaactcagcaatatccatcttcattccaggccaccaaaacaacctcttcaaatcttgat 55223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 28869 - 28749
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  28869 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcgggtttctgatgttcaatcttcgacttctgacaaa 28770  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  28769 ccaaacaggaatacacaaact 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 128 - 305
Target Start/End: Original strand, 8071 - 8248
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac 227  Q
    ||||||||||| ||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||  |||||||||||| || ||||||||| || ||||    
T  8071 ccaacaaaatctatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacctaacggtttctgatatttaatcttcgatttttgac 8170  T
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||| ||||||||||||||||| ||||  || ||||||||||||||||||||| |||||| |||||||||||||||||    
T  8171 aaacaaaacaagcataaacaaattctgcgatctccttcttcattccaggccaccaaaacagcctcttcaaatcctgat 8248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 152 - 289
Target Start/End: Original strand, 180754 - 180891
Alignment:
Q  152 tcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  180754 tcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaaact 180853  T
Q  252 ctgtaatttccttcttcattccaggccactaaaacaac 289  Q
    | | ||| ||||||||||||| ||||||| ||||||||    
T  180854 cagcaatctccttcttcattcaaggccaccaaaacaac 180891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 295 - 470
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    |||||||||||||||| | ||  | ||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  295 cccaacaaaatccatagatatgttatcccacttccgttctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttccaa 394  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||||||||||||| ||   ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  395 caaaccaaacaagcataaacaaactctgcaa---cctccttcattccaggccaccaaaacaacctctttaaatcctgat 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 153 - 305
Target Start/End: Complemental strand, 7283 - 7131
Alignment:
Q  153 cccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactc 252  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  7283 cccatttccactttggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgacaaaccaagcaaacataaacaaactc 7184  T
Q  253 tgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
     |  || ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7183 agcgatctccttcttcattccaggccaccaaaacaaccttttcaaatcctgat 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 305
Target Start/End: Original strand, 26611 - 26789
Alignment:
Q  127 cccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 226  Q
    ||||||||| |||||| | ||  | ||||| ||||| ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||| |    
T  26611 cccaacaaagtccatagaaatgttatcccacttccattctggcacaaacaacggttgcatcaaacccgatagtctctgatgttcaatcttcgatttctta 26710  T
Q  227 caaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||| ||||||||||||| || |  || ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26711 caaaccaaataagcataaacaaaatcagcgatctccttcttcattccaggccaccaaaacaacctcttcaaatcatgat 26789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 305
Target Start/End: Original strand, 75406 - 75541
Alignment:
Q  170 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttca 269  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||  || || ||||||||||    
T  75406 acaaacaacggttgcatccaacccgatggcttctgatgttcaatcttagacttttgacaaagcaaacaagcatatacaaacttcgttatatccttcttca 75505  T
Q  270 ttccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||| ||||||| ||||||||||| ||||    
T  75506 ttccaggccaccaaaacaatctcttcaaatcatgat 75541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19929 - 20049
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || ||||| |||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  19929 acaaaatccatagaaatgctatcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaacctttgacttctgacaag 20028  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  20029 tcaaacatgcatacacaaact 20049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 45327 - 45418
Alignment:
Q  152 tcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 243  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  45327 tcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttaaatcttcgatttctgacaaaccaaacaagcata 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 305
Target Start/End: Complemental strand, 9564 - 9390
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| || || | || || ||| |||| || ||||||||| ||| |||||||   ||||| ||||| || |||||||||||||| |||||||    
T  9564 acaaaatccatagagttattatctcacttctactcaggtacaaacaacagttacatcaaatatgacggcttctgctgctcaatcttcgacttttgacaaa 9465  T
Q  231 ccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    ||||||||||||| ||||||| |   || ||||||||||||||| |||| |||||||||||||||||||||||||    
T  9464 ccaaacaagcatacacaaacttttctatatccttcttcattccatgccattaaaacaacctcttcaaatcctgat 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 23082 - 23159
Alignment:
Q  228 aaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttcaaatcctgat 305  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  23082 aaaccaaacaagcataaataaactctgcaatttccttcttcattccaggccactaaaacaacttcatcaaatcctgat 23159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 14944 - 15028
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaa 212  Q
    ||||||||||||||| |||||   ||||| ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  14944 ccaacaaaatccatagagatatgatcccacttccactttggcacaaacaatggttgcatcaaacctgacggtttctgatgttcaa 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 39317 - 39211
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  39317 acaaaatccatggatatactatcccatttccactctggcacatctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaa 39218  T
Q  231 ccaaaca 237  Q
    | |||||    
T  39217 ctaaaca 39211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 3003 - 3123
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||    
T  3003 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcgtcgacttctgacaaa 3102  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  3103 ccaaacaggaatacacaaact 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 24307 - 24427
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||    
T  24307 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcatcgacttctgacaaa 24406  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  24407 ccaaacaggaatacacaaact 24427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 14848 - 14968
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||| |||||    
T  14848 acaaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaa 14947  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||||||| |||||||    
T  14948 tcaaacaagcatacacaaact 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 19411 - 19531
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| || ||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  19411 acaaaatccatggatatactatctcatttccactctggcacatctaaggataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 19510  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  19511 ccaaacaggaatacacaaact 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 34835 - 34955
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| || ||||||||||||||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||    
T  34835 acaaaatccatggatatactatctcatttccactctggcacatctaaggataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaa 34934  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  34935 ccaaacaggaatacacaaact 34955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 63528 - 63408
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    ||||||||||| || ||||| |||||||||||||||||||||   || | |  ||||| ||| |  ||||||| ||||||||||||||||||||||||||    
T  63528 acaaaatccatgcatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttcttatgttcaatcttcgacttctgacaaa 63429  T
Q  231 ccaaacaagcataaacaaact 251  Q
    || |||| | ||| |||||||    
T  63428 cctaacaggaatacacaaact 63408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 181008 - 181128
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  |||||||||||||| |||||||||||||||||||    
T  181008 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcgatcttcgacttctgacaaa 181107  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  181108 ccaaacaggaatacacaaact 181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 101049 - 100929
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | ||| ||||||| |||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| |||||||||||||    
T  101049 acaaaatccatagaaatattgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaaa 100950  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| ||||| |||||||    
T  100949 tcaaacacgcatacacaaact 100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 196909 - 196855
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  196909 ggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaact 196855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 6823 - 6943
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   || | |  ||||| ||| |  |||||||||||||||| ||||||||| |||||||    
T  6823 acaaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaaccttcgacttatgacaaa 6922  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  6923 tcaaacaagaatacacaaact 6943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 41830 - 41710
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| ||||||||||||| |||||||| || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||    
T  41830 acaaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaa 41731  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| |||||||||||||    
T  41730 tcaaacaggcataaacaaact 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 278261 - 278221
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  278261 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 7181 - 7299
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   |||| |  ||||| ||| |  ||||| ||||| |||| |||||||||||||||||    
T  7181 acaaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttttgatgctcaaccttcgacttctgacaaa 7280  T
Q  231 ccaaacaagcataaacaaa 249  Q
     |||||||| ||| |||||    
T  7281 tcaaacaagaatacacaaa 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 19433 - 19380
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 250  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  19433 ggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaac 19380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 9779 - 9899
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||| |||||||||||||||||   ||||||  |||||| || |  ||||| ||||| |||| ||| |||||||||||||    
T  9779 acaaaatccatggatatactatcctatttccactctggcacatctaacggtgtcatcaaccctgcaggtttttgatgctcaacctttgacttctgacaaa 9878  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||||| ||| |||||||    
T  9879 tcaaacaagaatacacaaact 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 3311 - 3203
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| || ||||||||||||||||||   || | |  ||||| ||| |  ||||||||| ||||| ||||||||||||||||||    
T  3311 acaaaatccatggatatactatctcatttccactctggcacatctaaggataccatcataccagcgggtttctgacgttcagtcttcgacttctgacaaa 3212  T
Q  231 ccaaacaag 239  Q
    |||||||||    
T  3211 ccaaacaag 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 6858 - 6978
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||| ||||||   |||| |  ||||| ||| |  ||||||||||| |||| |||||||||||||||||    
T  6858 acaaaatccatggatatactatcccatttccactcaggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaa 6957  T
Q  231 ccaaacaagcataaacaaact 251  Q
     ||| |||| ||| |||||||    
T  6958 tcaagcaagaatacacaaact 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 13277 - 13397
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| |||||||||   || | |  ||||| ||| |  ||||||||||| ||||||||||||||||||||||    
T  13277 acaaaatccatggatatactatcccatttccattctggcacatctaaagataccatcataccagcaggtttctgatgctcaatcttcgacttctgacaaa 13376  T
Q  231 ccaaacaagcataaacaaact 251  Q
    | ||||| | ||| |||||||    
T  13377 ctaaacaggaatacacaaact 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 571 - 679
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctgtaatttccttcttcattccaggccactaaaacaacctcttca 296  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| ||||| | || ||  || |  |||| ||||| |||| |||||||| ||||||    
T  571 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaattgtgcaacatcgtgtttcaatccagaccaccaaaacaacttcttca 670  T
Q  297 aatcctgat 305  Q
    |||| ||||    
T  671 aatcatgat 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 229918 - 229970
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 249  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  229918 ggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaa 229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 27073 - 27188
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| ||||||||||||| |||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||| ||    
T  27073 aaatccatagagatactgtcccacttccactacggtacatcaaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaatca 27172  T
Q  234 aacaagcataaacaaa 249  Q
    ||||||||||||||||    
T  27173 aacaagcataaacaaa 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 3836 - 3782
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  3836 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 7762 - 7708
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||    
T  7762 ggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaact 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 9471 - 9525
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  9471 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 33070 - 32950
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| |||||||||   || | |  ||||| ||| |  ||||||||||| |||||||| ||| |||||||||    
T  33070 acaaaatccatggatatactatcccatttccattctggcacatctaaagataccatcataccagcgggtttctgatgctcaatctttgacctctgacaaa 32971  T
Q  231 ccaaacaagcataaacaaact 251  Q
    ||||||| | ||| |||||||    
T  32970 ccaaacaggaatacacaaact 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 15235 - 15289
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  15235 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 29820 - 29877
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaactctg 254  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||||||    
T  29820 ggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactctg 29877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 25783 - 25883
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| ||||||||||| |||||||||   |||| |  ||||| ||  |  |||||||||||||||||||||||||| |||||||    
T  25783 acaaaatccatggatatactatcccatttccattctggcacatctaacgataccatcatacaagcaggtttctgatgttcaatcttcgacttgtgacaaa 25882  T
Q  231 c 231  Q
    |    
T  25883 c 25883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 490 - 439
Alignment:
Q  200 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  490 ttctgatgttcaaccttagacttctgacaaatcaaacatgcatatacaaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 1485 - 1604
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | ||||| |||||||||||||||||||||   ||   |  ||||| ||| |  ||||||||||| ||||  ||||||||||||||||    
T  1485 acaaaatccatggatatactatcccatttccactctggcacatctaaatataccatcataccagcaggtttctgatgctcaactttcgacttctgacaaa 1584  T
Q  231 ccaaacaagcataaacaaac 250  Q
     |||||||| ||| ||||||    
T  1585 tcaaacaagaatacacaaac 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 305 - 214
Alignment:
Q  146 atactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaaca 237  Q
    |||||||||||||||||||||||||||   || | |  ||||| ||  |  ||||| ||||||||||||||||| ||||||||||| |||||    
T  305 atactgtcccatttccactctggcacatctaaggataccatcatactagcaggtttgtgatgttcaatcttcgatttctgacaaactaaaca 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 3419 - 3364
Alignment:
Q  128 ccaacaaaatccatacagatactgtcccatttccactctggcacaaacaacggttg 183  Q
    ||||||||||||||| | ||||| ||| | |||||||| |||||||||||||||||    
T  3419 ccaacaaaatccatatatatactatcctacttccactccggcacaaacaacggttg 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 1498 - 1444
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  1498 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 2342 - 2396
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||| ||| |||||||    
T  2342 ggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaact 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 12303 - 12409
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | || || ||||||||||||||||| |||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| |||||||    
T  12303 acaaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaa 12402  T
Q  231 ccaaaca 237  Q
     ||||||    
T  12403 tcaaaca 12409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 16530 - 16584
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  16530 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 22742 - 22796
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||||    
T  22742 ggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaact 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 51677 - 51559
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || |||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  51677 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 51578  T
Q  231 ccaaacaagcataaacaaa 249  Q
     |||||| ||||| |||||    
T  51577 tcaaacacgcatatacaaa 51559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 60711 - 60593
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || |||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  60711 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 60612  T
Q  231 ccaaacaagcataaacaaa 249  Q
     |||||| ||||| |||||    
T  60611 tcaaacacgcatatacaaa 60593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 67099 - 66981
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||| | || || |||||||||||||| || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||     
T  67099 acaaaatccatagaaatgctatcccatttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaag 67000  T
Q  231 ccaaacaagcataaacaaa 249  Q
     |||||| ||||| |||||    
T  66999 tcaaacacgcatatacaaa 66981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 390631 - 390577
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 251  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  390631 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 390577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 32813 - 32696
Alignment:
Q  134 aaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 233  Q
    ||||||||| | ||||||||||| |||||||| || |||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||    
T  32813 aaatccatagaaatactgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtca 32714  T
Q  234 aacaagcataaacaaact 251  Q
    |||| ||||| |||||||    
T  32713 aacatgcatacacaaact 32696  T

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Target: scaffold0145 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 39442 - 39389
Alignment:
Q  197 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaac 250  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||    
T  39442 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaac 39389  T

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Target: scaffold0396 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 4840 - 4960
Alignment:
Q  131 acaaaatccatacagatactgtcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 230  Q
    |||||||||||  | || || ||||||||||||||| | ||| | || |||  ||||||||| |  ||||||||||| ||||  || |||||||||||||    
T  4840 acaaaatccatggatatgctatcccatttccactctagaacatataaaggtgtcatcaaacctgcaggtttctgatgctcaacttttgacttctgacaaa 4939  T
Q  231 ccaaacaagcataaacaaact 251  Q
     |||||| | ||| |||||||    
T  4940 tcaaacaggaatacacaaact 4960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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