View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9288A_low_178 (Length: 298)

Name: NF9288A_low_178
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9288A_low_178
NF9288A_low_178
[»] chr8 (56 HSPs)
chr8 (135-270)||(26238946-26239081)
chr8 (1-127)||(7744068-7744194)
chr8 (1-124)||(26239382-26239505)
chr8 (135-266)||(41824182-41824313)
chr8 (8-130)||(41824605-41824727)
chr8 (132-270)||(22273613-22273760)
chr8 (135-218)||(5037780-5037863)
chr8 (59-130)||(11720093-11720164)
chr8 (24-91)||(41041367-41041434)
chr8 (132-270)||(3152211-3152340)
chr8 (1-79)||(9672095-9672173)
chr8 (132-218)||(13484800-13484886)
chr8 (132-218)||(41041002-41041088)
chr8 (24-124)||(15307567-15307667)
chr8 (24-124)||(15487936-15488036)
chr8 (135-218)||(42943142-42943225)
chr8 (24-124)||(27404893-27404993)
chr8 (24-124)||(29238469-29238569)
chr8 (24-83)||(40338463-40338522)
chr8 (141-218)||(13283717-13283794)
chr8 (132-261)||(29694041-29694177)
chr8 (34-130)||(13283321-13283417)
chr8 (180-270)||(5037851-5037933)
chr8 (180-270)||(42943213-42943295)
chr8 (229-270)||(3152177-3152218)
chr8 (141-218)||(13107094-13107171)
chr8 (141-218)||(27692525-27692602)
chr8 (141-218)||(29237475-29237552)
chr8 (141-218)||(33761393-33761470)
chr8 (141-218)||(33762405-33762482)
chr8 (141-218)||(35509538-35509615)
chr8 (157-218)||(38548569-38548630)
chr8 (232-269)||(41824111-41824148)
chr8 (34-130)||(13107471-13107567)
chr8 (230-269)||(601499-601538)
chr8 (230-269)||(8608459-8608498)
chr8 (230-269)||(13107025-13107064)
chr8 (230-269)||(13283824-13283863)
chr8 (230-269)||(15308056-15308095)
chr8 (230-269)||(15488425-15488464)
chr8 (230-269)||(27404465-27404504)
chr8 (230-269)||(27692632-27692671)
chr8 (230-269)||(29238982-29239021)
chr8 (230-269)||(33761324-33761363)
chr8 (230-269)||(33762512-33762551)
chr8 (230-269)||(35509469-35509508)
chr8 (230-269)||(35510614-35510653)
chr8 (157-218)||(8608528-8608589)
chr8 (141-218)||(15307949-15308026)
chr8 (141-218)||(15488318-15488395)
chr8 (141-218)||(35510507-35510584)
chr8 (34-99)||(38548157-38548222)
chr8 (54-130)||(8608905-8608981)
chr8 (132-192)||(17807308-17807368)
chr8 (230-270)||(41040941-41040981)
chr8 (230-258)||(43262002-43262030)
[»] chr7 (53 HSPs)
chr7 (132-266)||(38549763-38549897)
chr7 (1-130)||(38550188-38550317)
chr7 (1-130)||(45360588-45360717)
chr7 (1-130)||(48851214-48851343)
chr7 (8-130)||(6604699-6604821)
chr7 (8-130)||(22155159-22155281)
chr7 (8-130)||(22211074-22211196)
chr7 (3-130)||(47384950-47385077)
chr7 (132-269)||(47384515-47384660)
chr7 (1-130)||(34775706-34775835)
chr7 (132-215)||(34775334-34775417)
chr7 (132-268)||(13036254-13036398)
chr7 (132-269)||(37791875-37792019)
chr7 (8-91)||(38472907-38472990)
chr7 (132-218)||(39857969-39858055)
chr7 (24-93)||(24227201-24227270)
chr7 (1-130)||(35692093-35692222)
chr7 (157-218)||(48227713-48227774)
chr7 (132-265)||(13169380-13169504)
chr7 (132-265)||(45361007-45361131)
chr7 (8-91)||(46438291-46438374)
chr7 (1-99)||(77309-77407)
chr7 (139-270)||(24226801-24226923)
chr7 (136-218)||(23904886-23904969)
chr7 (135-218)||(46437925-46438008)
chr7 (140-218)||(29995201-29995279)
chr7 (132-218)||(38472541-38472627)
chr7 (180-271)||(46437854-46437937)
chr7 (141-218)||(77737-77814)
chr7 (141-218)||(20479408-20479485)
chr7 (141-218)||(27664732-27664809)
chr7 (230-270)||(22211602-22211642)
chr7 (230-270)||(35691647-35691687)
chr7 (135-218)||(22155575-22155657)
chr7 (135-218)||(22211490-22211572)
chr7 (180-219)||(23904859-23904898)
chr7 (135-218)||(35691717-35691800)
chr7 (230-269)||(39857866-39857905)
chr7 (230-270)||(6605226-6605266)
chr7 (230-270)||(22155687-22155727)
chr7 (180-265)||(34775266-34775343)
chr7 (230-270)||(38472480-38472520)
chr7 (230-269)||(29995132-29995171)
chr7 (230-269)||(35403414-35403453)
chr7 (180-219)||(48227762-48227801)
chr7 (59-125)||(7403224-7403290)
chr7 (183-270)||(37114161-37114240)
chr7 (206-260)||(48311536-48311590)
chr7 (141-218)||(35403307-35403384)
chr7 (132-204)||(37114236-37114306)
chr7 (132-184)||(6605110-6605162)
chr7 (230-262)||(20479515-20479547)
chr7 (234-270)||(38549725-38549761)
[»] chr4 (42 HSPs)
chr4 (132-270)||(54387615-54387752)
chr4 (1-125)||(54387202-54387320)
chr4 (1-130)||(48645674-48645810)
chr4 (1-125)||(35402419-35402540)
chr4 (1-91)||(41760382-41760472)
chr4 (133-270)||(49524473-49524602)
chr4 (203-270)||(48645509-48645576)
chr4 (1-83)||(11254721-11254803)
chr4 (43-130)||(2692029-2692116)
chr4 (132-218)||(35402039-35402125)
chr4 (8-125)||(11641348-11641465)
chr4 (132-219)||(11254347-11254434)
chr4 (132-261)||(2691602-2691740)
chr4 (1-99)||(51013179-51013277)
chr4 (205-270)||(11641860-11641925)
chr4 (28-91)||(42981874-42981937)
chr4 (157-218)||(20494115-20494176)
chr4 (180-270)||(35401969-35402051)
chr4 (32-124)||(833906-833998)
chr4 (141-218)||(320588-320665)
chr4 (135-188)||(42982196-42982249)
chr4 (141-218)||(43520797-43520874)
chr4 (230-270)||(48645475-48645515)
chr4 (230-269)||(320695-320734)
chr4 (230-269)||(833478-833517)
chr4 (230-269)||(834837-834876)
chr4 (59-130)||(4614843-4614914)
chr4 (230-269)||(5438066-5438105)
chr4 (230-269)||(20494048-20494087)
chr4 (59-130)||(28101225-28101296)
chr4 (230-269)||(33264638-33264677)
chr4 (230-269)||(33265805-33265844)
chr4 (230-269)||(43507422-43507461)
chr4 (230-269)||(43508448-43508487)
chr4 (148-218)||(4173435-4173505)
chr4 (141-218)||(4172436-4172513)
chr4 (141-218)||(5438135-5438212)
chr4 (141-218)||(33264707-33264784)
chr4 (141-218)||(33265698-33265775)
chr4 (141-218)||(43508341-43508418)
chr4 (32-124)||(5438961-5439053)
chr4 (160-212)||(41759604-41759656)
[»] chr6 (34 HSPs)
chr6 (1-130)||(6902211-6902340)
chr6 (1-130)||(7050820-7050949)
chr6 (1-123)||(10569461-10569583)
chr6 (1-125)||(11356447-11356571)
chr6 (132-270)||(21091314-21091443)
chr6 (24-130)||(9399393-9399499)
chr6 (131-270)||(21045564-21045694)
chr6 (200-270)||(7051044-7051114)
chr6 (132-218)||(7371422-7371508)
chr6 (200-270)||(10569684-10569754)
chr6 (132-270)||(21068879-21069008)
chr6 (206-270)||(6902703-6902767)
chr6 (132-218)||(11356866-11356952)
chr6 (8-91)||(7371766-7371849)
chr6 (24-130)||(32437825-32437931)
chr6 (45-130)||(33267691-33267776)
chr6 (1-91)||(20524679-20524769)
chr6 (132-205)||(33267321-33267394)
chr6 (136-192)||(6902659-6902715)
chr6 (230-270)||(21068845-21068885)
chr6 (132-218)||(20525048-20525133)
chr6 (141-218)||(13610970-13611047)
chr6 (26-99)||(18644558-18644631)
chr6 (230-270)||(10569748-10569788)
chr6 (230-269)||(21045531-21045570)
chr6 (216-270)||(33277012-33277066)
chr6 (180-266)||(20525121-20525199)
chr6 (132-204)||(9399767-9399839)
chr6 (230-270)||(9399864-9399904)
chr6 (180-265)||(11356940-11357017)
chr6 (230-270)||(11357025-11357065)
chr6 (230-269)||(13610901-13610940)
chr6 (230-269)||(32518292-32518331)
chr6 (230-262)||(3480453-3480485)
[»] chr1 (47 HSPs)
chr1 (1-130)||(52642570-52642699)
chr1 (1-125)||(50554851-50554975)
chr1 (135-270)||(52642142-52642277)
chr1 (8-130)||(6817544-6817666)
chr1 (1-99)||(15105698-15105796)
chr1 (3-91)||(37087483-37087571)
chr1 (1-130)||(33599886-33600015)
chr1 (132-235)||(15106064-15106165)
chr1 (132-265)||(50554431-50554556)
chr1 (26-130)||(27088563-27088667)
chr1 (59-130)||(31237485-31237556)
chr1 (132-218)||(2870789-2870875)
chr1 (132-218)||(6817169-6817255)
chr1 (132-218)||(31237109-31237195)
chr1 (132-218)||(51894857-51894943)
chr1 (24-125)||(26224293-26224394)
chr1 (135-270)||(45045140-45045284)
chr1 (180-270)||(3012075-3012157)
chr1 (130-218)||(3012145-3012233)
chr1 (132-218)||(37087849-37087935)
chr1 (141-218)||(1443870-1443947)
chr1 (141-218)||(9120362-9120439)
chr1 (73-130)||(42558592-42558649)
chr1 (141-218)||(47011779-47011856)
chr1 (230-269)||(50554384-50554423)
chr1 (180-270)||(2870863-2870945)
chr1 (141-218)||(8168265-8168342)
chr1 (141-218)||(20944778-20944855)
chr1 (141-218)||(34776859-34776936)
chr1 (180-270)||(51894787-51894869)
chr1 (180-269)||(31237040-31237121)
chr1 (34-130)||(34777235-34777331)
chr1 (230-265)||(6817070-6817105)
chr1 (230-269)||(8168196-8168235)
chr1 (230-269)||(8169363-8169402)
chr1 (230-269)||(25277031-25277070)
chr1 (230-269)||(27089074-27089113)
chr1 (230-269)||(33599439-33599478)
chr1 (230-269)||(34776790-34776829)
chr1 (230-269)||(37345757-37345796)
chr1 (141-218)||(8169256-8169333)
chr1 (180-270)||(37087923-37088005)
chr1 (230-262)||(1443977-1444009)
chr1 (230-262)||(9120300-9120332)
chr1 (143-219)||(46582273-46582349)
chr1 (230-258)||(52642086-52642114)
chr1 (230-270)||(52642108-52642148)
[»] chr3 (67 HSPs)
chr3 (1-130)||(51685672-51685801)
chr3 (132-270)||(51686091-51686229)
chr3 (1-130)||(42281794-42281923)
chr3 (135-270)||(42282216-42282342)
chr3 (140-266)||(46113810-46113936)
chr3 (1-130)||(27897858-27897987)
chr3 (132-218)||(17516686-17516772)
chr3 (1-91)||(21349966-21350056)
chr3 (134-218)||(43766763-43766847)
chr3 (1-91)||(44275000-44275090)
chr3 (1-91)||(46198991-46199081)
chr3 (208-270)||(48829610-48829672)
chr3 (132-213)||(21350335-21350416)
chr3 (134-270)||(610930-611057)
chr3 (54-125)||(24845922-24845992)
chr3 (132-218)||(2378654-2378740)
chr3 (1-91)||(43766393-43766483)
chr3 (1-99)||(53188474-53188572)
chr3 (1-130)||(35904492-35904621)
chr3 (132-212)||(27897488-27897568)
chr3 (132-212)||(30598633-30598713)
chr3 (1-91)||(30598991-30599080)
chr3 (134-212)||(44268277-44268355)
chr3 (157-218)||(54412259-54412320)
chr3 (43-109)||(13466499-13466565)
chr3 (8-65)||(2378268-2378325)
chr3 (73-130)||(32843075-32843132)
chr3 (1-57)||(48829831-48829887)
chr3 (230-270)||(51686223-51686263)
chr3 (141-215)||(41979074-41979148)
chr3 (180-270)||(17516760-17516842)
chr3 (141-218)||(46310124-46310201)
chr3 (141-218)||(46610991-46611068)
chr3 (180-270)||(54412334-54412416)
chr3 (230-270)||(611051-611091)
chr3 (230-270)||(2378812-2378852)
chr3 (54-130)||(7883992-7884068)
chr3 (230-266)||(27897425-27897461)
chr3 (230-269)||(2661703-2661742)
chr3 (230-269)||(3150507-3150546)
chr3 (230-269)||(28626666-28626705)
chr3 (230-269)||(35904046-35904085)
chr3 (230-269)||(38192138-38192177)
chr3 (230-269)||(38193305-38193344)
chr3 (34-125)||(41978678-41978769)
chr3 (180-227)||(43766835-43766882)
chr3 (230-269)||(44795685-44795724)
chr3 (230-269)||(46310231-46310270)
chr3 (230-269)||(46609404-46609443)
chr3 (79-130)||(48829777-48829828)
chr3 (230-269)||(53092878-53092917)
chr3 (230-269)||(53094068-53094107)
chr3 (230-269)||(53187997-53188036)
chr3 (136-210)||(23291867-23291941)
chr3 (148-218)||(46309131-46309201)
chr3 (141-218)||(7883618-7883695)
chr3 (204-269)||(24846349-24846414)
chr3 (180-270)||(30598557-30598639)
chr3 (141-214)||(35904118-35904191)
chr3 (141-218)||(38193198-38193275)
chr3 (141-214)||(44795578-44795651)
chr3 (141-218)||(46609473-46609550)
chr3 (141-218)||(54899796-54899873)
chr3 (230-270)||(21350434-21350474)
chr3 (230-270)||(23291789-23291829)
chr3 (230-270)||(44268201-44268241)
chr3 (230-270)||(48829576-48829616)
[»] chr2 (38 HSPs)
chr2 (1-130)||(39663808-39663937)
chr2 (9-125)||(19581838-19581954)
chr2 (1-124)||(44708571-44708694)
chr2 (200-270)||(19581668-19581738)
chr2 (132-270)||(6799146-6799276)
chr2 (132-271)||(17697848-17697979)
chr2 (3-84)||(6798779-6798860)
chr2 (1-91)||(2768185-2768275)
chr2 (132-218)||(16377052-16377138)
chr2 (132-218)||(42517847-42517933)
chr2 (26-91)||(17697503-17697568)
chr2 (132-270)||(39456519-39456649)
chr2 (24-124)||(6784037-6784137)
chr2 (1-91)||(42518212-42518300)
chr2 (132-218)||(19907006-19907092)
chr2 (1-91)||(34400965-34401055)
chr2 (134-215)||(34400601-34400682)
chr2 (202-269)||(31474880-31474947)
chr2 (67-125)||(31471007-31471065)
chr2 (230-270)||(19581634-19581674)
chr2 (24-99)||(24206305-24206380)
chr2 (141-218)||(2577169-2577246)
chr2 (180-270)||(16376956-16377038)
chr2 (141-218)||(37021875-37021952)
chr2 (180-270)||(42517777-42517859)
chr2 (138-214)||(39663437-39663513)
chr2 (230-269)||(19906903-19906942)
chr2 (141-218)||(16764300-16764377)
chr2 (216-261)||(37646293-37646338)
chr2 (230-269)||(6783610-6783649)
chr2 (230-269)||(14387604-14387643)
chr2 (231-269)||(24205853-24205891)
chr2 (141-218)||(24205922-24205999)
chr2 (230-267)||(39663375-39663412)
chr2 (141-218)||(40561600-40561677)
chr2 (216-268)||(161890-161942)
chr2 (230-262)||(2577276-2577308)
chr2 (230-262)||(40561707-40561739)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-130)||(107330-107459)
scaffold0004 (132-269)||(106914-107041)
scaffold0004 (230-269)||(106880-106919)
[»] scaffold0345 (4 HSPs)
scaffold0345 (1-125)||(808-932)
scaffold0345 (132-218)||(1227-1313)
scaffold0345 (180-265)||(1301-1378)
scaffold0345 (230-270)||(1386-1426)
[»] chr5 (39 HSPs)
chr5 (1-130)||(2181023-2181152)
chr5 (1-99)||(18624089-18624187)
chr5 (132-218)||(12738415-12738501)
chr5 (132-218)||(12801238-12801324)
chr5 (3-91)||(34328177-34328265)
chr5 (1-91)||(28821646-28821736)
chr5 (130-218)||(32134526-32134614)
chr5 (132-215)||(34328545-34328628)
chr5 (132-212)||(30464239-30464319)
chr5 (24-124)||(42472232-42472332)
chr5 (59-130)||(30464608-30464679)
chr5 (132-218)||(8541018-8541104)
chr5 (24-130)||(21842277-21842383)
chr5 (161-218)||(2181438-2181495)
chr5 (180-270)||(2181483-2181565)
chr5 (157-270)||(28813528-28813634)
chr5 (1-97)||(17575188-17575284)
chr5 (1-97)||(17575908-17576004)
chr5 (1-97)||(17577219-17577315)
chr5 (132-235)||(18623720-18623821)
chr5 (141-218)||(7269168-7269245)
chr5 (180-270)||(32134456-32134538)
chr5 (141-218)||(40781900-40781977)
chr5 (230-269)||(12738565-12738604)
chr5 (230-269)||(12801388-12801427)
chr5 (132-198)||(28821804-28821870)
chr5 (141-218)||(17576311-17576388)
chr5 (141-218)||(17577623-17577700)
chr5 (132-260)||(41494074-41494210)
chr5 (230-270)||(30464120-30464160)
chr5 (230-269)||(7269275-7269314)
chr5 (230-269)||(24540017-24540056)
chr5 (230-269)||(42471769-42471808)
chr5 (34-99)||(7268782-7268847)
chr5 (157-218)||(24540086-24540147)
chr5 (141-214)||(29620465-29620538)
chr5 (59-99)||(28036148-28036188)
chr5 (230-262)||(29620399-29620431)
chr5 (230-262)||(30464171-30464203)
[»] scaffold0564 (2 HSPs)
scaffold0564 (132-218)||(9611-9697)
scaffold0564 (180-227)||(9711-9758)
[»] scaffold0081 (1 HSPs)
scaffold0081 (141-218)||(53947-54024)
[»] scaffold0058 (2 HSPs)
scaffold0058 (141-218)||(6925-7002)
scaffold0058 (230-269)||(7032-7071)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 26239081 - 26238946
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattt 234  Q
    |||||||||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  26239081 gtgacaaattataacattagggttccaaattaatatatttagggaagaaagagtcgttcatgagaaagaggagaaagagtcgttggaaattttgcaattt 26238982  T
Q  235 tctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||||||||||||||||    
T  26238981 tctgaaaatcaatcaatttggtccttggcaattttc 26238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7744194 - 7744068
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||    
T  7744194 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtattattttaacaaatcattcacacatcacataatcattgttaaacaaaca 7744095  T
Q  101 tttggcaaagggcagacatagaaagac 127  Q
    ||||||| |||||||||||||||||||    
T  7744094 tttggcagagggcagacatagaaagac 7744068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 26239505 - 26239382
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  26239505 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtattactttaacaaaccattcacacatcacataaccattgttaaacaaaca 26239406  T
Q  101 tttggcaaagggcagacatagaaa 124  Q
    ||||| | ||||||||||||||||    
T  26239405 tttggtagagggcagacatagaaa 26239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 41824313 - 41824182
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattt 234  Q
    |||||||||||| |||||||  || ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  41824313 gtgacaaattataacattagggtttcaaatatatatatttggggaagaaagagtcgttcatgagaaagaggagaaagagccgtcggtaattttgcaattt 41824214  T
Q  235 tctgaaaatcaatcaatttggtccttggcaat 266  Q
    |||||||||||||||||||| || ||||||||    
T  41824213 tctgaaaatcaatcaatttgatcattggcaat 41824182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 41824727 - 41824605
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  41824727 caattttcaccatcatcctatacaatcaaaagacaaaatcagtactattttaacaaaccattcacacatcacataaccattgttatacaaacctttggca 41824628  T
Q  108 aagggcagacatagaaagacctt 130  Q
     |||||||| |||||||| ||||    
T  41824627 gagggcagatatagaaaggcctt 41824605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 22273613 - 22273760
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt---gggaat---- 224  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||| ||||   | |||         
T  22273613 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagtcgttaatgagaaagagc 22273712  T
Q  225 --tttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
      || | |||||||| |||||| |||||||||||||||||||||||||    
T  22273713 cgttggcaattttctaaaaatccatcaatttggtccttggcaattttc 22273760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 5037780 - 5037863
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||| |||||||  || |||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  5037780 gtgacaaattataacattagggtttcaaatttatatatttagggaagaaagagccgttaatgaggaagaggagaaagagccgtt 5037863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 11720164 - 11720093
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||||||||| |||||    
T  11720164 aacaaaccattcacacatcacataaccattgttaaacaaaactttggcagagggcagacatagaaaaacctt 11720093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 41041434 - 41041367
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  41041434 cctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacacatcacataaccattgtt 41041367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 3152340 - 3152211
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||| |   |||||||||||||||||  ||||||||| || |||| |||||||||||          |||||||||||||| ||    
T  3152340 taggtgacaaattataacatcaaggttccaaatttatatattttgggaagaaatagccgttaatgagaaagagt---------cgttgggaattttgcaa 3152250  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  3152249 ttttctgaaaatcaatcaatttggtccttgataattttc 3152211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9672173 - 9672095
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcac 79  Q
    |||||| |||||||| ||| || | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  9672173 aaatttacaattttcaccatcatcttatacaatcaaaagacaaaatcagtactatttaaacaaaccattcacacatcac 9672095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 13484886 - 13484800
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| ||||||   |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||| ||||    
T  13484886 taggtgacaaattataacattaaggttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagtcgtt 13484800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 41041088 - 41041002
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||| ||||||||||||||    
T  41041088 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaagagaaagagccgtt 41041002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15307567 - 15307667
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| |||||| ||||||||    
T  15307567 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaaacatagaa 15307666  T
Q  124 a 124  Q
    |    
T  15307667 a 15307667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15487936 - 15488036
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| |||||| ||||||||    
T  15487936 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaaacatagaa 15488035  T
Q  124 a 124  Q
    |    
T  15488036 a 15488036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 42943142 - 42943225
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||| |||||||  |||||||||||||||||  || ||||||||| |||| ||||| |||||||||||||||||||    
T  42943142 gtgacaaattataacattagggttccaaatttatatatttgggaaagaaagagccgttaatgaggaagaggagaaagagccgtt 42943225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 27404993 - 27404893
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||    
T  27404993 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaa 27404894  T
Q  124 a 124  Q
    |    
T  27404893 a 27404893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 29238469 - 29238569
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||    
T  29238469 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaa 29238568  T
Q  124 a 124  Q
    |    
T  29238569 a 29238569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 40338522 - 40338463
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataa 83  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  40338522 cctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacgcatcacataa 40338463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 13283717 - 13283794
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| ||||||| ||||||||||||||||||  ||||| ||| |||| || ||||| |||||||||||||||||||    
T  13283717 aattataacattaggattccaaatttatatatttggggaataaatagtccttaatgaggaagaggagaaagagccgtt 13283794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 29694041 - 29694177
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaa-aga------ggagaaagagccgttgggaat 224  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||  |||| ||||||| |||       || |||||  ||||| ||||    
T  29694041 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagaaccgtttatgagaagagacgttggtgaaaaagatacgttgagaat 29694140  T
Q  225 tttgtaattttctgaaaatcaatcaatttggtccttg 261  Q
    ||||  |||||||| ||||||||||||||||||||||    
T  29694141 tttgcgattttctgtaaatcaatcaatttggtccttg 29694177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 13283321 - 13283417
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| |||||| |||||||||||||||    
T  13283321 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaaacatagaaagacctt 13283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 5037851 - 5037933
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||        ||||||||||||||||| |||||  |||||||| |||||||||    
T  5037851 agaaagagccgttaatgagaaagaggagaaagagccgttg--------gtaattttctgaaaatccatcaagctggtccttagcaattttc 5037933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 42943213 - 42943295
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||  |||||| |||        ||||| |||||||||||||||||||||||||    
T  42943213 agaaagagccgttaatgagaaagaggagaaagagccgttgacaattttctaa--------aaatccatcaatttggtccttggcaattttc 42943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 3152218 - 3152177
Alignment:
Q  229 taattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  3152218 taattttctgaaaatcaatcaatttagtcattggcaattttc 3152177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 13107171 - 13107094
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||| ||||    
T  13107171 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagtcgtt 13107094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 27692525 - 27692602
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || || || |||||||||||||||||||    
T  27692525 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaataaggaagaggagaaagagccgtt 27692602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 29237552 - 29237475
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  29237552 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 29237475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 33761470 - 33761393
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  33761470 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 33761393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 33762405 - 33762482
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  33762405 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 33762482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 35509615 - 35509538
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  35509615 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 35509538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 38548569 - 38548630
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||||||||    
T  38548569 ttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagccgtt 38548630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 41824148 - 41824111
Alignment:
Q  232 ttttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  41824148 ttttctgaaaatcaatcaatttgatccttggcaatttt 41824111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 13107567 - 13107471
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||||| ||||  ||||||||| ||||    
T  13107567 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcaaaaggcaagcatagaaaggcctt 13107471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 601499 - 601538
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  601499 aattttctgaaaatccatcaatttggtccttggaaatttt 601538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 8608498 - 8608459
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  8608498 aattttctgaaaatccatcaatttggtccttggaaatttt 8608459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 13107064 - 13107025
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  13107064 aattttctgaaaatccatcaatttggtccttggaaatttt 13107025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 13283824 - 13283863
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  13283824 aattttctgaaaatccatcaatttggtccttggaaatttt 13283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 15308056 - 15308095
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  15308056 aattttctgaaaatccatcaatttggtccttggaaatttt 15308095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 15488425 - 15488464
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  15488425 aattttctgaaaatccatcaatttggtccttggaaatttt 15488464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 27404504 - 27404465
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  27404504 aattttctgaaaatccatcaatttggtccttggaaatttt 27404465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 27692632 - 27692671
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  27692632 aattttctgaaaatctatcaatttggtccttggaaatttt 27692671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 29238982 - 29239021
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  29238982 aattttctgaaaatccatcaatttggtccttggaaatttt 29239021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 33761363 - 33761324
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  33761363 aattttctgaaaatccatcaatttggtccttggaaatttt 33761324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 33762512 - 33762551
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  33762512 aattttctgaaaatccatcaatttggtccttggaaatttt 33762551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 35509508 - 35509469
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  35509508 aattttctgaaaatccatcaatttggtccttggaaatttt 35509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 35510614 - 35510653
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  35510614 aattttctgaaaatccatcaatttggtccttggaaatttt 35510653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 8608589 - 8608528
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  ||||||||| || | || | ||| |||||||||||||||||||    
T  8608589 ttccaaatttatatatttggggaagaaatagcccttaacgaggaagaggagaaagagccgtt 8608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 15307949 - 15308026
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | |  ||||| ||| |||||||||||||||    
T  15307949 aattataacattagggttccaaatttatatatttggggaagaaatagccctaaatgaggaagtggagaaagagccgtt 15308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 15488318 - 15488395
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | |  ||||| ||| |||||||||||||||    
T  15488318 aattataacattagggttccaaatttatatatttggggaagaaatagccctaaatgaggaagtggagaaagagccgtt 15488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 35510507 - 35510584
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||| ||||    
T  35510507 aattataacattagggttccaaatttatatatttggggaagaaatagcctttaatgaggaagtggagaaagagtcgtt 35510584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 38548157 - 38548222
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||||    
T  38548157 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaac 38548222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 8608981 - 8608905
Alignment:
Q  54 attttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  ||||||||| ||||    
T  8608981 atttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaaggcctt 8608905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 17807368 - 17807308
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgtt 192  Q
    ||||||||||||||| | |||||  |||||||||||||||||   ||||||||||| ||||    
T  17807368 taggtgacaaattataaaattagggttccaaatttatatatttgtggaagaaagagacgtt 17807308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 41040981 - 41040941
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| ||||||||| |||||| ||||||||    
T  41040981 aattttctgaaaatccatcaatttgctccttgacaattttc 41040941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 43262002 - 43262030
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtcc 258  Q
    |||||||||||||||||||||||||||||    
T  43262002 aattttctgaaaatcaatcaatttggtcc 43262030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 38549897 - 38549763
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |||||||||||| ||    
T  38549897 taggtgacaaattataacattagggttccaaatttatatatttagggaagaaatagtcgttcatgagaaagaggagaaaaagccattgggaattttgcaa 38549798  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaat 266  Q
    |||||| ||||||||||||||||||||||||||||    
T  38549797 ttttctaaaaatcaatcaatttggtccttggcaat 38549763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38550317 - 38550188
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38550317 aaatttacaattttcaccatcatcctataaaatcaaaagacaaaatcagtactattttaacaaaccattcacacatcacataaccattgttaaacaaaca 38550218  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    |||||||  ||||| |||||||||| ||||    
T  38550217 tttggcagtgggcaaacatagaaaggcctt 38550188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 45360588 - 45360717
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||     
T  45360588 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacagaccattcgcacatcacataaccattgttaaacaaacc 45360687  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||| | ||||||||||||||||| ||||    
T  45360688 tttggaagagggcagacatagaaaggcctt 45360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48851343 - 48851214
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  48851343 aaatttacaattttcaccatcatcttatacaatcaaaagacaaaatcagtactatttaaacaaaccattcacacatcacataaccattgttaaccaaaca 48851244  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||  ||||||||| ||||    
T  48851243 tttggcagagggcaagcatagaaaggcctt 48851214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 6604699 - 6604821
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || |||||||||||||||||  |||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  6604699 caattttcaccatcatcctatacaatcaaaagataaaataagtactatttaaacaaactattcacacatcacataaccattgttaaacaaacctttggca 6604798  T
Q  108 aagggcagacatagaaagacctt 130  Q
     ||||||| ||||||||| ||||    
T  6604799 gagggcaggcatagaaaggcctt 6604821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 22155159 - 22155281
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || |||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||    
T  22155159 caattttcaccatcatcctatacaatcaaaggacaaattcagtactatttaaacaaaccattcacacatcacataaccattgttaaacaaaactttggca 22155258  T
Q  108 aagggcagacatagaaagacctt 130  Q
     ||| ||||||||||||| ||||    
T  22155259 gaggacagacatagaaaggcctt 22155281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 22211074 - 22211196
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || |||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||    
T  22211074 caattttcaccatcatcctatacaatcaaaggacaaattcagtactatttaaacaaaccattcacacatcacataaccattgttaaacaaaactttggca 22211173  T
Q  108 aagggcagacatagaaagacctt 130  Q
     ||| ||||||||||||| ||||    
T  22211174 gaggacagacatagaaaggcctt 22211196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 47385077 - 47384950
Alignment:
Q  3 atttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatt 102  Q
    |||| |||||||| |||  | ||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||  ||    
T  47385077 atttacaattttcaccattatcctgtacaatcaaaagacaaaatcagtaccatttaaacaaaccattcacacatcacataaccattgttaaacaaaactt 47384978  T
Q  103 tggcaaagggcagacatagaaagacctt 130  Q
    ||| | |||||| |||||||||| ||||    
T  47384977 tggaagagggcaaacatagaaaggcctt 47384950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 269
Target Start/End: Complemental strand, 47384660 - 47384515
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaatttt---- 227  Q
    ||||||||||||||| |||||||  ||||||||||||||| |  ||||||||| || |||| | ||||||||||||||| || |||||||||||||        
T  47384660 taggtgacaaattataacattagggttccaaatttatataattggggaagaaatagccgttaaagagaaagaggagaaatagtcgttgggaattttggtc 47384561  T
Q  228 ----gtaattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
        | |||||||||||||||||||||||||||||||| |||||||    
T  47384560 cttggcaattttctgaaaatcaatcaatttggtccttgacaatttt 47384515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 34775835 - 34775706
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || ||||||||| |||||||| |||||| |||||||| |||||||||||| ||||||| ||||| ||||||||||||||     
T  34775835 aaatttacaattttcaccatcatcctatacaaccaaaagacaaaatcaatactatttaaacaaaccattcgcacatcatataaccattgttaaacaaacc 34775736  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||| | |||| |  ||||||||| ||||    
T  34775735 tttggtagagggtatgcatagaaaggcctt 34775706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 34775417 - 34775334
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagcc 215  Q
    ||||| ||||||||| |||||||  ||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||    
T  34775417 taggtaacaaattataacattagggttccaaatttatatatttagggaagaaagagtagttaatgaggaagaggagaaagagcc 34775334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 13036254 - 13036398
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagag--------gagaaagagccgttgggaa 223  Q
    ||||||||||||||| | || || ||||||||||||||||||  |||||||||||| |||| |  ||||||||        || ||||||  ||||||||    
T  13036254 taggtgacaaattataaaataaggattccaaatttatatatttggggaagaaagagacgttgagaagaaagagatgttggggaaaaagagatgttgggaa 13036353  T
Q  224 ttttgtaattttctgaaaatcaatcaatttggtccttggcaattt 268  Q
     |||| ||||||||| ||||||||||||||||||||||| |||||    
T  13036354 atttgcaattttctgtaaatcaatcaatttggtccttggtaattt 13036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 269
Target Start/End: Complemental strand, 37792019 - 37791875
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaaga---------ggagaaagagccgttggga 222  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||  |||||||||||||||         ||| |||||   ||||| |    
T  37792019 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaaga--cgttcatgagaaagagatgttgggggaaaaagatatgttggaa 37791922  T
Q  223 attttgtaattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  37791921 attttgcaattttctgtaaatcaatcaagttggttcttggcaatttt 37791875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 38472990 - 38472907
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||| ||| || |||||||||||||||||| ||||||||| | ||| |||||| ||||||||||||||||||| ||||||    
T  38472990 caattttcaccatcatcctatacaatcaaaagacaaaatcagtattgtttaaacaaatcattcacacatcacataaccattgtt 38472907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 39858055 - 39857969
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||| ||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  39858055 taggtaacaaattataacattagggttccgaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 39857969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 24227270 - 24227201
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaa 93  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||  ||||||||    
T  24227270 cctatacaatcaaaagacaaaatcagtaatatttaaacaaatcattcacacatcacataatcattgttaa 24227201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35692222 - 35692093
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| | | || | |||||||||||||||| |||||| ||  |||| || ||| ||||||||||||||||||| ||||||||||||||     
T  35692222 aaatttacaattttcacaatcatcttatacaatcaaaagacaaaatcaatataatttaaagaaaacattcacacatcacataaccattgttaaacaaacc 35692123  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||  ||| |||||||  |||||||| ||||    
T  35692122 ttatgcagagggcaggaatagaaaggcctt 35692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 48227713 - 48227774
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||    
T  48227713 ttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagccgtt 48227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 13169380 - 13169504
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||| ||||||||| |||||||  | |||||||||||||||  ||||||||||||  ||| ||||| ||||||||||||||||||||        | ||    
T  13169380 taggtaacaaattataacattagggt-ccaaatttatatatttggggaagaaagagctgttaatgaggaagaggagaaagagccgttg--------gcaa 13169470  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaa 265  Q
    ||||||||||||| |||||||| |||||||||||    
T  13169471 ttttctgaaaatccatcaatttagtccttggcaa 13169504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 45361007 - 45361131
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||| ||||||||| |||||||  ||||||||||| |||||  |||||||||||| |||| |||||  |||||||||||||| ||||        | ||    
T  45361007 taggtaacaaattataacattagggttccaaattta-atatttggggaagaaagagccgttaatgagggagaggagaaagagctgttg--------gcaa 45361097  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaa 265  Q
    ||||||||||||| ||||||||||||||||||||    
T  45361098 ttttctgaaaatccatcaatttggtccttggcaa 45361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 46438374 - 46438291
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||| ||| || || || |||||||||||| || |||||||||||| |||||| ||||||||||||||||||| ||||||    
T  46438374 caattttcaccatcatccaatgcaatcaaaagacaaattcagtactatttaaacaaatcattcacacatcacataaccattgtt 46438291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 77309 - 77407
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| |||||||| | | || |||||||||||||||||| |||||||||  |||| |||||| |||||| |||| | ||||| ||||||||||||||    
T  77309 aaatttacaattttcacaatcatcctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacattaaataaccattgttaaacaaac 77407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 270
Target Start/End: Complemental strand, 24226923 - 24226801
Alignment:
Q  139 caaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctg 238  Q
    |||||||| |||||||  || ||||||||||||||  |||||||||||| |||| ||||| |||||||||||||  |||||        | |||||||||    
T  24226923 caaattataacattagggtttcaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaaga-tcgttg--------gcaattttctg 24226833  T
Q  239 aaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||| |||||||||||||||| ||||||||    
T  24226832 aaaatccatcaatttggtccttgacaattttc 24226801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 23904969 - 23904886
Alignment:
Q  136 tgacaaattattacattagcattccaaatttatatattcaggg-aagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||| |||||||  |||||||||||||||||  ||| |||||||||||||| || || |||||||||||||| ||||    
T  23904969 tgacaaattataacattagggttccaaatttatatatttgggggaagaaagagtcgttaataaggaagaggagaaagagtcgtt 23904886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 46438008 - 46437925
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||| ||||||| |||||||  |||||||||||||||||  ||||||||| ||| ||| ||||| |||| ||||||||||||||    
T  46438008 gtgataaattataacattagggttccaaatttatatatttggggaagaaatagttgttaatgaggaagaagagaaagagccgtt 46437925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 29995279 - 29995201
Alignment:
Q  140 aaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||||||||    
T  29995279 aaattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagccgtt 29995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 38472627 - 38472541
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| ||||||   |||||||||||||||||  ||||| ||||| ||||| ||||| || |||||||| |||||||    
T  38472627 taggtgacaaattataacattaaggttccaaatttatatatttggggaataaagaatcgttaatgaggaaaaggagaaaaagccgtt 38472541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 46437937 - 46437854
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttca 271  Q
    |||||||| |||| ||||||| ||||||||||||||||||| ||||||        ||||||||| ||||||||||||||| ||||||||||    
T  46437937 agaaagagccgttaatgagaatgaggagaaagagccgttggcaatttt--------ctgaaaatccatcaatttggtcctttgcaattttca 46437854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 77737 - 77814
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||||||||    
T  77737 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagccgtt 77814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 20479408 - 20479485
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  20479408 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 20479485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 27664809 - 27664732
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||||||||    
T  27664809 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagccgtt 27664732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 22211602 - 22211642
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22211602 aattttctgaaaatccatcaatttggtccttggcaattttc 22211642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 35691687 - 35691647
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  35691687 aattttctgaaaatccatcaatttggtccttggcaattttc 35691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 22155575 - 22155657
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||| ||||||   |||||| ||||||||||  ||||||||||||  ||| ||||| |||||||||||||||||||    
T  22155575 gtgacaaattataacattaaggttccaa-tttatatatttggggaagaaagagatgttaatgaggaagaggagaaagagccgtt 22155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 22211490 - 22211572
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||| ||||||   |||||| ||||||||||  ||||||||||||  ||| ||||| |||||||||||||||||||    
T  22211490 gtgacaaattataacattaaggttccaa-tttatatatttggggaagaaagagatgttaatgaggaagaggagaaagagccgtt 22211572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 23904898 - 23904859
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttg 219  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  23904898 agaaagagtcgttaatgagaaagaggagaaagagccgttg 23904859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 35691800 - 35691717
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| |||||| |||||||  ||| |||||||||||||  ||||||||| | ||||| ||||| |||||||||||| ||||||    
T  35691800 gtgacgaattataacattagggttcaaaatttatatatttggggaagaaacaatcgttaatgaggaagaggagaaagcgccgtt 35691717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 39857905 - 39857866
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  39857905 aattttctgaaaatccatcaatttggtccttggcaatttt 39857866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 6605226 - 6605266
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  6605226 aattttctgaaaatccatcaatttggtccttgacaattttc 6605266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 22155687 - 22155727
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  22155687 aattttctgaaaatccataaatttggtccttggcaattttc 22155727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 34775343 - 34775266
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaa 265  Q
    |||||||| | || |||||||| |||||||||||||||||| ||||||        ||||||||| ||||||||||||||||||||    
T  34775343 agaaagagccattaatgagaaaaaggagaaagagccgttggcaatttt--------ctgaaaatccatcaatttggtccttggcaa 34775266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 38472520 - 38472480
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  38472520 aattttctgaaaatccatcaatttggtccttgacaattttc 38472480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 29995171 - 29995132
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  29995171 aattttctgaaaatccatcaatttggtccttggaaatttt 29995132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 35403414 - 35403453
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  35403414 aattttctgaaaatccatcaatttggtccttggaaatttt 35403453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 48227762 - 48227801
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttg 219  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  48227762 agaaagagccgttaatgagaaagaggagaaagagccgttg 48227801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 7403224 - 7403290
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaag 125  Q
    ||||||||||||  |||||||| || ||| ||||||||||| ||||||| ||||||  |||||||||    
T  7403224 aacaaaccattcggacatcacacaattatggttaaacaaacctttggcagagggcaaccatagaaag 7403290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 37114240 - 37114161
Alignment:
Q  183 aagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||| |||| |||||||||||||||||||||| |||| ||||||        ||||||||| ||||||||| || ||||||||||||    
T  37114240 aagagccgttaatgagaaagaggagaaagagccattggcaatttt--------ctgaaaatccatcaatttgatcattggcaattttc 37114161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 48311536 - 48311590
Alignment:
Q  206 agaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtcctt 260  Q
    |||||||| ||||||| | |||| ||||||||  |||||||||||||||||||||    
T  48311536 agaaagagacgttggggaatttgcaattttctttaaatcaatcaatttggtcctt 48311590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 35403307 - 35403384
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || || || ||| |||||||||||||||    
T  35403307 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaataaggaagtggagaaagagccgtt 35403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 37114306 - 37114236
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagag 204  Q
    ||||||||||||||| |||||||  ||||||||||  |||||  |||||||||||| |||| ||||| |||||    
T  37114306 taggtgacaaattataacattagggttccaaattt--atatttggggaagaaagagccgttaatgaggaagag 37114236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 6605110 - 6605162
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaa 184  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||    
T  6605110 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 20479515 - 20479547
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  20479515 aattttctgaaaatccatcaatttggtccttgg 20479547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 38549761 - 38549725
Alignment:
Q  234 ttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||| |||||||| |||||||||||||    
T  38549761 ttctgaaaatcaatgaatttggttcttggcaattttc 38549725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 54387615 - 54387752
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||| | |||||||  ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| || ||||||||||| ||    
T  54387615 taggtgacaaattgtaacattagggttccaaatttatatatttagggcagaaagagtcgttcttgagaaagaggagaaagagtcg-tgggaattttgcaa 54387713  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54387714 ttttctgaaaatcaatcaatttggtccttggcaattttc 54387752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 54387202 - 54387320
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||||||      |||||||||| || ||||||||||||    
T  54387202 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactattttaacaaaccat------atcacataaccatcgttaaacaaaca 54387295  T
Q  101 tttggcaaagggcagacatagaaag 125  Q
    ||||||| |||||||||||||||||    
T  54387296 tttggcatagggcagacatagaaag 54387320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48645810 - 48645674
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataa-------ctattgttaa 93  Q
    |||||| |||||||| ||| || |||||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||       | ||||||||    
T  48645810 aaatttacaattttcaccatcatcctatacaatcaaaaggcaaaatcagtactattttaacaaatcattcacacatcgcataaccattgtccattgttaa 48645711  T
Q  94 acaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  48645710 acaaacttttggcagagggcagacatagaaagacctt 48645674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35402540 - 35402419
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || ||||||   ||||||||| ||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||     
T  35402540 aaatttacaattttcaccatcatcctata---tcaaaagacaaaatcagtactatttaaacaaaccattgacacatcacatgaccattgttaaacaaacc 35402444  T
Q  101 tttggcaaagggcagacatagaaag 125  Q
    ||||||| ||||||| |||||||||    
T  35402443 tttggcagagggcaggcatagaaag 35402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41760472 - 41760382
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  41760472 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacacatcacataaccattgtt 41760382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 49524473 - 49524602
Alignment:
Q  133 aggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaat 232  Q
    |||||||||||||| |||||||  ||||||||||||||| |  ||||||||||||||||| ||||||||||| ||||||||||||||          |||    
T  49524473 aggtgacaaattataacattagggttccaaatttatatacttggggaagaaagagtcgttaatgagaaagagaagaaagagccgttg--------acaat 49524564  T
Q  233 tttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||| |||||| |||||||||||||||| ||||||||    
T  49524565 tttctcaaaatccatcaatttggtccttgacaattttc 49524602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 48645576 - 48645509
Alignment:
Q  203 aggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  48645576 aggagaaagagccgttggaaattttgcaattttctgaaaatcaatcaatttgttccttggcaattttc 48645509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11254803 - 11254721
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataa 83  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  11254803 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacacatcacataa 11254721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 2692116 - 2692029
Alignment:
Q  43 aaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||||||| |||| |||||||||||||||||||||||||  |||||||||||||| ||||||| |||| ||||||| |||| ||||    
T  2692116 aaatcagtacaatttaaacaaaccattcacacatcacataatcattgttaaacaaacctttggcagagggaagacataaaaaggcctt 2692029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 35402125 - 35402039
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||| ||||    
T  35402125 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagtcgtt 35402039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 11641348 - 11641465
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || |||||||||  ||||  | |||||||||| |||| || ||||||||||||||||||||||| ||||||||| |||| |||| ||    
T  11641348 caattttcaccatcatcctatacaaagaaaattcaaaatcagtacaatttaaaaaaaccattcacacatcacataaccattgttaaataaacctttgaca 11641447  T
Q  108 aagggcagacatagaaag 125  Q
     |||| ||||||||||||    
T  11641448 gagggaagacatagaaag 11641465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 11254434 - 11254347
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttg 219  Q
    ||||||||||||||| |||||||  || ||||||||||||||  ||||||||||||  ||| ||||| ||||||||||||||||||||    
T  11254434 taggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagctgttaatgaggaagaggagaaagagccgttg 11254347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 2691740 - 2691602
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaaga---------ggagaaagagccgttggga 222  Q
    ||||||||||||||| |||||||  |||||||||||||||||  |||||||||||| ||||  |||||||||         ||| |||||  | ||| ||    
T  2691740 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagccgtttgtgagaaagagacgttgggggaaaaagatacattgaga 2691641  T
Q  223 attttgtaattttctgaaaatcaatcaatttggtccttg 261  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  2691640 attttgcaattttctgtaaatcaatcaatttggtccttg 2691602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51013179 - 51013277
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| |||||||| | | || |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||  ||||||||||||||    
T  51013179 aaatttacaattttcacaatcatcctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataatcattgttaaacaaac 51013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 11641860 - 11641925
Alignment:
Q  205 gagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||| |||||| ||||||| ||||| ||| |||||||||||||||||||||| ||||||||    
T  11641860 gagaaagagacgttggaaattttgcaatttcctgtaaatcaatcaatttggtccttgacaattttc 11641925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 42981874 - 42981937
Alignment:
Q  28 tacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||||||| | ||||||||||||||| || ||| ||||||||||||||||||| ||||||    
T  42981874 tacaatcaaaaggcaaaatcagtactatttaaataaatcattcacacatcacataaccattgtt 42981937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 20494176 - 20494115
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  ||||||||||||||||| ||||  |||||||||||||| ||||    
T  20494176 ttccaaatttatatatttggggaagaaagagtcgttaatgaagaagaggagaaagagtcgtt 20494115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 35402051 - 35401969
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||| ||||||||||| ||||||||||||||        | |||||| |||||||| ||||||||||| |||||||||||||    
T  35402051 agaaagagtcgttaatgagaaagagaagaaagagccgttg--------gcaattttatgaaaatccatcaatttggtgcttggcaattttc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 833998 - 833906
Alignment:
Q  32 atcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaa 124  Q
    |||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  ||||||||    
T  833998 atcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaa 833906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 320588 - 320665
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  320588 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 42982196 - 42982249
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagt 188  Q
    |||||||||||| |||||||  |||||||||||||||||  |||||||||||||    
T  42982196 gtgacaaattataacattagggttccaaatttatatatttggggaagaaagagt 42982249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 43520797 - 43520874
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || || || |||||||||||||||||||    
T  43520797 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaataaggaagaggagaaagagccgtt 43520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 48645515 - 48645475
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  48645515 aattttctgaaaatcaatcaatttgatccttgacaattttc 48645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 320695 - 320734
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  320695 aattttctgaaaatccatcaatttggtccttggaaatttt 320734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 833517 - 833478
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  833517 aattttctgaaaatccatcaatttggtccttggaaatttt 833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 834837 - 834876
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  834837 aattttctgaaaatccatcaatttggtccttggaaatttt 834876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 4614843 - 4614914
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    ||||||||||||  ||||||||||||  || |||||||||| |||||||||||| |  ||||||||| ||||    
T  4614843 aacaaaccattctgacatcacataaccctttttaaacaaacctttggcaaagggaaagcatagaaaggcctt 4614914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 5438105 - 5438066
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  5438105 aattttctgaaaatccatcaatttggtccttggaaatttt 5438066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 20494087 - 20494048
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  20494087 aattttctgaaaatccatcaatttggtccttgccaatttt 20494048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 28101296 - 28101225
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    ||||||||||||  |||||||| ||  || ||||||||||| ||||||| |||||| ||||||||| |||||    
T  28101296 aacaaaccattctgacatcacacaataatggttaaacaaacttttggcagagggcaaacatagaaatacctt 28101225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 33264677 - 33264638
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  33264677 aattttctgaaaatccatcaatttggtccttggaaatttt 33264638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 33265805 - 33265844
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  33265805 aattttctgaaaatccatcaatttggtccttggaaatttt 33265844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 43507461 - 43507422
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  43507461 aattttctgaaaatccatcaatttggtccttggaaatttt 43507422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 43508448 - 43508487
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  43508448 aattttctgaaaatccatcaatttggtccttggaaatttt 43508487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 4173435 - 4173505
Alignment:
Q  148 acattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  4173435 acattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 4173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 4172513 - 4172436
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||| ||||    
T  4172513 aattataacattagggttccaaatttatatatttggggaagaaatagcctttaatgaggaagtggagaaagagtcgtt 4172436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 5438212 - 5438135
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | |  ||||| ||| |||||||||||||||    
T  5438212 aattataacattagggttccaaatttatatatttggggaagaaatagccttaaatgaggaagtggagaaagagccgtt 5438135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 33264784 - 33264707
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |  | || ||||| ||| |||||||||||||||    
T  33264784 aattataacattagggttccaaatttatatatttggggaagaaatatcccttaatgaggaagtggagaaagagccgtt 33264707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 33265698 - 33265775
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||| ||||    
T  33265698 aattataacattagggttccaaatttatatatttggggaagaaatagcctttaatgaggaagtggagaaagagtcgtt 33265775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 43508341 - 43508418
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  || |||||| || | || ||||| ||| |||||||||||||||    
T  43508341 aattataacattagggttccaaatttatatatttgggaaagaaatagcccttaatgaggaagtggagaaagagccgtt 43508418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 5438961 - 5439053
Alignment:
Q  32 atcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaa 124  Q
    |||||||||| |||||||||  |||| ||||||  ||| | |||||| ||||| |||||||||||||| ||  ||| ||||||  ||||||||    
T  5438961 atcaaaagacaaaatcagtataatttaaacaaaatatttatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaa 5439053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 41759656 - 41759604
Alignment:
Q  160 caaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaaga 212  Q
    ||||||||||||||  || ||||||||| |||| | |||||||||||||||||    
T  41759656 caaatttatatatttgggaaagaaagagccgttaacgagaaagaggagaaaga 41759604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6902211 - 6902340
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| ||| |||| ||| || |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  6902211 aaatttacaaatttcaccatcatcctatacaatcaaaagacaaaatcagttctattttaacaaaccattcacacatcacataaccaatgttaaacaaaca 6902310  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||||||||||||||||||    
T  6902311 tttggcagagggcagacatagaaagacctt 6902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7050820 - 7050949
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||     
T  7050820 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcaatactattttaacaaaccattcacacatcgcataaccattgttaaacaaacc 7050919  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    | |||||||| |||||||||||||| ||||    
T  7050920 tatggcaaagagcagacatagaaaggcctt 7050949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10569461 - 10569583
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||     
T  10569461 aaatttacaattttcaccatcatcctgtacaatcaaaagacaaaatcagtactattttaacaaaccattcacacatcgcataaccattgttaaacaaacc 10569560  T
Q  101 tttggcaaagggcagacatagaa 123  Q
    ||||||| | |||||||||||||    
T  10569561 tttggcagatggcagacatagaa 10569583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11356447 - 11356571
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || | |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||  |||||||||||||     
T  11356447 aaatttacaattttcaccatcatcatatacaatcaaaagacaaaataagtactatttaaacaaaccattcacacatcacataacctttgttaaacaaacc 11356546  T
Q  101 tttggcaaagggcagacatagaaag 125  Q
    ||||||| |||||||||||||||||    
T  11356547 tttggcagagggcagacatagaaag 11356571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 21091443 - 21091314
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||| ||||||| ||    
T  21091443 taggtgacaaattataacattagagttccaaatttatatatttagggaagaaagagtcgttcatgagaa---------agagccgttggaaattttgcaa 21091353  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  21091352 ttttatgaaaatcaatcaatttggtccttgacaattttc 21091314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 9399393 - 9399499
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||  |||||||    
T  9399393 cctatacaatcaaaagacaaaattagtactatttaaacaaaccattcacacattacataaccattgttaaacaaatctttggcaaagggcaagcatagaa 9399492  T
Q  124 agacctt 130  Q
    || ||||    
T  9399493 aggcctt 9399499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 21045694 - 21045564
Alignment:
Q  131 ataggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgta 230  Q
    |||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||||||||||||||||         |||| |||||| ||||||| |    
T  21045694 ataggtgacaaattataaaattagatttccaaatttatatatttagggaagaaagagtcgttcatgagaa---------agagtcgttggaaattttgca 21045604  T
Q  231 attttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||| |||||||||||||||||| | |||| ||||||||    
T  21045603 attttatgaaaatcaatcaatttgattcttgacaattttc 21045564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 7051044 - 7051114
Alignment:
Q  200 aagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  7051044 aagaggagaaatagccgttgggaattttgcaattttctgaaaatcaatcaatttgttccttggcaattttc 7051114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 7371508 - 7371422
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||| ||||    
T  7371508 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagtcgtt 7371422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 10569684 - 10569754
Alignment:
Q  200 aagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  10569684 aagaggagaaagagtcgttgggaattttacaattttctgaaaatcaatcaatttgttccttggcaattttc 10569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 21069008 - 21068879
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||||||||||||||||         |||| |||||| ||||||  ||    
T  21069008 taggtgacaaattataaaattagatttccaaatttatatatttagggaagaaagagtcgttcatgagaa---------agagtcgttggaaatttttcaa 21068918  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||| |||||||||||||||||| | |||| ||||||||    
T  21068917 ttttgtgaaaatcaatcaatttgattcttgacaattttc 21068879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 6902703 - 6902767
Alignment:
Q  206 agaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6902703 agaaagagtcgttgggaattttgtaattttctgaaaatcaatcaatttagtccttgacaattttc 6902767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 11356866 - 11356952
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  11356866 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 11356952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 7371849 - 7371766
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||| ||| ||  ||||||||||||||||| ||||||||||||||| |||||| ||||||||  ||||||||||||||||    
T  7371849 caattttcaccatcattctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacatgtcacataactattgtt 7371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 32437931 - 32437825
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||    
T  32437931 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaa 32437832  T
Q  124 agacctt 130  Q
    || ||||    
T  32437831 aggcctt 32437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 33267776 - 33267691
Alignment:
Q  45 atcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||| || || |||  |||| |||||||||    
T  33267776 atcaatactatttaaacaaaccattcacacatcacataaccattgttaaacaaacctttgacatagagcaagcataaaaagacctt 33267691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20524679 - 20524769
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || ||||||||| || ||||| ||||  ||||||||| |||||| ||||||||||||||||||| ||||||    
T  20524679 aaatttacaattttcaccatcatcctatacaagcagaagacaaaatttgtactatttaaacaaatcattcacacatcacataaccattgtt 20524769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 33267394 - 33267321
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagagg 205  Q
    ||||||||||||||| |||||||  |||||||||| ||||||  ||||||||| || |||||||||||||||||    
T  33267394 taggtgacaaattataacattagggttccaaatttgtatatttggggaagaaaaagccgttcatgagaaagagg 33267321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 6902659 - 6902715
Alignment:
Q  136 tgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgtt 192  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||    
T  6902659 tgacaaattataacattagggttccaaatttatatatttagggaagaaagagtcgtt 6902715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 21068885 - 21068845
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21068885 aattttctgaaaatcaatcaatttggtccttggcaattttc 21068845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 20525048 - 20525133
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||| ||  || |||||| |||||||  ||||||||||||||||| ||||| |||||||||||||| ||||    
T  20525048 taggtgacaaattataacatcagggtttcaaatt-atatatttggggaagaaagagtcgttaatgaggaagaggagaaagagtcgtt 20525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 13611047 - 13610970
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |  |||| ||||| |||||||||||||||||||    
T  13611047 aattataacattagggttccaaatttatatatttggggaagaaataaccgttaatgaggaagaggagaaagagccgtt 13610970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 18644558 - 18644631
Alignment:
Q  26 tatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||||||||||||| |||||||||  |||| |||||| |||||| | |||| ||||| ||||||||||||||    
T  18644558 tatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatatatcaaataacaattgttaaacaaac 18644631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 10569748 - 10569788
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  10569748 aattttctgaaaatcaatcaatttggtctttggcaattttc 10569788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 21045570 - 21045531
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  21045570 aattttctgaaaatcaatcaatttggtccttgacaatttt 21045531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 33277066 - 33277012
Alignment:
Q  216 gttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||  ||||||||    
T  33277066 gttggaaattttgcaattttctgaaaatcaatcaatttgatcctttacaattttc 33277012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 20525121 - 20525199
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaat 266  Q
    ||||||||||||| |||||||||||||||||||||| |||          ||||||||||||||| |||||||||||| ||||||||    
T  20525121 agaaagagtcgttaatgagaaagaggagaaagagccattg--------acaattttctgaaaatccatcaatttggtcattggcaat 20525199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 9399767 - 9399839
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagag 204  Q
    ||||||||||||||| |||||||  ||||||||||||||| |  |||||||||||  |||| | |||||||||    
T  9399767 taggtgacaaattataacattagggttccaaatttatataattggggaagaaagatccgttaaagagaaagag 9399839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 9399864 - 9399904
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  9399864 aattttctgaaaatcaatcaatttgatccttgacaattttc 9399904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 11356940 - 11357017
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaa 265  Q
    |||||||| |||| |||| ||||||||||||||| |||||| ||||        ||||||||||| ||||||||||||||||||||    
T  11356940 agaaagagccgttaatgataaagaggagaaagagtcgttggcaatt--------ttctgaaaatccatcaatttggtccttggcaa 11357017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 11357025 - 11357065
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  11357025 aattttctgaaattccatcaatttggtccttggcaattttc 11357065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 13610940 - 13610901
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  13610940 aattttctgaaaatccatcaatttggtccttggaaatttt 13610901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 32518292 - 32518331
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  32518292 aattttctgaaaatccatcaatttggtccttggaaatttt 32518331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 3480453 - 3480485
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  3480453 aattttctgaaaatccatcaatttggtccttgg 3480485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 52642699 - 52642570
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||     
T  52642699 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactattttaacaaaccattgacacatcacataaccattgttaaacaaacc 52642600  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||||||||||||| ||||    
T  52642599 tttggcagagggcagacatagaaaggcctt 52642570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 50554975 - 50554851
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||     
T  50554975 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaaccattcgcacatcacataactattgttaaacaaacc 50554876  T
Q  101 tttggcaaagggcagacatagaaag 125  Q
    ||||||| |||||||||||||||||    
T  50554875 tttggcagagggcagacatagaaag 50554851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 52642277 - 52642142
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattt 234  Q
    ||||| |||||| |||||||  || ||||||||||||||  |||||||||||||||||||||||||||||||||||| |  ||||| ||||||| |||||    
T  52642277 gtgactaattataacattagggttacaaatttatatatttggggaagaaagagtcgttcatgagaaagaggagaaagtgttgttggaaattttgcaattt 52642178  T
Q  235 tctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||| || |||||||||||||||    
T  52642177 tctgaaaatcaatcaatctgttccttggcaattttc 52642142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 6817666 - 6817544
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggca 107  Q
    |||||||| ||| || | |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  6817666 caattttcaccatcatcatatacaatcaaaagacaaaattagtactatttaaacaaaccattcacacatcacataatcattgttaaacaaacatttggca 6817567  T
Q  108 aagggcagacatagaaagacctt 130  Q
     ||||||||||||||||| ||||    
T  6817566 gagggcagacatagaaaggcctt 6817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15105698 - 15105796
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| |||||||| ||| || |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  15105698 aaatttacaattttcaccatcatcctatacaatcaaaagaaaaaatcagtactatttaaacaaaccattcacacatcacataaccattgttaaataaac 15105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 37087483 - 37087571
Alignment:
Q  3 atttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  37087483 atttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaagcattcacacatcacataaccattgtt 37087571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 33600015 - 33599886
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| | | || |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||||     
T  33600015 aaatttacaattttcacaatcatcctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaacc 33599916  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||  ||  |||||| |||||||||||||||    
T  33599915 ttatgctgagggcaaacatagaaagacctt 33599886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 15106064 - 15106165
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    |||||||| |||||| ||||||| ||||||||||||||||||  ||||||||| || |||| |||||  |||||||||||||||||||| ||||||| ||    
T  15106064 taggtgacgaattataacattaggattccaaatttatatatttggggaagaaatagccgttaatgag--agaggagaaagagccgttggaaattttgcaa 15106161  T
Q  232 tttt 235  Q
    ||||    
T  15106162 tttt 15106165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 50554556 - 50554431
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||||  ||| ||||| |||| |||||||||||||||        | ||    
T  50554556 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagctgttaatgaggaagatgagaaagagccgttg--------gcaa 50554465  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaa 265  Q
    ||||||||||||| ||||||||||||||||||||    
T  50554464 ttttctgaaaatccatcaatttggtccttggcaa 50554431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 27088563 - 27088667
Alignment:
Q  26 tatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaag 125  Q
    |||||||||||||||| |||||||||  |||| |||||| |||||| |||||| |||||||||||||||||||| ||  ||| ||||||  |||||||||    
T  27088563 tatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataactattgttaaacaaaccttatgcagagggcaagcatagaaag 27088662  T
Q  126 acctt 130  Q
     ||||    
T  27088663 gcctt 27088667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 31237556 - 31237485
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||||    
T  31237556 aacaaaccatttacacatcacatagccattgttaaacaaacctttggcagagggcagacatagaaaggcctt 31237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 2870789 - 2870875
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  ||||||||| |||||||  || ||||||||| |||| ||||| |||||||||||||||||||    
T  2870789 taggtgacaaattataacattagggttccaaattgatatatttgggaaagaaagagccgttaatgaggaagaggagaaagagccgtt 2870875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 6817255 - 6817169
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  ||| |||||||||||||  ||||||||||||||||| ||||| |||||||||||||| ||||    
T  6817255 taggtaacaaattataacattagggttctaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagtcgtt 6817169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 31237195 - 31237109
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  ||||||| |||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  31237195 taggtaacaaattataacattagggttccaaaattatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 31237109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 51894943 - 51894857
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||| ||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| ||||||||||||| |||||    
T  51894943 taggtgacaaaatataacattagagttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagaaccgtt 51894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 26224394 - 26224293
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||    
T  26224394 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaa 26224295  T
Q  124 ag 125  Q
    ||    
T  26224294 ag 26224293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 45045284 - 45045140
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt---------gggaatt 225  Q
    |||| ||||||| |||||||  |||||||||||||||||  ||||||||||||| ||| ||||| |||||| ||||||||||||         | |   |    
T  45045284 gtgataaattataacattagggttccaaatttatatatttggggaagaaagagttgttaatgaggaagaggggaaagagccgttaatgataaagagtcgt 45045185  T
Q  226 ttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    | ||||||||||||||||| ||||||||||| |||||||||||||    
T  45045184 tggtaattttctgaaaatccatcaatttggttcttggcaattttc 45045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 3012157 - 3012075
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||        | ||||||||||||||| ||||||||||||||| |||||||||    
T  3012157 agaaagagccgttaatgagaaagaggagaaagagccgttg--------gcaattttctgaaaatccatcaatttggtccttagcaattttc 3012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 3012233 - 3012145
Alignment:
Q  130 tataggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||||  |||||||  |||||||||||||||||  ||||||||||||  ||| ||  | |||||||||||||||||||    
T  3012233 tataggtgacaaattagaacattagggttccaaatttatatatttggggaagaaagagcggttaatacggaagaggagaaagagccgtt 3012145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 37087849 - 37087935
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| ||  |||  |||||||||||||||||  |||||||||||  |||| ||||| |||| ||||||||||||||    
T  37087849 taggtgacaaattataacgatagggttccaaatttatatatttggggaagaaagatccgttaatgaggaagatgagaaagagccgtt 37087935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 1443870 - 1443947
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  1443870 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 1443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 9120439 - 9120362
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  9120439 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 9120362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 42558649 - 42558592
Alignment:
Q  73 acatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||||||||| |||||||||||||| ||||||||||||||  ||||||||| ||||    
T  42558649 acatcacataaccattgttaaacaaacctttggcaaagggcaagcatagaaaggcctt 42558592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 47011856 - 47011779
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  47011856 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 47011779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 50554423 - 50554384
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  50554423 aattttctgaaaatccatcaatttggtccttggcaatttt 50554384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 2870863 - 2870945
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| |||||||||||||||||||| || ||| |||||| |        ||||||| |||||||||||||||||||||||||    
T  2870863 agaaagagccgttaatgagaaagaggagaaagagtcggtggcaattttat--------gaaaatccatcaatttggtccttggcaattttc 2870945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 8168342 - 8168265
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  8168342 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 8168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 20944778 - 20944855
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  20944778 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 20944855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 34776936 - 34776859
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||| ||||    
T  34776936 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagtcgtt 34776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 51894869 - 51894787
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||  |||| ||||||||||||||||||||||||||        | ||||||||||||||| |||||||||||| ||| ||||||||    
T  51894869 agaaagaaccgttaatgagaaagaggagaaagagccgttg--------gcaattttctgaaaatccatcaatttggtcgttgacaattttc 51894787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 31237121 - 31237040
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||||| |||| ||||||||  ||||||||||||||||||||        ||||||||||||| || ||||||||||||| |||||||    
T  31237121 agaaagagccgttaatgagaaacgggagaaagagccgttgggaa--------ttttctgaaaatccattaatttggtccttgacaatttt 31237040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 34777331 - 34777235
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  ||||||||| ||||    
T  34777331 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaaggcctt 34777235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 6817105 - 6817070
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaa 265  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6817105 aattttctgaaaatccatcaatttggtccttggcaa 6817070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 8168235 - 8168196
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  8168235 aattttctgaaaatccatcaatttggtccttggaaatttt 8168196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 8169363 - 8169402
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  8169363 aattttctgaaaatccatcaatttggtccttggaaatttt 8169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 25277070 - 25277031
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  25277070 aattttctgaaaatccatcaatttggtccttggaaatttt 25277031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 27089074 - 27089113
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  27089074 aattttctgaaaatccatcaatttggtccttggaaatttt 27089113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 33599478 - 33599439
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  33599478 aattttctgaaaatccatcaatttggtccttggaaatttt 33599439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 34776829 - 34776790
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  34776829 aattttctgaaaatccatcaatttggtccttggaaatttt 34776790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 37345757 - 37345796
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  37345757 aattttctgaaaatccatcaatttggtccttggaaatttt 37345796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 8169256 - 8169333
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  ||||||||||||||||   ||||||||| || | || ||||| ||| |||||||||||||||    
T  8169256 aattataacattagggttccaaatttatatatctggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 8169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 37087923 - 37088005
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| |||||||||||||||||||| |||||  |||||| |||        |||||||||||||||| ||||| ||||||||    
T  37087923 agaaagagccgttaatgagaaagaggagaaagagtcgttgacaattttctaa--------aaatcaatcaatttggcccttgacaattttc 37088005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 1443977 - 1444009
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  1443977 aattttctgaaaatccatcaatttggtccttgg 1444009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 9120332 - 9120300
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  9120332 aattttctgaaaatccatcaatttggtccttgg 9120300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 46582349 - 46582273
Alignment:
Q  143 ttattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttg 219  Q
    |||| |||||||  |||||||||||||||||  ||||||||| |  | || ||||| ||| ||||||||||||||||    
T  46582349 ttataacattagggttccaaatttatatatttggggaagaaataacccttaatgaggaagtggagaaagagccgttg 46582273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 258
Target Start/End: Complemental strand, 52642114 - 52642086
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtcc 258  Q
    |||||||||||||||||||||||||||||    
T  52642114 aattttctgaaaatcaatcaatttggtcc 52642086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 52642148 - 52642108
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||| || | |||||||    
T  52642148 aattttctgaaaatcaatcaatttggtcattagaaattttc 52642108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 51685672 - 51685801
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  51685672 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcggtactattttaacaaaccattcacacgtcacataaccattgttaaacaaacc 51685771  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||||||||||||| ||||    
T  51685772 tttggcagagggcagacatagaaaggcctt 51685801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 51686091 - 51686229
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  ||  |||||||||||||  |||||||||  ||||||||||||||||||||||||| |  ||||||||||||| ||    
T  51686091 taggtgacaaattataacattagggttagaaatttatatatttggggaagaaaatgtcgttcatgagaaagaggagaaagggtagttgggaattttgcaa 51686190  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  51686191 ttttctgaaaatcaatcaatttgttccttggcaattttc 51686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 42281794 - 42281923
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||  || ||||||||||||    
T  42281794 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactattttaacaaaccattcgcacatcaaataatcatcgttaaacaaaca 42281893  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||| ||||||||||||| ||||    
T  42281894 tttggcagaggtcagacatagaaaggcctt 42281923  T

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Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 42282216 - 42282342
Alignment:
Q  135 gtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattt 234  Q
    |||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||| |||||    
T  42282216 gtgacaaattataacattagggttccaaatttatatatttagggaagaaagagtcgttcat---------gagaaagagccgttgggaattttgcaattt 42282306  T
Q  235 tctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||| |||| |||||||||||||||||||||||||||    
T  42282307 tcttaaaaacaatcaatttggtccttggcaattttc 42282342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 46113810 - 46113936
Alignment:
Q  140 aaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctga 239  Q
    ||||||| ||||||   |||||||||||||||||  ||||||||| || |||| |||||||||||||||||||| ||||| |||||||  ||||||||||    
T  46113810 aaattataacattaaggttccaaatttatatatttggggaagaaaaaggcgttaatgagaaagaggagaaagagtcgttgagaattttacaattttctga 46113909  T
Q  240 aaatcaatcaatttggtccttggcaat 266  Q
    |||||||||||||||||||||||||||    
T  46113910 aaatcaatcaatttggtccttggcaat 46113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27897987 - 27897858
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||| |||| |||||||||     
T  27897987 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttacacaaaccattcgcacatcacataaccattgctaaacaaacc 27897888  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||| ||||||||| ||||    
T  27897887 tttggcagagggcaggcatagaaaggcctt 27897858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 17516686 - 17516772
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||    
T  17516686 taggttacaaattataacattagagttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagccgtt 17516772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21349966 - 21350056
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||||| ||||||    
T  21349966 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatctgtactatttaaacaaatcattcacacatcacataaccattgtt 21350056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 43766763 - 43766847
Alignment:
Q  134 ggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||| |||||||  |||||||||||||||||  ||||||||| ||||||| ||||| |||||||||||||||||||    
T  43766763 ggtgacaaattatcacattagggttccaaatttatatatttggggaagaaaaagtcgttaatgaggaagaggagaaagagccgtt 43766847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44275090 - 44275000
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||  ||||||||| ||||||  |||||||||||||||||||||||||    
T  44275090 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatatgtactatttaaacaaattattcacacatcacataactattgtt 44275000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46198991 - 46199081
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||| | ||||||    
T  46198991 aaatttacaattttcaccatcatcctatacaattaaaagacaaaatcagtactatttaaacaaatcattcacacatcacatagccattgtt 46199081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 48829672 - 48829610
Alignment:
Q  208 aaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  48829672 aaagagccgttgggaattttgcaattttctgaaaatcaatcaatttgttccttgacaattttc 48829610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 21350335 - 21350416
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagag 213  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||||||| || || ||||||||||||||    
T  21350335 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagtcgttaataaggaagaggagaaagag 21350416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 610930 - 611057
Alignment:
Q  134 ggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaatt 233  Q
    ||||||||||||| ||||||   ||||||| |||||||||  |||||||||||| |||| ||||||||||           ||||| |||||||| ||||    
T  610930 ggtgacaaattataacattaaggttccaaaattatatatttggggaagaaagagccgttaatgagaaagaat---------cgttgagaattttgcaatt 611020  T
Q  234 ttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||| ||||||||    
T  611021 ttctgaaaatcaatcaatttggtccttgacaattttc 611057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 24845922 - 24845992
Alignment:
Q  54 attttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaag 125  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||||||||||    
T  24845922 atttaaacaaaccattcacacatcacataaccattgttaaacaaacatttggcaga-gacagacatagaaag 24845992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 2378654 - 2378740
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| | |||||  |||||||||||||||||  ||||||||||||||||| ||| | |||||||||||||||||||    
T  2378654 taggtaacaaattataatattagggttccaaatttatatatttggggaagaaagagtcgttaatgtggaagaggagaaagagccgtt 2378740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43766393 - 43766483
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||||||| ||||||| ||||  |||||| || |||||| ||||||||||||||||||||||||||    
T  43766393 aaatttacaattttcaccatcatcctatacaataaaaagacaaaatttgtactacttaaacaaatcattcacacatcacataactattgtt 43766483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53188572 - 53188474
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| |||||||| | | || |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||||    
T  53188572 aaatttacaattttcacaatcatcctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaac 53188474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35904621 - 35904492
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| | | || |||||||||| ||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||||     
T  35904621 aaatttacaattttcacaatcatcctatacaataaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaacc 35904522  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||  ||| ||||||  ||||||||| ||||    
T  35904521 ttatgcagagggcaagcatagaaaggcctt 35904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 27897568 - 27897488
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaaga 212  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||    
T  27897568 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaaga 27897488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 30598713 - 30598633
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaaga 212  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||| ||||||||| ||| ||||| |||||||||||||    
T  30598713 taggtgacaaattataacattagggttccaaatttatatatttggggtagaaagagtagttaatgaggaagaggagaaaga 30598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30599080 - 30598991
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || | |||||||||||||||| |||| |||||||||| |||||| ||||||||||| ||||||| ||||||    
T  30599080 aaatttacaattttcaccatcatcttatacaatcaaaagacaaaataagtactatttaaacaaatcattcacacat-acataaccattgtt 30598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 44268355 - 44268277
Alignment:
Q  134 ggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaaga 212  Q
    ||||||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| | ||| |||||||||||||    
T  44268355 ggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaacgaggaagaggagaaaga 44268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 54412259 - 54412320
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  |||||||||| |||||| ||||| |||||||||||||||||||    
T  54412259 ttccaaatttatatatttggggaagaaagggtcgttaatgaggaagaggagaaagagccgtt 54412320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 13466499 - 13466565
Alignment:
Q  43 aaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaa 109  Q
    |||||||||  | ||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||    
T  13466499 aaatcagtaaaagtttaacaaaccattcccacatcacataaccattgttaaataaacctttggcaaa 13466565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2378268 - 2378325
Alignment:
Q  8 caattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaac 65  Q
    |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||||    
T  2378268 caattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaac 2378325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 32843132 - 32843075
Alignment:
Q  73 acatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||||||||| |||||||||||||| ||| |||||||||| |||||||||| ||||    
T  32843132 acatcacataaccattgttaaacaaacctttagcaaagggcaaacatagaaaggcctt 32843075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48829887 - 48829831
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattt 57  Q
    |||||| |||||||| ||| || |||||||||||||||||| |||||||||||||||    
T  48829887 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactattt 48829831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 51686223 - 51686263
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  51686223 aattttctgaaaatcgatcaatttggtccttggcaattttc 51686263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 41979074 - 41979148
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagcc 215  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||||||||||||||||    
T  41979074 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagcc 41979148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 17516760 - 17516842
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| |||||| ||||||||||||||| |||| ||||        ||||||||||| |||||||||||||||| ||||||||    
T  17516760 agaaagagccgttaatgagacagaggagaaagagccattggcaatt--------ttctgaaaatccatcaatttggtccttgacaattttc 17516842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 46310124 - 46310201
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||||||| |||||||||| ||||    
T  46310124 aattataacattagggttccaaatttatatatttggggaagaaatagcctttaatgagaaagtggagaaagagtcgtt 46310201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 46610991 - 46611068
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  46610991 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 46611068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 54412334 - 54412416
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||  |||| ||||||||||||||||||||||||||  |||||| |        ||||||| |||||||||||||||||||||||||    
T  54412334 agaaagaaccgttaatgagaaagaggagaaagagccgttgacaattttat--------gaaaatccatcaatttggtccttggcaattttc 54412416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 611051 - 611091
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  611051 aattttctgaaaatccatcaatttagtccttggcaattttc 611091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 2378812 - 2378852
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  2378812 aattttctgaaaatccatcaatttggtcattggcaattttc 2378852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 7884068 - 7883992
Alignment:
Q  54 attttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  ||||||||||||||    
T  7884068 atttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaagacctt 7883992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 27897461 - 27897425
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaat 266  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27897461 aattttctgaaaatccatcaatttggtccttggcaat 27897425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 2661703 - 2661742
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  2661703 aattttctgaaaatccatcaatttggtccttggaaatttt 2661742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 3150546 - 3150507
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  3150546 aattttctgaaaatccatcaatttggtccttggaaatttt 3150507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 28626705 - 28626666
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  28626705 aattttctgaaaatccatcaatttggtccttggaaatttt 28626666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 35904085 - 35904046
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  35904085 aattttctgaaaatccatcaatttggtccttggaaatttt 35904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 38192177 - 38192138
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  38192177 aattttctgaaaatccatcaatttggtccttggaaatttt 38192138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 38193305 - 38193344
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  38193305 aattttctgaaaatccatcaatttggtccttggaaatttt 38193344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 41978678 - 41978769
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaag 125  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||||    
T  41978678 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaaag 41978769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 43766835 - 43766882
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaatttt 227  Q
    |||||||| |||| |||||||||||||||||||||| |||| ||||||    
T  43766835 agaaagagccgttaatgagaaagaggagaaagagccattggcaatttt 43766882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 44795685 - 44795724
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  44795685 aattttctgaaaatccatcaatttggtccttggaaatttt 44795724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 46310231 - 46310270
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  46310231 aattttctgaaaatccatcaatttggtccttggaaatttt 46310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 46609443 - 46609404
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  46609443 aattttctgaaaatccatcaatttggtccttggaaatttt 46609404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 48829828 - 48829777
Alignment:
Q  79 cataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    |||||| |||||||||||||| ||||||| |||||||| |||||||| ||||    
T  48829828 cataaccattgttaaacaaacctttggcagagggcagatatagaaaggcctt 48829777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 53092917 - 53092878
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  53092917 aattttctgaaaatccatcaatttggtccttggaaatttt 53092878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 53094068 - 53094107
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  53094068 aattttctgaaaatccatcaatttggtccttggaaatttt 53094107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 53188036 - 53187997
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  53188036 aattttctgaaaatccatcaatttggtccttggaaatttt 53187997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 23291941 - 23291867
Alignment:
Q  136 tgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaa 210  Q
    |||| |||||| |||||||  ||||||||||||||||| |  |||||||||| |||| | ||| |||||||||||    
T  23291941 tgacgaattataacattagggttccaaatttatatatttatagaagaaagagccgttaacgaggaagaggagaaa 23291867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 46309201 - 46309131
Alignment:
Q  148 acattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||||||||    
T  46309201 acattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagccgtt 46309131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 7883695 - 7883618
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||  |||||||||||||| ||||    
T  7883695 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaagaagaggagaaagagtcgtt 7883618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 24846349 - 24846414
Alignment:
Q  204 ggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||||||  | |||||||||||| |||||| || ||||| || |||||||||||||| ||||||    
T  24846349 ggagaaagatacattgggaattttgcaattttttgtaaatctatgaatttggtccttggtaatttt 24846414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 30598639 - 30598557
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||| ||||| |||| |||||||||||| ||||||||| ||||||        ||||||||| |||||||||||| ||| ||||||||    
T  30598639 agaaagaatcgttaatgaaaaagaggagaaaaagccgttggcaatttt--------ctgaaaatccatcaatttggtcattgacaattttc 30598557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 35904191 - 35904118
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagc 214  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||  |||||||||||||||    
T  35904191 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaagaagaggagaaagagc 35904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 38193198 - 38193275
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||| ||||    
T  38193198 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagtggagaaagagtcgtt 38193275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 44795578 - 44795651
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagc 214  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||||| |||||||||    
T  44795578 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagagaagaaagagc 44795651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 46609550 - 46609473
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| ||| |||||||||| ||||    
T  46609550 aattataacattagggttccaaatttatatatttggggaagaaatagcctttaatgaggaagtggagaaagagtcgtt 46609473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 54899796 - 54899873
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||  || || || |||||||||||||| ||||    
T  54899796 aattataacattagggttccaaatttatatatttggggaagaaatagtgcttaataaggaagaggagaaagagtcgtt 54899873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 21350434 - 21350474
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  21350434 aattttctgaaaattcatcaatttggttcttggcaattttc 21350474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 23291829 - 23291789
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||| | ||||||||    
T  23291829 aattttctgaaaatccatcaatttggtcctcgacaattttc 23291789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 44268241 - 44268201
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| ||| || |||||||||||||||||||||||||    
T  44268241 aattttctaaaagtccatcaatttggtccttggcaattttc 44268201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 48829616 - 48829576
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| ||||||| ||||||||||||||| ||||||||    
T  48829616 aattttctaaaaatcattcaatttggtccttgacaattttc 48829576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 39663937 - 39663808
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| | | || |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||     
T  39663937 aaatttacaattttcactatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaaccattcgcacatcacataaccattgttaaacaaact 39663838  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||||||||||||| ||||    
T  39663837 tttggcagagggcagacatagaaaggcctt 39663808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 19581954 - 19581838
Alignment:
Q  9 aattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaa 108  Q
    ||||||| ||| || |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||     
T  19581954 aattttcaccatcatcctacacaattaaaagacaaaatcagtactattttaacaaaccattcacacatcgcataaccattgttaaacaaacctttggcag 19581855  T
Q  109 agggcagacatagaaag 125  Q
    |||| ||||||||||||    
T  19581854 agggaagacatagaaag 19581838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 44708694 - 44708571
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || | |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||     
T  44708694 aaatttacaattttcaccatcatcatatacaatcaaaagacaaaataagtactatttaaacaaaccattcacacatcacataaccattgttaaacaaacc 44708595  T
Q  101 tttggcaaagggcagacatagaaa 124  Q
    |||| || |||| |||||||||||    
T  44708594 tttgacagagggtagacatagaaa 44708571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 19581738 - 19581668
Alignment:
Q  200 aagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  19581738 aagaggagaaagagccgttgtgaattttgcaattttctgaaaatcaataaatttggtccttggcaattttc 19581668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 6799146 - 6799276
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||| |||||| |||| ||||| ||||||||||||||||||||          ||    
T  6799146 taggtgacaaattataacattagggttccaaatttatatatttggggaataaagagccgttaatgaggaagaggagaaagagccgttg--------acaa 6799237  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  6799238 ttttttgaaaatccatcaatttggtccttggcaattttc 6799276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 17697848 - 17697979
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||| ||| ||||| || ||||||||||| |||||          ||    
T  17697848 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagttgttaatgaggaataggagaaagaggcgttg--------acaa 17697939  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttca 271  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  17697940 ttttctgaaaatccatcaatttggtccttgacaattttca 17697979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 6798779 - 6798860
Alignment:
Q  3 atttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataac 84  Q
    |||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  6798779 atttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacacatcacataac 6798860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2768185 - 2768275
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || |||||| ||||||||||| ||| ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  2768185 aaatttacaattttcaccatcatcctatataatcaaaagacaaaaccagtactatttaaacaaatcattcacacatcacataaccattgtt 2768275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 16377138 - 16377052
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  16377138 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 16377052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 42517933 - 42517847
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||  ||| ||||| |||||||||||||||||||    
T  42517933 taggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagctgttaatgaggaagaggagaaagagccgtt 42517847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 17697503 - 17697568
Alignment:
Q  26 tatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  17697503 tatacaatcaaaagacaaaatcagtactatttaaacaaatcattcacacatcacataaccattgtt 17697568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 39456519 - 39456649
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  || ||||||||||||||  || ||||||||| |||| |||||||||| || ||||||||||||        | ||    
T  39456519 taggtgacaaattataacattagagtttcaaatttatatatttgggaaagaaagagccgttaatgagaaagatgacaaagagccgttg--------gcaa 39456610  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||| |||||||| ||||||| ||||||||    
T  39456611 ttttctgaaaatccatcaatttagtccttgacaattttc 39456649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 6784137 - 6784037
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| |||||| ||||||||    
T  6784137 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaaacatagaa 6784038  T
Q  124 a 124  Q
    |    
T  6784037 a 6784037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42518300 - 42518212
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || ||||||||||||||||||  |||||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  42518300 aaatttacaattttcaccatcatcctatacaatcaaaagac--aatcagtactatttaaacaaatcattcacgcatcacataaccattgtt 42518212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 19907092 - 19907006
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||| ||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  19907092 taggtaacaaattataacattagggttccgaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 19907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34401055 - 34400965
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| ||| |||| ||| || |||||||||||||||||| ||||  ||||||||| ||||||  |||||||||||||||||||||||||    
T  34401055 aaatttacaactttcaccatcatcctatacaatcaaaagacaaaatatgtactatttaaacaaattattcacacatcacataactattgtt 34400965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 34400682 - 34400601
Alignment:
Q  134 ggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagcc 215  Q
    ||||||||||||| |||||||  |||||||||||||||||  |||||||||||| |||  ||||| ||||||||||||||||    
T  34400682 ggtgacaaattataacattagggttccaaatttatatatttggggaagaaagagccgtaaatgaggaagaggagaaagagcc 34400601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 31474880 - 31474947
Alignment:
Q  202 gaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||| |||||  |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  31474880 gaggaaaaagatacgttgggaattttgcaattttctgtaaatcaatcaatttggtccttggtaatttt 31474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 31471007 - 31471065
Alignment:
Q  67 attcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaag 125  Q
    ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  31471007 attcaaacatcacataaccattgttaaacaaacctttggcagagggcagacatagaaag 31471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 19581674 - 19581634
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19581674 aattttctgaaaatcaatcaatttggtccttggcaattttc 19581634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 24206380 - 24206305
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||||||||||||||| |||||||||  |||| || ||| |||||| |||||| ||||| ||||||||||||||    
T  24206380 cctatacaatcaaaagacaaaatcagtataatttaaataaaacattcatacatcaaataaccattgttaaacaaac 24206305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 2577169 - 2577246
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  2577169 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 2577246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 16377038 - 16376956
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||  ||||||        ||||||||| |||||||||||||||| ||||||||    
T  16377038 agaaagagccgttaatgagaaagaggagaaagagccgttgacaatttt--------ctgaaaatccatcaatttggtccttgacaattttc 16376956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 37021875 - 37021952
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  37021875 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 37021952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 42517859 - 42517777
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||        | ||||||||||||||| ||||||||| |||||| ||||||||    
T  42517859 agaaagagccgttaatgagaaagaggagaaagagccgttg--------gcaattttctgaaaatccatcaatttgctccttgacaattttc 42517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 39663513 - 39663437
Alignment:
Q  138 acaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagc 214  Q
    ||||||||| |||||||  || ||||||| ||||||  |||||||||||| |||| ||||| |||||||||||||||    
T  39663513 acaaattataacattagggtttcaaatttttatatttggggaagaaagagccgttaatgaggaagaggagaaagagc 39663437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 19906942 - 19906903
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19906942 aattttctgaaaatccatcaatttggtccttggcaatttt 19906903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 16764300 - 16764377
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||| ||||    
T  16764300 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagtcgtt 16764377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 37646293 - 37646338
Alignment:
Q  216 gttgggaattttgtaattttctgaaaatcaatcaatttggtccttg 261  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||    
T  37646293 gttgggaattttgcaattttctgtaaatcaatcaattttgtccttg 37646338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 6783649 - 6783610
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  6783649 aattttctgaaaatccatcaatttggtccttggaaatttt 6783610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 14387643 - 14387604
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  14387643 aattttctgaaaatccatcaatttggtccttggaaatttt 14387604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 24205891 - 24205853
Alignment:
Q  231 attttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  24205891 attttctgaaaatccatcaatttggtccttggaaatttt 24205853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 24205999 - 24205922
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | |  ||||| ||| |||||||||||||||    
T  24205999 aattataacattagggttccaaatttatatatttggggaagaaatagccctaaatgaggaagtggagaaagagccgtt 24205922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 39663412 - 39663375
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatt 267  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  39663412 aattttatgaaaatccatcaatttggtccttggcaatt 39663375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 40561600 - 40561677
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||   |||| ||| || | || ||||| |||||||||||||||||||    
T  40561600 aattataacattagggttccaaatttatatatttgaggaataaatagcccttaatgaggaagaggagaaagagccgtt 40561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 161890 - 161942
Alignment:
Q  216 gttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattt 268  Q
    |||||| | |||| ||||||||| ||||||||||||||||||| ||| |||||    
T  161890 gttggggaatttgcaattttctgtaaatcaatcaatttggtccgtggtaattt 161942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 2577276 - 2577308
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  2577276 aattttctgaaaatccatcaatttggtccttgg 2577308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 40561707 - 40561739
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  40561707 aattttctgaaaatccatcaatttggtccttgg 40561739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 107459 - 107330
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||     
T  107459 aaatttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaaccattcacacatcacataaccactgttaaacaaacc 107360  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||  ||||||||| ||||    
T  107359 tttggcagagggcatgcatagaaaggcctt 107330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 269
Target Start/End: Complemental strand, 107041 - 106914
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    ||||||||||||||| |||||||  ||| ||||| ||||| |  ||||||||||||||||| |||||||||||         ||| |||||||||   ||    
T  107041 taggtgacaaattataacattagggttcgaaatt-atataatttgggaagaaagagtcgttaatgagaaagag---------ccgctgggaatttcacaa 106952  T
Q  232 ttttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||| |||||||||||||||||||||||||||||||||    
T  106951 ttttttgaaaatcaatcaatttggtccttggcaatttt 106914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 106919 - 106880
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  106919 aattttatgaaaatcaatcaatttggtccttgacaatttt 106880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 77; Significance: 9e-36; HSPs: 4)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 808 - 932
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || | |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||  |||||||||||||     
T  808 aaatttacaattttcaccatcatcatatacaatcaaaagacaaaataagtactatttaaacaaaccattcacacatcacataacctttgttaaacaaacc 907  T
Q  101 tttggcaaagggcagacatagaaag 125  Q
    ||||||| |||||||||||||||||    
T  908 tttggcagagggcagacatagaaag 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 1227 - 1313
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||    
T  1227 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaagagccgtt 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 1301 - 1378
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaa 265  Q
    |||||||| |||| |||| ||||||||||||||| |||||| ||||        ||||||||||| ||||||||||||||||||||    
T  1301 agaaagagccgttaatgataaagaggagaaagagtcgttggcaatt--------ttctgaaaatccatcaatttggtccttggcaa 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 1386 - 1426
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  1386 aattttctgaaattccatcaatttggtccttggcaattttc 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2181023 - 2181152
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaaca 100  Q
    |||||| |||||||| ||| || | ||| |||||||||||| ||||||||||||||| || |||||||||  |||||||||||| ||||||||||||||     
T  2181023 aaatttacaattttcaccatcatcttatgcaatcaaaagacaaaatcagtactatttaaataaaccattcggacatcacataaccattgttaaacaaacc 2181122  T
Q  101 tttggcaaagggcagacatagaaagacctt 130  Q
    ||||||| ||||||| ||||||||| ||||    
T  2181123 tttggcagagggcaggcatagaaaggcctt 2181152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18624187 - 18624089
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| |||||||| | | || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  18624187 aaatttacaattttcactatcatcctatacaatcaaaagacaaaatcagtactatttaaacaaaccattcacacatcacataaccattgttaaataaac 18624089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 12738415 - 12738501
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||    
T  12738415 taggtaacaaattataacattagggttccaaatttatatgtttagggaagaaagagtcgttaatgaggaagaggagaaagagccgtt 12738501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 12801238 - 12801324
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||| ||||||||| |||||||  |||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||    
T  12801238 taggtaacaaattataacattagggttccaaatttatatgtttagggaagaaagagtcgttaatgaggaagaggagaaagagccgtt 12801324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 34328177 - 34328265
Alignment:
Q  3 atttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||| |||||||| ||| || |||||||||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||| ||||||    
T  34328177 atttacaattttcaccatcatcctatacaatcaaaagacaaaatcagtattatttaaacaaatcattcacacatcacataaccattgtt 34328265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28821646 - 28821736
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgtt 91  Q
    |||||| |||||||| ||| || ||||| ||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  28821646 aaatttacaattttcaccatcatcctatgcaatcaatagacaaaatcagtactatttaaacaaatcattcacacatcacataaccattgtt 28821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 32134614 - 32134526
Alignment:
Q  130 tataggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    |||||||||| |||| ||||| |||||||||||||||||||    
T  32134614 tataggtgacaaattataacattagggttccaaatttatatatttgtagaagaaagagccgttaatgaggaagaggagaaagagccgtt 32134526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 34328545 - 34328628
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagcc 215  Q
    |||| |||||||||| | |||||  |||||||||||||||||  ||||||||||||||||| ||||| ||||||||||||||||    
T  34328545 taggcgacaaattataatattagggttccaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagcc 34328628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 30464319 - 30464239
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaaga 212  Q
    ||||| ||||||||| |||||||  |||||||||||||||||  |||||||||||| |||| ||||| |||||||||||||    
T  30464319 taggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgaggaagaggagaaaga 30464239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 42472332 - 42472232
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||| ||  ||| ||||||  |||||||    
T  42472332 cctatacaatcaaaagacaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaaccttatgcagagggcaagcatagaa 42472233  T
Q  124 a 124  Q
    |    
T  42472232 a 42472232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 30464679 - 30464608
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaaagacctt 130  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||||| |||| ||| |||||||| ||||    
T  30464679 aacaaaccatttacacatcacataaccattgttaaacaaacctttggcagagggaagatatagaaaggcctt 30464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 8541018 - 8541104
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||| |||||| | |||||  |||||||||||||||||  |||||||||||  |||| ||||| |||||||||||||||||||    
T  8541018 taggtgacgaattataatattagggttccaaatttatatatttggggaagaaagaaccgttaatgaggaagaggagaaagagccgtt 8541104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 21842277 - 21842383
Alignment:
Q  24 cctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaacatttggcaaagggcagacatagaa 123  Q
    |||||||||||||||||  |||||||||  |||| |||||| |||||| |||||| ||||| |||||||||||||  ||  ||| ||||||  |||||||    
T  21842277 cctatacaatcaaaagataaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaatcttatgcagagggcaagcatagaa 21842376  T
Q  124 agacctt 130  Q
    |||||||    
T  21842377 agacctt 21842383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 2181438 - 2181495
Alignment:
Q  161 aaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||    
T  2181438 aaatttatatatttggggtagaaagagtcgttaatgagaaagaggagaaagagccgtt 2181495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 2181483 - 2181565
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| |||||||||||||||||||| |||||| ||||        ||||||||||| |||||||||||||||||||||||||    
T  2181483 agaaagagccgttaatgagaaagaggagaaagagtcgttggcaatt--------ttctgaaaatccatcaatttggtccttggcaattttc 2181565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 28813528 - 28813634
Alignment:
Q  157 ttccaaatttatatattcaggg-aagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttgg 255  Q
    |||||||||||||||||  ||| ||||||||| |||| |||||||||| |||||||||||||||          ||||||||||||||  ||||||||||    
T  28813528 ttccaaatttatatatttgggggaagaaagagccgttaatgagaaagatgagaaagagccgttg--------acaattttctgaaaattcatcaatttgg 28813619  T
Q  256 tccttggcaattttc 270  Q
    |||||||||||||||    
T  28813620 tccttggcaattttc 28813634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17575188 - 17575284
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaa 97  Q
    |||||| |||||||| | | || | |||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||    
T  17575188 aaatttacaattttcacaatcatcatatacaatcaaaagacaaaatcagtataatttaaacaaatcattcatacatcaaataaccattgttaaacaa 17575284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17575908 - 17576004
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaa 97  Q
    |||||| |||||||| | | || | |||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||    
T  17575908 aaatttacaattttcacaatcatcatatacaatcaaaagacaaaatcagtataatttaaacaaatcattcatacatcaaataaccattgttaaacaa 17576004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17577219 - 17577315
Alignment:
Q  1 aaatttgcaattttccccagcaacctatacaatcaaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaa 97  Q
    |||||| |||||||| | | || | |||||||||||||||| |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||    
T  17577219 aaatttacaattttcacaatcatcatatacaatcaaaagacaaaatcagtataatttaaacaaatcattcatacatcaaataaccattgttaaacaa 17577315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 18623821 - 18623720
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaa 231  Q
    |||||||| |||||| |||||||  |||||||||||||||||  |||||||||||| |||| |||||   |||||||||||||| || | ||||||| ||    
T  18623821 taggtgacgaattataacattagggttccaaatttatatatttggggaagaaagagccgttaatgag--cgaggagaaagagcctttagaaattttgcaa 18623724  T
Q  232 tttt 235  Q
    ||||    
T  18623723 tttt 18623720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 7269168 - 7269245
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||||||||    
T  7269168 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagccgtt 7269245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 32134538 - 32134456
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaattttgtaattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    |||||||| |||| ||||||||||||||||||||||||||        | |||||| |||||||  |||||||||||||||||||||||||    
T  32134538 agaaagagccgttaatgagaaagaggagaaagagccgttg--------gcaattttatgaaaattcatcaatttggtccttggcaattttc 32134456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 40781900 - 40781977
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  40781900 aattataacattagggttccaaatttatatatttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 40781977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 12738565 - 12738604
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12738565 aattttctgaaaatccatcaatttggtccttggcaatttt 12738604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 12801388 - 12801427
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12801388 aattttctgaaaatccatcaatttggtccttggcaatttt 12801427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 28821804 - 28821870
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgag 198  Q
    ||||||||||||||| |||||||  || ||||||||||||||  |||||||||||| |||| |||||    
T  28821804 taggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagccgttaatgag 28821870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 17576311 - 17576388
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||| ||||    
T  17576311 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagtcgtt 17576388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 17577623 - 17577700
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  ||||||||| || | || ||||| |||||||||||||| ||||    
T  17577623 aattataacattagggttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggagaaagagtcgtt 17577700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 41494210 - 41494074
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagag---------gagaaagagccgttggga 222  Q
    ||||||||||||||| ||||| |  |||||||||||||||||  ||| ||||| || ||||||||||||| ||         || |||||  | ||||||    
T  41494210 taggtgacaaattataacattcgggttccaaatttatatattt-gggtagaaaaagccgttcatgagaaaaagttgttgggggaaaaagatacattggga 41494112  T
Q  223 attttgtaattttctgaaaatcaatcaatttggtcctt 260  Q
    |||||| || |||||| |||||||||||||||||||||    
T  41494111 attttgcaaatttctgtaaatcaatcaatttggtcctt 41494074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 30464160 - 30464120
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaattttc 270  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  30464160 aattttctgaaaatccatcaatttggtccttgacaattttc 30464120  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 7269275 - 7269314
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  7269275 aattttctgaaaatccatcaatttggtccttggaaatttt 7269314  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 24540056 - 24540017
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  24540056 aattttctgaaaatccatcaatttggtccttggaaatttt 24540017  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 42471808 - 42471769
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  42471808 aattttctgaaaatccatcaatttggtccttggaaatttt 42471769  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 7268782 - 7268847
Alignment:
Q  34 caaaagacgaaatcagtactattttaacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    |||||| | |||||||||  |||| |||||| |||||| |||||| ||||| ||||||||||||||    
T  7268782 caaaaggcaaaatcagtataatttaaacaaaacattcatacatcaaataaccattgttaaacaaac 7268847  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 24540147 - 24540086
Alignment:
Q  157 ttccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||||||||||||||  ||||||||| || | || ||||| ||||||| |||||||||||    
T  24540147 ttccaaatttatatatttggggaagaaatagcccttaatgaggaagaggaaaaagagccgtt 24540086  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 29620538 - 29620465
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagc 214  Q
    |||||| |||||||  |||||||||||||||||   |||||||| |||| || ||||| ||| |||||||||||    
T  29620538 aattataacattagggttccaaatttatatatttgaggaagaaatagtccttaatgaggaagtggagaaagagc 29620465  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 28036188 - 28036148
Alignment:
Q  59 aacaaaccattcacacatcacataactattgttaaacaaac 99  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  28036188 aacaaaccattccgacatcacataaccattgttaaacaaac 28036148  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 29620431 - 29620399
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  29620431 aattttctgaaaatccatcaatttggtccttgg 29620399  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 30464203 - 30464171
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttgg 262  Q
    ||||||||||||||| |||||||||||||||||    
T  30464203 aattttctgaaaatccatcaatttggtccttgg 30464171  T

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Target: scaffold0564 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 9611 - 9697
Alignment:
Q  132 taggtgacaaattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    ||||||||||||||| |||||||  || ||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||    
T  9611 taggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagtcgttaatgaggaagaggagaaagagccgtt 9697  T

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Target: scaffold0564; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 9711 - 9758
Alignment:
Q  180 agaaagagtcgttcatgagaaagaggagaaagagccgttgggaatttt 227  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  9711 agaaagagccgttaatgagaaagaggagaaagagccgttggtaatttt 9758  T

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Target: scaffold0081 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 53947 - 54024
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||| ||  ||||||||| |||| || ||||| ||| |||||||||||||||    
T  53947 aattataacattagggttccaaatttatatctttggggaagaaatagtccttaatgaggaagtggagaaagagccgtt 54024  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 6925 - 7002
Alignment:
Q  141 aattattacattagcattccaaatttatatattcagggaagaaagagtcgttcatgagaaagaggagaaagagccgtt 218  Q
    |||||| |||||||  |||||||||||||||||  || |||||| || | || ||||| |||||||||||||||||||    
T  6925 aattataacattagggttccaaatttatatatttgggtaagaaatagaccttaatgaggaagaggagaaagagccgtt 7002  T

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Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 7032 - 7071
Alignment:
Q  230 aattttctgaaaatcaatcaatttggtccttggcaatttt 269  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  7032 aattttctgaaaatccatcaatttggtccttggaaatttt 7071  T

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