View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_243 (Length: 271)
Name: NF9288A_low_243
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_243 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 41963182 - 41963442
Alignment:
| Q |
14 |
agatggggggaggacctaaactaagctaaattgagcaacttacttcaaataaactcaaagtctccgaataacttttttattattgctattttgacccgta |
113 |
Q |
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| T |
41963182 |
agatggggggaggacctaaactaagctaaattgagtaacttacttcaaataaactcaaagtctccgaataacttttttattattgctattttgacccgta |
41963281 |
T |
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| Q |
114 |
aacaataccttaaagattgatcaattccaggttcttcagaagtagataattgtctgctctgaga---------agattctatacttgaagttggaatttg |
204 |
Q |
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| T |
41963282 |
aacaataccttaaagattgatcaattccaggttcttcggaagtagataattgtctgctctgagaagattctatagattctatacttgaagttggaatttg |
41963381 |
T |
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| Q |
205 |
aaagtgatcagggatgatttttaatttttgaggacaatcatccatgaaattaaacttcttt |
265 |
Q |
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| T |
41963382 |
aaagtgatcagggatgatttttaatttttgaggacaatcatccatgaaattaaacttcttt |
41963442 |
T |
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