View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_304 (Length: 253)
Name: NF9288A_low_304
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_304 |
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Alignment Details
Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35037035 - 35036911
Alignment:
| Q |
1 |
gagtgcacaatcttgcgattcattggaattccttgttaagtgggataagtgcatgtaccttgcgcttgcaggcatttctgcatcgactatagctgtgcat |
100 |
Q |
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| T |
35037035 |
gagtgcacaattttgcgattcattggaattcctagttaagtgggataagtgcatgtaccttgcgcttgcaggcatttctgcatcgactatagctgtgcat |
35036936 |
T |
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| Q |
101 |
atttgggcaatgttcactatgaatc |
125 |
Q |
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||||||||||||||||||||||||| |
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| T |
35036935 |
atttgggcaatgttcactatgaatc |
35036911 |
T |
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