View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_329 (Length: 250)
Name: NF9288A_low_329
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_329 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 7322352 - 7322118
Alignment:
| Q |
1 |
aggagcgcttttacttgagagctaaagtggttattggttcctatataagtggcctctacatcaaacatacatccaatatgacagtattttaatacaatga |
100 |
Q |
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|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7322352 |
aggagcgcttttacttgagagctaaagtggttttgggttcctatataagtggcctctacatcaaacatacatccaatatgacagtattttaatacaatga |
7322253 |
T |
|
| Q |
101 |
agctcagttagttggctaaaggatgttgaaagagttataacaaggaggtccaagattcaaacttagaaattattgttattaatatctaacattttcctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7322252 |
agctcagttagttggctaaaggatgttgaaagagttataacaaggaggtccaagattcaaacttagaaattattgttattaatatctaacattttcctat |
7322153 |
T |
|
| Q |
201 |
tcctagaaagaaacaagggttaatagtgttttaac |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
7322152 |
tcctagaaagaaacaagggttaatagtgttttaac |
7322118 |
T |
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