View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9288A_low_331 (Length: 250)

Name: NF9288A_low_331
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9288A_low_331
NF9288A_low_331
[»] chr2 (16 HSPs)
chr2 (10-225)||(8579550-8579765)
chr2 (15-225)||(9061209-9061419)
chr2 (155-224)||(9364511-9364580)
chr2 (13-105)||(17566149-17566241)
chr2 (13-134)||(10347740-10347861)
chr2 (155-225)||(7115835-7115905)
chr2 (13-135)||(8573571-8573693)
chr2 (155-225)||(9284380-9284450)
chr2 (76-133)||(9291899-9291956)
chr2 (156-225)||(10335738-10335807)
chr2 (13-52)||(7611976-7612015)
chr2 (92-135)||(9274475-9274518)
chr2 (13-52)||(9364665-9364704)
chr2 (164-226)||(8573725-8573787)
chr2 (164-225)||(9291804-9291865)
chr2 (13-113)||(12018954-12019054)
[»] chr3 (2 HSPs)
chr3 (13-225)||(39427495-39427719)
chr3 (13-135)||(37462443-37462565)
[»] chr4 (2 HSPs)
chr4 (13-137)||(561174-561298)
chr4 (159-224)||(561066-561131)
[»] chr5 (2 HSPs)
chr5 (13-137)||(36224364-36224494)
chr5 (156-212)||(36224295-36224351)
[»] chr1 (4 HSPs)
chr1 (163-225)||(29423147-29423209)
chr1 (155-225)||(29453494-29453564)
chr1 (163-225)||(29467978-29468040)
chr1 (163-222)||(29443519-29443578)
[»] chr7 (3 HSPs)
chr7 (164-222)||(45243555-45243613)
chr7 (164-222)||(45230293-45230351)
chr7 (13-132)||(45243656-45243775)
[»] chr8 (1 HSPs)
chr8 (168-225)||(41966911-41966968)


Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 225
Target Start/End: Original strand, 8579550 - 8579765
Alignment:
Q  10 aaaaatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctag 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8579550 aaaaatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttgtgttattctag 8579649  T
Q  110 tgatagaagtaaatttctgttggaagtaaaaggtgatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgtt 209  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8579650 tgatagaagtaaagttctgttggaagtaaaaggtaatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgtt 8579749  T
Q  210 caaggaattcctaatt 225  Q
    ||||||||||||||||    
T  8579750 caaggaattcctaatt 8579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 9061209 - 9061419
Alignment:
Q  15 tatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtgata 114  Q
    ||||||| ||||||||||||||||||| | |||||||| |   | ||||| ||||||  |||||||   | ||||| ||| ||||||||||||||||||     
T  9061209 tatggatctagagatagttggtgtaaactttttactttggttaaatcgtgtttcaattcacctttggactttttgaggccgttatgttattctagtgatg 9061308  T
Q  115 gaagtaaatttctgttggaagtaaaaggtgatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaagg 214  Q
    || ||||  |||||||||||| |||   | |  |  ||| |  |  || |||||||||||||||||||||||| |||||| |||||| || |||| ||||    
T  9061309 gaggtaaggttctgttggaagcaaatcctaacttggataaaactcttaggaagctgttttggtatgatctcaagagtgaacaagttagttatgttgaagg 9061408  T
Q  215 aattcctaatt 225  Q
    |||||||||||    
T  9061409 aattcctaatt 9061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 9364580 - 9364511
Alignment:
Q  155 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaat 224  Q
    |||| ||||||||||||||||||| |||||||| |||||| | |||||| |||||| |||||||||||||    
T  9364580 agatcgtaagaagctgttttggtacgatctcaagagtgaaaacgttactagtgttccaggaattcctaat 9364511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 17566149 - 17566241
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttatt 105  Q
    |||||||||||||||||| |||||||||||||||||| || |  || | | | |||| || |||||||| || ||||||||||||||||||||    
T  17566149 aatatggatttagagataattggtgtaaattgtttaccttgggcgagtggcgtttcagtatacctttgatatatttgaagcctttatgttatt 17566241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 10347861 - 10347740
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||||| ||||||||||||||||||| | |||||| | |  || ||||| ||| ||  |||||||| ||  |||| |||  ||||||||||||||||    
T  10347861 aatatggatgtagagatagttggtgtaaactttttactatggctgagtcgtgtttcgatttacctttgaaattgttgaggcccatatgttattctagtga 10347762  T
Q  113 tagaagtaaatttctgttggaa 134  Q
    | |||||||  |||||||||||    
T  10347761 tggaagtaaggttctgttggaa 10347740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 7115835 - 7115905
Alignment:
Q  155 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    |||||||| ||||||| ||||||||||| | || || ||| |||||| ||||||| |||||||||||||||    
T  7115835 agattgtaggaagctggtttggtatgatttgaagagcgaacaagttagttgtgttgaaggaattcctaatt 7115905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 8573571 - 8573693
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||| | ||||||||||||||||||| | |||||||| |   | ||||| |||| |  || ||| | ||||| || ||||||| |||||||||||||    
T  8573571 aatatggttctagagatagttggtgtaaactttttactttcgttaaatcgtgtttcactccacattttaaatcttcgaggcctttaggttattctagtga 8573670  T
Q  113 tagaagtaaatttctgttggaag 135  Q
    | |||||||  ||||||||||||    
T  8573671 tggaagtaaggttctgttggaag 8573693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 9284380 - 9284450
Alignment:
Q  155 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    |||||||||||||||| ||||||||||| | || |||||  |||||| || |||| |||||||||||||||    
T  9284380 agattgtaagaagctggtttggtatgatttgaagagtgagcaagttatttatgttgaaggaattcctaatt 9284450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 9291956 - 9291899
Alignment:
Q  76 ctttgagatctttgaagcctttatgttattctagtgatagaagtaaatttctgttgga 133  Q
    |||||| |||||||| |||||||||||||||||| ||| |||||||  ||||||||||    
T  9291956 ctttgaaatctttgaggcctttatgttattctagggatggaagtaaggttctgttgga 9291899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 10335807 - 10335738
Alignment:
Q  156 gattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    |||||||||||| |||||||||||||| | || |||||| || ||| || |||| |||||||||||||||    
T  10335807 gattgtaagaagttgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatt 10335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 7612015 - 7611976
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttt 52  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7612015 aatatggattaaaagatagttggtgtaaattgtttacttt 7611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 9274518 - 9274475
Alignment:
Q  92 gcctttatgttattctagtgatagaagtaaatttctgttggaag 135  Q
    |||||||||||||||||||||| |||||||  ||||||||||||    
T  9274518 gcctttatgttattctagtgatggaagtaaggttctgttggaag 9274475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 9364704 - 9364665
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttt 52  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9364704 aatatggattaaaagatagttggtgtaaattgtttacttt 9364665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 8573725 - 8573787
Alignment:
Q  164 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaattg 226  Q
    ||||||||||||||||||| | || |||||| |||| | || |||| ||||||||||||||||    
T  8573725 gaagctgttttggtatgatttgaagagtgaacaagtcagttatgttgaaggaattcctaattg 8573787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 9291865 - 9291804
Alignment:
Q  164 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    ||||||||||||||||||| | || |||||| || ||| || |||| |||||||||||||||    
T  9291865 gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatt 9291804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 12018954 - 12019054
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||||| ||||||||||||||||||| | ||||||||   ||| ||||| |||  |  |||||| |||| |||||  |||||| ||||||| |||||    
T  12018954 aatatggatgtagagatagttggtgtaaactttttactttgatggaatcgtgtttcgttttaccttttagatttttgagccctttaggttattcgagtga 12019053  T
Q  113 t 113  Q
    |    
T  12019054 t 12019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 39427719 - 39427495
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttga---ggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctag 109  Q
    ||||||||| |||| |||||||||||||||||||||||||||    ||| | ||| ||||||  |||||| |  ||||||||||||||||||||||| ||    
T  39427719 aatatggatatagatatagttggtgtaaattgtttacttttgtaggggaatggtgtttcaattcacctttaatgtctttgaagcctttatgttattccag 39427620  T
Q  110 tgatagaagtaaatttctgttggaagtaaaa------ggtgatctctatagagattgt---aagaagctgttttggtatgatctcaaaagtgaagaagtt 200  Q
    ||||||||||||| |||||||||||||||||      |||||| || | || |||  |   |||||||||||||||||| ||||||||||| |  |||||    
T  39427619 tgatagaagtaaagttctgttggaagtaaaatttaggggtgatttcaagagtgatcctaagaagaagctgttttggtattatctcaaaagttataaagtt 39427520  T
Q  201 acttgtgttcaaggaattcctaatt 225  Q
    || | ||||| | ||||||||||||    
T  39427519 acctatgttccaagaattcctaatt 39427495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 37462565 - 37462443
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||||| ||||||||||||||||||| | | |||| | ||  | ||||| |||| |  |||||||| |||||||| |||||||||||||||||||||    
T  37462565 aatatggatctagagatagttggtgtaaactttgtactgtggataaatcgtgtttcacttcacctttgaaatctttgaggcctttatgttattctagtga 37462466  T
Q  113 tagaagtaaatttctgttggaag 135  Q
    | |||||||  || |||||||||    
T  37462465 tggaagtaaggttttgttggaag 37462443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 561298 - 561174
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||   ||  |||| || |||||| | | | | |||||||||| |||||||| ||||    
T  561298 aatatggatttagagatagttggtgtgtattgtttactttggaggaagtgtttttcagtagaccttttacaccatggaagcctttaggttattctggtga 561199  T
Q  113 tagaagtaaatttctgttggaagta 137  Q
    |||||||||| ||||||||||||||    
T  561198 tagaagtaaagttctgttggaagta 561174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 561131 - 561066
Alignment:
Q  159 tgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaat 224  Q
    ||||| ||| ||||||||||||||||||||||| ||  || ||| ||||||| |||||||||||||    
T  561131 tgtaaaaagttgttttggtatgatctcaaaagtaaaagagctacctgtgttccaggaattcctaat 561066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 36224494 - 36224364
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaaccttt------gagatctttgaagcctttatgttattc 106  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | ||  ||| ||  ||||||      || |||||||||||||| |||||||||    
T  36224494 aatatggatttagagatagttggtgtaaattgtttactttgtgggaatggtatttcgattcaccttttaaattgatatctttgaagccttcatgttattc 36224395  T
Q  107 tagtgatagaagtaaatttctgttggaagta 137  Q
     ||||||||||||||| ||||||||||||||    
T  36224394 cagtgatagaagtaaagttctgttggaagta 36224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 36224351 - 36224295
Alignment:
Q  156 gattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaa 212  Q
    |||| |||||||  |||||||||| ||||||||||| | |||||||| |||||||||    
T  36224351 gattctaagaaggagttttggtattatctcaaaagttatgaagttacctgtgttcaa 36224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 29423209 - 29423147
Alignment:
Q  163 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  29423209 agaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatt 29423147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 29453494 - 29453564
Alignment:
Q  155 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||    
T  29453494 agattgtgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttgaaggaattcctaatt 29453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 29467978 - 29468040
Alignment:
Q  163 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    ||||| ||||||||||||||||||| |||||| | |||| || |||| |||||||||||||||    
T  29467978 agaagttgttttggtatgatctcaagagtgaacatgttaattatgttgaaggaattcctaatt 29468040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 29443519 - 29443578
Alignment:
Q  163 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 222  Q
    ||||||||||||||||||||||||| ||||||   |||| || |||| ||||||||||||    
T  29443519 agaagctgttttggtatgatctcaagagtgaatgtgttagttatgttgaaggaattccta 29443578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 45243613 - 45243555
Alignment:
Q  164 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 222  Q
    |||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||    
T  45243613 gaagctgttttggtatgatctcaacagtgaacaacttacttatgttcaaggaattccta 45243555  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 45230351 - 45230293
Alignment:
Q  164 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 222  Q
    ||||||||||||||||||| |||| |||||| ||||||||  |||||||||||||||||    
T  45230351 gaagctgttttggtatgatttcaagagtgaacaagttactcatgttcaaggaattccta 45230293  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 45243775 - 45243656
Alignment:
Q  13 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 112  Q
    ||||||| | |||||||| |||||||||| | |||||||| |   | ||||| ||||||   | ||||  |||||||| ||||||||||||||| |||||    
T  45243775 aatatggttctagagatatttggtgtaaactttttactttggttaaatcgtgtttcaattttcatttggaatctttgaggcctttatgttattcgagtga 45243676  T
Q  113 tagaagtaaatttctgttgg 132  Q
    | |||||||| |||||||||    
T  45243675 tcgaagtaaagttctgttgg 45243656  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 41966911 - 41966968
Alignment:
Q  168 ctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 225  Q
    ||||||||||||||| | || |||||| || |||||| |||| |||||||||||||||    
T  41966911 ctgttttggtatgatttgaagagtgaacaaattacttatgttgaaggaattcctaatt 41966968  T

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