View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_341 (Length: 249)
Name: NF9288A_low_341
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_341 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 21327097 - 21327327
Alignment:
| Q |
14 |
agaatttagtaaaagaacaaggtaaagtacaagaagagtgatgaaatgtgaagaagacatcaaaaatatttttcaaacttgtaattttgtctttgatttt |
113 |
Q |
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| T |
21327097 |
agaatttagtaaaagaacaaggtaaagtacaagaagagtgatgaaatgtgaagaagacatcaaaaatattttttaaacttgtaattttgtctttgatttt |
21327196 |
T |
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| Q |
114 |
gagtttgtatatgtgagactgaaaagagaggttttatggtagattggtgtaaaagggttgaaaataagtgtcttaaataggctcgtgaatagctgaagaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21327197 |
gagtttgtatatgtgagactgaaaagagaggttttatggtagattggtgtaaaagggttgaaaataagtgtcttaaataggctcgtgaatagctgaagaa |
21327296 |
T |
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| Q |
214 |
tgcagatatttttacagctcattggtatagt |
244 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
21327297 |
tgcagatatttttacagctcattggtatagt |
21327327 |
T |
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