View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_352 (Length: 248)
Name: NF9288A_low_352
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_352 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 50386238 - 50386462
Alignment:
| Q |
6 |
acagaaaagaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatctcacctcactcatcatatttctccatccaccaactagtt |
105 |
Q |
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| T |
50386238 |
acagaaaagaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatttcacctcactcatcatatttctccatccaccaactagtt |
50386337 |
T |
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| Q |
106 |
tcccaacaaaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagtt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386338 |
tcccaacaaaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagtt |
50386437 |
T |
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| Q |
206 |
gtatccattagatatggacattatt |
230 |
Q |
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||||||||||||||||||||||||| |
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| T |
50386438 |
gtatccattagatatggacattatt |
50386462 |
T |
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