View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_391 (Length: 243)
Name: NF9288A_low_391
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_391 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 15116156 - 15116365
Alignment:
| Q |
19 |
attcctgaagctacataggataaaactattgctgctcctgcatggttatgagcttcttgaccagttagcacaaagattcctgcaccaattactgcaccaa |
118 |
Q |
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| T |
15116156 |
attcctgaagctacataggataagactattgctgctcctgcatggttatgagcttcttgaccagttagcacaaagattcctgcaccaattactgcaccaa |
15116255 |
T |
|
| Q |
119 |
agccaaaccaaatcaagtcccaccaattgagacattttttcatttcattctcactttgtttcttaagctcatgtgtctcagtggcatcgtctgatctggt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
15116256 |
agccaaaccaaatcaagtcccaccaattgagacattttttcatttcattctcactttgtttcttaagctcatgtgtctcagtggcatcatctgatctggt |
15116355 |
T |
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| Q |
219 |
ctgaacacga |
228 |
Q |
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|||||||||| |
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| T |
15116356 |
ctgaacacga |
15116365 |
T |
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