View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288A_low_487 (Length: 230)
Name: NF9288A_low_487
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288A_low_487 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 40289791 - 40289987
Alignment:
| Q |
1 |
aaagaatgtagaatgcattaatttgaattgtgcttgattatctttacttttttgtaaggaaagaggacaactaataataagtttttctgtttgttttttg |
100 |
Q |
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| T |
40289791 |
aaagaatgtagaatgcattaatttgaattgtgtttgattatctttacttttttgtaaggaaagaggacaactaataataagtttttctgtttgttttttg |
40289890 |
T |
|
| Q |
101 |
tgtacatacacgttacatattctgttgcattcaaaatttcacgcttcttgtattatgcaattttaagttgcattctattttgtatatatcttttacc |
197 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40289891 |
tgtacatacacgttacatcttctgttgcattcaaaatttcacgcttcttgtattttgcaattttaagttgcattctattttgtatatatcttttacc |
40289987 |
T |
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