View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9288A_low_92 (Length: 363)

Name: NF9288A_low_92
Description: NF9288A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9288A_low_92
NF9288A_low_92
[»] chr4 (13 HSPs)
chr4 (21-357)||(22106076-22106413)
chr4 (21-357)||(1908-2245)
chr4 (21-357)||(15249448-15249785)
chr4 (24-357)||(15264856-15265190)
chr4 (29-357)||(15303151-15303480)
chr4 (24-357)||(6291-6624)
chr4 (24-357)||(11921079-11921415)
chr4 (24-281)||(9193261-9193518)
chr4 (42-357)||(13623478-13623794)
chr4 (27-89)||(10641097-10641159)
chr4 (43-205)||(45242771-45242934)
chr4 (135-205)||(16641482-16641552)
chr4 (43-91)||(18288255-18288303)
[»] chr1 (14 HSPs)
chr1 (21-357)||(22842838-22843175)
chr1 (21-357)||(21803466-21803803)
chr1 (21-357)||(20232635-20232972)
chr1 (21-357)||(23500414-23500751)
chr1 (68-357)||(52952574-52952864)
chr1 (28-357)||(19786881-19787210)
chr1 (21-203)||(8952333-8952515)
chr1 (21-357)||(19878719-19879056)
chr1 (159-357)||(16399657-16399856)
chr1 (225-357)||(8952199-8952331)
chr1 (43-205)||(20071599-20071761)
chr1 (45-199)||(27043067-27043221)
chr1 (21-97)||(15299894-15299970)
chr1 (43-91)||(21782956-21783004)
[»] chr8 (19 HSPs)
chr8 (22-357)||(8327614-8327950)
chr8 (21-357)||(8309584-8309921)
chr8 (21-357)||(22094357-22094694)
chr8 (21-357)||(21822489-21822826)
chr8 (21-357)||(21951183-21951520)
chr8 (21-357)||(22038282-22038620)
chr8 (21-357)||(18400406-18400743)
chr8 (24-357)||(22286122-22286457)
chr8 (111-357)||(25468508-25468754)
chr8 (113-357)||(22827122-22827365)
chr8 (24-120)||(22819334-22819430)
chr8 (42-205)||(19292258-19292421)
chr8 (27-100)||(23880721-23880794)
chr8 (40-205)||(25398095-25398260)
chr8 (135-246)||(23219377-23219488)
chr8 (24-124)||(15204636-15204736)
chr8 (66-233)||(14877065-14877232)
chr8 (44-205)||(19998485-19998646)
chr8 (45-205)||(21857460-21857620)
[»] scaffold0112 (1 HSPs)
scaffold0112 (21-357)||(6414-6751)
[»] chr5 (23 HSPs)
chr5 (21-357)||(24967963-24968300)
chr5 (21-357)||(16102856-16103193)
chr5 (21-357)||(20617277-20617614)
chr5 (21-357)||(20442966-20443303)
chr5 (21-357)||(30767893-30768230)
chr5 (21-357)||(22322222-22322559)
chr5 (21-357)||(25120961-25121298)
chr5 (21-357)||(25180052-25180389)
chr5 (21-357)||(26774064-26774401)
chr5 (21-357)||(21383389-21383726)
chr5 (161-342)||(21275387-21275568)
chr5 (173-329)||(21276915-21277074)
chr5 (42-256)||(22943519-22943733)
chr5 (43-261)||(24216097-24216315)
chr5 (43-256)||(20600172-20600385)
chr5 (43-256)||(20606469-20606682)
chr5 (43-256)||(20612788-20613001)
chr5 (43-205)||(20795138-20795300)
chr5 (43-205)||(23604524-23604686)
chr5 (45-205)||(21284632-21284792)
chr5 (135-205)||(18068642-18068712)
chr5 (43-205)||(23714394-23714556)
chr5 (43-100)||(18068550-18068607)
[»] chr6 (26 HSPs)
chr6 (21-353)||(20020903-20021236)
chr6 (21-357)||(20165314-20165651)
chr6 (21-357)||(24860008-24860344)
chr6 (21-357)||(22771901-22772238)
chr6 (21-357)||(2648390-2648727)
chr6 (21-357)||(19562523-19562860)
chr6 (21-357)||(23613560-23613897)
chr6 (21-357)||(35244323-35244660)
chr6 (24-353)||(25775944-25776275)
chr6 (21-282)||(18279458-18279719)
chr6 (21-200)||(8736407-8736586)
chr6 (133-353)||(11234624-11234846)
chr6 (24-357)||(23522540-23522873)
chr6 (24-281)||(18628551-18628809)
chr6 (29-282)||(17792694-17792948)
chr6 (24-357)||(22600006-22600340)
chr6 (241-357)||(18007183-18007300)
chr6 (269-357)||(8728763-8728851)
chr6 (42-288)||(23345887-23346132)
chr6 (27-100)||(25648794-25648867)
chr6 (21-82)||(11234559-11234620)
chr6 (27-100)||(25785358-25785431)
chr6 (42-205)||(25950422-25950585)
chr6 (27-100)||(5151586-5151659)
chr6 (27-89)||(15694528-15694590)
chr6 (43-100)||(18845633-18845690)
[»] chr2 (23 HSPs)
chr2 (21-357)||(16770763-16771100)
chr2 (21-357)||(24800102-24800439)
chr2 (21-357)||(27622709-27623046)
chr2 (21-357)||(27618682-27619019)
chr2 (21-357)||(112624-112960)
chr2 (24-357)||(22289335-22289669)
chr2 (21-342)||(13974454-13974776)
chr2 (21-342)||(18993089-18993412)
chr2 (29-223)||(25374875-25375069)
chr2 (21-357)||(19982-20319)
chr2 (24-173)||(23013062-23013211)
chr2 (24-357)||(24176322-24176657)
chr2 (21-357)||(21343138-21343474)
chr2 (113-357)||(25137879-25138123)
chr2 (203-357)||(23013208-23013363)
chr2 (24-103)||(25142790-25142869)
chr2 (24-188)||(24370254-24370418)
chr2 (21-265)||(29952669-29952912)
chr2 (42-205)||(16004-16167)
chr2 (43-205)||(25359409-25359571)
chr2 (51-100)||(23635010-23635059)
chr2 (42-261)||(25353130-25353349)
chr2 (28-121)||(25592197-25592290)
[»] chr7 (21 HSPs)
chr7 (21-357)||(13668952-13669289)
chr7 (21-357)||(18598086-18598420)
chr7 (21-357)||(18275140-18275477)
chr7 (21-357)||(16470271-16470607)
chr7 (21-357)||(13653120-13653457)
chr7 (21-357)||(16527123-16527460)
chr7 (21-357)||(11966850-11967187)
chr7 (21-358)||(12388036-12388374)
chr7 (21-357)||(12736771-12737108)
chr7 (42-265)||(4464484-4464706)
chr7 (42-357)||(8785907-8786223)
chr7 (42-205)||(543876-544039)
chr7 (42-261)||(14228638-14228857)
chr7 (42-261)||(16329569-16329788)
chr7 (42-256)||(13735251-13735465)
chr7 (43-205)||(16153674-16153836)
chr7 (43-205)||(23511352-23511514)
chr7 (135-205)||(14546831-14546901)
chr7 (43-205)||(13435-13597)
chr7 (27-89)||(11927470-11927532)
chr7 (45-99)||(15296293-15296347)
[»] chr3 (30 HSPs)
chr3 (21-357)||(11879106-11879443)
chr3 (21-357)||(12198235-12198572)
chr3 (21-357)||(10142174-10142511)
chr3 (21-357)||(12191591-12191928)
chr3 (21-357)||(13192158-13192495)
chr3 (21-357)||(10164944-10165281)
chr3 (21-357)||(15640190-15640527)
chr3 (21-357)||(15633676-15634013)
chr3 (21-357)||(13140942-13141279)
chr3 (21-353)||(13511130-13511463)
chr3 (21-357)||(672-1009)
chr3 (21-357)||(13666141-13666479)
chr3 (21-357)||(13201445-13201782)
chr3 (145-357)||(13604193-13604406)
chr3 (28-357)||(14070323-14070653)
chr3 (137-357)||(12159573-12159794)
chr3 (155-357)||(14455768-14455971)
chr3 (24-353)||(17216010-17216338)
chr3 (210-357)||(12380327-12380475)
chr3 (21-107)||(15233174-15233260)
chr3 (21-107)||(14455972-14456058)
chr3 (43-205)||(20151777-20151939)
chr3 (43-205)||(22168706-22168868)
chr3 (43-205)||(10606929-10607091)
chr3 (27-97)||(15950328-15950398)
chr3 (43-205)||(20557375-20557537)
chr3 (27-73)||(55501260-55501306)
chr3 (54-89)||(13052589-13052624)
chr3 (43-100)||(3249078-3249135)
chr3 (43-100)||(26174017-26174074)
[»] scaffold0535 (1 HSPs)
scaffold0535 (21-340)||(6809-7129)
[»] scaffold0078 (1 HSPs)
scaffold0078 (21-357)||(25616-25953)
[»] scaffold0042 (2 HSPs)
scaffold0042 (21-357)||(16052-16389)
scaffold0042 (21-357)||(55286-55623)
[»] scaffold0079 (1 HSPs)
scaffold0079 (50-331)||(2278-2560)
[»] scaffold0630 (2 HSPs)
scaffold0630 (21-349)||(391-719)
scaffold0630 (21-349)||(6557-6885)
[»] scaffold0346 (1 HSPs)
scaffold0346 (21-357)||(1092-1429)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-357)||(187330-187667)
scaffold0012 (135-245)||(15299-15409)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-357)||(368127-368464)
[»] scaffold0091 (3 HSPs)
scaffold0091 (21-342)||(28355-28678)
scaffold0091 (21-342)||(24158-24481)
scaffold0091 (21-357)||(48173-48510)
[»] scaffold0634 (1 HSPs)
scaffold0634 (21-357)||(1410-1747)
[»] scaffold0164 (1 HSPs)
scaffold0164 (128-357)||(34696-34926)
[»] scaffold1589 (1 HSPs)
scaffold1589 (34-357)||(1279-1603)
[»] scaffold0381 (1 HSPs)
scaffold0381 (21-357)||(16242-16570)
[»] scaffold0506 (1 HSPs)
scaffold0506 (21-309)||(6498-6786)
[»] scaffold0031 (1 HSPs)
scaffold0031 (21-357)||(24954-25290)
[»] scaffold0060 (1 HSPs)
scaffold0060 (21-181)||(75082-75242)
[»] scaffold0404 (1 HSPs)
scaffold0404 (21-175)||(2789-2944)
[»] scaffold1092 (1 HSPs)
scaffold1092 (24-357)||(331-665)
[»] scaffold1058 (1 HSPs)
scaffold1058 (24-357)||(1708-2042)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-305)||(521868-522150)
[»] scaffold0020 (1 HSPs)
scaffold0020 (193-357)||(116240-116405)
[»] scaffold0213 (1 HSPs)
scaffold0213 (28-351)||(22708-23032)
[»] scaffold0909 (1 HSPs)
scaffold0909 (21-95)||(750-824)
[»] scaffold0064 (1 HSPs)
scaffold0064 (37-102)||(39279-39344)
[»] scaffold0014 (1 HSPs)
scaffold0014 (45-265)||(169308-169528)
[»] scaffold0175 (1 HSPs)
scaffold0175 (66-265)||(11313-11512)
[»] scaffold0221 (1 HSPs)
scaffold0221 (42-265)||(647-866)
[»] scaffold0029 (1 HSPs)
scaffold0029 (43-205)||(119031-119193)
[»] scaffold0841 (1 HSPs)
scaffold0841 (27-88)||(2515-2576)
[»] scaffold1475 (1 HSPs)
scaffold1475 (27-89)||(751-813)
[»] scaffold2060 (1 HSPs)
scaffold2060 (27-89)||(599-661)
[»] scaffold1184 (1 HSPs)
scaffold1184 (311-357)||(2390-2436)


Alignment Details
Target: chr4 (Bit Score: 330; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 22106076 - 22106413
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106076 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 22106175  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106176 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 22106275  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttt-ccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22106276 cattacttcatgggacgatatgaggcgagcattcctcgcccgattttcccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 22106375  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22106376 aaagatggggagtctctctatgaggcgtgggagcgttt 22106413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 2245 - 1908
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2245 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 2146  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2145 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 2046  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgattttcc-ccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2045 cattacttcatgggacgatatgaggcgagcattcctcgcccgattttcccccccatctaaaacagctaaacttagagaccaaattacgcgtttcaatcaa 1946  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  1945 aaagatggggagtctctctatgaggcgtgagagcgttt 1908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 15249448 - 15249785
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15249448 atcaagcctgcactactccatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 15249547  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  15249548 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatagagttagcgcttggttccattccctagaagtcggttc 15249647  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||    
T  15249648 catcacttcatggaacgatatgaggcgagcattccttgcctgatttttccccccatctaaaaccgctaaacttagagatcaaatcacgcgtttcaatcaa 15249747  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15249748 aaagatggggagtctctctatgaggcgtgggagcgttt 15249785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 15265190 - 15264856
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15265190 aagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagacttagtggca 15265091  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15265090 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 15264991  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||    
T  15264990 cacttcatgggacgatatgaggtgagcattccttgcccgattttttcccccatctaaaaccgctaaacttagagatcaaatcacgcggttcaatcaaaaa 15264891  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||||| || |||||||||||    
T  15264890 gatggggagtctctctatgaagcatgggagcgttt 15264856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 29 - 357
Target Start/End: Original strand, 15303151 - 15303480
Alignment:
Q  29 tgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccata 128  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15303151 tgcactactcaatttggtgcagcaaaatcagttttctggatcacctattgaggatccaaatctccatatttcttccttccttagactcagtggcaccata 15303250  T
Q  129 aaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattactt 228  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15303251 aaagagaaccaagaagccgcaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcactt 15303350  T
Q  229 catgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatgg 327  Q
     ||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||||||    
T  15303351 aatgggacgatatgaggcgagcattccttgcccgattttttcccccatctaaaaccgctaaacttagagatcaaatcacgcatttcaatcaaaaagatgg 15303450  T
Q  328 ggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||| | ||||||||||||||    
T  15303451 ggagtctctctataaagcgtgggagcgttt 15303480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 6624 - 6291
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  6624 aagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctc-atatctcttccttcattagactcagtggca 6526  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  6525 ctataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattcccaagaagtcggttccat 6426  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     |||||||||||  | ||||||||||||||||| |||||||| || ||||| |||||||| || || || ||||||||||| ||||| ||||| ||||||    
T  6425 cacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccttctaaaaccgccaaactaagagaccaaatcacgcggttcaaccaaaaa 6326  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||||| ||||| ||| ||||    
T  6325 gatggggagtctctctatgatgcgtgagagtgttt 6291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 11921415 - 11921079
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    ||||||| |||||| || || |||||||||||||||||||  |||| ||||||||||||||| ||||| |||||||   | ||  | ||||||||||| |    
T  11921415 aagcctgaactacttaacttggtgcagcaaaaccagtttttcggattacccactgaggatccgaatctgcatatttaaacttttttaagactcagtggaa 11921316  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    || | ||||  ||| |||| |||||||| || || |||||||| ||||||||||||||||||||| | ||||||||||||||  |  |||| ||||||||    
T  11921315 ccttgaaagctaactaagaggccgtaaggctacacctctttcctttttccttaagggatagagctagtgcttggttccattcattgaaagttggttccat 11921216  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaac--agctaagcttagagaccaaattacgcgtttcaatcaaa 320  Q
     |||||||||||  |  |||||| ||||||||| |||||||| || ||||| ||||||||   |||||  | || || ||||| || || |||| ||| |    
T  11921215 cacttcatgggatcaactgaggcaagcattccttgcccgattatttcccccttctaaaactacgctaaattgagggatcaaatcacacgattcactcaga 11921116  T
Q  321 aagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||| ||||| ||||| | ||||||| ||||    
T  11921115 aagatggggaatctctttatgatgtgtgggagagttt 11921079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 281
Target Start/End: Original strand, 9193261 - 9193518
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| |  || |||||||||| | |||||| |||||||||   ||||||||||||||| || || ||  | ||| | |||||||||   |    
T  9193261 aagcctgcactacttatcttggtgcagcaaatc-agttttatggatcaccttatgaggatccaaatctgcaaatctcaactttcttaagactcagtataa 9193359  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    ||   ||||| || ||||| | |||||| ||  | || ||||||||||||||||||||||||||| | ||||||||||||||  ||||||| ||||||||    
T  9193360 cctataaagaaaatcaagaggtcgtaaggctgtacctttttcccttttccttaagggatagagctagtgcttggttccattctttagaagttggttccat 9193459  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaa 281  Q
     ||||||||| |  | ||||||||||||||||| |||||||| || ||||| |||||||    
T  9193460 cacttcatggaatcaaatgaggcgagcattccttgcccgattctttcccccttctaaaa 9193518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 357
Target Start/End: Original strand, 13623478 - 13623794
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||| ||||| || ||||  | |||||| ||||||||||| ||| | ||||||||  | || || ||||||||||| ||| | || |  |||||||    
T  13623478 ttagtgcatcaaaatcaatttttcgaatcaccaactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaag 13623577  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | || |||||  | || |||||||| ||||||||||||||||||||| | |||||||| |||||  | ||| ||||||| || ||||||||| || | ||    
T  13623578 aggctgtaaggatgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattggaaatcggttctatcacttcatggcaccaaat 13623677  T
Q  242 gaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctat 340  Q
    ||||| ||| || || |||||||| || ||||  |||||||| ||| |  | ||  | ||||| || |  |||| ||||||||||||||| ||||| ||     
T  13623678 gaggcaagcttttcttgcccgattctttccccattctaaaactgctcaattaaggaatcaaatcacacaattcactcaaaaagatggggaatctctttac 13623777  T
Q  341 gaggcgtgggagcgttt 357  Q
    || |||||||| |||||    
T  13623778 gatgcgtgggaccgttt 13623794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 10641097 - 10641159
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||| | ||| ||||| |||||||||||||||||||||||  |||| |||||||||    
T  10641097 cctgcactactaattttggtgcaacaaaaccagttttctggatcaccttctgaagatccaaat 10641159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 45242934 - 45242771
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatattt-cttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| |||   |  ||  | ||||||||||| ||  | || || |||||||    
T  45242934 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttgaattttttttaagactcagtggaactttgaaggaaaaccaag 45242835  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    | |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  45242834 aggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 45242771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 16641552 - 16641482
Alignment:
Q  135 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    |||||||| ||||||||||| || |||||||| || || || |||||||||||| | |||||||| |||||    
T  16641552 aaccaagaggccgtaagactgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 16641482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 18288255 - 18288303
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatct 91  Q
    ||||||||||||| || ||||  |||||||||||||||||||| |||||    
T  18288255 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatct 18288303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 330; Significance: 0; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 22842838 - 22843175
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22842838 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 22842937  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22842938 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 22843037  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22843038 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 22843137  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22843138 aaagatggggagtctctctatgaggcgtgggagcgttt 22843175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 21803803 - 21803466
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21803803 atcaagcctgcactactcaatttagtgcagcaaaactagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 21803704  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21803703 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 21803604  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21803603 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 21803504  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21803503 aaagatggggagtctctctatgaggcgtgggagcgttt 21803466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 20232635 - 20232972
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20232635 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttacttagactcagtg 20232734  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20232735 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatagagctagcgcttggttccattccctagaagtcggttc 20232834  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||| || || |||||||||    
T  20232835 catcacttcatgggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaacttagagaccaaatcacacggttcaatcaa 20232934  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20232935 aaagatggggagtctctctatgaggcgtgggagcgttt 20232972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 23500751 - 23500414
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23500751 atcaagcctgcactacttaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 23500652  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23500651 gcaccataaaagagaaccaagaagccgttagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 23500552  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgattt-tccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||| |||||||| ||||| ||||| |||||||||    
T  23500551 catcacttcatgggacgatatgaggcgagcattccttgcccgatttattcccccatctaaaaccgctaaacttagagatcaaatcacgcggttcaatcaa 23500452  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||||||||||||||| |||||||| |||||    
T  23500451 aaggatggggagtctctctatgaagcgtgggaacgttt 23500414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 68 - 357
Target Start/End: Complemental strand, 52952864 - 52952574
Alignment:
Q  68 atcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttccc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  52952864 atcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcacaataaaagagaaccaagaagccgtaagacttcatctctttcct 52952765  T
Q  168 ttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-t 266  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||  | |||||||||||||||||  ||||||| |    
T  52952764 ttttccttaagggatagagctagcgcttgattccattccctagaagtcggttccatcacttcatgggatcaaatgaggcgagcattccttacccgattct 52952665  T
Q  267 tccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    | ||||| |||||||| || || || ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  52952664 ttcccccctctaaaaccgccaaactaagagaccaaatcacgcggttcaatcaaaaagatggggagtctctctatgatgcgtgagagagttt 52952574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 28 - 357
Target Start/End: Complemental strand, 19787210 - 19786881
Alignment:
Q  28 ctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccat 127  Q
    ||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| | ||| | ||||||||| |||| ||    
T  19787210 ctgcactactcaatttgatgcagcaaaatcagttttccagatcacccactgaggatccaaatctccatatctctactttcttaagactcagtagcactat 19787111  T
Q  128 aaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattact 227  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||  |||||| | |||||||| |||    
T  19787110 aaaagagaaccaagaagccgtaagacttcatctttttcccttttcgttaagggatagagctagcgctttgttccattttctagaaattggttccatcact 19787011  T
Q  228 tcatgggacgatatgaggcgagcattcctcgcccgattttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatgg 327  Q
    ||||||||  | ||||||||||||||| |||||||||| |  |||| |||||||  | ||| || ||||||||||| || || || ||||||||||||||    
T  19787010 tcatgggatcaaatgaggcgagcattcatcgcccgattctttccccctctaaaattgataaactaagagaccaaatcacacgatttaatcaaaaagatgg 19786911  T
Q  328 ggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||| ||||| ||||||||||||||    
T  19786910 ggagtctctttatgatgcgtgggagcgttt 19786881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 8952515 - 8952333
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||    
T  8952515 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacctactgaggatccaaatctccatatttcttccttcttaagattcagtg 8952416  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccat 203  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  8952415 gcactataaaagagaaccaagaagccgtaagacttaatctctttccctttttcttaagggatagagctagcgcttggttccat 8952333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 19879056 - 19878719
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||||||||| ||||| ||    || || ||| ||||||    
T  19879056 atcaagcctgcactacttaatttggtgcagcaaaatcagttttctggatcgcccgctgaggatccaaatctacatatctcaatttttctaagaatcagtg 19878957  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
      ||| | |||||||| |||||||| ||||| || || |||||||| || |||||||||||||||||| | ||||||||||||||  | ||||| |||||    
T  19878956 aaaccttgaaagagaatcaagaagctgtaaggctgcacctctttcctttctccttaagggatagagctagtgcttggttccattcattggaagttggttc 19878857  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||  | ||||||| ||||||||| |||||||| || ||||| |||||||| |||||  | ||||||||||| ||  | |||||| ||    
T  19878856 cattacttcatgggatcaaatgaggcaagcattccttgcccgattctttcccccctctaaaactgctaaattgagagaccaaatcacaaggttcaataaa 19878757  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| || |||||||||||    
T  19878756 aaagatggggagtctctttatgatgcttgggagcgttt 19878719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 159 - 357
Target Start/End: Complemental strand, 16399856 - 16399657
Alignment:
Q  159 ctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcg 258  Q
    |||||||| ||||||||||||||||||||| | || || || |||||  ||||||| ||||| || |||||||||||| | ||||||| | ||||||| |    
T  16399856 ctctttcctttttccttaagggatagagctagtgcatgttttcattcattagaagttggttctatcacttcatgggaccaaatgaggcaaccattccttg 16399757  T
Q  259 cccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||| || ||||| |||||||| ||| |  | ||||| ||||| ||  | |||| ||||| ||||||||| ||||| || || ||||||||| ||||    
T  16399756 cccgattctttcccccttctaaaactgctcaattgagagatcaaataacatgattcactcaaagagatggggaatctctttacgatgcgtgggagtgttt 16399657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 8952331 - 8952199
Alignment:
Q  225 acttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaag 323  Q
    |||||||||||  | ||||||||||||||||| |||||||| || |||||||||||||| | ||| || ||||| ||||| ||||| |||||| | ||||    
T  8952331 acttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccatctaaaaccgataa-ctaagagagcaaatcacgcggttcaattagaaag 8952233  T
Q  324 atggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||| |||||||| ||||| | ||||||| ||||    
T  8952232 atggagagtctctatatgatgtgtgggagtgttt 8952199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 20071599 - 20071761
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  20071599 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 20071698  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  20071699 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 20071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 27043067 - 27043221
Alignment:
Q  45 gtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaag 144  Q
    ||||||||||| || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||  | || |  |||||||| |    
T  27043067 gtgcagcaaaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagagg 27043166  T
Q  145 ccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggtt 199  Q
    ||||||| || || |||||||| || || || |||||||||||| | ||||||||    
T  27043167 ccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtt 27043221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 15299894 - 15299970
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatat 97  Q
    ||||| ||||| ||||| ||  ||||||| ||||| || ||||||||||| ||| | ||||||||||| ||||||||    
T  15299894 atcaaacctgcgctacttaacatagtgcaacaaaatcaattttctggatccccctccgaggatccaaacctccatat 15299970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 21783004 - 21782956
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatct 91  Q
    ||||||||||||| || ||||  |||||||||||||||||||| |||||    
T  21783004 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatct 21782956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 22 - 357
Target Start/End: Complemental strand, 8327950 - 8327614
Alignment:
Q  22 tcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtgg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8327950 tcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtgg 8327851  T
Q  122 caccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8327850 caccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttcc 8327751  T
Q  222 attacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaa 320  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8327750 attacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaa 8327651  T
Q  321 aagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||||||||||||||||||||||    
T  8327650 aagatggggagtctctctatgaggcgtgggagcgttt 8327614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 8309584 - 8309921
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8309584 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 8309683  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8309684 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 8309783  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8309784 cattacttcatgggacgatatgagacgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 8309883  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8309884 aaagatggggagtctctctatgaggcgtgggagcgttt 8309921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 22094357 - 22094694
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22094357 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccacatctccatatttcttccttccttagactcagtg 22094456  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22094457 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 22094556  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  22094557 catcacttcatgggacgataagaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaacttagagatcaaattactcgtttcaatcaa 22094656  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  22094657 aaagatggggaatctctctatgaggcgtgggagcgttt 22094694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 21822489 - 21822826
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21822489 atcaaacctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 21822588  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  21822589 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattcccgagaagtcggttc 21822688  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||    
T  21822689 cattacttcatgggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaacttagagagcaaatcacgcggttcaatcaa 21822788  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||||||||||||||| |||||||| |||||    
T  21822789 aaggatggggagtctctctatgaagcgtgggaacgttt 21822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 21951183 - 21951520
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21951183 atcaagcctgcactactccatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagcg 21951282  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21951283 gcaccataaaagagaaccaagaagccttaagactccatctctttcccttctccttaagggatagagctagcgcttggttccattccctagaagtcggttc 21951382  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| |||||||| ||||| | ||| |||||||||    
T  21951383 catcacttcatgggacgatatgaggcgagcactccttgcccgatttttccccccatctaaaaccgctaaacttagagatcaaatcatgcggttcaatcaa 21951482  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21951483 aaagatggggagtctctctatgaggcgtgggagcgttt 21951520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 22038620 - 22038282
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttcctta-gactcagt 119  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  22038620 atcaagcttgcactactcaatttggtgcagcaaaatcagttttctggatcacccactaaggattcaaatctccatatttcttccttccttaagactcagt 22038521  T
Q  120 ggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggtt 219  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22038520 ggcgccataaaagagaaccaagaagctgtaagacttcatctctttcccttttccttaagggatagagctagagcttggttccattccctagaagtcggtt 22038421  T
Q  220 ccattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatca 318  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||    
T  22038420 ccatcacttcatgggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaacttagagatcaaattacgcggttcaatca 22038321  T
Q  319 aaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  22038320 aaaagatggggagtatctctatgaagcgtgggagcgttt 22038282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 18400406 - 18400743
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18400406 atcaagcttgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttcctaagactcagtg 18400505  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18400506 gcaccataaaagagaactaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttctattccctagaagtcggttc 18400605  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||| ||||||||| ||| |||| || ||||| |||||||| || ||||| ||||| ||||| ||||| || || |||    
T  18400606 catcacttcatgggatcaaatgaggcaagcattccttgcctgattctttcccccctctaaaaccgccaagctaagagatcaaatcacgcggtttaaccaa 18400705  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  18400706 aaagatggggagtctctctatgatgcgtgggagcgttt 18400743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 24 - 357
Target Start/End: Original strand, 22286122 - 22286457
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| | ||| | |||||||||||||    
T  22286122 aagcctgcactactcaatttggtgcagcaaaaccagttttccgaatcacccactgaggatccaaatctccatatctctactttcttaagactcagtggca 22286221  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    | ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  22286222 ctataaaagagaaccaagaagccgtaaaacttcatctttttcccttttccttaagggatagagctagcgcttggttccattctctagaagttggttccat 22286321  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaa 321  Q
     |||||||||||  | ||||||||||| |||||| | ||||  ||||||||| |||||||| ||||| || ||||||||||| || || || ||||||||    
T  22286322 cacttcatgggatcaaatgaggcgagcgttcctctctcgattctttccccccctctaaaactgctaaactaagagaccaaatcacacggtttaatcaaaa 22286421  T
Q  322 agatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||| ||||| ||||||||| ||||    
T  22286422 agatggggagtctctttatgatgcgtgggagtgttt 22286457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 111 - 357
Target Start/End: Original strand, 25468508 - 25468754
Alignment:
Q  111 agactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctag 210  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25468508 agacttagtggcaccataaaagagaaccaagaagtcgtaatacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctag 25468607  T
Q  211 aagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgattttccccccatctaaaacagctaagcttagagaccaaattacgcgt 310  Q
    ||||||||||||| |||| ||||||  | |||||||||||||||||  ||||||| |  ||||||||||||| ||||| || ||||| ||||| |||||     
T  25468608 aagtcggttccatcactttatgggatcaaatgaggcgagcattccttccccgattctttccccatctaaaaccgctaaactaagagatcaaatcacgcgg 25468707  T
Q  311 ttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  25468708 ttcaaccaaaaagatggggagtctctatatgatgcgtgggagcgttt 25468754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 113 - 357
Target Start/End: Original strand, 22827122 - 22827365
Alignment:
Q  113 actcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaa 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  | ||||||    
T  22827122 actcagtggcactataaaagagaaccaagaagccgtaagacttcatctttttcccttttccttaagggatagagctagcgcttggttcca--ctctagaa 22827219  T
Q  213 gtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtt 311  Q
    || |||||||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| ||||||||  |||| || ||||||||||| |  || |    
T  22827220 gttggttccatcacttcatgggatcaaatgaggcgagcattccttgcccgattatttcccccctctaaaaccactaaactaagagaccaaatcagacggt 22827319  T
Q  312 tcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22827320 ttaatcaaaaagatggggagtctctttatgatgcgtgggagcgttt 22827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 22819334 - 22819430
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||    
T  22819334 aagcctgcactactcaattttgtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatctcttctttcttaagactcagtg 22819430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 19292421 - 19292258
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||||||||| || ||||  |||||||||||||||||||| ||| | | ||||||  | || || | ||||||||| ||  | || |  |||||||    
T  19292421 ttagtgcagcaaaatcaatttttcggatcacccactgaggatccgaattttcgtatttcaacttttctaaaactcagtggaactttgaaggcaaaccaag 19292322  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    | |||||||| || || |||||| | ||||||||||||||||||||| | |||||||| |||||    
T  19292321 aggccgtaaggctgcacctcttttctttttccttaagggatagagctagtgcttggtttcattc 19292258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 23880721 - 23880794
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||| | ||| || || ||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  23880721 cctgcactacttagtttggtacaacaaaaccagttttttgtatcacccactgaggatccaaatctgcatatttc 23880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 205
Target Start/End: Original strand, 25398095 - 25398260
Alignment:
Q  40 atttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaacca 139  Q
    |||||||||||||||| || ||||  |||||||| ||||||||||| ||||| ||||||||  | ||  | ||||||||||| ||| | || |  |||||    
T  25398095 atttagtgcagcaaaatcaatttttcggatcacctactgaggatccgaatcttcatatttcaacttttttaagactcagtggaaccttgaaggcaaacca 25398194  T
Q  140 agaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    ||| |  ||||| || || |||||||  ||||||||||||||||||||| | | |||||| |||||    
T  25398195 agagggtgtaaggctgcacctctttcttttttccttaagggatagagctagtgattggtttcattc 25398260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 23219488 - 23219377
Alignment:
Q  135 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatggg 234  Q
    |||||||| |||||||| || || |||||||| ||||||||||||||||||||| | || ||||| |||||  | ||||| ||||| || |||||||||     
T  23219488 aaccaagaggccgtaaggctacacctctttcctttttccttaagggatagagctagtgcatggtttcattcattggaagttggttctatcacttcatggt 23219389  T
Q  235 acgatatgaggc 246  Q
    || | |||||||    
T  23219388 accaaatgaggc 23219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15204636 - 15204736
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||| ||||| ||  ||||||||||||| || ||||  | || ||||||||||||||||||||| ||||| ||| ||||  | |||||||||||||    
T  15204636 aagcctgcgctacttaacatagtgcagcaaaatcaatttttcgaattacccactgaggatccaaatcttcatatctctacctttttgagactcagtggca 15204735  T
Q  124 c 124  Q
    |    
T  15204736 c 15204736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 14877232 - 14877065
Alignment:
Q  66 ggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttc 165  Q
    |||||||||||||||||||| ||| | ||||||||  | || || | ||||||||| ||  | || |  |||||| | |||||||| || ||||||||||    
T  14877232 ggatcacccactgaggatccgaattttcatatttcaacttttctaaaactcagtggaactttgaaggcaaaccaataggccgtaaggctgcatctctttc 14877133  T
Q  166 ccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgg 233  Q
    | ||||||||| ||||||||| | | | |||||| |||||  | ||||||||||| || | |||||||    
T  14877132 ctttttccttaggggatagaggtagtgtttggtttcattcattggaagtcggttctatcatttcatgg 14877065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 19998485 - 19998646
Alignment:
Q  44 agtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaa 143  Q
    |||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | ||||||||||| ||  | || |  ||||||||     
T  19998485 agtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagag 19998584  T
Q  144 gccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  19998585 gccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 19998646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 21857620 - 21857460
Alignment:
Q  45 gtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaag 144  Q
    ||||||||||| || |||| ||||||||||||||||||||| ||| | ||| ||||    ||  | ||||||||||| ||  | || |  |||||||| |    
T  21857620 gtgcagcaaaatcaattttttggatcacccactgaggatccgaattttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagagg 21857521  T
Q  145 ccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    ||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  21857520 ccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 21857460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 6414 - 6751
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6414 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 6513  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6514 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 6613  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6614 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 6713  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6714 aaagatggggagtctctctatgaggcgtgggagcgttt 6751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 326; Significance: 0; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 24968300 - 24967963
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968300 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 24968201  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968200 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 24968101  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24968100 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 24968001  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24968000 aaagatggggagtctctctatgaggcgtgggagcgttt 24967963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 16103193 - 16102856
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16103193 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 16103094  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16103093 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 16102994  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16102993 cattacttcatgggacgatatgaggcgagcattcctcgtccgatttttccccccatctaaaacagctaaacttagagaccaaattacgcgtttcaatcaa 16102894  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16102893 aaagatggggagtctctctatgaggcgtgggagcgttt 16102856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 20617277 - 20617614
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20617277 atcaagcctgcactactcaatttagtgcagcaaaactagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 20617376  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  20617377 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagtgctagcgcttggttccattccctagaagtcggttc 20617476  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20617477 cattacttcatgggacgatatgaggcaagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 20617576  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20617577 aaagatggggagtctctctatgaggcgtgggagcgttt 20617614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 20443303 - 20442966
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20443303 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcaatg 20443204  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20443203 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 20443104  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| || ||||| ||||| ||||| |||||||||    
T  20443103 catcacttcatgggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaactaagagatcaaatcacgcggttcaatcaa 20443004  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| || |||||| ||||    
T  20443003 aaagatggggagtctctctatgatgcatgggagtgttt 20442966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 30768230 - 30767893
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  30768230 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccaatgaggatccaaatctccatatttcttcattccttagactcagtg 30768131  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30768130 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 30768031  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||| || ||||| ||||| ||||| |||||||||    
T  30768030 catcacttcatgggacgatatgaggcgagcattccttgcccgattttttcccccatctaaaaccgctaaactaagagatcaaatcacgcggttcaatcaa 30767931  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  30767930 aaagatggggagtctctctatgatgcgtaggagcgttt 30767893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 22322559 - 22322222
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22322559 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 22322460  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22322459 gcactataaaagagaaccaagaagccataagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 22322360  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| |||||||| || || || ||||||||||| | ||| ||||| |||    
T  22322359 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccttctaaaaccgccaaactaagagaccaaatcatgcggttcaaccaa 22322260  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22322259 aaagatggggagtctctctatgatgcgtgggagcgttt 22322222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 25121298 - 25120961
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25121298 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 25121199  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25121198 gcactataaaagagaaccaagaagccgtaagacgtcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 25121099  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| |||||||| || || || ||||||||||| ||||| ||||| |||    
T  25121098 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccttctaaaaccgccaaactaagagaccaaatcacgcggttcaaccaa 25120999  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||||||||||||||| ||||||||||||||    
T  25120998 aatgatggggagtctctctatgatgcgtgggagcgttt 25120961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 25180389 - 25180052
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25180389 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 25180290  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25180289 gcactataaaagagaaccaagaagccgtaagacgtcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 25180190  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| |||||||| || || || ||||||||||| ||||| ||||| |||    
T  25180189 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccttctaaaaccgccaaactaagagaccaaatcacgcggttcaaccaa 25180090  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||||||||||||||| ||||||||||||||    
T  25180089 aatgatggggagtctctctatgatgcgtgggagcgttt 25180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 26774401 - 26774064
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26774401 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactaagtg 26774302  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26774301 gcacaataaaagagaaccaagaagccataagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 26774202  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||||||| |||||| |||||||| || ||||| |||||||| || || ||  |||||||||| || || ||||| |||    
T  26774201 catcacttcatgggatcaaatgaggcgagtattccttgcccgattctttcccccttctaaaaccgccaaactacgagaccaaatcacacggttcaaccaa 26774102  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  26774101 aaagatggggagtctctctatgatgcgtaggagcgttt 26774064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 21383389 - 21383726
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||| ||||||| || || ||||||||||| || ||||||||||| ||| |||||||||||||||| ||||| ||  | ||| | |||||||| |    
T  21383389 atcaagcctacactacttaacttggtgcagcaaaatcaattttctggatcgcccgctgaggatccaaatctgcatatctcaactttcttaagactcagcg 21383488  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    | ||  | |||| ||| |||||||||||||| || || |||||||| || |||||||||||||||||| | |||||||| |||||  ||||||| |||||    
T  21383489 gaactttgaaagcgaatcaagaagccgtaaggctgcacctctttcctttctccttaagggatagagctagtgcttggtttcattcattagaagttggttc 21383588  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||| | ||||||| |||||||| || ||||| |||||||| ||||| || ||||||||||| ||  | |||||| ||    
T  21383589 catgacttcatgggatcaaatgaggcaatcattccttgcccgattctttcccccctctaaaactgctaaactaagagaccaaatcacatggttcaataaa 21383688  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  21383689 aaagatggggagtctctttatgatgcgtgggagcgttt 21383726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 342
Target Start/End: Complemental strand, 21275568 - 21275387
Alignment:
Q  161 ctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcc 260  Q
    |||||||||||||||||||||||||||  ||||||||||||||| | |||||||| ||||||| |||||||||||  ||||||||| ||||||||| |||    
T  21275568 ctttcccttttccttaagggatagagcaagcgcttggttccatttcgtagaagtcagttccatcacttcatgggatcatatgaggcaagcattccttgcc 21275469  T
Q  261 cgattttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatga 342  Q
    ||||| |  |||||| |||||| ||||| || ||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||    
T  21275468 cgattctttccccatttaaaaccgctaaactaagagatcaaatcacgcggttcaaccaaaaagatggggaatctctatatga 21275387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 329
Target Start/End: Complemental strand, 21277074 - 21276915
Alignment:
Q  173 cttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccga---ttttcc 269  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||  | ||| ||||||||||| | ||||||   ||| ||    
T  21277074 cttaagggatagagctagcgcttggttccattccctagaagtcacttccatcacttcatgggatcaaatgcggcgagcattctttgcccgattctttccc 21276975  T
Q  270 ccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatgggg 329  Q
    |||||||||||||  |||| || ||||| ||||| ||||  ||||| |||||||||||||    
T  21276974 ccccatctaaaaccactaaactaagagatcaaatcacgcagttcaaccaaaaagatgggg 21276915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 256
Target Start/End: Original strand, 22943519 - 22943733
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||| ||||||||| || ||||| ||||||||||| |||||||| ||||| ||||||||    ||  | ||||||||||| ||| | || |  |||||||    
T  22943519 ttagcgcagcaaaatcaattttccggatcacccaccgaggatccgaatcttcatatttcaaaatttttaagactcagtggaaccttgaatgcaaaccaag 22943618  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  | ||||| ||||| || |||||||||||| | ||    
T  22943619 aggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattggaagttggttctatcacttcatgggaccaaat 22943718  T
Q  242 gaggcgagcattcct 256  Q
    ||||| | |||||||    
T  22943719 gaggcaaacattcct 22943733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 261
Target Start/End: Original strand, 24216097 - 24216315
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | ||||||||||| ||  | || |  ||||||||    
T  24216097 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaaga 24216196  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatg 242  Q
     |||||||| || || |||||||| |||||||||||||||| |||| | |||||||| |||||  |   | | ||||| || |||||||||||| | |||    
T  24216197 ggccgtaaggctgcacctctttcctttttccttaagggatatagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatg 24216296  T
Q  243 aggcgagcattcctcgccc 261  Q
    |||||||| ||||| ||||    
T  24216297 aggcgagctttccttgccc 24216315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 256
Target Start/End: Complemental strand, 20600385 - 20600172
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  20600385 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 20600286  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatg 242  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | |||    
T  20600285 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatg 20600186  T
Q  243 aggcgagcattcct 256  Q
    |||||||| |||||    
T  20600185 aggcgagctttcct 20600172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 256
Target Start/End: Complemental strand, 20606682 - 20606469
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  20606682 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 20606583  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatg 242  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | |||    
T  20606582 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatg 20606483  T
Q  243 aggcgagcattcct 256  Q
    |||||||| |||||    
T  20606482 aggcgagctttcct 20606469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 256
Target Start/End: Complemental strand, 20613001 - 20612788
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  20613001 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 20612902  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatg 242  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | |||    
T  20612901 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatg 20612802  T
Q  243 aggcgagcattcct 256  Q
    |||||||| |||||    
T  20612801 aggcgagctttcct 20612788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 20795300 - 20795138
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  20795300 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 20795201  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  20795200 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 20795138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 23604686 - 23604524
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||  | || |  ||||||||    
T  23604686 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaaga 23604587  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  23604586 ggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 23604524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 21284792 - 21284632
Alignment:
Q  45 gtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaag 144  Q
    ||||||||||| || ||||  |||||||||||||||||||| ||| | ||| ||||    ||  | ||||||||||| ||  | || |  |||||||| |    
T  21284792 gtgcagcaaaatcaatttttcggatcacccactgaggatccgaattttcatttttcaatttttttaagactcagtggaactttgaaggcaaaccaagagg 21284693  T
Q  145 ccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    ||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  21284692 ccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 21284632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 18068642 - 18068712
Alignment:
Q  135 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    |||||||| |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  18068642 aaccaagaggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 18068712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 23714556 - 23714394
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||| | ||| ||||  | || || ||||||||||| ||  | || |  ||||||||    
T  23714556 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaattttcatgtttcaacttttctaagactcagtggaactttgaaggcaaaccaaga 23714457  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  23714456 ggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 23714394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 18068550 - 18068607
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    
T  18068550 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttc 18068607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 322; Significance: 0; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 21 - 353
Target Start/End: Complemental strand, 20021236 - 20020903
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20021236 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 20021137  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20021136 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 20021037  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20021036 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 20020937  T
Q  320 aaagatggggagtctctctatgaggcgtgggagc 353  Q
    ||||||||||||||||||||||||||||||||||    
T  20020936 aaagatggggagtctctctatgaggcgtgggagc 20020903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 20165314 - 20165651
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20165314 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttcctcagactcagtg 20165413  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20165414 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 20165513  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20165514 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 20165613  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  20165614 aaagatggggaatctctctatgaggcgtgggagcgttt 20165651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 24860344 - 24860008
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24860344 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 24860245  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24860244 gcaccataaaagagaaccaagaagccgtaagacttcatctctttccc-tttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 24860146  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24860145 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 24860046  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  24860045 aaagatggggagtctctctatgaggtgtgggagcgttt 24860008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 22772238 - 22771901
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22772238 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcaatg 22772139  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  22772138 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaaaggatagagctagcgcttggttccattccctataagtcggttc 22772039  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22772038 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacacgtttcaatcaa 22771939  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  22771938 aaagatggggaatctctctatgaggcgtgggagcgttt 22771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 2648390 - 2648727
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||    
T  2648390 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggattcaaatccccatatttcttccttcttaagactcagtg 2648489  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  2648490 gcactataaaagagaaccaagaatccgtaagacttcatctctttccctttttcttaagggatagagctagcgcttagttccattccctagaagttggttc 2648589  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || ||||| ||||||||  |||| || ||||| ||||| ||||| |||||| ||    
T  2648590 catcacttcatgggatcaaatgaggcgagcattccttgcccgattatttcccccctctaaaaccactaaactaagagatcaaatcacgcggttcaattaa 2648689  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  2648690 aaagatggggagtctctttatgatgcgtgggagcgttt 2648727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 19562860 - 19562523
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  19562860 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatattacttccttcctaagactcagtg 19562761  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
     ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||    
T  19562760 acactataaaagagaaccaagaagccttaagacttcatctctttaccttttccttaagggatagagctagcgcttgtttccattccctcgaagttggttc 19562661  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||| |||  | ||||||||||||||||| |||||||| || ||||| ||||||||  |||| || ||||| ||||| ||||| |||||||||    
T  19562660 catcacttcataggatcaaatgaggcgagcattccttgcccgattctttcccccctctaaaaccactaaactaagagatcaaatcacgcggttcaatcaa 19562561  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| | ||||||||||||    
T  19562560 aaagatggggagtctctttatgatgtgtgggagcgttt 19562523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 23613897 - 23613560
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23613897 atcaagcctgcactattcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttatactcagtg 23613798  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  23613797 gcactataaaagagaaccaagaagtcgtgagactctatctctttcccttttccttaagggatagagctagtgcttggttccattccttagaagtcggttc 23613698  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| ||| |||| || || || ||||| || || ||||| ||||||||||| || || ||||  |||    
T  23613697 catcacttcatgggatcaaatgaggcgagcattccttgcctgattctttcctccctctaataccgccaagctaagagaccaaatcacacggttcagccaa 23613598  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  23613597 aaagatggggagtctctctatgatgcgtgggagcgttt 23613560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 35244323 - 35244660
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| | ||||| ||||    
T  35244323 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactaaggatccaaatctccatgtttattccttcttaagacttagtg 35244422  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||    
T  35244423 gcaccataaaagagaaccaagaagccataagacttcatctctttcccttttccttaagggatagagctagtgcttggttccattccttagaagttggttc 35244522  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || |||||||||||||| ||||| || ||| | |||||||| |  ||||| |||    
T  35244523 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccatctaaaaccgctaaactaagatatcaaattacacagttcaaccaa 35244622  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| | ||||||||||||    
T  35244623 aaagatggggagtctctatatgatgtgtgggagcgttt 35244660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 24 - 353
Target Start/End: Original strand, 25775944 - 25776275
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||    
T  25775944 aagcctgcactactcaatttggtgcagcataatcagttttctggatcacccactgaggatccaaatctccatatctcttctttcttaagactcagtggca 25776043  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  25776044 ctataaaagagaaccaagaagccgtaagacctcatctttttcccttttccttaagggatagagctagcgcttggttccattctctagaagttggttccat 25776143  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaa 321  Q
     |||||||||||  | ||||||||||||||||| |||||||  ||||||||| |||||||| ||||| || ||||||||||| || || || ||||||||    
T  25776144 cacttcatgggatcaaatgaggcgagcattccttgcccgattctttccccccctctaaaactgctaaactaagagaccaaatcacacggtttaatcaaaa 25776243  T
Q  322 agatggggagtctctctatgaggcgtgggagc 353  Q
    ||||| ||||||||| ||| | ||||||||||    
T  25776244 agatgtggagtctctttataatgcgtgggagc 25776275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 282
Target Start/End: Complemental strand, 18279719 - 18279458
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  18279719 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatctaaatctccatatttcttccttcctaagaatcagtg 18279620  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||    
T  18279619 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttcgttc 18279520  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgattttccccccatctaaaac 282  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| |  |||| ||||||||    
T  18279519 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttccccctctaaaac 18279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 8736586 - 8736407
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  8736586 atcaagcttgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttctttctttagactcagtg 8736487  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8736486 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttc 8736407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 133 - 353
Target Start/End: Original strand, 11234624 - 11234846
Alignment:
Q  133 agaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatg 232  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  11234624 agaagcaagaagccataagaattcatctctttcccttttccttaagggatagaactagcgcttggttccattccctagaagtcggttccatcacttcatg 11234723  T
Q  233 ggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatgggga 330  Q
    |||  | ||||||||||  || || |||||||  ||||||||| |||||||| || || || ||||||||||  ||||| ||||| ||||||||||||||    
T  11234724 ggatcaaatgaggcgagatttgcttgcccgattctttccccccttctaaaaccgccaaactaagagaccaaagcacgcggttcaaccaaaaagatgggga 11234823  T
Q  331 gtctctctatgaggcgtgggagc 353  Q
    |||||||||||| ||||||||||    
T  11234824 gtctctctatgatgcgtgggagc 11234846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 23522873 - 23522540
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||  | |||   ||||||||||| |    
T  23522873 aagcctgcactacttaacttggtgcggcaaaatcagttttctggatcacccactgaggatccaaatcttcatatttcaactttctcaagactcagtggaa 23522774  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    || | || | |||||||||||| |||||  | || |||||||| ||||||||||||||||||||| | ||||||||||||||  | ||||| ||||||||    
T  23522773 ccttgaaggcgaaccaagaagctgtaaggttgcacctctttcctttttccttaagggatagagctagtgcttggttccattcaatggaagttggttccat 23522674  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgattttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaag 323  Q
     |||||||||||  | ||||||| ||| ||||| |||||||||| ||||| ||||| ||  ||||  | || || ||||| || || |||| ||||||||    
T  23522673 cacttcatgggatcaaatgaggcaagcgttccttgcccgatttttcccccttctaagactactaaattgagggatcaaatcacacggttcactcaaaaag 23522574  T
Q  324 atggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||| | ||| ||||| | ||||||||||||    
T  23522573 atagggaatatctttatgatgtgtgggagcgttt 23522540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 24 - 281
Target Start/End: Original strand, 18628551 - 18628809
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||  | ||| | | ||  ||||| |    
T  18628551 aagcctgcactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggatcctaatctgcatatctcaactttcttaacacctagtggaa 18628650  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    || |  ||| ||| ||||||||| |||| || || |||||||| || |||||||||||||||||| | ||||||||||||||  | ||||| ||||||||    
T  18628651 ccttggaagcgaatcaagaagccctaaggctgcacctctttcctttctccttaagggatagagctagtgcttggttccattcattggaagttggttccat 18628750  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaa 281  Q
     |||||||||||  | ||||||  ||||||||| ||| |||| || ||||| |||||||    
T  18628751 cacttcatgggatcaaatgaggaaagcattccttgcctgattctttcccccttctaaaa 18628809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 282
Target Start/End: Complemental strand, 17792948 - 17792694
Alignment:
Q  29 tgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccata 128  Q
    |||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||  ||||| ||||||||  | ||  | ||||||| | | ||| |     
T  17792948 tgcactcctcaacttagtgcagcaaaaccagttttccggatcgcccactgaggatctgaatctgcatatttcaacttttttaagactcaatagaaccttg 17792849  T
Q  129 aaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattactt 228  Q
    || || |||||||  |||||||| || || |||||||||||||||||||||||||||||| | |||||||| |||||  | ||||| ||||  || ||||    
T  17792848 aaggaaaaccaaggggccgtaaggctgcacctctttcccttttccttaagggatagagctagtgcttggtttcattcatttgaagttggttatatcactt 17792749  T
Q  229 catgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaac 282  Q
     ||||||| | ||||||| ||||||||| || ||||| || ||||| ||||||||    
T  17792748 tatgggaccaaatgaggcaagcattccttgcacgattctttcccccttctaaaac 17792694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 22600340 - 22600006
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||| ||||| || ||||| ||||| ||| |||||||||||||||| ||||| ||  | ||  | ||| |||| || |    
T  22600340 aagcctgcactacttaacttggtgcaacaaaatcaattttcaggatcgcccgctgaggatccaaatctgcatatctcaacttttttaagaatcagcggaa 22600241  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
     | | |||| ||| ||||||| |||||| || || || ||||| || ||||||||||||| | || | ||||||||||||||  | ||||| ||||||||    
T  22600240 acttgaaagcgaatcaagaagtcgtaaggctgcacctatttcctttctccttaagggataaatctagtgcttggttccattcattggaagttggttccat 22600141  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     |||||||||||  | ||||||| || ||| || ||| | || || ||||| |||||||  ||||| || ||||||||||| || || ||||||||||||    
T  22600140 aacttcatgggatcaaatgaggcaagtatttcttgcctggttctttcccccctctaaaaatgctaaactaagagaccaaatcacacggttcaatcaaaaa 22600041  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||| ||||| | ||| ||||||||    
T  22600040 gatggggagtctctttatgatgtgtgagagcgttt 22600006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 18007183 - 18007300
Alignment:
Q  241 tgaggcgagcattcctcgcccgattt-tccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctcta 339  Q
    |||||||||||||||| ||||||||  |  ||||||||||||| ||||| || ||||| ||||||||||| ||||| |||||||||||||||||||| ||    
T  18007183 tgaggcgagcattccttgcccgattcctttccccatctaaaaccgctaaactaagagatcaaattacgcggttcaaccaaaaagatggggagtctcttta 18007282  T
Q  340 tgaggcgtgggagcgttt 357  Q
    ||| ||||||||||||||    
T  18007283 tgatgcgtgggagcgttt 18007300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 8728851 - 8728763
Alignment:
Q  269 cccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8728851 cccccatctaaaaccgctaaactaagagatcaaatcacgcggttcaatcaaaaagatggggagtctctctatgatgcgtgggagcgttt 8728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 288
Target Start/End: Complemental strand, 23346132 - 23345887
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||||||||||||||||||||||| || ||||||||  ||||| ||||||||  ||||  | ||||||||||| ||| | || |  |||||||    
T  23346132 ttagtgcagcaaaaccagttttctggatcactcattgaggatctgaatctgcatatttcaacctttttaagactcagtgggaccttgaaggcaaaccaag 23346033  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | | ||||||  | || |||||||| || ||||||||||||| |||| |  ||||||| |||||  |  |||| ||||| || |||||||||||| | ||    
T  23346032 aggtcgtaaggttacacctctttcctttctccttaagggata-agctagttcttggtttcattcagtgaaagttggttctatcacttcatgggaccaaat 23345934  T
Q  242 gaggcgagcattcctcgcccgattttccccccatctaaaacagctaa 288  Q
    ||| | |||||| || |||| ||| | ||||| ||||||||||||||    
T  23345933 gagacaagcatttcttgcccaattcttcccccttctaaaacagctaa 23345887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 25648867 - 25648794
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||| | ||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25648867 cctgcactactaagtttggtacaacaaaaccagttttctggatcacccactgaggatccaaatctgcatatttc 25648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 11234559 - 11234620
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgagga 82  Q
    ||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||    
T  11234559 atcaagcctgcactacttaatttggtgtagcaaaatcagttttctggatcacccactgagga 11234620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 25785431 - 25785358
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||| | ||| ||||||||||||||   ||||||||||||||||||||| |||||||| ||||||||    
T  25785431 cctgcactacttagtttggtgcagcaaaaccaagattctggatcacccactgaggacccaaatctgcatatttc 25785358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 25950422 - 25950585
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||| |||||||| || ||||  |||||||||||||||||||| ||||||||| ||||    ||  | ||||||||||| ||  |||| |  |||||||    
T  25950422 ttagtacagcaaaatcaatttttcggatcacccactgaggatccgaatctccatgtttcaaattttttaagactcagtggaactttaaaggcaaaccaag 25950521  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    | |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  25950522 aggccgtaaggctacacctctttcctttctctttgagggatagagctagtgcttggtttcattc 25950585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 5151659 - 5151586
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||| |  || || || ||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  5151659 cctgcactactaagcttggtacaacaaaaccagttttctagatcacccactgaggctccaaatctgcatatttc 5151586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 15694528 - 15694590
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||| | | | ||||| |||||||||||||||||||||||| |||| |||||||||    
T  15694528 cctgcactactaattctggtgcaacaaaaccagttttctggatcaccctctgaagatccaaat 15694590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 18845633 - 18845690
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    
T  18845633 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttc 18845690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 16770763 - 16771100
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16770763 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 16770862  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16770863 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 16770962  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16770963 cattacttcatgggacgatatgaggcgagcattcctcgccagatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 16771062  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16771063 aaagatggggagtctctctatgaggcgtgggagcgttt 16771100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 24800439 - 24800102
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24800439 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttcctcagactcagtg 24800340  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24800339 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 24800240  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24800239 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 24800140  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24800139 aaagatggggagtctctctatgaggcgtgggagcgttt 24800102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 27622709 - 27623046
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27622709 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 27622808  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27622809 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 27622908  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27622909 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 27623008  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||| ||||||||||||||||  ||||||||||    
T  27623009 aaagatgggtagtctctctatgaggcaagggagcgttt 27623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 27618682 - 27619019
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27618682 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttcctaagactcagtg 27618781  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27618782 gcaccataaaagagaaccaagaagccgtaagacttcatcactttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 27618881  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  27618882 cattacttcatgggacgatatgaggcgagcattcctcgcccgattttttcccccatctaaaaccgctaagcttagagacgaaatcacgcgtttcaatcaa 27618981  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||| ||||||||||||| ||||||||||||    
T  27618982 aatgatggggaatctctctatgaggtgtgggagcgttt 27619019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 112624 - 112960
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  112624 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 112723  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  112724 acaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaggggatagagctagcgcttggttccattccctagaagtcggttc 112823  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||||||||| |||||||||||||||||| |||||| |||| ||||||||| |||| ||||| |||||||| |||||||| ||||||||||||    
T  112824 catcacttcatgggacggtatgaggcgagcattccttgcccgattttttcccccatct-aaaccgctaaacttagagatcaaattactcgtttcaatcaa 112922  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||| |||||||||||||||||||||||||||||    
T  112923 aaagatggagagtctctctatgaggcgtgggagcgttt 112960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 24 - 357
Target Start/End: Original strand, 22289335 - 22289669
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| | ||||| |||||||||||||    
T  22289335 aagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaacctccatgtttctactttcctcagactcagtggca 22289434  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  22289435 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttggttccat 22289534  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| || || || ||||||||||| ||||| ||||||||||||    
T  22289535 cacttcatgggacgatatgaggcgagcattcctcgcccgattctttcctccatctaaaaccgccaaactaagagaccaaatcacgcggttcaatcaaaaa 22289634  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||| |||||||||||||| ||||||||||||||    
T  22289635 gatggagagtctctctatgatgcgtgggagcgttt 22289669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 342
Target Start/End: Original strand, 13974454 - 13974776
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||    
T  13974454 atcaagcctgcactactcaatttggtgcagcaaaatcagttctctggatcacccactaaggatccaaatctccatatttcttccttcttaagacttagtg 13974553  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  13974554 gcaccataaaagagaaccaagaagccgtaaaacttcaactctttcccttttccttaagggatagagctagcgcttggttcaattccatagaagttggttc 13974653  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| || ||||| || |||||||||||||| |||||  | ||||| ||||| ||||| ||||| |||    
T  13974654 catcacttcatgggatcaaatgaggcgagcattccttgctcgattctttcccccatctaaaaccgctaaattaagagatcaaatcacgcggttcaaccaa 13974753  T
Q  320 aaagatggggagtctctctatga 342  Q
    ||||||| ||||||||| |||||    
T  13974754 aaagatgaggagtctctatatga 13974776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 21 - 342
Target Start/End: Complemental strand, 18993412 - 18993089
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||  ||||||||||||| | ||||||||||    
T  18993412 atcaagcctgcactacttaatttggtgcagcaaaatcagttttctggatcacccacggaagatccaaatctctttatttcttccttcttaagactcagtg 18993313  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||    
T  18993312 gcactataaaagagaaccaagaatccgtaagacttcatctctttcccttttccttaagggatagagataacgcttggttccattccctagaagttggttc 18993213  T
Q  221 cattacttcatgggacgatatgaggcgagcattcc-tcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatca 318  Q
    ||| |||||||||||  | ||||||||||| |||| | |||||||| || || || |||||||| ||||| || ||||| ||||| ||||| ||||||||    
T  18993212 catcacttcatgggatcaaatgaggcgagcgttcctttgcccgattctttcctccctctaaaaccgctaaactaagagatcaaatcacgcggttcaatca 18993113  T
Q  319 aaaagatggggagtctctctatga 342  Q
    |||||||||||||||||| |||||    
T  18993112 aaaagatggggagtctctttatga 18993089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 25375069 - 25374875
Alignment:
Q  29 tgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccata 128  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||    
T  25375069 tgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatctcttctttcttaagactcagtggcaccata 25374970  T
Q  129 aaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  25374969 gaagagaaccaagaagccgtaagacttcatctttttcccttttccttaagggatagagctagcgcttggttccattctctagaagttggttccat 25374875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 20319 - 19982
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| || || ||||||||||| |||||||||||||||||  |||||||||||||||| ||||| ||  | ||  | |||||||| |    
T  20319 atcaagcctgcactacttaacttggtgcagcaaaatcagttttctggatcacctgctgaggatccaaatctgcatatctcaacgtttttaagactcagcg 20220  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    | ||| | |||| ||| ||||||| |||||| || || || ||||| ||  ||||||||||||||||||| ||||||||||||||  | ||||| |||||    
T  20219 gaaccttgaaagcgaatcaagaagtcgtaaggctgcacctttttcctttcaccttaagggatagagctggtgcttggttccattcattggaagttggttc 20120  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||| ||||||||| |||||||| || ||||| |||||||| ||||| || |||||||||||||| || |||||||||    
T  20119 catcacttcatgggatcaaatgaggcaagcattccttgcccgattctttcccccttctaaaactgctaaactaagagaccaaattacacggttcaatcaa 20020  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||| ||||| ||||||||||||||    
T  20019 aaagatggggaatctctttatgatgcgtgggagcgttt 19982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 173
Target Start/End: Original strand, 23013062 - 23013211
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  23013062 aagcctgcactagtcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttattccttcttaagactcagtggca 23013161  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttcc 173  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23013162 ctataaaagagaaccaagaagccgtgagacttcatctctttcccttttcc 23013211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 24176657 - 24176322
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||||||||| |||||||||||||| ||| |||||||||||||||| ||||| ||  | || || |||||||| || |    
T  24176657 aagcctgcactacttaacttggtgcagcaaaatcagttttctggatcgcccgctgaggatccaaatctgcatatctcaacttttctaagactcagcggaa 24176558  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    || | |||| ||| ||| ||||||||||  | || |||||||| || |||||||||||||||||| | | ||||||||||||  ||||||| ||||||||    
T  24176557 ccttgaaagcgaatcaataagccgtaaggatgcacctctttcctttctccttaagggatagagctagtgtttggttccattcattagaagttggttccat 24176458  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaat-caaaa 321  Q
     |||||||||||  | ||||||| | ||||||| |||||||| || ||||| | |||||| ||||| || ||||||||||| || || ||||||  ||||    
T  24176457 cacttcatgggataaaatgaggcaaacattccttgcccgattctttcccccctataaaactgctaaactaagagaccaaatcacacggttcaataaaaaa 24176358  T
Q  322 agatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||| ||||| ||||||||||||||    
T  24176357 agatggggagtctctttatgatgcgtgggagcgttt 24176322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 21343474 - 21343138
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| || || ||| ||||||| |||||||||||||||||  |||||||||||||||| ||||| ||  ||||  | ||||| || |    
T  21343474 atcaagcctgcactacttaacttggtgtagcaaaatcagttttctggatcacctgctgaggatccaaatctgcatatctcaacctttttaagactaagcg 21343375  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    | ||| | |||| ||| |||||||||||||| || || || ||||||||   |||||||||||||||| | ||||||||||||||  | ||||| |||||    
T  21343374 gaaccttgaaagcgaatcaagaagccgtaaggctgcacct-tttcccttcatcttaagggatagagctagtgcttggttccattcattggaagttggttc 21343276  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||| ||||||||| |||||||| || ||||| |||||||| ||||| || |||||||||||| | || |||||| ||    
T  21343275 catcacttcatgggatcaaatgaggcaagcattccttgcccgattctttcccccttctaaaactgctaaactaagagaccaaatttcacggttcaataaa 21343176  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||| ||||| | ||||||||||||    
T  21343175 aaagatggggaatctctttatgatgtgtgggagcgttt 21343138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 113 - 357
Target Start/End: Complemental strand, 25138123 - 25137879
Alignment:
Q  113 actcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaa 212  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||  | ||| ||||||||| ||||||    
T  25138123 actcagtggcactataaaagagaaccaagaagtcgtaagacttcatcttattcccttttccttaagggatagagctatccctttgttccattctctagaa 25138024  T
Q  213 gtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtt 311  Q
    || |||||||| ||||||| |||  | ||||||||||| |||||||| ||||| ||  |||| |||||||  ||||  || ||||||||||| || || |    
T  25138023 gttggttccatcacttcat-ggatcaaatgaggcgagcgttcctcgctcgattcttttccccctctaaaattgctacactaagagaccaaatcacacggt 25137925  T
Q  312 tcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  25137924 tcaatcaaaaagatggggagtctctttatgatgcgtgggagtgttt 25137879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 357
Target Start/End: Original strand, 23013208 - 23013363
Alignment:
Q  203 ttccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaa 301  Q
    |||||||||||| |||| ||| |||||||||||  | ||||| ||||||||||| |||||||| || ||||| |||||||| ||||| || ||||| |||    
T  23013208 ttccctagaagttggtttcatcacttcatgggatcaaatgagacgagcattccttgcccgattctttcccccctctaaaaccgctaaactaagagatcaa 23013307  T
Q  302 attacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    || |||||||||||||||||||||||||||||| | ||||| ||||||||| ||||    
T  23013308 atcacgcgtttcaatcaaaaagatggggagtctgtatatgatgcgtgggagtgttt 23013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 25142869 - 25142790
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttc 103  Q
    |||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25142869 aagcctgcacaactcaatttggtgcagcaaaatcagttatctggatcacccactgaggatccaaatctccatatctcttc 25142790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 24370418 - 24370254
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||| |||||| || || || ||||||||||| || ||||| |||||||||||||||||||  ||||| ||||||||  | ||| | ||||||||||| |    
T  24370418 aagcatgcacttcttaacttggtgcagcaaaatcaattttccggatcacccactgaggatcggaatcttcatatttcaactttcttaagactcagtggaa 24370319  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagct 188  Q
    |  | ||||| ||||||||||||||||| || || ||| |||| ||||| |||||||||||||||    
T  24370318 ctttgaaagaaaaccaagaagccgtaaggctgcacctcattcctttttctttaagggatagagct 24370254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 265
Target Start/End: Original strand, 29952669 - 29952912
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||| ||||||||||||||||| || ||||| |||| ||||||||||||||| ||||| |||||| | | |||  | ||||||||||    
T  29952669 atcaagcctgcactactaaatttagtgcagcaaaatcaattttccggattacccactgaggatccgaatcttcatattgc-tactttataagactcagtg 29952767  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    | ||  | ||||  |||||||| |||||||| || || || ||||| || || ||||| ||||||||| | |  |||||  ||||  |  ||   |||||    
T  29952768 gaactttgaaagcaaaccaagaggccgtaaggctgcacctatttcctttctctttaagagatagagctagtgtgtggttttattcattgcaaaatggttc 29952867  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt 265  Q
     ||||||||||||||| | ||||||| ||||||||| ||||||||    
T  29952868 tattacttcatgggaccaaatgaggcaagcattccttgcccgatt 29952912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 16167 - 16004
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||| || || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||  | || |  |||||||    
T  16167 ttagtgcagcagaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaag 16068  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    | |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  16067 aggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 16004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 25359409 - 25359571
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  25359409 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 25359508  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  25359509 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 25359571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 23635010 - 23635059
Alignment:
Q  51 caaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  23635010 caaaaccaattttctggatcacccactgaggatccaaatctgcatatttc 23635059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 25353130 - 25353349
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||||||||| || ||||  |||| |||||||||| |||| ||||| ||| ||||    ||  | ||||||||||| ||  | || |  |||||||    
T  25353130 ttagtgcagcaaaatcaatttttcggattacccactgagaatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaag 25353229  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | ||||||||| | || |||||||| ||||||| ||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | ||    
T  25353230 aggccgtaagaatgcacctctttcctttttcctaaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaat 25353329  T
Q  242 gaggcgagcattcctcgccc 261  Q
    ||||||||| ||||| ||||    
T  25353330 gaggcgagctttccttgccc 25353349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 25592290 - 25592197
Alignment:
Q  28 ctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtgg 121  Q
    ||||||| || ||||||||||| ||||| || ||||| |||||||||||||||||||| || || |||||| || | || || |||||||||||    
T  25592290 ctgcacttcttaatttagtgcaacaaaatcaattttccggatcacccactgaggatccgaaacttcatattgctacttttctaagactcagtgg 25592197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 13668952 - 13669289
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13668952 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatacaaatctccatatttcttccttccttagactcagtg 13669051  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13669052 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 13669151  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13669152 cattacttcatgggatgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 13669251  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13669252 aaagatggggagtctctctatgaggcgtgggagcgttt 13669289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 18598420 - 18598086
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18598420 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 18598321  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18598320 gcaccataaaagagaaccaataagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 18598221  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  18598220 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaa---acgcgtttcaatcaa 18598124  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18598123 aaagatggggagtctctctatgaggcgtgggagcgttt 18598086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 18275140 - 18275477
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18275140 atcaagcctgcactactcaatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttcctttcttagacttagtg 18275239  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18275240 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 18275339  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  18275340 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaaccgctaagcttagagaccaaatcacgcgtttcaatcaa 18275439  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18275440 aaagatggggagtctctctatgaggcgtgggagcgttt 18275477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 16470607 - 16470271
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16470607 atcaagcctgcactactcaatttggtgcagcaaaatcaattttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 16470508  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  16470507 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccataccctagaagttggttc 16470408  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  16470407 catcacttcat-ggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaaccgctaaacttagagatcaaattactcgtttcaatcaa 16470309  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16470308 aaagatggggagtctctctatgaggcgtgggagcgttt 16470271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 13653120 - 13653457
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13653120 atcaagcctgcactactcaatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 13653219  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13653220 gcactataaaagtgaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 13653319  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||| ||||||||||  ||||||| || ||||| |||||||| || || || ||||||||||||||||| ||||| |||    
T  13653320 catcacttcatgggatcaaatgaggtgagcattcctttcccgattctttcccccttctaaaaccgccaaactaagagaccaaattacgcggttcaaccaa 13653419  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  13653420 aaagatggggagtctctctatgatgcgtgggagcgttt 13653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 16527123 - 16527460
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16527123 atcaagcctgcactactcaatttggtgcaggaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 16527222  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16527223 gcactataaaagagaaccaagaagccgtaagacttcatctctttccctttttcttaagggatagagctagcgcttggttccattccctagaagtcggttc 16527322  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||||||||||||||  ||||||| || ||||| |||||||| || || || ||||||||||| ||||  ||||| |||    
T  16527323 catcacttcatgggatcaaatgaggcgagcattcctttcccgattctttcccccttctaaaaccgccaaactaagagaccaaatcacgcaattcaaccaa 16527422  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16527423 aaagatggggagtctctctatgatgcgtgggagcgttt 16527460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 11967187 - 11966850
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  11967187 atcaagcctgcattactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatgtttcttccttcttaagacttagtg 11967088  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||     
T  11967087 acaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttggtta 11966988  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | | |||||||| |||||  |||||||| || ||||||||||||||  |||| || ||||| ||||||||| | ||||| |||    
T  11966987 catcacttcatgggatcaaaagaggcgagaattccatgcccgattctttcccccatctaaaaccactaaactaagagatcaaattacgtggttcaaccaa 11966888  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  11966887 aaagatggggagtctctatatgatgcgtgggagcgttt 11966850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 21 - 358
Target Start/End: Complemental strand, 12388374 - 12388036
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  12388374 atcaagcctgcactactcaatttggtgcagcaaaatcagttctctggatcacccactgaggatccaaatctccatatttcttccttcttaagactcagtg 12388275  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  12388274 gcactataaaagagaaccaagaaactgaaagacttcatctctttcccttttccttaagggatagagctagcggttggttccattccctagaagtcggttc 12388175  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||||||||||||||  ||||||| || |||||||||||||| ||||| || ||||| ||| | ||||| ||||| |||    
T  12388174 catcacttcatgggatcaaatgaggcgagcattcctttcccgattctttcccccatctaaaaccgctaaactaagagatcaagtcacgcgattcaaccaa 12388075  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgtttt 358  Q
    ||||| ||||| ||||| ||||| | |||||| ||||||    
T  12388074 aaagaaggggaatctctatatgatgtgtgggaacgtttt 12388036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 12736771 - 12737108
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||| ||||||||||| | ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||    
T  12736771 atcaagcctacactactcaatctggtgcagcaaaatcaattttctggatcacccactgaggatccaaatctccatatttctgccttctcaagactcagtg 12736870  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  12736871 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattctctagaagttggttc 12736970  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||| |||||||||| |||||||| || |||||||||||||| ||||| || ||||| ||||| ||||  || ||| ||    
T  12736971 catcacttcatgggataaaatgaggtgagcattccttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaatcacgcagtttaataaa 12737070  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||| |||||||||| ||||| ||||||||||||||    
T  12737071 aaagatagggagtctctttatgatgcgtgggagcgttt 12737108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 265
Target Start/End: Complemental strand, 4464706 - 4464484
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||||||||| || ||||  |||||||||||||||||||| ||||| ||||||||  | ||  | ||||||||||| ||| | || |  |||||||    
T  4464706 ttagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatatttcaacttttttaagactcagtggaaccttgaaggcaaaccaag 4464607  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | |||||||| || || |||||||| ||||||||| ||||||||||| | ||||| || |||||  | ||||| ||||| ||||||||||||||| | ||    
T  4464606 a-gccgtaaggctgcacctctttcctttttccttaggggatagagctagtgcttgttttcattcattggaagttggttctattacttcatgggaccaaat 4464508  T
Q  242 gaggcgagcattcctcgcccgatt 265  Q
    ||||| ||||||||| ||||||||    
T  4464507 gaggcaagcattccttgcccgatt 4464484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 357
Target Start/End: Complemental strand, 8786223 - 8785907
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||| ||||| || ||||  ||||||| |||||||||||| ||| | ||||||||  | ||  | ||||||||||| ||| | || |  |||||||    
T  8786223 ttagtgcatcaaaatcaatttttcggatcactcactgaggatccgaattttcatatttcaacttttttaagactcagtggaaccttgaaggcaaaccaag 8786124  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  | ||||||||||| || ||||||||| |  | ||    
T  8786123 aggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattggaagtcggttctatcacttcatggcaaaaaat 8786024  T
Q  242 gaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctat 340  Q
    ||||| ||| || || |||||||| || ||||  |||||||   || |  | || |  ||||| || || |||| ||||||||||||||| ||||| ||     
T  8786023 gaggcaagcttttcttgcccgattctttccccattctaaaatttctcaattaaggggtcaaatcacacgattcactcaaaaagatggggaatctctttac 8785924  T
Q  341 gaggcgtgggagcgttt 357  Q
    || ||||||||||||||    
T  8785923 gatgcgtgggagcgttt 8785907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 544039 - 543876
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||| || || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||  | || |  |||||||    
T  544039 ttagtgcagcagaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaag 543940  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    | |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  543939 aggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 543876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 14228857 - 14228638
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||| || || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||  | || |  |||||||    
T  14228857 ttagtgcagcagaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaag 14228758  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | |||||||| || || |||||||| ||||||| ||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | ||    
T  14228757 aggccgtaaggctgcacctctttcctttttcctcaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaat 14228658  T
Q  242 gaggcgagcattcctcgccc 261  Q
    ||||||||| ||||| ||||    
T  14228657 gaggcgagctttccttgccc 14228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 16329788 - 16329569
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||| || || ||||  |||||||||||||||||||  ||| | ||||||||  | || || ||||||||||| ||  | || |  |||||||    
T  16329788 ttagtgcagcagaatcaatttttcggatcacccactgaggatctgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaag 16329689  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||  |   | | ||||| || |||||||||||| | ||    
T  16329688 aggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaat 16329589  T
Q  242 gaggcgagcattcctcgccc 261  Q
    ||||||||| ||||| ||||    
T  16329588 gaggcgagctttccttgccc 16329569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 256
Target Start/End: Original strand, 13735251 - 13735465
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    ||||||||||| || || ||||  |||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||| | || |  |||||||    
T  13735251 ttagtgcagcagaatcaatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaag 13735350  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    | | |||||| || || |||||||| ||||||||||||||||||||| | ||||| || |||||  |   | | ||||| || |||||||||||| | ||    
T  13735351 agggcgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttgatttcattcattgacaattggttctatcacttcatgggaccaaat 13735450  T
Q  242 gaggcgagcattcct 256  Q
    ||||||||| |||||    
T  13735451 gaggcgagccttcct 13735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 16153836 - 16153674
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    || || ||||||||||| ||  | || |  ||||||||    
T  16153836 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttctaagactcagtggaactttgaaggcaaaccaaga 16153737  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     ||||||||||| || |||||||| || || || |||||||||||| | |||||||| |||||    
T  16153736 ggccgtaagactgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 16153674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 23511352 - 23511514
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  23511352 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 23511451  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  23511452 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 23511514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 14546831 - 14546901
Alignment:
Q  135 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
    |||||||| |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  14546831 aaccaagaggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 14546901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 13597 - 13435
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || |||| |||||||||| |||||||||| ||||| ||| ||||    || || ||||||| ||| ||  | || |  ||||||||    
T  13597 tagtgcagcaaaatcaattttttggatcacccgctgaggatccgaatcttcatgtttcaatttttctaagactcattggaactttgaaggcaaaccaaga 13498  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  13497 ggccgtaaggctacacctctttcctttctctttgagggatagagctagtgcttggtttcattc 13435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 11927532 - 11927470
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||| | ||| ||||| |||||||||||||||||||||||| |||| || ||||||    
T  11927532 cctgcactactaagtttggtgcaacaaaaccagttttctggatcaccctctgaagacccaaat 11927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 15296347 - 15296293
Alignment:
Q  45 gtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatattt 99  Q
    ||||||||||| || ||||  |||||||||||||||||||||||| | |||||||    
T  15296347 gtgcagcaaaatcaatttttcggatcacccactgaggatccaaattttcatattt 15296293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 318; Significance: 1e-179; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 11879443 - 11879106
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11879443 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 11879344  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11879343 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 11879244  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11879243 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 11879144  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11879143 aaagatggggagtctctctatgaggcgtgggagcgttt 11879106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 12198572 - 12198235
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12198572 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 12198473  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12198472 gcaccattaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 12198373  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12198372 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacacgtttcaatcaa 12198273  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12198272 aaagatggggagtctctctatgaggcgtgggagcgttt 12198235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 10142174 - 10142511
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10142174 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttcctcagactcagtg 10142273  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10142274 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 10142373  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10142374 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 10142473  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10142474 aaagatggggaatctctctatgaggcgtgggagcgttt 10142511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 12191928 - 12191591
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12191928 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatctaaatctccatatttcttccttccttagactcagtg 12191829  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12191828 gcaccattaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 12191729  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12191728 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacacgtttcaatcaa 12191629  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12191628 aaagatggggagtctctctatgaggcgtgggagcgttt 12191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 13192495 - 13192158
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13192495 atcaagcctgcactactcaatttagtgcaacaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 13192396  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13192395 gcaccattaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 13192296  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13192295 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 13192196  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13192195 aaagatggggagtctctctatgaggcgtgggagggttt 13192158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 10165281 - 10164944
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10165281 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 10165182  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||    
T  10165181 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaaggggtagagctagcgcttggttccattccctagaagtcagttc 10165082  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10165081 cattacttcatgggacgatatgaggcgagcattcctcgcccgattctttcccccatccaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 10164982  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10164981 aaagatggggaatctctctatgaggcgtgggagcgttt 10164944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 15640190 - 15640527
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15640190 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 15640289  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15640290 gcaccataaaagagaaccaagaagccgtaagacttcacctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 15640389  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  15640390 cattacttcatgggacgatatgaggcgagcattcctctcccgatttttccccccatccaaaacagctaagcttatagaccaaattacgcgattcaatcaa 15640489  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15640490 aaagatggggagtctctctatgaggcgtgggagcgttt 15640527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 15634013 - 15633676
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15634013 atcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttcctaagactcagtg 15633914  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  15633913 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcgattc 15633814  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15633813 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaaccgctaagcttagagaccaaatcacgcgtttcaatcaa 15633714  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  15633713 aaagatggggaatctctctatgaggagtgggagcgttt 15633676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 13141279 - 13140942
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13141279 atcaagcctgcactactcaatttagtgcaacagaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagacttagtg 13141180  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  13141179 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcagttc 13141080  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||    
T  13141079 cattacttcatgggacgatatgaggcgagcattcctcgcctgatttttccccccatctaaaactgctaagctcagagaccaaatcacacgtttcaatcaa 13140980  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  13140979 aaagatggggaatctctctatgaggcgtgggagcgttt 13140942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 21 - 353
Target Start/End: Complemental strand, 13511463 - 13511130
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13511463 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttcctaagactcagtg 13511364  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13511363 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 13511264  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  13511263 catcacttcatgggacgatatgaggcgagcattccttgcccgattttttcccccatctaaaaccgctaagcttagagatcaaatcacgcgtttcaatcaa 13511164  T
Q  320 aaagatggggagtctctctatgaggcgtgggagc 353  Q
    |||| |||||||||||||||||||||||| ||||    
T  13511163 aaaggtggggagtctctctatgaggcgtgtgagc 13511130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 1009 - 672
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 910  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  909 gcacgataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 810  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||  ||| || ||||| |||||||| || || || ||| ||||||| ||||| ||||| |||    
T  809 catcacttcatgggatcaaatgaggcgagcattccttgccatattctttcccccctctaaaaccgccaaactaagaaaccaaatcacgcggttcaaccaa 710  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  709 aaagatagggagtctctctatgatgcgtgggagcgttt 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 13666141 - 13666479
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  13666141 atcaagcctgcactactccatttggtgcagcaaaatcagttttatggatcacccactgaggatccaaatctccatgtttcttccttcttaagacttagtg 13666240  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  13666241 gcaccataaaagagaaccaagaagccgtaagacttcatctttttcccttttccttaagggatagagctagcgcttggttccattccctagaagtaggttc 13666340  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatca 318  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||  |||||||||||||||||| ||||| || ||| | ||||||||||| ||||| ||    
T  13666341 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttccccccatctaaaaccgctaaactaagatatcaaattacgcggttcaacca 13666440  T
Q  319 aaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13666441 aaaagatggggagtctctatatgatgcgtgggagcgttt 13666479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 13201782 - 13201445
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13201782 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 13201683  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||| |||||    
T  13201682 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatacagctagcgcttggttccattccctataagttggttc 13201583  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
     ||  ||||||||||  | ||||||||||||||||| |||||||| || ||||| || |||||  | ||  | |||||||||||  |||| ||||| |||    
T  13201582 tatcgcttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccttccaaaaccaccaaattaagagaccaaatcgcgcggttcaaccaa 13201483  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  13201482 aaagatggggagtctctctatgatgcgtgggagcgttt 13201445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 145 - 357
Target Start/End: Original strand, 13604193 - 13604406
Alignment:
Q  145 ccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgag 244  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13604193 ccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccactccctagaagtcggttccattacttcatgggacgatatgag 13604292  T
Q  245 gcgagcattcctcgcccgatttt-ccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgag 343  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  13604293 gcgagcattcctcgcccgattttcccccccatctaaaaccgctaagcttagagaccaaatcacgcgtttcaatcaaaaagatggggaatctctctatgag 13604392  T
Q  344 gcgtgggagcgttt 357  Q
    ||||||||||||||    
T  13604393 gcgtgggagcgttt 13604406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 28 - 357
Target Start/End: Complemental strand, 14070653 - 14070323
Alignment:
Q  28 ctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccat 127  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||| ||| | |||||||||||||| ||    
T  14070653 ctgcactactcaatttggtgcagcaaaatcagttttttggatcatccactgaggatccaaatctccatatctcttctttcttaagactcagtggcactat 14070554  T
Q  128 aaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattact 227  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||| |||    
T  14070553 aaaagagaaccaagaagccgtaagacttcatatttttcccttttccttaagggatagagctagcgcttggttccactctctagaagttggttccatcact 14070454  T
Q  228 tcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatg 326  Q
    ||||||||  | ||||||| ||||||  | |||||||| || ||||| |||||||| ||||| ||  |||||||||| |   | || |||||||||||      
T  14070453 tcatgggatcaaatgaggcaagcatttgttgcccgattctttcccccctctaaaaccgctaaactatgagaccaaatcataaggtttaatcaaaaagacc 14070354  T
Q  327 gggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||| ||| | ||||||||||||||    
T  14070353 gggagtctctttataatgcgtgggagcgttt 14070323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 12159794 - 12159573
Alignment:
Q  137 ccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggac 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||     
T  12159794 ccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatgggat 12159695  T
Q  237 gatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctc 335  Q
     | ||||||||||| |||||  ||||||| || ||||| |||||||| || || || ||||||||||| || || || || |||||||||| ||||||||    
T  12159694 caaatgaggcgagcgttcctttcccgattctttcccccctctaaaaccgccaaactaagagaccaaatcacacgatttaaccaaaaagatgaggagtctc 12159595  T
Q  336 tctatgaggcgtgggagcgttt 357  Q
    ||||||| ||||||||||||||    
T  12159594 tctatgatgcgtgggagcgttt 12159573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 14455971 - 14455768
Alignment:
Q  155 tcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattc 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||  | || ||||||||||||    
T  14455971 tcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaaatcggttccatcacttcatgggatcaaataaggcgagcattc 14455872  T
Q  255 ctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagc 353  Q
    || |||||||| || |||||||||||||| ||||| || ||||| ||||| ||||| |||||  ||||||||||||||||||| ||||| ||||||||||    
T  14455871 cttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaatcacgcggttcaactaaaaagatggggagtctctatatgatgcgtgggagc 14455772  T
Q  354 gttt 357  Q
    ||||    
T  14455771 gttt 14455768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 353
Target Start/End: Original strand, 17216010 - 17216338
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||| ||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||    || || ||||||| ||| |    
T  17216010 aagcctacactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctgcatatctcaatgtttctaagactcattggaa 17216109  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    || | |||| ||| |||||||| ||||  || || |||||||  || |||||||||||||||||| | |||||||| |||||  | ||||| ||||||||    
T  17216110 ccttgaaagcgaatcaagaagctgtaatgctgcacctctttcttttctccttaagggatagagctagtgcttggtt-cattcattggaagttggttccat 17216208  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
      ||||||||||  | ||||||| ||||||||| |||||||| || | ||| || ||||| ||||| || |||||||||||||| || |||||| |||||    
T  17216209 cgcttcatgggatcaaatgaggcaagcattccttgcccgattatttcgcccttccaaaactgctaaactaagagaccaaattacacggttcaataaaaaa 17216308  T
Q  323 gatggggagtctctctatgaggcgtgggagc 353  Q
    ||| |||| ||||| ||||| ||||||||||    
T  17216309 gat-gggaatctctttatgatgcgtgggagc 17216338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 210 - 357
Target Start/End: Original strand, 12380327 - 12380475
Alignment:
Q  210 gaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgc 308  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||| |||||||| || |||||||||||||| || || || ||||||||||| ||||    
T  12380327 gaagtcggttccatcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccatctaaaaccgccaaactaagagaccaaatcacgc 12380426  T
Q  309 gtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    | ||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  12380427 ggttcaaccaaaaagatggggaatctctctatgatgcgtgggagcgttt 12380475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 15233260 - 15233174
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttc 107  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15233260 atcaagcctgcactcctcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatgtttcttccttc 15233174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 14456058 - 14455972
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttc 107  Q
    ||||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14456058 atcaagcctgcactactcaatttggtgcaacaaattcagttctctggatcacccactgaggatccaaatctccatatttcttccttc 14455972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 20151777 - 20151939
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || |||| ||||||||||||||||||||| ||| | ||||||||  | || || ||||||||||| ||| | || |  ||||||||    
T  20151777 tagtgcagcaaaatcaattttttggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaaga 20151876  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| || |||||||||||||||||| | |||||||| |||||    
T  20151877 ggccgtaaggctgcacctctttcctttctccttaagggatagagctagtgcttggtttcattc 20151939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 22168868 - 22168706
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  22168868 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaaatttttaaaactcagtggaactttgaaggcaaaccaaga 22168769  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  22168768 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 22168706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 205
Target Start/End: Complemental strand, 10607091 - 10606929
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  10607091 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 10606992  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| |||||||||||||||||| || | |||||||| |||||    
T  10606991 ggccgtaaggctgcacctctttcctttttccttaagggatagaactagtgcttggtttcattc 10606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 15950398 - 15950328
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatat 97  Q
    ||||||||||| | ||| || || |||||||||||||||||||||||| |||| || |||||| |||||||    
T  15950398 cctgcactactaagtttggtacaacaaaaccagttttctggatcaccctctgaagacccaaatttccatat 15950328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 20557375 - 20557537
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | ||||||||||| ||  | || |  ||||||||    
T  20557375 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaaga 20557474  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||    
T  20557475 ggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattc 20557537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 55501260 - 55501306
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacc 73  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  55501260 cctgcactactaagtttagtgcaacaaaaccagttttctggatcacc 55501306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 13052589 - 13052624
Alignment:
Q  54 aaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13052589 aaccagttttctggatcacccaccgaggatccaaat 13052624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 3249135 - 3249078
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    
T  3249135 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttc 3249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 26174074 - 26174017
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttc 100  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    
T  26174074 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttc 26174017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 21 - 340
Target Start/End: Complemental strand, 7129 - 6809
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  7129 atcaagcctggactactcaatttagtgcagcagaaccagttttctggatcacccactgatgatccaaatcttcttatttcttccttccttagactcagtg 7030  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||    
T  7029 gcaccataaaagagaaccaagaagccttaagacttcatctctttcccttttccttaagggatagagcttgttcttggttccatttcctagaagtcggttc 6930  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6929 cattacttcatgggacgatatgaggcgagcattcctcgcccgatttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 6830  T
Q  320 aaagatggggagtctctctat 340  Q
    |||||||||||||||||||||    
T  6829 aaagatggggagtctctctat 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 25616 - 25953
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25616 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 25715  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25716 gcaccatagaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 25815  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  ||||| || ||||| ||||| ||||| |||||||||    
T  25816 catcacttcatgggacgatatgaggcgagcattccttgcccgatttttccccccatctaaaatcgctaaactaagagatcaaatcacgcggttcaatcaa 25915  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  25916 aaagatggggagtctctctatgatgcgtgagagcgttt 25953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 230; Significance: 1e-127; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 16389 - 16052
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  16389 atcaagcctgcactactcaatttggtgcagcaaaatcagttctctggatcacccactgaggatccaaatatccatatttcttccttcttaagacttagtg 16290  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  16289 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttggttc 16190  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    |||  ||||||||||  | ||||||||||||||||| |||||||| || |||||||||||||| ||||| || ||||| ||||||||||| ||||| |||    
T  16189 catcgcttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaattacgcggttcaaccaa 16090  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||| | ||||| ||||||||||||||    
T  16089 aaagatggggagtctttatatgatgcgtgggagcgttt 16052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 55623 - 55286
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||| ||    
T  55623 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttctaccttcaaaagactcaatg 55524  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||    
T  55523 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctaccgcttggttctattccctagaagttggttc 55424  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||  ||||| |||||  | |||||||||||||| || |||||||| || |||||||||||||| ||||| || |||||  |||| ||||| || |||  |    
T  55423 caccacttcctgggatcaaatgaggcgagcatttcttgcccgattctttcccccatctaaaaccgctaaactaagagataaaatcacgcggtttaatata 55324  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||| ||||||||||||| ||||  ||||||||||||||    
T  55323 aaatatggggagtctctatatgttgcgtgggagcgttt 55286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 50 - 331
Target Start/End: Complemental strand, 2560 - 2278
Alignment:
Q  50 gcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgta 149  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2560 gcaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactttgtggcaccataaaagagaaccaagaagccgta 2461  T
Q  150 agacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgag 249  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2460 agacttcatctctttcccttttccttaagggatagagctagctcttggttccattccctagaagtcggttccatcacttcatgggacgatatgaggcgag 2361  T
Q  250 cattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggag 331  Q
    ||||||| |||||| |||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  2360 cattccttgcccgattttttcccccatctaaaaccgctaaacttagagatcaaatcacgcgtttcaatcaaaaagatggggag 2278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 349
Target Start/End: Original strand, 391 - 719
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  391 atcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 490  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  491 gcaccattaaagagaaccaagaagcggtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 590  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||||||||||| || |||||||| || |||||||||||||| ||||| || ||||| ||||| || || ||||| |||    
T  591 catcacttcatgggatca-atgaggcgagcatttcttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaatcacacggttcaaccaa 689  T
Q  320 aaagatggggagtctctctatgaggcgtgg 349  Q
    ||||||||||||||||| ||||| ||||||    
T  690 aaagatggggagtctctatatgatgcgtgg 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 349
Target Start/End: Original strand, 6557 - 6885
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  6557 atcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccatatttcttccttcttaagacttagtg 6656  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6657 gcaccattaaagagaaccaagaagcggtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 6756  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | |||||||||||||| || |||||||| || |||||||||||||| ||||| || ||||| ||||| || || ||||| |||    
T  6757 catcacttcatgggatca-atgaggcgagcatttcttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaatcacacggttcaaccaa 6855  T
Q  320 aaagatggggagtctctctatgaggcgtgg 349  Q
    ||||||||||||||||| ||||| ||||||    
T  6856 aaagatggggagtctctatatgatgcgtgg 6885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 1429 - 1092
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| || |||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  1429 atcaagcctgcactactcaattttgttcagctaaatcagttttctggatcacctacttaggatccaaatctccatatttcttccttccttagactcagtg 1330  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  1329 gcactataaaagagaaccaagaagccgtaaggcttcatctctttcccttttccttaaggggtagagctagcgcttggttccattccctagaagtcggttc 1230  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||||| |  | |||||||| |||||||| |||||||| || ||||| |||||||| || || || ||||||||||| ||||| |||||||||    
T  1229 catcacttcatggaatcaaatgaggcgtgcattccttgcccgattctttcccccctctaaaaccgccaaactaagagaccaaatcacgcggttcaatcaa 1130  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    | ||||||||||||||||||||| ||||||||||||||    
T  1129 atagatggggagtctctctatgatgcgtgggagcgttt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 222; Significance: 1e-122; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 187330 - 187667
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||  ||||    
T  187330 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatgtttcttccttcttaagacctagtg 187429  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  187430 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttagttccattccctagaagtcggttc 187529  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||| ||| || ||||| |||||||| || || || ||||||||||| ||||| ||||| |||    
T  187530 catcacttcatgggatcaaatgaggcgagcattccttgccctattcttacccccctctaaaaccgccaaactaagagaccaaatcacgcggttcaaccaa 187629  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  187630 aaagatggggagtctctcgatgatgcgtgggagcgttt 187667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 15409 - 15299
Alignment:
Q  135 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatggg 234  Q
    |||||||| |||||||| || || |||||||| || || || |||||||||||| | |||||||| |||||  |  || | |||||||| ||||||||||    
T  15409 aaccaagaggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttccatcacttcatggg 15310  T
Q  235 acgatatgagg 245  Q
    || | ||||||    
T  15309 accaaatgagg 15299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 368464 - 368127
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||    
T  368464 atcaagcctgcactactcaatttggtgtagcaaaatcagttttctggatcacccactgaggatccaaatctccatgtttcttccttcttaagactcaatg 368365  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  368364 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 368265  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||| ||| || ||||| |||||||| || || || ||||||||||| | ||| ||||| |||    
T  368264 catcacttcatgggatcaaatgaggcgagcattccttgccctattctttcccccctctaaaaccgccaaactaagagaccaaatcatgcggttcaaccaa 368165  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  368164 aaagatggggagtatctctatgatgcgtgggagcgttt 368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 221; Significance: 1e-121; HSPs: 3)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 21 - 342
Target Start/End: Original strand, 28355 - 28678
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||| ||||    
T  28355 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccattgaggatccaaatctccatatctcttccttcataagacttagtg 28454  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28455 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttggttc 28554  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatca 318  Q
    ||| |||||||||||  | ||||||||| ||||||| |||||||  |||||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||    
T  28555 catcacttcatgggatcaaatgaggcgaacattccttgcccgattctttccccccatctaaaaccgctaaactaagagatcaaattacgcggttcaacca 28654  T
Q  319 aaaagatggggagtctctctatga 342  Q
    |||||||||||| ||||| |||||    
T  28655 aaaagatggggaatctctatatga 28678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 21 - 342
Target Start/End: Original strand, 24158 - 24481
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||| ||||    
T  24158 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccattgaggatccaaatctccatatctcttccttcataagacttagtg 24257  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  24258 gcaccatataagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagttggttc 24357  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgat--tttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatca 318  Q
    ||| |||||||||||  | ||||||||| ||||||| |||||||  |||||||||||||||||| ||||| || ||||| ||||||||||| ||||| ||    
T  24358 catcacttcatgggatcaaatgaggcgaacattccttgcccgattctttccccccatctaaaaccgctaaactaagagatcaaattacgcggttcaacca 24457  T
Q  319 aaaagatggggagtctctctatga 342  Q
    |||||||||||| ||||| |||||    
T  24458 aaaagatggggaatctctatatga 24481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 48173 - 48510
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||| |||||||||||||||| ||||||||||| ||||| ||||||| ||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  48173 atcaagtctgcactactcaatttggtgcagcaaaatcagttctctggattaccgactgaggatccaaatcttcatatttcttccttcttaagactcagtg 48272  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48273 gcactataaaagagaaccaagaagccgtaagacttcatctctttccattttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 48372  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| || |||||||||||||| ||||| || ||||| ||||| | ||| ||||| |||    
T  48373 catcacttcatgggatcaaatgaggcgagcattccttgcccgattctttcccccatctaaaaccgctaaactaagagatcaaatcaagcggttcaaccaa 48472  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||| ||||| ||||| ||||| || |||||||||||    
T  48473 aaagagggggaatctctatatgatgcttgggagcgttt 48510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 357
Target Start/End: Complemental strand, 1747 - 1410
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1747 atcaagcctgcactactcaatttggtgcagctaaatcagttttctggatcaccaactgaggatccaaatctccatatttcttccttccttagactcagtg 1648  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  1647 gcactataaaacagaaccaagaagccataagacttcatctctttcccttttccttaagggatagagctagggcttggttccattccctagaagtcggttc 1548  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | ||||||||||||||||| |||||||| |||||||| |||||||| || || || | ||||||||| | ||  ||||| |||    
T  1547 catcacttcatgggatcagatgaggcgagcattccttgcccgattcttccccccctctaaaaccgccaaactaatagaccaaatcatgcagttcaaccaa 1448  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||| ||||||| ||||||||||| ||||||||||||||    
T  1447 aaaaatggggattctctctatgatgcgtgggagcgttt 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 128 - 357
Target Start/End: Original strand, 34696 - 34926
Alignment:
Q  128 aaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattact 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34696 aaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccattact 34795  T
Q  228 tcatgggacgatatgaggcgagcattcctcgcccga-ttttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatg 326  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  34796 tcatgggacgatatgaggcgagcattcctcgcccgattttttcccccatccaaaaccgctaagcttagagaccaaatcacgcgtttcaatcaaaaagatg 34895  T
Q  327 gggagtctctctatgaggcgtgggagcgttt 357  Q
    |||||||||||||||||||||||||||||||    
T  34896 gggagtctctctatgaggcgtgggagcgttt 34926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1589 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold1589
Description:

Target: scaffold1589; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 34 - 357
Target Start/End: Complemental strand, 1603 - 1279
Alignment:
Q  34 tactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaaga 133  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||| ||||||||||| |||||    
T  1603 tactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatttccatatctcttccttcttaagacttagtggcaccatcaaaga 1504  T
Q  134 gaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgg 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||||| |||||||||    
T  1503 gaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagttcttggttccattccctagaagttggttccatcacttcatgg 1404  T
Q  234 gacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatggggagt 332  Q
    ||  | ||||||||||||||||| |||||||| || |||||||| ||||| || || || ||||| ||||||||||| ||||| |||||||||||||| |    
T  1403 gatcaaatgaggcgagcattccttgcccgattctttcccccatccaaaaccgcaaaactaagagatcaaattacgcggttcaaccaaaaagatggggaat 1304  T
Q  333 ctctctatgaggcgtgggagcgttt 357  Q
    |||| ||||| ||||||||||||||    
T  1303 ctctatatgatgcgtgggagcgttt 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 16242 - 16570
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16242 atcaagcttgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatatccatatttcttccttccttagactcagtg 16341  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||| |||||||||        |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16342 gcactataaaagtgaaccaaga--------gacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 16433  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| ||||||| |||  | ||||||||||||||||| ||| |||| || ||||| |||||||| || || || |||||||| || ||||| ||||| |||    
T  16434 catcacttcat-ggatcaaatgaggcgagcattccttgcctgattctttcccccttctaaaaccgccaaactaagagaccagatcacgcggttcaaccaa 16532  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16533 aaagatggggagtctctctatgatgcgtgggagcgttt 16570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 21 - 309
Target Start/End: Complemental strand, 6786 - 6498
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||||||  |||||| ||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  6786 atcaagcctatactacttaatttggtgcagcaaaatcagttttctggatcacccactaagcatccaaatctccatattttttccttccttagactcagtg 6687  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6686 gcactataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttc 6587  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcg 309  Q
    ||| |||||||||||  | ||||||| ||||||||| |||||||| || ||| | |||||||| || ||||| ||||||||||| |||||    
T  6586 catcacttcatgggatcaaatgaggcaagcattccttgcccgattctttccctcctctaaaaccgc-aagctaagagaccaaatcacgcg 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 21 - 357
Target Start/End: Original strand, 24954 - 25290
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  24954 atcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctcca-atttcttccttcttaagactcagtg 25052  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttc 220  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| |||||||| ||| |||| |||||    
T  25053 gcactataaaagagaaccaagaagccgtaagacttcatccctttcccttttccttaagggatagagctagctcttgattccattctctaaaagttggttc 25152  T
Q  221 cattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaa 319  Q
    ||| |||||||||||  | || |||||||||||||| |||||||| || ||||| |||||||| |||||  | |||||  |||| || || || ||||||    
T  25153 catcacttcatgggatcaaataaggcgagcattccttgcccgattctttcccccctctaaaaccgctaaaataagagataaaatcacacggtttaatcaa 25252  T
Q  320 aaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    ||||||| ||||||||| ||||| ||||||||| ||||    
T  25253 aaagatgtggagtctctttatgatgcgtgggagtgttt 25290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 75082 - 75242
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtg 120  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  75082 atcaagtctgcactactcaatttggtgcagcaaaaccagttctctggatcacccactgaggatccaaatctccatatttcttccttcataagactaagtg 75181  T
Q  121 gcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaaggga 181  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  75182 gcacaataaaagagaaccaagaagccgtaagacttcatctctttccattttccttaaggga 75242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 2789 - 2944
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactga-ggatccaaatctccatatttcttccttccttagactcagt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2789 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgatggatccaaatctccatatttcttccttccttagactcagt 2888  T
Q  120 ggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttcctt 175  Q
    |||||||||||||||||||||||  || ||||| |||||||  ||||| |||||||    
T  2889 ggcaccataaaagagaaccaagacaccataagatttcatcttcttcccctttcctt 2944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 665 - 331
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||||||||| ||| |||||||||| |||  ||||||||||||||| ||||| ||  | ||| | |||||||| || |    
T  665 aagcctgcactacttaacttggtgcagcaaaatcagatttctggatcgcccgttgaggatccaaatctgcatatctcaactttcttaagactcagcggaa 566  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    |  | |||| ||| |||||||||||||| || || |||||||| || |||||||||||||||||| | |||| | |||||||  | ||||| ||||||||    
T  565 ctttgaaagcgaatcaagaagccgtaaggctgcaactctttcctttctccttaagggatagagctagtgcttaggtccattcattggaagttggttccat 466  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     |||||||||||  | ||||||| ||||||||| |||||||| || ||||| |||||||| |||||  | ||||||||||| ||  ||||||||||||||    
T  465 cacttcatgggatcaaatgaggcaagcattccttgcccgattctttcccccctctaaaactgctaaattaagagaccaaatcacatgtttcaatcaaaaa 366  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
     ||||||||||||| ||||| ||||| ||||||||    
T  365 tatggggagtctctttatgatgcgtgagagcgttt 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 2042 - 1708
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||||||||| ||| |||||||||| |||  ||||||||||||||| ||||| ||  | ||| | |||||||| || |    
T  2042 aagcctgcactacttaacttggtgcagcaaaatcagatttctggatcgcccgttgaggatccaaatctgcatatctcaactttcttaagactcagcggaa 1943  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    |  | |||| ||| |||||||||||||| || || |||||||| || |||||||||||||||||| | |||| | |||||||  | ||||| ||||||||    
T  1942 ctttgaaagcgaatcaagaagccgtaaggctgcaactctttcctttctccttaagggatagagctagtgcttaggtccattcattggaagttggttccat 1843  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaa 322  Q
     |||||||||||  | ||||||| ||||||||| |||||||| || ||||| |||||||| |||||  | ||||||||||| ||  ||||||||||||||    
T  1842 cacttcatgggatcaaatgaggcaagcattccttgcccgattctttcccccctctaaaactgctaaattaagagaccaaatcacatgtttcaatcaaaaa 1743  T
Q  323 gatggggagtctctctatgaggcgtgggagcgttt 357  Q
     ||||||||||||| ||||| ||||| ||||||||    
T  1742 tatggggagtctctttatgatgcgtgagagcgttt 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 305
Target Start/End: Original strand, 521868 - 522150
Alignment:
Q  24 aagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggca 123  Q
    |||||||||||||| || || ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||  | ||| | ||||||||||| |    
T  521868 aagcctgcactacttaacttggtgcagcaaaaccagttttctagatcactcactgaggatcccaatctgcatatttcaactttcttcagactcagtggaa 521967  T
Q  124 ccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccat 223  Q
    ||   || | ||||||||| || ||||| || ||||||||||| ||||||||||||||||| ||| | ||||||||||||||  | || || ||||||||    
T  521968 cctagaaggcgaaccaagaggctgtaaggctacatctctttcctttttccttaagggatagcgctagtgcttggttccattcattggaggttggttccat 522067  T
Q  224 tacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaatta 305  Q
     |||||||||||  | ||||||| ||||||||| || ||||| || ||||| | |||||| ||||| || || ||||||||||    
T  522068 cacttcatgggatcaaatgaggcaagcattccttgcacgattctttcccccttataaaactgctaaactgagggaccaaatta 522150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 193 - 357
Target Start/End: Original strand, 116240 - 116405
Alignment:
Q  193 cttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagct 291  Q
    ||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||||| |||| ||| || ||||| |||||||| || || ||    
T  116240 cttggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggcgagcattccttgcccaattctttcccccctctaaaactgccaaact 116339  T
Q  292 tagagaccaaattacgcgtttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
     ||||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  116340 aagagaccaaatcacgcggttcaaccaaaaagatagggagtctctctatgatgcgtgggagcgttt 116405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 351
Target Start/End: Original strand, 22708 - 23032
Alignment:
Q  28 ctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccat 127  Q
    |||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||  | ||| | ||||| ||||| ||  |    
T  22708 ctgcactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatatgcatatctcaactttcttaagacttagtggaacatt 22807  T
Q  128 aaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattact 227  Q
     || | ||||||| | | |||||| || || |||||||| ||||||| ||||||||||| | | ||||||||||||||  | ||||| |||||||| |||    
T  22808 caaggcgaaccaaaaggtcgtaaggctgcacctctttcctttttcctaaagggatagagatagtgcttggttccattcattggaagttggttccatcact 22907  T
Q  228 tcatgggacgatatgaggcgagcattcctcgcccgatt-ttccccccatctaaaacagctaagcttagagaccaaattacgcgtttcaatcaaaaagatg 326  Q
    ||||||||  | ||||||| |||||| ||  ||||||| || ||||| ||||| || |||||  | || |||||||| || || |||| ||| |||||||    
T  22908 tcatgggatcaaatgaggcaagcatttcttacccgattatttcccccttctaagactgctaaattgagggaccaaatcacacggttcactcagaaagatg 23007  T
Q  327 gggagtctctctatgaggcgtggga 351  Q
    |  | ||||| ||||| ||||||||    
T  23008 gaaaatctctttatgatgcgtggga 23032  T

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Target: scaffold0909 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0909
Description:

Target: scaffold0909; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 750 - 824
Alignment:
Q  21 atcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 95  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  750 atcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccat 824  T

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Target: scaffold0064 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 39344 - 39279
Alignment:
Q  37 tcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttctt 102  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39344 tcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccatatttctt 39279  T

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Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 265
Target Start/End: Original strand, 169308 - 169528
Alignment:
Q  45 gtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaag 144  Q
    ||||||||||| || ||||| ||||||||||||||||||||  |||| ||||| ||| | || || || ||| |||| ||| | ||||  |||||||| |    
T  169308 gtgcagcaaaatcaattttccggatcacccactgaggatccgcatcttcatatctctacttttctaagtctcggtggaaccttgaaagcaaaccaagagg 169407  T
Q  145 ccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgag 244  Q
    || |||| || || |||||||| ||  | ||||||||||||||| | || ||||| |||||  || | || ||||| || |||||||||||| | |||||    
T  169408 ccataaggctgcacctctttcctttcactttaagggatagagctagtgcatggtttcattcattataggttggttctatcacttcatgggaccaaatgag 169507  T
Q  245 gcgagcattcctcgcccgatt 265  Q
    || ||||||||| ||||||||    
T  169508 gcaagcattccttgcccgatt 169528  T

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Target: scaffold0175 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 265
Target Start/End: Complemental strand, 11512 - 11313
Alignment:
Q  66 ggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttc 165  Q
    |||||||||||||||||||| ||| | ||||||||  | || || | || |||||| ||| | || |  | |||||| |||||||| || || |||||||    
T  11512 ggatcacccactgaggatccgaattttcatatttcaacttttctaaaacgcagtggaaccttgaaggcaagccaagaggccgtaaggctgcacctctttc 11413  T
Q  166 ccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatatgaggcgagcattcctcgcccgatt 265  Q
    | ||||||||||||||||||||| | ||||||||  ||||  | ||||||||||| || ||||||||| || | ||||||| ||| || || ||||||||    
T  11412 ctttttccttaagggatagagctagtgcttggttttattcattggaagtcggttctatcacttcatggcaccaaatgaggcaagcttttcttgcccgatt 11313  T

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Target: scaffold0221 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 265
Target Start/End: Complemental strand, 866 - 647
Alignment:
Q  42 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaag 141  Q
    |||||||| ||||| || ||||  |||||||| ||||||||||| ||| | ||||||||| | ||  | ||||||||||| ||| | || |  |||||||    
T  866 ttagtgcaacaaaatcaatttttcggatcaccgactgaggatccgaattttcatatttctacttttttaagactcagtggaaccttgaatgcaaaccaag 767  T
Q  142 aagccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattccctagaagtcggttccattacttcatgggacgatat 241  Q
    |||| ||||| || ||     |||| ||||||||||||||||||||| | |||||||| |||||  | ||||| ||||| || ||||||||| || | ||    
T  766 aagctgtaaggctgcac----ttcctttttccttaagggatagagctagtgcttggtttcattcattggaagttggttctatcacttcatggcaccaaat 671  T
Q  242 gaggcgagcattcctcgcccgatt 265  Q
    ||||| ||| ||||| ||||||||    
T  670 gaggcaagctttccttgcccgatt 647  T

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Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 119031 - 119193
Alignment:
Q  43 tagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaaga 142  Q
    ||||||||||||| || ||||  |||||||||||||||||||| ||||| ||| ||||    ||  | | ||||||||| ||  | || |  ||||||||    
T  119031 tagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaaga 119130  T
Q  143 agccgtaagacttcatctctttcccttttccttaagggatagagctggcgcttggttccattc 205  Q
     |||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||    
T  119131 ggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattc 119193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 2576 - 2515
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaa 88  Q
    ||||||||||| |  || || || ||||||||||||||||||||||||||||||||||||||    
T  2576 cctgcactactaagcttggttcaacaaaaccagttttctggatcacccactgaggatccaaa 2515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1475 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1475
Description:

Target: scaffold1475; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 751 - 813
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||| | ||| ||||| |||||||||||||||||||||||| |||| || ||||||    
T  751 cctgcactactaagtttggtgcaacaaaaccagttttctggatcaccctctgaagacccaaat 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2060 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2060
Description:

Target: scaffold2060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 661 - 599
Alignment:
Q  27 cctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaat 89  Q
    ||||||||||| | | | ||||| |||||||||||||||||||||||| |||| ||| |||||    
T  661 cctgcactactaagtctggtgcaacaaaaccagttttctggatcaccctctgaagattcaaat 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 2436 - 2390
Alignment:
Q  311 ttcaatcaaaaagatggggagtctctctatgaggcgtgggagcgttt 357  Q
    |||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  2436 ttcactcaaaaagatggggaatctctttatgatgcgtgggagcgttt 2390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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