View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288_low_43 (Length: 273)
Name: NF9288_low_43
Description: NF9288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288_low_43 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 263
Target Start/End: Original strand, 50047587 - 50047831
Alignment:
| Q |
19 |
aaacagcatataaaaaatattgaaaaccttctccgttgtattttctgcatgtaaatctccatagccaacagtggtaagggttacaatagaccaatacatg |
118 |
Q |
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| T |
50047587 |
aaacagcatataaaaaatattgaaaaccttctccgttgtattttctgcatgtaaatctccatagccaacagtggtaagggttacaatagaccaatacatg |
50047686 |
T |
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| Q |
119 |
gagtaagtgtaacccgatccgacactcctatgcttaaaatcctctacctgcttcccaatccacgtgtttccgggtgatttgtgatggaaagccaaccaaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50047687 |
gagtaagtgtaacccgatccgacactcctatgcttaaaatcctctacctgcttcccaatccacgtgtttccgggtgatttgtgatggaaagccaaccaaa |
50047786 |
T |
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| Q |
219 |
aatacacgcagcctgtgaagtgcactgcaaatagcgtaacctatg |
263 |
Q |
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| T |
50047787 |
aatacacgcagcctgtgaagtgcactgcaaatagcgtaacctatg |
50047831 |
T |
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