View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288_low_59 (Length: 250)
Name: NF9288_low_59
Description: NF9288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 36601637 - 36601416
Alignment:
| Q |
1 |
ctagtcttcaatgagcccagcaaattcaaaacagctgtcagtgttagtgaagccatgggtggttgtttcatgttcaccgaaaatgagtggttattctaat |
100 |
Q |
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| T |
36601637 |
ctagtcttcaatgagcccagcaaattcaaaacagctgtcagtgttagtgaagccatgggtggttgtttcatgttcaccgaaaatgagtggttattctaat |
36601538 |
T |
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| Q |
101 |
cttaaatgtgtgacaataaagtagtattcacttgtgagctatggtgttttaggattgccatataatttgaattaagggttaatatgcctttagcggaatc |
200 |
Q |
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| T |
36601537 |
ctttaatgtgtgacaataaagtagtagtcact--------------ttttaggattgccatataatttgaattaagggttaatatgcttttaggggaatc |
36601452 |
T |
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| Q |
201 |
ttattctgctgttaataatgaattttacctatagtc |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
36601451 |
ttattctgctgttaataatgaattttacctatagtc |
36601416 |
T |
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