View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9288_low_78 (Length: 221)
Name: NF9288_low_78
Description: NF9288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9288_low_78 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43672161 - 43672381
Alignment:
| Q |
1 |
cgccggaactaaacccaactccgacaccgctaactttgttctcaaccacttcacttccttaaaccttaaaacccacacaacatcttacaacgttcttctc |
100 |
Q |
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| T |
43672161 |
cgccggaactaaacccaactccgacaccgctaactttgttctcaaccacttcatttccttaaaccttaaaacccacacaacatcttacaacgttcttctc |
43672260 |
T |
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| Q |
101 |
tcttatccattacactcttcactctccatgcactttaacgatggttcatcttccaaccttggattaaccgaaccgggttcatccggttcagacatggttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
43672261 |
tcttatccattacactcttcactctccatgcactttaacgatggttcatcttccaaccttggattaaccgaaccgggttcatctggttcagacatggttc |
43672360 |
T |
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| Q |
201 |
atgcctaccatgcttactcac |
221 |
Q |
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|||||||||||||||| |||| |
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| T |
43672361 |
atgcctaccatgcttattcac |
43672381 |
T |
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