View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9290_low_13 (Length: 449)

Name: NF9290_low_13
Description: NF9290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9290_low_13
NF9290_low_13
[»] chr8 (41 HSPs)
chr8 (111-434)||(11945970-11946290)
chr8 (111-434)||(11925418-11925725)
chr8 (113-194)||(13013162-13013244)
chr8 (113-193)||(39311466-39311547)
chr8 (113-194)||(27751401-27751484)
chr8 (111-190)||(31835238-31835318)
chr8 (119-184)||(2433721-2433787)
chr8 (113-194)||(40668648-40668730)
chr8 (113-198)||(42668219-42668305)
chr8 (123-173)||(6655962-6656013)
chr8 (123-173)||(6736364-6736415)
chr8 (113-194)||(125263-125345)
chr8 (119-161)||(2610952-2610994)
chr8 (113-194)||(12179510-12179592)
chr8 (113-194)||(12423938-12424020)
chr8 (120-189)||(32986056-32986126)
chr8 (114-194)||(1770042-1770123)
chr8 (114-194)||(11169935-11170016)
chr8 (114-194)||(28192587-28192668)
chr8 (113-190)||(8878546-8878621)
chr8 (113-184)||(30465799-30465871)
chr8 (123-173)||(6745655-6745706)
chr8 (123-194)||(10633486-10633557)
chr8 (113-194)||(4586440-4586522)
chr8 (113-147)||(9021756-9021790)
chr8 (113-194)||(11602616-11602698)
chr8 (113-194)||(20052167-20052249)
chr8 (113-191)||(33356296-33356373)
chr8 (113-194)||(34114898-34114980)
chr8 (113-194)||(36102353-36102435)
chr8 (113-194)||(42641139-42641221)
chr8 (113-194)||(44060718-44060800)
chr8 (152-184)||(1201327-1201359)
chr8 (113-184)||(7766147-7766218)
chr8 (113-172)||(9407122-9407182)
chr8 (154-194)||(9655663-9655703)
chr8 (154-194)||(10605674-10605714)
chr8 (113-184)||(29197482-29197554)
chr8 (154-194)||(38656379-38656419)
chr8 (113-184)||(38662129-38662201)
chr8 (113-192)||(40714094-40714174)
[»] chr5 (40 HSPs)
chr5 (113-194)||(26402764-26402846)
chr5 (113-194)||(13408140-13408219)
chr5 (113-174)||(37036158-37036220)
chr5 (113-193)||(32400705-32400786)
chr5 (113-184)||(11875884-11875956)
chr5 (114-194)||(13641842-13641922)
chr5 (113-194)||(12444461-12444543)
chr5 (113-198)||(38298912-38298998)
chr5 (113-192)||(5160858-5160938)
chr5 (113-184)||(16453088-16453160)
chr5 (113-184)||(32618809-32618881)
chr5 (113-194)||(3971742-3971824)
chr5 (113-194)||(6516541-6516623)
chr5 (113-194)||(11930299-11930381)
chr5 (113-194)||(4210143-4210224)
chr5 (116-184)||(14478268-14478337)
chr5 (113-193)||(29654169-29654250)
chr5 (113-194)||(33686653-33686733)
chr5 (113-194)||(4000726-4000808)
chr5 (113-194)||(28137596-28137678)
chr5 (113-194)||(30896393-30896475)
chr5 (113-194)||(31124733-31124815)
chr5 (113-194)||(31199984-31200066)
chr5 (116-193)||(32128725-32128803)
chr5 (113-194)||(39025864-39025946)
chr5 (113-181)||(292222-292291)
chr5 (122-194)||(5234648-5234721)
chr5 (154-227)||(35360889-35360961)
chr5 (119-179)||(40152134-40152195)
chr5 (154-198)||(8557899-8557943)
chr5 (154-198)||(11875930-11875974)
chr5 (113-184)||(12726863-12726935)
chr5 (113-184)||(12788344-12788416)
chr5 (154-217)||(14042805-14042869)
chr5 (113-184)||(19149235-19149307)
chr5 (113-184)||(28619819-28619891)
chr5 (154-226)||(29096095-29096167)
chr5 (154-194)||(35907269-35907309)
chr5 (115-194)||(37445905-37445985)
chr5 (116-163)||(41578706-41578754)
[»] chr1 (39 HSPs)
chr1 (113-194)||(7236860-7236942)
chr1 (113-193)||(52510622-52510703)
chr1 (113-224)||(9479082-9479193)
chr1 (113-191)||(20754534-20754613)
chr1 (113-194)||(46939405-46939487)
chr1 (114-184)||(17632889-17632960)
chr1 (135-194)||(27494885-27494944)
chr1 (113-183)||(49658972-49659042)
chr1 (113-194)||(9780352-9780434)
chr1 (113-194)||(12300537-12300619)
chr1 (116-193)||(14292424-14292502)
chr1 (113-194)||(33826173-33826255)
chr1 (113-194)||(41885256-41885338)
chr1 (113-194)||(45143779-45143861)
chr1 (114-194)||(9003894-9003975)
chr1 (113-194)||(44242766-44242847)
chr1 (113-184)||(26821008-26821080)
chr1 (119-178)||(29752105-29752165)
chr1 (113-184)||(38213309-38213381)
chr1 (119-181)||(6418540-6418603)
chr1 (113-194)||(3592323-3592405)
chr1 (113-194)||(16987988-16988070)
chr1 (113-194)||(20748654-20748736)
chr1 (113-194)||(24972764-24972846)
chr1 (113-194)||(30364010-30364092)
chr1 (134-176)||(35878022-35878064)
chr1 (113-194)||(42283347-42283429)
chr1 (113-194)||(44463338-44463420)
chr1 (113-190)||(46947174-46947252)
chr1 (113-181)||(91503-91572)
chr1 (114-194)||(28868230-28868311)
chr1 (135-184)||(32589889-32589938)
chr1 (114-174)||(44621524-44621585)
chr1 (154-194)||(91546-91586)
chr1 (154-194)||(8760023-8760063)
chr1 (113-194)||(21276407-21276490)
chr1 (113-184)||(27156272-27156344)
chr1 (154-198)||(46917481-46917525)
chr1 (154-194)||(46947692-46947732)
[»] chr7 (37 HSPs)
chr7 (113-194)||(48154252-48154334)
chr7 (113-190)||(41097871-41097949)
chr7 (113-194)||(45864135-45864217)
chr7 (113-194)||(26339248-26339330)
chr7 (113-194)||(21973713-21973795)
chr7 (113-194)||(35471772-35471854)
chr7 (113-190)||(49077702-49077780)
chr7 (114-174)||(2870418-2870479)
chr7 (113-224)||(15648264-15648374)
chr7 (111-194)||(2873610-2873694)
chr7 (126-198)||(5470645-5470717)
chr7 (113-184)||(18803588-18803660)
chr7 (113-184)||(19204053-19204123)
chr7 (126-184)||(28554996-28555055)
chr7 (113-194)||(5851589-5851671)
chr7 (113-194)||(22202400-22202482)
chr7 (113-194)||(22235339-22235421)
chr7 (113-194)||(24463462-24463544)
chr7 (113-184)||(28554484-28554557)
chr7 (113-182)||(29635454-29635524)
chr7 (113-190)||(49077554-49077632)
chr7 (113-182)||(3730727-3730794)
chr7 (114-194)||(22867041-22867122)
chr7 (113-193)||(25784758-25784839)
chr7 (113-191)||(27246969-27247049)
chr7 (113-193)||(33654205-33654286)
chr7 (113-193)||(43725764-43725845)
chr7 (115-169)||(44481605-44481661)
chr7 (154-194)||(2394179-2394219)
chr7 (115-174)||(20164850-20164910)
chr7 (154-198)||(21707012-21707056)
chr7 (113-184)||(24915336-24915408)
chr7 (127-194)||(29128054-29128122)
chr7 (126-166)||(33005369-33005409)
chr7 (113-184)||(35304072-35304144)
chr7 (154-194)||(41648443-41648483)
chr7 (154-198)||(46298262-46298306)
[»] chr3 (50 HSPs)
chr3 (113-194)||(18386349-18386430)
chr3 (113-194)||(26370008-26370090)
chr3 (113-198)||(7865180-7865266)
chr3 (113-194)||(10522946-10523028)
chr3 (113-194)||(23550849-23550931)
chr3 (113-194)||(37671603-37671685)
chr3 (113-193)||(41992930-41993011)
chr3 (113-192)||(53582667-53582747)
chr3 (113-184)||(31388337-31388408)
chr3 (115-193)||(45779020-45779099)
chr3 (113-224)||(51842242-51842356)
chr3 (114-218)||(8015957-8016063)
chr3 (113-190)||(15007271-15007349)
chr3 (113-194)||(22607295-22607377)
chr3 (113-190)||(33463474-33463552)
chr3 (113-194)||(35460292-35460374)
chr3 (113-194)||(52252798-52252880)
chr3 (113-194)||(52459932-52460014)
chr3 (113-194)||(53594549-53594631)
chr3 (113-193)||(9693270-9693351)
chr3 (113-194)||(26703907-26703988)
chr3 (113-184)||(8255356-8255428)
chr3 (113-190)||(25587978-25588057)
chr3 (115-171)||(31496489-31496545)
chr3 (126-198)||(34661696-34661768)
chr3 (113-189)||(46006636-46006712)
chr3 (113-184)||(52169329-52169401)
chr3 (113-184)||(55378964-55379036)
chr3 (113-194)||(8150905-8150987)
chr3 (113-194)||(16146860-16146942)
chr3 (113-190)||(18713310-18713388)
chr3 (113-194)||(19159077-19159159)
chr3 (113-194)||(25799280-25799362)
chr3 (119-178)||(34628633-34628694)
chr3 (113-190)||(39176885-39176963)
chr3 (113-194)||(41187435-41187517)
chr3 (113-194)||(43081356-43081438)
chr3 (113-190)||(45474677-45474755)
chr3 (113-194)||(6223904-6223985)
chr3 (135-184)||(40134080-40134129)
chr3 (118-194)||(48911019-48911096)
chr3 (113-184)||(26256926-26256998)
chr3 (154-198)||(26859569-26859613)
chr3 (113-172)||(31401457-31401517)
chr3 (155-224)||(33804931-33805002)
chr3 (154-194)||(37671589-37671629)
chr3 (154-194)||(39176871-39176911)
chr3 (154-194)||(40550264-40550304)
chr3 (113-184)||(49552897-49552969)
chr3 (113-184)||(52587297-52587369)
[»] chr6 (13 HSPs)
chr6 (113-193)||(22734270-22734351)
chr6 (113-194)||(7575896-7575979)
chr6 (113-190)||(5524071-5524149)
chr6 (113-194)||(8677843-8677925)
chr6 (113-192)||(33858509-33858589)
chr6 (117-194)||(8440321-8440400)
chr6 (113-194)||(12462209-12462291)
chr6 (113-194)||(18804505-18804587)
chr6 (154-229)||(34188042-34188119)
chr6 (154-194)||(8037302-8037342)
chr6 (154-194)||(10402063-10402103)
chr6 (115-190)||(10686089-10686165)
chr6 (154-194)||(17545135-17545175)
[»] scaffold0683 (1 HSPs)
scaffold0683 (111-189)||(3429-3508)
[»] chr4 (33 HSPs)
chr4 (113-191)||(34402932-34403011)
chr4 (113-179)||(36491712-36491779)
chr4 (116-194)||(14254618-14254697)
chr4 (113-195)||(22422594-22422677)
chr4 (116-194)||(38348650-38348729)
chr4 (113-190)||(19037581-19037659)
chr4 (113-194)||(48736264-48736346)
chr4 (113-198)||(52960270-52960356)
chr4 (113-192)||(5092741-5092821)
chr4 (113-224)||(27979803-27979914)
chr4 (113-184)||(42916571-42916643)
chr4 (117-164)||(54441752-54441800)
chr4 (113-191)||(4415696-4415775)
chr4 (154-221)||(7744558-7744625)
chr4 (113-164)||(25810773-25810824)
chr4 (114-184)||(52439050-52439121)
chr4 (113-194)||(2904819-2904901)
chr4 (113-194)||(4116007-4116089)
chr4 (113-194)||(8080295-8080377)
chr4 (113-194)||(13428071-13428153)
chr4 (113-194)||(16078426-16078508)
chr4 (113-194)||(25108526-25108608)
chr4 (113-194)||(27285279-27285361)
chr4 (113-194)||(29097295-29097377)
chr4 (113-194)||(36703606-36703688)
chr4 (113-194)||(47805182-47805264)
chr4 (113-193)||(45756530-45756611)
chr4 (114-194)||(46959258-46959339)
chr4 (113-146)||(50683359-50683392)
chr4 (154-194)||(29146023-29146063)
chr4 (115-194)||(29771737-29771817)
chr4 (154-194)||(39652403-39652443)
chr4 (113-180)||(49333634-49333702)
[»] chr2 (26 HSPs)
chr2 (113-194)||(12611873-12611955)
chr2 (113-194)||(3021364-3021447)
chr2 (117-189)||(26062303-26062377)
chr2 (117-189)||(26068042-26068116)
chr2 (113-194)||(1378957-1379039)
chr2 (113-194)||(8811256-8811338)
chr2 (113-194)||(16064671-16064753)
chr2 (119-184)||(16403271-16403337)
chr2 (113-190)||(45133958-45134035)
chr2 (114-194)||(31900895-31900976)
chr2 (113-194)||(39120288-39120369)
chr2 (113-194)||(2630086-2630168)
chr2 (113-194)||(5612637-5612719)
chr2 (113-194)||(36741661-36741743)
chr2 (113-194)||(40073477-40073558)
chr2 (113-194)||(43942931-43943013)
chr2 (113-194)||(44159641-44159723)
chr2 (115-184)||(44537642-44537712)
chr2 (154-207)||(31666035-31666088)
chr2 (113-146)||(37342597-37342630)
chr2 (113-184)||(5475512-5475584)
chr2 (154-194)||(12565660-12565700)
chr2 (154-194)||(13242887-13242927)
chr2 (154-194)||(18381469-18381509)
chr2 (113-182)||(26401071-26401142)
chr2 (113-194)||(32901661-32901744)
[»] scaffold0128 (1 HSPs)
scaffold0128 (113-221)||(39580-39691)
[»] scaffold0164 (1 HSPs)
scaffold0164 (116-184)||(11018-11087)
[»] scaffold0111 (1 HSPs)
scaffold0111 (113-200)||(40572-40660)
[»] scaffold0196 (1 HSPs)
scaffold0196 (113-194)||(920-1002)
[»] scaffold0936 (1 HSPs)
scaffold0936 (154-221)||(825-893)
[»] scaffold0182 (1 HSPs)
scaffold0182 (113-192)||(17899-17979)
[»] scaffold0017 (1 HSPs)
scaffold0017 (154-194)||(34587-34627)


Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 111 - 434
Target Start/End: Complemental strand, 11946290 - 11945970
Alignment:
Q  111 atcaaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatatt 210  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||    
T  11946290 atcaaaacatgaattaaatatgaattttatgtttttt-cactgaaaaattcatacttaattcatgttttgttaagaaattttaactttttgaaaaatatt 11946192  T
Q  211 attataatattctaaacttccctgcaaacttttgaatgactaaaagtaaggactaaaattgtgaactgaatacttttgaagaactaaaagtcaattcttt 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| | |||||||| | ||||||||||||||||    
T  11946191 attataatattctaaacttccctgcaaacttttgaaggactaaaagtaaggactaatattgtaaactgaaaatttttgaaggattaaaagtcaattcttt 11946092  T
Q  311 tttcgaggaggactaaacaaaaagttggaaatatttataggaaacaaaaatatatttattccttttagttaacaatcatcatctttatttaagtacactc 410  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  11946091 ttctgaggaggactaaacaaaaagttggaaatatttataggaaacaaaaatatatttattccttttagttaac-atcatcattgctatttaagtacactc 11945993  T
Q  411 acatttgctttgcacttcactctt 434  Q
    |||||||| |||||||||||||||    
T  11945992 acatttgc-ttgcacttcactctt 11945970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 111 - 434
Target Start/End: Original strand, 11925418 - 11925725
Alignment:
Q  111 atcaaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatctttt-gttaagaaattctaactttgtgaaagatat 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  11925418 atcaaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatgtttttgttaagaaattctaactttttgaaagatat 11925517  T
Q  210 tattataatattctaaacttccctgcaaacttttgaatgactaaaagtaaggactaaaattgtgaactgaatacttttgaagaactaaaagtcaattctt 309  Q
    |||||||||||||||||||||||||||||||||||             ||||||||||||||| ||||||| | |||||||| | |||||||||||  ||    
T  11925518 tattataatattctaaacttccctgcaaacttttg-------------aaggactaaaattgtaaactgaaaatttttgaaggattaaaagtcaat--tt 11925602  T
Q  310 ttttcgaggaggactaaacaaaaagttggaaatatttataggaaacaaaaatatatttattccttttagttaacaatcatcatctttatttaagtacact 409  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  11925603 tttttgaggaggactaaacaaaaagttggaaatatttataggaaacaaaaatatatttattccttttagttaac-atcatcattgttatttaagtacact 11925701  T
Q  410 cacatttgctttgcacttcactctt 434  Q
    ||||||||| |||||||||||||||    
T  11925702 cacatttgc-ttgcacttcactctt 11925725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 13013162 - 13013244
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||||||| ||||||||| ||||||||| |||||||||    
T  13013162 caaaacatgaattaaatatgaacttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 13013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 39311547 - 39311466
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||||||| || |||||||   | ||||||||||| ||||||||| ||||||||| ||||||||    
T  39311547 caaaacatgaattaaatatgaatttttatatttttgaaggtaaaaaattcatatttaattcattttttgttaaaaaattcta 39311466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 27751401 - 27751484
Alignment:
Q  113 caaaacatgaattaaatatgaa--ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||  |||||| ||||||||  | || |||||||| ||||||||| ||||||||| |||||||||    
T  27751401 caaaacatgaattaaatatgaattttttatatttttgacggtaaataattcatatttaattcatgttttgttaaaaaattctaa 27751484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 31835238 - 31835318
Alignment:
Q  111 atcaaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||||| |||||| ||||||||  | || |||||||| ||||||||| ||||||||| |||||    
T  31835238 atcaaaacatgaattaaatatgaatttttatatttttgacggtaaacaattcatatttaattcatgttttgttaaaaaatt 31835318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 2433787 - 2433721
Alignment:
Q  119 atgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||| |||||||||  ||| ||||||||||| ||||||||| |||||||||    
T  2433787 atgaattaaatatgaatttttatgtttttggtacttaaaaattcatatttaattcatgttttgttaa 2433721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 40668648 - 40668730
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||| |||||||||||||||||||| || |||||| |  | ||||||||||| ||||||||| ||||||||| |||||||||    
T  40668648 caaaatatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 40668730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 42668305 - 42668219
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||||||| |||||| || |||||| || |||||||||||||    
T  42668305 caaaacatgaattaaatatgaatttttatatttttggctgttaaaaattcatatttaatttatgttttgtgaaaaaattctaacttt 42668219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 6656013 - 6655962
Alignment:
Q  123 attaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattca 173  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  6656013 attaaatatgaatttttatgtttttgacattgaaaaattcatatttaattca 6655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 6736415 - 6736364
Alignment:
Q  123 attaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattca 173  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  6736415 attaaatatgaatttttatgtttttgacattgaaaaattcatatttaattca 6736364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 125263 - 125345
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||||||  | |||| |||||| |||||| || ||||||||| |||||||||    
T  125263 caaaacatgaatttaatatgaatttttatatttttgacgattaaaagttcatatttaatttatgttttgttaaaaaattctaa 125345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 2610994 - 2610952
Alignment:
Q  119 atgaattaaatatgaattttatgtttttgacactgaaaaattc 161  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  2610994 atgaattaaatatgaattttatgtttttaacacttaaaaattc 2610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 12179510 - 12179592
Alignment:
Q  113 caaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||||||| ||| ||||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  12179510 caaaacatgaatttaatatgaatttatatattttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 12179592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 12423938 - 12424020
Alignment:
Q  113 caaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||||||| ||| ||||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  12423938 caaaacatgaatttaatatgaatttatatattttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 12424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 32986056 - 32986126
Alignment:
Q  120 tgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaat 189  Q
    ||||||||||||||||||| ||||||||  |||| ||||||||||| ||||||||| | ||||||| ||||    
T  32986056 tgaattaaatatgaatttttatgtttttagcacttaaaaattcatatttaattcatatcttgttaaaaaat 32986126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 1770042 - 1770123
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||||| || | ||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  1770042 aaaacatgaattaaatatgaatttttatatgtttggaggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 1770123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 11169935 - 11170016
Alignment:
Q  114 aaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| |||||||| |||||| ||||||||  | || |||||||| |||||| || ||||||||| |||||||||    
T  11169935 aaaacatgaatttaatatgaatttttatatttttgacggttaacaattcataattaatttatgttttgttaaaaaattctaa 11170016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 28192587 - 28192668
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||||| || |||||  |  | ||||||||||| |||||| || ||||||||| |||||||||    
T  28192587 aaaacatgaattaaatatgaatttttatattttttgcggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 28192668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 8878621 - 8878546
Alignment:
Q  113 caaaacatgaattaaatatg-aattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||| ||||||||||||||| ||||    |||||||| |||||||||  |||||||| |||||    
T  8878621 caaaacatgaattaaatatgaaattttatgtttttgtcact---taattcatatttaattcatggtttgttaaaaaatt 8878546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 30465799 - 30465871
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||||||| || ||||   || | ||||||||||| ||||||||| |||||||||    
T  30465799 caaaacatgaattaaatatgaatttttatattttaagcagtaaaaaattcatatttaattcatgttttgttaa 30465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 6745706 - 6745655
Alignment:
Q  123 attaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattca 173  Q
    ||||||||||| |||| |||||||||||| ||||||||||||| ||||||||    
T  6745706 attaaatatgattttttatgtttttgacattgaaaaattcatatttaattca 6745655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 10633557 - 10633486
Alignment:
Q  123 attaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||||||   | | ||||||||| |||||| || |||| |||| |||||||||    
T  10633557 attaaatatgaattttatgtttttgaagattacaaattcatatttaatttatgttttattaaaaaattctaa 10633486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 4586522 - 4586440
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||| ||||||||||||||||||||| || |||||   | | ||||||||||| |||||| || ||||||||| |||||||||    
T  4586522 caaatcatgaattaaatatgaatttttatattttttgtagttaaaaattcatatttaatttatgttttgttaaaaaattctaa 4586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 9021790 - 9021756
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttg 147  Q
    |||||||| ||||||||||||||||||||||||||    
T  9021790 caaaacataaattaaatatgaattttatgtttttg 9021756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 11602698 - 11602616
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||| ||||| |||||||||||| || ||||| ||| | ||||||||||| |||||| || ||| ||||| |||||||||    
T  11602698 caaaacacgaatttaatatgaatttttatattttttacagttaaaaattcatatttaatttatatttagttaaaaaattctaa 11602616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 20052167 - 20052249
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  20052167 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 20052249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 33356296 - 33356373
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattc 191  Q
    ||||||||||||||||||| |||||||| |||||  |  | ||||||| ||| ||||||||| ||||||||| ||||||    
T  33356296 caaaacatgaattaaatat-aattttatattttttgcggttaaaaatttatatttaattcatgttttgttaaaaaattc 33356373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 34114980 - 34114898
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | |||||   | ||||||||||| |||||| || ||||||||| |||||||||    
T  34114980 caaaacatgaatttaatatgaatttttatatgtttgatggttaaaaattcataattaatttatgttttgttaaaaaattctaa 34114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 36102353 - 36102435
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||| || |||||||| |||||| ||||||||  | ||||||| ||| |||||| || ||||||||| |||||||||    
T  36102353 caaaacatgattttaatatgaatttttatatttttgacggttaaaaattaatatttaatttatgttttgttaaaaaattctaa 36102435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 42641139 - 42641221
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||| | | ||||||||||| |||||| || |||||||||  ||||||||    
T  42641139 caaaacatgaatttaatatgaatttttatatgtttgatagttaaaaattcataattaatttatgttttgttaaataattctaa 42641221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 44060718 - 44060800
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | |||||   | ||||||||||| |||||| || ||||||||| |||||||||    
T  44060718 caaaacatgaatttaatatgaatttttatatgtttgatggttaaaaattcataattaatttatgttttgttaaaaaattctaa 44060800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 1201359 - 1201327
Alignment:
Q  152 tgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||||||||||||||    
T  1201359 tgaaaaattcatatttaattcatcttttgttaa 1201327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 7766218 - 7766147
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||| |||||||||||||   || ||||| ||||| | ||||||| |||||||||    
T  7766218 caaaacatgaattaaatatgaacttttatgtttttggagct-aaaaagtcatattaaattcatgttttgttaa 7766147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 9407182 - 9407122
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattc 172  Q
    |||| ||||||||||||||||| ||||||||||||| | || ||||||| ||| |||||||    
T  9407182 caaagcatgaattaaatatgaatttttatgtttttggcgcttaaaaatttatatttaattc 9407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 9655703 - 9655663
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  9655703 aaaaattcatactaaattcatgttttgttaaaaaattctaa 9655663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 10605674 - 10605714
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  10605674 aaaaattcatatttaattcatgttttgttaaaaaattctaa 10605714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 29197482 - 29197554
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||| ||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| || |||||||||    
T  29197482 caaaatatgaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatgttttgttaa 29197554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 38656379 - 38656419
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  38656379 aaaaattcatatttaattcatgttttgttaaaaaattctaa 38656419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 38662129 - 38662201
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| ||| ||||||||||||    | ||||||||| ||||||||||  |||||||||    
T  38662129 caaaacatgaattaaatataaatctttatgtttttggtgtttaaaaattcaaacttaattcaagttttgttaa 38662201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 40714174 - 40714094
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    |||||||||||||||||||||| |||||| |||||  |  | ||||| ||||| || |||||| ||||||||| |||||||    
T  40714174 caaaacatgaattaaatatgaacttttatattttttgcggtaaaaaaatcatattttattcatgttttgttaaaaaattct 40714094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 26402764 - 26402846
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || |||||||   ||||||||||||| ||||||||| ||||||||| |||||||||    
T  26402764 caaaacatgaattaaatatgaatttttatatttttgatggtgaaaaattcatatttaattcatgttttgttaaaaaattctaa 26402846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 13408219 - 13408140
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||||||||||||  | |  | ||||||||||| ||||||||| ||||||||| |||||||||    
T  13408219 caaaacatgaattaaatatgaattttatgttt--ggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 13408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 37036220 - 37036158
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcat 174  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||    
T  37036220 caaaacatgaattaaatatgaattttaatgtttttgacacttaaaaattcatttttaattcat 37036158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 32400705 - 32400786
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||||||| || ||||||||  | ||||||||||| ||||||||| ||||||||| ||| ||||    
T  32400705 caaaacatgaattaaatatgaatttttatatttttgacggtaaaaaattcatatttaattcatgttttgttaaaaaaatcta 32400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 11875956 - 11875884
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||||||| || ||||||||  | ||||||||||| ||||||||| |||||||||    
T  11875956 caaaacatgaattaaatatgaatttttatatttttgacgattaaaaattcatatttaattcatgttttgttaa 11875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 13641922 - 13641842
Alignment:
Q  114 aaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||||||||||  |  | ||| ||| ||||||||||||| ||||||| | |||||||||    
T  13641922 aaaacatgaattaaatatgaattttatgtttttttctattaaatatttatacttaattcatgttttgtttaaaaattctaa 13641842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 12444461 - 12444543
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||||||    
T  12444461 caaaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaattctaa 12444543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 38298912 - 38298998
Alignment:
Q  113 caaaacatgaattaaatatgaatttta-tgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    |||| |||||||||||||||||||||| | ||||||  ||| ||||||||||| | ||||||| || |||||| |||||||||||||    
T  38298912 caaagcatgaattaaatatgaattttaatatttttggtactaaaaaattcatattaaattcatgttatgttaaaaaattctaacttt 38298998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 5160938 - 5160858
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    |||||||||||||||||||||| |||||||||||||   || ||||||||| | | ||||||| ||||||||| |||||||    
T  5160938 caaaacatgaattaaatatgaatttttatgtttttggtgctcaaaaattcaaattaaattcatgttttgttaaaaaattct 5160858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 16453160 - 16453088
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||| |||||| |||||| || | ||||||| ||| ||||||||| |||||||||    
T  16453160 caaaacatgaattaaatatgaatttttatatttttggcagtaaaaaatttatatttaattcatgttttgttaa 16453088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 32618881 - 32618809
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||||||| || ||||||    | ||||||||||| |||||||||||||||||||    
T  32618881 caaaacatgaattaaatatgaatttttatatttttggaggtaaaaaattcatatttaattcatcttttgttaa 32618809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 3971742 - 3971824
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || |||||  |  | ||||||||||| || |||||| ||||||||| |||||||||    
T  3971742 caaaacatgaattaaatatgaatttttatattttttgcggtaaaaaattcatatttcattcatgttttgttaaaaaattctaa 3971824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 6516541 - 6516623
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || | ||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  6516541 caaaacatgaattaaatatgaatttttatatgtttggaggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 6516623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 11930381 - 11930299
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||| ||||| |||||||||||| || | ||||||  | ||||||||||| |||||| |||||||||||| |||||||||    
T  11930381 caaaacaagaatttaatatgaatttttatatatttgacggttaaaaattcatatttaatttatcttttgttaaaaaattctaa 11930299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 4210143 - 4210224
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||||| |||||||   | ||||||||||| | |||| || |||| |||| |||||||||    
T  4210143 caaaacatgaatttaatatgaattttatatttttgatggttaaaaattcatattaaatttatgttttcttaaaaaattctaa 4210224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 14478337 - 14478268
Alignment:
Q  116 aacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| |||||| ||||| ||| | ||||||||||| |||||| || |||||||||    
T  14478337 aacatgaattaaatatgaatttttatattttttacagttaaaaattcatatttaatttatgttttgttaa 14478268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 29654169 - 29654250
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||| |||||| ||||||||  | ||||||||||| |||||  || ||| ||||| ||||||||    
T  29654169 caaaacatgaattaaatatgaatttttatatttttgacggttaaaaattcatatttaatatatgtttagttaaaaaattcta 29654250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 33686733 - 33686653
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| ||||||||  | ||||| ||||  ||||||||| |||||||||  ||||||||    
T  33686733 caaaacatgaattaaatatgaatttttatatttttgacggtaaaaaactcat--ttaattcatgttttgttaaagaattctaa 33686653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 4000726 - 4000808
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  4000726 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 4000808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 28137596 - 28137678
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  28137596 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 28137678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 30896475 - 30896393
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  30896475 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 30896393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 31124733 - 31124815
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  31124733 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 31124815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 31200066 - 31199984
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||| |||| || ||||||||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  31200066 caaaacatgaatttaatatgattttttatatttttgacggttaaaaattcatatttaatttgtattttgttaaaaaattctaa 31199984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 32128725 - 32128803
Alignment:
Q  116 aacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||||||||||||| || ||||| |   | ||||||||||| ||||||||| |||| |||| ||||||||    
T  32128725 aacatgaattaaatatgaatttttatattttttatggtaaaaaattcatatttaattcatgttttattaaaaaattcta 32128803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 39025946 - 39025864
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  39025946 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 39025864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 292291 - 292222
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgt 181  Q
    |||||||||||||||||||||||||| || |||||  |  | ||||||||||| ||||||||| ||||||    
T  292291 caaaacatgaattaaatatgaatttttatattttttgcggtaaaaaattcatatttaattcatattttgt 292222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 5234648 - 5234721
Alignment:
Q  122 aattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||| ||||||||  | |||||||| || ||||||||| ||||||| | |||||||||    
T  5234648 aattaaatatgaatttttatatttttgacggttaaaaattcttatttaattcatattttgttgaaaaattctaa 5234721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 35360889 - 35360961
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatattattataatattctaaac 227  Q
    |||||| |||| || |||||| ||||||||| ||||||||  ||| | ||||||||| ||||||||||||||||    
T  35360889 aaaaatgcatattttattcatgttttgttaaaaaattctacttttct-aaagatatttttataatattctaaac 35360961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 40152134 - 40152195
Alignment:
Q  119 atgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatctttt 179  Q
    |||||||||||||||||||| |||||| || | || ||||||||||| ||||||||| ||||    
T  40152134 atgaattaaatatgaatttttatgtttctgtcgctaaaaaattcatatttaattcatgtttt 40152195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 8557899 - 8557943
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    
T  8557899 aaaaattcatactaaattcatgttttgttaaaaaaatctaacttt 8557943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 11875930 - 11875974
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||| ||||||||| ||||||||| |||||||| ||||    
T  11875930 aaaaattcatatttaattcatgttttgttaaaaaattctagcttt 11875974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 12726935 - 12726863
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||| |||||| ||||||||| | ||||||| ||| | |||| || |||||||||    
T  12726935 caaaacatgaatttaatatgaatttttatatttttgacagttaaaaattaatattaaatttatgttttgttaa 12726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 12788416 - 12788344
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||| |||||| ||||||||| | ||||||| ||| | |||| || |||||||||    
T  12788416 caaaacatgaatttaatatgaatttttatatttttgacagttaaaaattaatattaaatttatgttttgttaa 12788344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 14042869 - 14042805
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa-ctttgtgaaagatattattataa 217  Q
    ||||||||||| ||||||||||||| ||||| ||| |||||  ||| |||||||||||| |||||    
T  14042869 aaaaattcatatttaattcatctttcgttaaaaaaatctaatttttatgaaagatattagtataa 14042805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 19149307 - 19149235
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||| ||| |||||||||||| |||||||||||| |  || ||||||||||| |||||| || |||||||||    
T  19149307 caaaagatggattaaatatgaacttttatgttttttatgcttaaaaattcatatttaattaatgttttgttaa 19149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 28619819 - 28619891
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| || |||||| |||||| |  | ||||||||||| ||||||||  |||||||||    
T  28619819 caaaacatgaattaaatataaatttttatatttttggcggtaaaaaattcatatttaattcacgttttgttaa 28619891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 29096167 - 29096095
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatattattataatattctaaa 226  Q
    ||||||||||| || |||||| ||||||||| ||||||||  ||| ||||| | ||| |||||||||| ||||    
T  29096167 aaaaattcatatttgattcatgttttgttaaaaaattctatttttttgaaaaagattcttataatattataaa 29096095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 35907269 - 35907309
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||||||| ||||| |||||||||    
T  35907269 aaaaattcataattaattcatctttagttaaaaaattctaa 35907309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 37445985 - 37445905
Alignment:
Q  115 aaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||| |||||| || |||||| |  | ||||||||||| || ||| || ||||||||| |||||||||    
T  37445985 aaacatgaattaaatataaatttttatatttttggccataaaaaattcatatttgatttatgttttgttaaaaaattctaa 37445905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 41578706 - 41578754
Alignment:
Q  116 aacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcat 163  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  41578706 aacatgaattaaatatgaatttttatgtttttggtactaaaaaattcat 41578754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 7236860 - 7236942
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || ||||||||  | ||||||||||| ||||||||| ||||||||| |||||||||    
T  7236860 caaaacatgaattaaatatgaatttttatatttttgacggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 7236942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 52510622 - 52510703
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||||||| || |||||| |  | ||||||||||| ||||||||| ||||||||| ||||||||    
T  52510622 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattcta 52510703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 9479082 - 9479193
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttg-ttaagaaattctaactttgtgaaagatatta 211  Q
    |||||||||||||||||||||||||||| ||||| ||| | ||||||||||| |||||| || ||||| |||| ||||||||| ||| |   | |||||     
T  9479082 caaaacatgaattaaatatgaattttatatttttaacagttaaaaattcatatttaatt-atgttttgcttaaaaaattctaatttttttctaaatattt 9479180  T
Q  212 ttataatattcta 224  Q
    |||||||||||||    
T  9479181 ttataatattcta 9479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 20754534 - 20754613
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattc 191  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||||||| ||||||||| ||||||||| ||||||    
T  20754534 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattc 20754613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 46939487 - 46939405
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||||||    
T  46939487 caaaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaattctaa 46939405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 17632889 - 17632960
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||  |||||||||||||||| || |||||| |||| ||||||||||| ||||||||| |||||||||    
T  17632889 aaaacatagattaaatatgaattttgatatttttggcactaaaaaattcatatttaattcatgttttgttaa 17632960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 27494944 - 27494885
Alignment:
Q  135 ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| ||||| ||||||||||| || |||||| ||||||||| |||||||||    
T  27494944 ttttatgttttttacacttaaaaattcatatttgattcatgttttgttaaaaaattctaa 27494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 49659042 - 49658972
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgtta 183  Q
    ||||| |||||||||| ||||| ||||||||||||| |||| ||||||||||| ||||||||| ||||||||    
T  49659042 caaaatatgaattaaa-atgaacttttatgtttttggcacttaaaaattcataattaattcatgttttgtta 49658972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 9780352 - 9780434
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||| |||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  9780352 caaatcatgaatttaatatgaatttttatatttttgactgttaaaaattcatatttaatttatgttttgttaaaaaattctaa 9780434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 12300619 - 12300537
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || | ||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  12300619 caaaacatgaattaaatatgaatttttatatgtttggaggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 12300537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 14292424 - 14292502
Alignment:
Q  116 aacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||||||||||||| || |||||||   | ||||||||||| | ||||||| ||||||||| ||||||||    
T  14292424 aacatgaattaaatatgaatttttatatttttgatggtaaaaaattcatattgaattcatgttttgttaaaaaattcta 14292502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 33826173 - 33826255
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | |||| |||||| |||||| || ||||||||| |||||||||    
T  33826173 caaaacatgaattaaatatgaatttttatatttttggcggttaaaatttcatatttaatttatgttttgttaaaaaattctaa 33826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 41885338 - 41885256
Alignment:
Q  113 caaaacatgaattaaatatgaatt-ttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||| ||||||||||||| |||| ||||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  41885338 caaaacatgagttaaatatgaattattatatttttggtggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 41885256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 45143779 - 45143861
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  45143779 caaaacatgaatttaatatgaatttttatatgtttgacggttaaaaattcataattaatttatgttttgttaaaaaattctaa 45143861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 9003975 - 9003894
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| |||||||||||| || ||||| ||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  9003975 aaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 9003894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 44242766 - 44242847
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||| ||| ||||| ||  | |||||||| || |||||| || |||| |||| |||||||||    
T  44242766 caaaacatgaattaaatatgaattatatattttttacggttaaaaattcttatttaatttatgttttattaaaaaattctaa 44242847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 26821008 - 26821080
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| |||||| || |||||| |  | ||||||||||| ||||||||| |||||||||    
T  26821008 caaaacatgaattaaatataaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaa 26821080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 29752165 - 29752105
Alignment:
Q  119 atgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttt 178  Q
    |||||||||||||||| ||| ||||||||| | || ||||||||||| |||||||||||||    
T  29752165 atgaattaaatatgaaatttcatgtttttggcgcttaaaaattcatagttaattcatcttt 29752105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 38213309 - 38213381
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||| |||||| ||||||||  | ||||||||||| |||||| || |||||||||    
T  38213309 caaaacatgaatttaatatgaaattttatatttttgacggttaaaaattcatatttaatttatgttttgttaa 38213381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 6418540 - 6418603
Alignment:
Q  119 atgaattaaatatgaattttatgttttt-gacactgaaaaattcatacttaattcatcttttgt 181  Q
    |||||||||||||||||||||||||||| |||||| |||| || ||| |||||| || ||||||    
T  6418540 atgaattaaatatgaattttatgtttttggacacttaaaagttaatatttaattgatgttttgt 6418603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 3592405 - 3592323
Alignment:
Q  113 caaaacatgaattaaatatgaatt-ttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||| |||||||||   | || | ||||| ||| |||||| || ||||||||| |||||||||    
T  3592405 caaaacatgaattaaatatgaattgttatgttttaagcgcttagaaattaatatttaattaatattttgttaaaaaattctaa 3592323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 16987988 - 16988070
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  16987988 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 16988070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 20748736 - 20748654
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  20748736 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 20748654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 24972846 - 24972764
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  24972846 caaaacatgaatttaatatgaatttttatatttttgaaggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 24972764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 30364010 - 30364092
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||| ||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  30364010 caaaacatgaatttaatatgaatttttatatgttttaccgttaaaaattcatatttaatttatgttttgttaaaaaattctaa 30364092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 35878022 - 35878064
Alignment:
Q  134 attttatgtttttgacactgaaaaattcatacttaattcatct 176  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||    
T  35878022 attttatgtttttgacacttaaaaattcatatttaatccatct 35878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 42283429 - 42283347
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||| |||||||| |||||||||||| || ||||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  42283429 caaatcatgaatttaatatgaatttttatattttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 42283347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 44463338 - 44463420
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  44463338 caaaacatgaatttaatatgaatttttatattttttacgattaaaaattcatatttaatttgtgttttgttaaaaaattctaa 44463420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 46947252 - 46947174
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||||||| || |||||  |  | ||||||||||| |||||| || ||||||||| |||||    
T  46947252 caaaacatgaattaaatatgaatttttatattttttgcggtaaaaaattcatatttaatttattttttgttaaaaaatt 46947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 91572 - 91503
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgt 181  Q
    |||||||||||||||||||||| |||||| ||||||| | | ||||||||||| | |||| || ||||||    
T  91572 caaaacatgaattaaatatgaatttttatatttttgatagttaaaaattcatattaaatttatattttgt 91503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 28868230 - 28868311
Alignment:
Q  114 aaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| |||||||| |||||| | ||||||  | |||||||||||  ||||| || ||||||||| |||||||||    
T  28868230 aaaacatgaatttaatatgaatttttatatgtttgacggttaaaaattcataaataatttatgttttgttaaaaaattctaa 28868311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 32589938 - 32589889
Alignment:
Q  135 ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||| ||||||||| | ||||||||||| ||||||||| |||||||||    
T  32589938 ttttatatttttgacaataaaaaattcatatttaattcatgttttgttaa 32589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 44621585 - 44621524
Alignment:
Q  114 aaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcat 174  Q
    ||||||| |||||||||||||||| ||||||||| || || |||||| |||| |||||||||    
T  44621585 aaaacataaattaaatatgaatttctatgttttttactcttaaaaatgcatatttaattcat 44621524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 91546 - 91586
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  91546 aaaaattcatatttaattcatgttttgttaaaaaattctaa 91586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 8760023 - 8760063
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  8760023 aaaaattcatatttaattcatgttttgttaaaaaattctaa 8760063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 21276490 - 21276407
Alignment:
Q  113 caaaacatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||| |||| ||||||  || |||||||   | ||||||||||| |||||| || ||||||||| |||||||||    
T  21276490 caaaacatgaattacatataaatttttgatatttttgaaggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 21276407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 27156344 - 27156272
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| | |||| ||||||||  |||| ||||||||||| |||||| || ||| |||||    
T  27156344 caaaacatgaattaaatatcattttttatgtttttagcacttaaaaattcatatttaatttatgtttggttaa 27156272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 46917525 - 46917481
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||| | ||||||| ||||||||| |||||||||||||    
T  46917525 aaaaattcatattaaattcatgttttgttaaaaaattctaacttt 46917481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 46947732 - 46947692
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  46947732 aaaaattcatatttaattcatgttttgttaaaaaattctaa 46947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 48154252 - 48154334
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || |||||| |  | ||||||||||| ||||||||| ||||||||| |||||||||    
T  48154252 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 48154334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 41097871 - 41097949
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| |||||||||||| || ||||||||  | |||||||||||||||||| || ||||||||| |||||    
T  41097871 caaaacatgaatttaatatgaatttttatatttttgacgattaaaaattcatacttaatttatgttttgttaaaaaatt 41097949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 45864217 - 45864135
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  45864217 caaaacatgaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 45864135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 26339248 - 26339330
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||| |||  |||||||| ||||||||| |||||||||    
T  26339248 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaatttatatntaattcatgttttgttaaaaaattctaa 26339330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 21973795 - 21973713
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || | ||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  21973795 caaaacatgaattaaatatgaatttttatatgtttggagataaaaaattcatatttaattcatgttttgttaaaaaattctaa 21973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 35471854 - 35471772
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || ||||||    | ||||||||||| || |||||| ||||||||| |||||||||    
T  35471854 caaaacatgaattaaatatgaatttttatatttttggaggtaaaaaattcatatttgattcatgttttgttaacaaattctaa 35471772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 49077780 - 49077702
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| || ||||||||| |||||    
T  49077780 caaaacatgaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatgttttgttaaaaaatt 49077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 2870479 - 2870418
Alignment:
Q  114 aaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcat 174  Q
    ||||||| | |||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  2870479 aaaacataagttaaatatgaatttgtatgtttttgacgtttaaaaattcatacttaattcat 2870418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 15648264 - 15648374
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatatta 211  Q
    ||||||||||||| |||||||||||| || |||||||   | ||||||||||| | |||| || ||||||||| ||||||||| |||| |||  |||||     
T  15648264 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaattttgggaa--atattt 15648361  T
Q  212 ttataatattcta 224  Q
    ||| |||||||||    
T  15648362 ttacaatattcta 15648374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 2873610 - 2873694
Alignment:
Q  111 atcaaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||| |||||||| |||||| ||||| | | | ||||||||||| ||||||  | ||||||||| |||||||||    
T  2873610 atcaaaacatgaatttaatatgaatttttatattttttaaagttaaaaattcatatttaatttttgttttgttaaaaaattctaa 2873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 5470645 - 5470717
Alignment:
Q  126 aaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||||||| |||||| |  | ||||||||||| |||||| || ||||||||| ||||| |||||||    
T  5470645 aaatatgaattttatatttttggcggttaaaaattcatatttaatttatgttttgttaaaaaattataacttt 5470717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 18803588 - 18803660
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||||| |||||| ||||||  | | ||||||||||| |||||| || |||||||||    
T  18803588 caaaacatgaattaaatatgaatttttatatttttggaagttaaaaattcatatttaatttatgttttgttaa 18803660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 19204053 - 19204123
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||| ||||||| ||||| ||| | ||||||||| | |||||| || |||||||||    
T  19204053 caaaacatgaattaaatatg-attttatattttttacagttaaaaattcaaaattaatttatgttttgttaa 19204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 28554996 - 28555055
Alignment:
Q  126 aaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||| || | |||||||||||||| ||||||||| |||||||||    
T  28554996 aaatatgaatttttatgtttctggcgctgaaaaattcatatttaattcatgttttgttaa 28555055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 5851589 - 5851671
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  5851589 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 5851671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 22202482 - 22202400
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  22202482 caaaacatgaatttaatatgaatttttatattttttaccgttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 22202400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 22235339 - 22235421
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  22235339 caaaacatgaatttaatatgaatttttatattttttaccgttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 22235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 24463462 - 24463544
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||||||  | ||||||||||| || |||  | ||||||||| |||||||||    
T  24463462 caaaacatgaatttaatatgaatttttatatttttgacggttaaaaattcatattttatttgtgttttgttaaaaaattctaa 24463544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 28554484 - 28554557
Alignment:
Q  113 caaaacatgaattaaatatgaa--ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||| ||||||||||||| ||  ||||||||||||||| || |||| || ||| ||||||||| |||||||||    
T  28554484 caaaatatgaattaaatataaaatttttatgtttttgacgcttaaaattttatatttaattcatgttttgttaa 28554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 29635454 - 29635524
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgtt 182  Q
    |||||||||||||| ||||||| |||||||||||||   || ||||||||||| | ||||||| |||||||    
T  29635454 caaaacatgaattagatatgaatttttatgtttttggtgctaaaaaattcatattgaattcatgttttgtt 29635524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 49077632 - 49077554
Alignment:
Q  113 caaaacatgaattaaatatgaatttta-tgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| ||||||| ||||| | ||||||||  | ||||||||||| |||||| || ||||||||| |||||    
T  49077632 caaaacatgaatttaatatgagttttaatatttttgacggttaaaaattcatagttaatttatgttttgttaaaaaatt 49077554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 3730794 - 3730727
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgtt 182  Q
    |||||||||||||||||||||| |||||||||||  || |  |||||||||| ||||||||| |||||||    
T  3730794 caaaacatgaattaaatatgaa-tttatgttttttgcagt-taaaattcatatttaattcatattttgtt 3730727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 22867122 - 22867041
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||| |||| |||||||||||| || ||||||||  | ||||||||||| |||||| || | ||||||| |||||||||    
T  22867122 aaaacataaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatgtattgttaaaaaattctaa 22867041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 25784839 - 25784758
Alignment:
Q  113 caaaacatgaattaaatatgaatttta-tgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||| |||| |||||||  | ||||||||  | ||||||||||| |||||| || ||||||||| ||||||||    
T  25784839 caaaacatgaatttaatacgaatttttctatttttgacggttaaaaattcatatttaatttatgttttgttaaaaaattcta 25784758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 27247049 - 27246969
Alignment:
Q  113 caaaacatgaattaaatatgaat--tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattc 191  Q
    |||||||||||| ||||||||||  |||||||||||| | |  | ||||||||| |||||| || ||||||||| ||||||    
T  27247049 caaaacatgaatcaaatatgaattgtttatgtttttggcgcgtagaaattcataattaatttatgttttgttaaaaaattc 27246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 33654205 - 33654286
Alignment:
Q  113 caaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||| ||||||||||| ||| ||||| ||  | ||||||||||| |||||| || ||||||| | ||||||||    
T  33654205 caaaacatgaatttaatatgaatttatatattttttacggttaaaaattcatatttaatttatgttttgttgaaaaattcta 33654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 43725845 - 43725764
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| |||||| || ||||| ||| ||||||||    
T  43725845 caaaacatgaatttaatatgaatttttatatttttgaaggttaaaaattcatatttaatttatgttttgctaaaaaattcta 43725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 44481661 - 44481605
Alignment:
Q  115 aaacatgaattaaatatgaa--ttttatgtttttgacactgaaaaattcatacttaa 169  Q
    ||||||||||||||||||||  ||||||||||||| |||| ||||||| ||| ||||    
T  44481661 aaacatgaattaaatatgaattttttatgtttttgtcacttaaaaatttatatttaa 44481605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 2394219 - 2394179
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  2394219 aaaaattcatatttaattcatgttttgttaaaaaattctaa 2394179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 20164910 - 20164850
Alignment:
Q  115 aaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcat 174  Q
    |||||||||||||||||||| |||||||||||||   || ||||||||||| | |||||||    
T  20164910 aaacatgaattaaatatgaatttttatgtttttggtgctaaaaaattcatattaaattcat 20164850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 21707012 - 21707056
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||||    
T  21707012 aaaaattcatatttaattcatgttttgttaaaaaattataacttt 21707056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 24915336 - 24915408
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||| ||||||||||||| |||||| ||||||||  | ||||||| ||| |||||| || |||||||||    
T  24915336 caaaacataaattaaatatgaatttttatatttttgacggttaaaaattaatatttaatttatgttttgttaa 24915408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 29128054 - 29128122
Alignment:
Q  127 aatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| || |||||||  || ||||||||||| |||||| || ||||||||| |||||||||    
T  29128054 aatatgaatttttatatttttgaagcttaaaaattcatatttaatttatgttttgttaaaaaattctaa 29128122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 33005409 - 33005369
Alignment:
Q  126 aaatatgaattttatgtttttgacactgaaaaattcatact 166  Q
    ||||||||||||||||||||| || || |||||||||||||    
T  33005409 aaatatgaattttatgtttttaacgcttaaaaattcatact 33005369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 35304072 - 35304144
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||| || |||| ||||||||||   | ||||||||||| | ||||||| |||||||||    
T  35304072 caaaacatgaattaaataagattttttatgtttttgaggttaaaaaattcatattaaattcatgttttgttaa 35304144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 41648443 - 41648483
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  41648443 aaaaattcatactaaattcatgttttgttaaaaaattctaa 41648483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 46298306 - 46298262
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||||| || |||| ||||||||| |||||||||||||    
T  46298306 aaaaattcatactaaaatcatgttttgttaaaaaattctaacttt 46298262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 18386430 - 18386349
Alignment:
Q  113 caaaacatgaattaaatatgaatttta-tgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||| ||||||||| | ||||||||| |  |||||||||| ||||||||||||||||||| |||||||||    
T  18386430 caaaacatgaattaaatttgaattttaatatttttgacagtataaaattcatatttaattcatcttttgttaa-aaattctaa 18386349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 26370008 - 26370090
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || |||||| || | ||||||||||| ||||||||| ||||||||| || ||||||    
T  26370008 caaaacatgaattaaatatgaatttttatatttttggcagtaaaaaattcatatttaattcatgttttgttaaaaatttctaa 26370090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 7865266 - 7865180
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    |||||| | ||||||||||||||||| || ||||| ||| | ||||||||||| |||||| || ||||||||| |||||||||||||    
T  7865266 caaaacctaaattaaatatgaatttttatattttttacagttaaaaattcatatttaatttatgttttgttaaaaaattctaacttt 7865180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 10523028 - 10522946
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||||||| | ||||||||||| |||||| || ||||||||| |||||||||    
T  10523028 caaaacatgaatttaatatgaatttttatatatttgacagttaaaaattcatatttaatttatgttttgttaaaaaattctaa 10522946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 23550931 - 23550849
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||||||    
T  23550931 caaaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaattctaa 23550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 37671603 - 37671685
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||||||||||   || ||||||||||| |||||| || ||||||||| ||| |||||    
T  37671603 caaaacatgaattaaatatgaatttttatgtttttggagcttaaaaattcatatttaatttatattttgttaaaaaaatctaa 37671685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 41993011 - 41992930
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||| ||||||||||||    || ||||||||||| | ||||||| ||||||||| ||||||||    
T  41993011 caaaacatgaattaaatatgaatttttatgttttttgtgctaaaaaattcatattaaattcatgttttgttaaaaaattcta 41992930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 53582747 - 53582667
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    |||||||||||||||||||||| |||||| ||||| ||  | ||||||||||| ||||||||| |||| |||| |||||||    
T  53582747 caaaacatgaattaaatatgaatttttatattttttacggtaaaaaattcatatttaattcatgttttattaaaaaattct 53582667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 31388408 - 31388337
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||| |||||||||| ||||| ||  | ||||||||||| |||| |||| |||||||||    
T  31388408 caaaacatgaattaaatttgaattttatattttttacgtttaaaaattcatatttaaatcatgttttgttaa 31388337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 45779020 - 45779099
Alignment:
Q  115 aaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||| |||||| |||||| |  | ||||||||||| ||||||||| ||| ||||| ||||||||    
T  45779020 aaacatgaattaaatatgaaattttatatttttggcggttaaaaattcatatttaattcatgtttagttaaaaaattcta 45779099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 51842356 - 51842242
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgtt--aagaaattctaac-tttgtgaaagatat 209  Q
    |||||||||||||||||||||||||||||||||||   || ||||||||||  |||||| || |||| ||     |||||||||| ||| || |||||||    
T  51842356 caaaacatgaattaaatatgaattttatgtttttggtgcttaaaaattcatctttaattaatgttttttttcttcaaattctaacttttttggaagatat 51842257  T
Q  210 tattataatattcta 224  Q
    | |||||||||||||    
T  51842256 tgttataatattcta 51842242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 8016063 - 8015957
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaac-tttgtgaaagatatta 211  Q
    ||||||||||||| || |||||||| ||||||||| |  | ||||||| ||| ||||||||| ||||||||| ||||| |||| ||| ||| |||||||     
T  8016063 aaaacatgaattacatttgaatttttatgtttttggccattaaaaattgatatttaattcatgttttgttaaaaaattataacttttttgagagatattt 8015964  T
Q  212 ttataat 218  Q
    |||||||    
T  8015963 ttataat 8015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 15007349 - 15007271
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||    
T  15007349 caaaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaatt 15007271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 22607377 - 22607295
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  22607377 caaaacatgaatttaatatgaatttttatattttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 22607295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 33463552 - 33463474
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||||||| || ||||||    | ||||||||||| ||||||||| ||||||||| |||||    
T  33463552 caaaacatgaattaaatatgaatttttatatttttggtggtaaaaaattcatatttaattcatgttttgttaaaaaatt 33463474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 35460292 - 35460374
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| ||  |||||||| |||||||||    
T  35460292 caaaacatgaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatggtttgttaaaaaattctaa 35460374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 52252880 - 52252798
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||| |||||||||| || |||||||   | ||||||||||| ||||||||| ||||||||| ||| |||||    
T  52252880 caaaacatgaattaactatgaatttttatatttttgaaggtaaaaaattcatatttaattcatgttttgttaaaaaaatctaa 52252798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 52459932 - 52460014
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| |||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||||||    
T  52459932 caaaacatgaaataaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaattctaa 52460014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 53594549 - 53594631
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  53594549 caaaacatgaatttaatatgaatttttatatgtttgacggttaaaaattcataattaatttatgttttgttaaaaaattctaa 53594631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 9693270 - 9693351
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||| |||||||||| |||||| ||||||||| || | ||||||||||| |||||| || ||||||||| | ||||||    
T  9693270 caaaacataaattaaatattaatttttatgtttttggcagttaaaaattcatatttaatttatgttttgttaaaatattcta 9693351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 26703988 - 26703907
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||||| | ||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  26703988 caaaacatgaatttaatatgaattttatatgttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 26703907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 8255428 - 8255356
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||||||| ||| |||||||  | || ||||||||| | ||||||||| |||||||||    
T  8255428 caaaacatgaattaaatatgaatgtttttgttttttgcgcttaaaaattcacatttaattcatgttttgttaa 8255356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 25587978 - 25588057
Alignment:
Q  113 caaaacatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||| ||||||||||||||||||||  |||| ||||   || ||||||||||| ||||||||| ||||||||| |||||    
T  25587978 caaaatatgaattaaatatgaattttttatgtgtttggtgcttaaaaattcatatttaattcatgttttgttaaaaaatt 25588057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 31496545 - 31496489
Alignment:
Q  115 aaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaatt 171  Q
    |||||| ||||||||||||||||||||||||| || || ||||||| ||| ||||||    
T  31496545 aaacataaattaaatatgaattttatgtttttaacgcttaaaaatttatatttaatt 31496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 34661696 - 34661768
Alignment:
Q  126 aaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||||||| |||||  |  | ||||||||| | ||||||||| ||||||||| |||||||||||||    
T  34661696 aaatatgaattttatatttttagcgataaaaaattcaaatttaattcatgttttgttaaaaaattctaacttt 34661768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 46006636 - 46006712
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaat 189  Q
    |||||||| ||||||||||||||||||| ||||| |   | ||||||||||| |||||| || ||||||||| ||||    
T  46006636 caaaacataaattaaatatgaattttatattttttatggttaaaaattcatatttaatttatgttttgttaaaaaat 46006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 52169329 - 52169401
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||| ||||||||||||||||| || |||||| |  | ||||||||||| ||||||||| |||||||||    
T  52169329 caaaacataaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaa 52169401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 55378964 - 55379036
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||| ||||||||||||||||| || ||||| ||  | ||||||||||| ||||||||| |||||||||    
T  55378964 caaaacataaattaaatatgaatttttatattttttacggtaaaaaattcatatttaattcatgttttgttaa 55379036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 8150905 - 8150987
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||||||| |||||| || ||||||  | |||||||||    
T  8150905 caaaacatgaattaaatatgaatttttatatttttggcggttaaaaattcatatttaatttatgttttgtacaaaaattctaa 8150987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 16146860 - 16146942
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||| |   | ||||||||||| |||||| || ||||||||| |||||||||    
T  16146860 caaaacatgaatttaatatgaatttttatattttttatggttaaaaattcataattaatttatgttttgttaaaaaattctaa 16146942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 18713310 - 18713388
Alignment:
Q  113 caaaacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| ||||||||||| ||| ||||||||  | |||||||||||  ||||| || ||||||||| |||||    
T  18713310 caaaacatgaatttaatatgaatttctatatttttgacggttaaaaattcatatctaatttatgttttgttaaaaaatt 18713388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 19159077 - 19159159
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||||| ||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  19159077 caaaacatgaatttaatatgaatatttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 19159159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 25799362 - 25799280
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||| || ||||| ||||||||    || ||||||||||||| ||||||| ||||||||| || ||||||    
T  25799362 caaaacatgaattaaatgtgtatttttatgttttttgtgctaaaaaattcatactaaattcatgttttgttaaaaagttctaa 25799280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 34628694 - 34628633
Alignment:
Q  119 atgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttt 178  Q
    ||||||||||||||||||||  |||| ||||||||| ||| |||||||  ||||||||||||    
T  34628694 atgaattaaatatgaattttttatgtatttgacacttaaacattcatatataattcatcttt 34628633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 39176885 - 39176963
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||||||| || | |||||   | ||||||||||| || |||||| ||||||||| |||||    
T  39176885 caaaacatgaattaaatatgaatttttatatgtttgatggttaaaaattcatatttgattcatgttttgttaaaaaatt 39176963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 41187517 - 41187435
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  41187517 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 41187435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 43081356 - 43081438
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  43081356 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 43081438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 45474677 - 45474755
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||||||||||| |||||| || ||||||||| |||||    
T  45474677 caaaacatgaatttaatatgaatttttatatgtttgacggttaaaaattcataattaatttatgttttgttaaaaaatt 45474755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 6223985 - 6223904
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||||| | ||| |   | ||||||||||| | |||| || ||||||||| |||||||||    
T  6223985 caaaacatgaatttaatatgaattttatatattttatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 6223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 40134129 - 40134080
Alignment:
Q  135 ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||| || ||||||||||| |||||| || |||||||||    
T  40134129 ttttatgtttttgacgcttaaaaattcatatttaatttatattttgttaa 40134080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 48911019 - 48911096
Alignment:
Q  118 catgaattaaatatgaatttta-tgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| | ||||||    ||||||||||||| |||||| ||  |||||||| |||||||||    
T  48911019 catgaattaaatatgaattttaatatttttggaggtgaaaaattcatatttaatttatgctttgttaaaaaattctaa 48911096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 26256998 - 26256926
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||| |||||||||||||||| |||||| |||| |||| | ||||||||||| |||||| || |||| ||||    
T  26256998 caaaatatgaattaaatatgaaattttatattttcgacagttaaaaattcatatttaatttatgttttattaa 26256926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 26859569 - 26859613
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||||||| | ||||||| ||||||||| |||||||||||||    
T  26859569 aaaaattcatattaaattcatgttttgttaaaaaattctaacttt 26859613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 31401457 - 31401517
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattc 172  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||||||||||| |||||||    
T  31401457 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattc 31401517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 33804931 - 33805002
Alignment:
Q  155 aaaattcatacttaattcatcttttgttaagaaattctaact--ttgtgaaagatattattataatattcta 224  Q
    |||||| ||| ||||||||||||||||||| ||||||||| |  || || |||| ||| |||||||||||||    
T  33804931 aaaatttatatttaattcatcttttgttaaaaaattctaatttcttttggaagagattgttataatattcta 33805002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 37671629 - 37671589
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  37671629 aaaaattcatatttaattcatgttttgttaaaaaattctaa 37671589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 39176911 - 39176871
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  39176911 aaaaattcatatttaattcatgttttgttaaaaaattctaa 39176871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 40550304 - 40550264
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  40550304 aaaaattcatactaaattcatgttttgttaaaaaattctaa 40550264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 49552897 - 49552969
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| ||| |||||| ||||| | || |||| |||||| |||||||||  ||||||||    
T  49552897 caaaacatgaattaaatataaatgtttatgcttttggcgcttaaaatttcatatttaattcatgctttgttaa 49552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 52587297 - 52587369
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||| |||| | ||||||||  | ||||||||||| |||||| || |||||||||    
T  52587297 caaaacatgaatttaatatgaatttttctatttttgacggttaaaaattcatatttaatttatgttttgttaa 52587369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 22734351 - 22734270
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    |||||||||||||||||||||||||| || |||||| |  | ||||||||||| ||||||||| ||||||||| ||||||||    
T  22734351 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattcta 22734270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 7575896 - 7575979
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacact-gaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  |  ||||||||||| ||||||||| ||||||||| |||||||||    
T  7575896 caaaacatgaattaaatatgaatttttatatttttggcggtaaaaaaattcatatttaattcatgttttgttaaaaaattctaa 7575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 5524071 - 5524149
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||| ||||||||||||| |||||| |||||| |  | || |||||||| ||||||||||||||||||| |||||    
T  5524071 caaaacataaattaaatatgaacttttatatttttggcggtaaacaattcatatttaattcatcttttgttaaaaaatt 5524149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 8677925 - 8677843
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  8677925 caaaacatgaatttaatatgaatttttatattttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 8677843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 33858509 - 33858589
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    |||||||||||||||||||||||||| || | ||||    ||||||||||||| ||||||||| | ||||||| |||||||    
T  33858509 caaaacatgaattaaatatgaatttttatatgtttggaggtgaaaaattcatatttaattcatgtcttgttaaaaaattct 33858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 8440321 - 8440400
Alignment:
Q  117 acatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcat-cttttgttaagaaattctaa 194  Q
    |||||||||||||||||| |||||| |||||| |  | ||||||||||| |||||||||  ||||||||| |||||||||    
T  8440321 acatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgtttttgttaaaaaattctaa 8440400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 12462209 - 12462291
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  12462209 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 12462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 18804587 - 18804505
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||| || |||||| ||||||||  |  |||||||||| |||||| || ||||||||| |||||||||    
T  18804587 caaaacatgaatttaatattaatttttatatttttgacggttcaaaattcatatttaatttatgttttgttaaaaaattctaa 18804505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 34188042 - 34188119
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaacttt--gtgaaagatattattataatattctaaactt 229  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| |||   ||  ||||||| |||||||||| |||||||    
T  34188042 aaaaattcatatttaattcatattttgttaaaaaattctaatttttcttgggagatattcttataatattataaactt 34188119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 8037342 - 8037302
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| |||||| |||||||||||| |||||||||    
T  8037342 aaaaattcatatttaatttatcttttgttaaaaaattctaa 8037302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 10402103 - 10402063
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| |||||||||||||| |||| |||||||||    
T  10402103 aaaaattcatatttaattcatcttttattaaaaaattctaa 10402063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 10686089 - 10686165
Alignment:
Q  115 aaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||| |||||| ||||||  | | || |||||||| |||||| || ||||||||| |||||    
T  10686089 aaacatgaattaaatatgaatttttatatttttggtagttaataattcatatttaatttatgttttgttaaaaaatt 10686165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 17545135 - 17545175
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  17545135 aaaaattcatatttaattcatgttttgttaaaaaattctaa 17545175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 3429 - 3508
Alignment:
Q  111 atcaaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaat 189  Q
    |||||||||||||||||||||||| |||||| |||||| |  | ||||||||||| ||||||||| ||||||||| ||||    
T  3429 atcaaaacatgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaat 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 34403011 - 34402932
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattc 191  Q
    |||||||||||||||||||||| |||||| ||||||||  | ||||||||||| ||||||||| |||| |||| ||||||    
T  34403011 caaaacatgaattaaatatgaatttttatatttttgacggtaaaaaattcatatttaattcatgttttattaaaaaattc 34402932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 36491712 - 36491779
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatctttt 179  Q
    ||||||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||| ||||    
T  36491712 caaaacatgaattaaatataaatttttatgattttgacactaaaaaattcatatttaattcatgtttt 36491779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 14254618 - 14254697
Alignment:
Q  116 aacatgaattaaatatgaattt-tatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| ||| ||||| ||  | ||||||||||| ||||||||| |||| |||| |||||||||    
T  14254618 aacatgaattaaatatgaatttatatattttttacggtaaaaaattcatatttaattcatgttttattaaaaaattctaa 14254697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 22422677 - 22422594
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaac 195  Q
    ||||||||||||| |||||||||||| || |||||||   | ||||||||||| |||||| || ||||||||| ||||||||||    
T  22422677 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatatttaatttatattttgttaaaaaattctaac 22422594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 38348650 - 38348729
Alignment:
Q  116 aacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||| |||||||| |||||| |||||||| || ||||||||||| ||||||  | ||||||||| |||||||||    
T  38348650 aacatgaatttaatatgaaattttatatttttgacgcttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 38348729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 19037581 - 19037659
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    ||||||||||||| |||||||||||| || ||||||||  | ||||||||||| |||||| || ||||||||| |||||    
T  19037581 caaaacatgaatttaatatgaatttttatatttttgacggtaaaaaattcatatttaatttatgttttgttaaaaaatt 19037659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 48736346 - 48736264
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || || ||  || | ||||||||||| |||||| || ||||||||| |||||||||    
T  48736346 caaaacatgaattaaatatgaatttttatattatttgcagtaaaaaattcatatttaatttatgttttgttaaaaaattctaa 48736264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 52960270 - 52960356
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaacttt 198  Q
    ||||||| |||||||||||||||||| || ||||||    | ||||||||||| ||||||||| ||||||||| | |||||||||||    
T  52960270 caaaacaagaattaaatatgaatttttatatttttggtggttaaaaattcatatttaattcatattttgttaaaatattctaacttt 52960356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 5092821 - 5092741
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    |||||||||||||||||||||||||| || |||||  |  | ||||||||||| |||||| || ||||||||| |||||||    
T  5092821 caaaacatgaattaaatatgaatttttatattttttgcggtaaaaaattcatatttaattaatgttttgttaaaaaattct 5092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 27979803 - 27979914
Alignment:
Q  113 caaaacatgaattaaatatgaatt-ttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatatta 211  Q
    ||||||||| ||||||| |||||| |||| |||||| || | ||||||||||| |||||| ||  |||||||| ||||||||| ||| ||  |||||||     
T  27979803 caaaacatggattaaatttgaattattatatttttg-cagttaaaaattcatatttaatttataatttgttaaaaaattctaattttttgggagatattt 27979901  T
Q  212 ttataatattcta 224  Q
    ||| |||||||||    
T  27979902 ttacaatattcta 27979914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 42916643 - 42916571
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||| ||||||||||||||||| || ||||||||  | ||||||||||| |||||| || |||||||||    
T  42916643 caaaacattaattaaatatgaatttttatatttttgacggtaaaaaattcatatttaatttatgttttgttaa 42916571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 54441800 - 54441752
Alignment:
Q  117 acatgaattaaatatgaatttt-atgtttttgacactgaaaaattcata 164  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  54441800 acatgaactaaatatgaatttttatgtttttgacacttaaaaattcata 54441752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 4415696 - 4415775
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattc 191  Q
    ||||||||||||| ||||||||| ||||| ||||| | | | ||||||||||| |||||| || ||||||||| ||||||    
T  4415696 caaaacatgaatttaatatgaatctttatattttttatagttaaaaattcatatttaatttatattttgttaaaaaattc 4415775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 7744558 - 7744625
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagatattattataatatt 221  Q
    ||||||||||| ||||||||| ||||||||| ||||||||  ||| ||  ||||||| ||||||||||    
T  7744558 aaaaattcatatttaattcatgttttgttaacaaattctatttttttgggagatattcttataatatt 7744625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 25810773 - 25810824
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcata 164  Q
    |||||||||||||||||||||||||||| |||||||   | |||||||||||    
T  25810773 caaaacatgaattaaatatgaattttatatttttgaaggttaaaaattcata 25810824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 52439121 - 52439050
Alignment:
Q  114 aaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||||| |||||| |||||| |  | ||||||| ||| ||||||||| |||||||||    
T  52439121 aaaacatgaattaaatatgaatttttatatttttggcggttaaaaatttatatttaattcatgttttgttaa 52439050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 2904819 - 2904901
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  2904819 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 2904901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 4116089 - 4116007
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  4116089 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttttgttttgttaaaaaattctaa 4116007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 8080295 - 8080377
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||  || ||||||| ||| | |||| || ||||||||| |||||||||    
T  8080295 caaaacatgaatttaatatgaatttttatatttttgattcttaaaaatttatattaaatttatgttttgttaaaaaattctaa 8080377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 13428071 - 13428153
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  13428071 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 13428153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 16078508 - 16078426
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||| |||||| || |||||  |  | ||||||||||| ||||||||| ||||||||| | |||||||    
T  16078508 caaaacatgaattaaatataaatttttatatttttagcgataaaaaattcatatttaattcatgttttgttaaaacattctaa 16078426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 25108608 - 25108526
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || ||||| |   | ||||||||||| |||||| || ||||||||| |||||||||    
T  25108608 caaaacatgaatttaatatgaatttttatattttttatggttaaaaattcataattaatttatgttttgttaaaaaattctaa 25108526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 27285279 - 27285361
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  27285279 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 27285361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 29097295 - 29097377
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||| || |||||| ||||||||  | ||||||| ||| |||||| || ||||||||| |||||||||    
T  29097295 caaaacatgaatttaatattaatttttatatttttgacggttaaaaattaataattaatttatgttttgttaaaaaattctaa 29097377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 36703688 - 36703606
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| |||||||   | ||||||||||| | |||| || ||||||||| |||||||||    
T  36703688 caaaacatgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttatgttttgttaaaaaattctaa 36703606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 47805182 - 47805264
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | |||||   | ||||||||||| |||||| || ||||||||| |||||||||    
T  47805182 caaaacatgaatttaatatgaatttttatatgtttgatggttaaaaattcataattaatttatgttttgttaacaaattctaa 47805264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 45756530 - 45756611
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattcta 193  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| |||||| || |||||||||  |||||||    
T  45756530 caaaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttatgttttgttaaagaattcta 45756611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 46959258 - 46959339
Alignment:
Q  114 aaaacatgaattaaatatgaattttatgtttttga-cactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| |||||| |||||||   |||||| |||| ||||||||||| |||||| || |||| |||| |||||||||    
T  46959258 aaaacatgaatgaaatataaattttaatattttgaacacttaaaaattcatatttaattaatattttattaaaaaattctaa 46959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 50683359 - 50683392
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgttttt 146  Q
    |||||||||||||||||||||||||||| |||||    
T  50683359 caaaacatgaattaaatatgaattttatattttt 50683392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 29146063 - 29146023
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  29146063 aaaaattcatatttaattcatgttttgttaaaaaattctaa 29146023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 29771817 - 29771737
Alignment:
Q  115 aaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| |||||||||||| || ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  29771817 aaacatgaatttaatatgaatttttatattttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 29771737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 39652443 - 39652403
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  39652443 aaaaattcatacttaattcatgttttggtaaaaaattctaa 39652403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 49333702 - 49333634
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttg 180  Q
    |||||||||||||||||||||| |||||| |||||  || | ||||||||||| |||||| || |||||    
T  49333702 caaaacatgaattaaatatgaatttttatatttttagcagttaaaaattcatatttaatttatgttttg 49333634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 12611955 - 12611873
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| ||||||||| |||||||||    
T  12611955 caaaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaaaaaattctaa 12611873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 3021447 - 3021364
Alignment:
Q  113 caaaacatgaattaaatatgaa--ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||  |||||| |||||| |  | ||||| ||||| ||||||||| ||||||||| |||||||||    
T  3021447 caaaacatgaattaaatatgaattttttatatttttggcggtaaaaaaatcatatttaattcatgttttgttaaaaaattctaa 3021364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 26062303 - 26062377
Alignment:
Q  117 acatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaat 189  Q
    ||||||||||||||||||||||  || ||||||||  | ||||||||||| ||||||||| ||||||||| ||||    
T  26062303 acatgaattaaatatgaattttttatatttttgacggttaaaaattcatatttaattcatgttttgttaaaaaat 26062377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 26068042 - 26068116
Alignment:
Q  117 acatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaat 189  Q
    ||||||||||||||||||||||  || ||||||||  | ||||||||||| ||||||||| ||||||||| ||||    
T  26068042 acatgaattaaatatgaattttttatatttttgacggttaaaaattcatatttaattcatgttttgttaaaaaat 26068116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 1378957 - 1379039
Alignment:
Q  113 caaaacatgaattaaatatgaat-tttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||||||| ||||| | ||||    | ||||||||||| ||||||||| ||||||||| |||||||||    
T  1378957 caaaacatgaattaaatatgaatctttatatatttggaggtaaaaaattcatatttaattcatgttttgttaaaaaattctaa 1379039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 8811338 - 8811256
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| || ||||||    | ||||||||||| |||||| || ||||||||| |||||||||    
T  8811338 caaaacatgaattaaatatgaatttttatatttttggaggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 8811256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 16064753 - 16064671
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||||||||| || |||||| |||||| | || || |||| ||| ||||||||| ||||||||| |||||||||    
T  16064753 caaaacatgaattaaatataaatttttatatttttggcgctaaacaatttatatttaattcatgttttgttaaaaaattctaa 16064671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 16403337 - 16403271
Alignment:
Q  119 atgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| || |||||||||||||  ||| ||||||||||| ||||||||| |||||||||    
T  16403337 atgaattaaatattaacttttatgtttttggaacttaaaaattcatatttaattcattttttgttaa 16403271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 45134035 - 45133958
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaatt 190  Q
    |||||||||||||||||||||| |||||| ||||||||  | ||||||||||| ||||||||| | ||||||| |||||    
T  45134035 caaaacatgaattaaatatgaatttttatatttttgacggt-aaaaattcatatttaattcatgtattgttaaaaaatt 45133958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 31900976 - 31900895
Alignment:
Q  114 aaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||| |||||||||||| || | ||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  31900976 aaaacatgaatttaatatgaatttttatatgtttgacggttaaaaattcataattaatttatgttttgttaaaaaattctaa 31900895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 39120369 - 39120288
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||||| | ||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  39120369 caaaacatgaatttaatatgaattttatatgttttacggttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 39120288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 2630086 - 2630168
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||| ||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  2630086 caaaacatgaatttaatatgaatttttatatgtttaacggtaaaaaattcataattaatttatgttttgttaaaaaattctaa 2630168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 5612637 - 5612719
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| ||||| ||  | ||||||||||| ||||||  | ||||||||| |||||||||    
T  5612637 caaaacatgaatttaatatgaatttttatattttttacggtaaaaaattcatatttaatttgtgttttgttaaaaaattctaa 5612719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 36741661 - 36741743
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||||||| || | ||| ||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  36741661 caaaacatgaatttaatatgaatttttatatgttttacggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 36741743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 40073558 - 40073477
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||||||||||||||||||||||| |  |||||| || | ||||||||||| |||||| |  ||||||||| |||||||||    
T  40073558 caaaacatgaattaaatatgaatttttacatttttg-cagttaaaaattcatatttaatttaagttttgttaaaaaattctaa 40073477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 43942931 - 43943013
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||| ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  43942931 caaaacatgaatttaatatgaatttttatatcttttacagttaaaaattcatatttaatttgtgttttgttaaaaaattctaa 43943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 44159723 - 44159641
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| | ||||||  | ||| ||||||| |||||| || ||||||||| |||||||||    
T  44159723 caaaacatgaatttaatatgaatttttatatgtttgacggttaaatattcataattaatttatgttttgttaaaaaattctaa 44159641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 44537642 - 44537712
Alignment:
Q  115 aaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    |||||||||||||||||||| |||||| |||||| |  | ||| ||||||| ||||||||| |||||||||    
T  44537642 aaacatgaattaaatatgaatttttatatttttggctgtaaaatattcatatttaattcatgttttgttaa 44537712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 31666088 - 31666035
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaactttgtgaaagat 207  Q
    ||||||||||| | ||||||||||||||||| ||||||||  ||| ||||||||    
T  31666088 aaaaattcatattaaattcatcttttgttaaaaaattctatttttttgaaagat 31666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 37342597 - 37342630
Alignment:
Q  113 caaaacatgaattaaatatgaattttatgttttt 146  Q
    |||||||||||||||||||||||||||| |||||    
T  37342597 caaaacatgaattaaatatgaattttatattttt 37342630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 5475584 - 5475512
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||| |||||||| |||||| ||||||||  | ||||||||||| || ||| || |||||||||    
T  5475584 caaaacatgaatttaatatgaatttttatatttttgacggttaaaaattcatatttgatttatattttgttaa 5475512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 12565700 - 12565660
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  12565700 aaaaattcatattaaattcatcttttgttaaaaaattctaa 12565660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 13242887 - 13242927
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    |||||| |||| ||||||||| |||||||||||||||||||    
T  13242887 aaaaatacatatttaattcatgttttgttaagaaattctaa 13242927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 18381469 - 18381509
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  18381469 aaaaattcatatttaattcatgttttgttaaaaaattctaa 18381509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 26401142 - 26401071
Alignment:
Q  113 caaaacatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgtt 182  Q
    |||||||||| |||||||||||||||   | |||||| || | |||||||||||| |||||||| |||||||    
T  26401142 caaaacatgagttaaatatgaatttttactttttttggcaattaaaaattcatacgtaattcatgttttgtt 26401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 32901744 - 32901661
Alignment:
Q  113 caaaacatgaattaaatatgaatttt--atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| ||||| | ||||  || ||||||||  | ||||||||||| |||||| || ||||||||| |||||||||    
T  32901744 caaaacatgaattgaatataattttttaatatttttgacggttaaaaattcatatttaatttatgttttgttaaaaaattctaa 32901661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 39691 - 39580
Alignment:
Q  113 caaaacatgaattaaatatg-aattttatgtttttgacactgaaaaattcatacttaattcatcttttgtt-aagaaattctaactttgt-gaaagatat 209  Q
    |||||||||||||||||||| || ||||| ||||||||  | ||||||| ||| ||||||||| ||||||| || ||||||||| ||| | |||||||||    
T  39691 caaaacatgaattaaatatgaaaatttatatttttgaccattaaaaatttatatttaattcatgttttgttaaaaaaattctaattttttggaaagatat 39592  T
Q  210 tattataatatt 221  Q
    | | ||||||||    
T  39591 tttaataatatt 39580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 11087 - 11018
Alignment:
Q  116 aacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaa 184  Q
    ||||||||||||||||||| |||||| ||||| ||| | ||||||||||| |||||| || |||||||||    
T  11087 aacatgaattaaatatgaatttttatattttttacagttaaaaattcatatttaatttatgttttgttaa 11018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 40572 - 40660
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaactttgt 200  Q
    ||||||||||||| |||||||||||| || |||||||   | ||||||||||| ||||||  | ||||||||| ||||||||| |||||    
T  40572 caaaacatgaatttaatatgaatttttatatttttgaaggttaaaaattcatatttaatttttattttgttaaaaaattctaattttgt 40660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 1002 - 920
Alignment:
Q  113 caaaacatgaattaaatatgaa-ttttatgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||||| |||||||| |||||| || || ||| | ||||||||||| ||||||  | ||||||||| |||||||||    
T  1002 caaaacatgaatttaatatgaatttttatattatttacagttaaaaattcatatttaatttgtattttgttaaaaaattctaa 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 893 - 825
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa-ctttgtgaaagatattattataatatt 221  Q
    ||||||||||| | ||||||| ||||||||| |||||||||  ||| | ||||||||| ||||||||||    
T  893 aaaaattcatattaaattcatgttttgttaaaaaattctaattttttttaaagatattcttataatatt 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 17899 - 17979
Alignment:
Q  113 caaaacatgaattaaatatgaatttt-atgtttttgacactgaaaaattcatacttaattcatcttttgttaagaaattct 192  Q
    ||||||||||||||||||| |||||| || ||||| |   | ||||||||||| |||||| || ||||||||| |||||||    
T  17899 caaaacatgaattaaatatcaatttttatattttttatggtaaaaaattcatatttaatttatgttttgttaaaaaattct 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 34587 - 34627
Alignment:
Q  154 aaaaattcatacttaattcatcttttgttaagaaattctaa 194  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  34587 aaaaattcatatttaattcatgttttgttaaaaaattctaa 34627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University