View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9290_low_38 (Length: 353)

Name: NF9290_low_38
Description: NF9290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9290_low_38
NF9290_low_38
[»] chr3 (47 HSPs)
chr3 (5-335)||(290880-291211)
chr3 (18-59)||(41587298-41587339)
chr3 (20-59)||(3090407-3090446)
chr3 (20-59)||(17764951-17764990)
chr3 (20-59)||(19066271-19066310)
chr3 (21-59)||(18364678-18364716)
chr3 (21-59)||(23682039-23682077)
chr3 (21-59)||(24054276-24054314)
chr3 (20-62)||(53490720-53490762)
chr3 (22-59)||(54605810-54605847)
chr3 (20-59)||(11345348-11345387)
chr3 (20-59)||(40036385-40036424)
chr3 (20-59)||(54403607-54403646)
chr3 (21-59)||(9830322-9830360)
chr3 (21-59)||(13623223-13623261)
chr3 (18-59)||(40928151-40928192)
chr3 (22-59)||(49765120-49765157)
chr3 (20-59)||(1262445-1262484)
chr3 (28-59)||(3089798-3089829)
chr3 (28-59)||(5963105-5963136)
chr3 (219-262)||(8354509-8354552)
chr3 (20-59)||(11397635-11397674)
chr3 (28-59)||(11581884-11581915)
chr3 (28-59)||(18365278-18365309)
chr3 (20-59)||(27255333-27255372)
chr3 (20-59)||(27394299-27394338)
chr3 (28-59)||(40927541-40927572)
chr3 (20-59)||(44500032-44500071)
chr3 (28-59)||(49080606-49080637)
chr3 (28-58)||(1364049-1364079)
chr3 (20-62)||(3541073-3541115)
chr3 (28-62)||(20612106-20612140)
chr3 (25-59)||(40974692-40974726)
chr3 (28-58)||(54606421-54606451)
chr3 (18-59)||(20030565-20030606)
chr3 (20-57)||(44950359-44950396)
chr3 (18-58)||(47794638-47794679)
chr3 (18-59)||(53329379-53329420)
chr3 (18-59)||(53333057-53333098)
chr3 (21-57)||(809755-809791)
chr3 (31-59)||(2756607-2756635)
chr3 (23-59)||(25259286-25259322)
chr3 (26-62)||(30604720-30604756)
chr3 (20-56)||(32255099-32255135)
chr3 (28-60)||(45307355-45307387)
chr3 (20-59)||(49080007-49080044)
chr3 (18-54)||(53336745-53336781)
[»] chr2 (43 HSPs)
chr2 (93-335)||(24525913-24526165)
chr2 (93-335)||(24532584-24532836)
chr2 (20-62)||(6229874-6229916)
chr2 (20-59)||(33146080-33146119)
chr2 (20-59)||(37009649-37009688)
chr2 (20-59)||(37199589-37199628)
chr2 (21-58)||(37329746-37329783)
chr2 (21-65)||(11052219-11052263)
chr2 (20-59)||(3515462-3515501)
chr2 (20-59)||(11564458-11564497)
chr2 (20-59)||(31597270-31597309)
chr2 (20-59)||(34173703-34173742)
chr2 (20-62)||(3045588-3045630)
chr2 (20-62)||(7939369-7939411)
chr2 (20-62)||(28167582-28167624)
chr2 (20-58)||(40769359-40769397)
chr2 (28-65)||(37198963-37199000)
chr2 (21-58)||(43439789-43439826)
chr2 (26-59)||(44332378-44332411)
chr2 (28-64)||(17829091-17829127)
chr2 (20-59)||(4437968-4438007)
chr2 (28-59)||(5474669-5474700)
chr2 (28-59)||(10357118-10357149)
chr2 (28-59)||(15006475-15006506)
chr2 (20-59)||(31709112-31709151)
chr2 (28-59)||(33146700-33146731)
chr2 (28-59)||(34173091-34173122)
chr2 (28-59)||(35175667-35175698)
chr2 (28-59)||(41521665-41521696)
chr2 (28-62)||(3514845-3514879)
chr2 (10-56)||(17449769-17449815)
chr2 (21-59)||(22298241-22298279)
chr2 (28-57)||(11051606-11051635)
chr2 (29-58)||(13873362-13873391)
chr2 (29-58)||(14013487-14013516)
chr2 (29-62)||(31363936-31363969)
chr2 (21-62)||(32235937-32235978)
chr2 (21-62)||(32875199-32875240)
chr2 (20-57)||(33476546-33476583)
chr2 (28-57)||(41078156-41078185)
chr2 (21-57)||(13873976-13874012)
chr2 (21-57)||(14014101-14014137)
chr2 (21-57)||(26196254-26196290)
[»] scaffold0189 (1 HSPs)
scaffold0189 (20-59)||(11335-11374)
[»] scaffold0068 (1 HSPs)
scaffold0068 (20-59)||(59306-59345)
[»] scaffold0003 (3 HSPs)
scaffold0003 (20-59)||(14712-14751)
scaffold0003 (20-59)||(28858-28897)
scaffold0003 (20-59)||(421193-421232)
[»] chr8 (38 HSPs)
chr8 (20-59)||(17564716-17564755)
chr8 (18-59)||(14094138-14094179)
chr8 (20-57)||(34925395-34925432)
chr8 (21-61)||(44746220-44746260)
chr8 (20-59)||(253571-253610)
chr8 (20-59)||(662248-662287)
chr8 (20-59)||(848046-848085)
chr8 (20-59)||(31740139-31740178)
chr8 (20-59)||(37266132-37266171)
chr8 (20-59)||(40791094-40791133)
chr8 (20-58)||(12336282-12336320)
chr8 (20-62)||(17734901-17734943)
chr8 (21-54)||(13439478-13439511)
chr8 (21-57)||(11141052-11141088)
chr8 (21-64)||(8438558-8438601)
chr8 (28-59)||(11140142-11140173)
chr8 (28-59)||(31739557-31739588)
chr8 (21-60)||(33972961-33973000)
chr8 (20-59)||(37872857-37872896)
chr8 (21-56)||(42166069-42166104)
chr8 (20-58)||(8443315-8443353)
chr8 (28-58)||(13421490-13421520)
chr8 (29-59)||(13422065-13422095)
chr8 (21-59)||(24809631-24809669)
chr8 (20-54)||(30354517-30354551)
chr8 (20-54)||(37836972-37837006)
chr8 (21-59)||(44284341-44284379)
chr8 (21-58)||(3075957-3075994)
chr8 (28-57)||(8437947-8437976)
chr8 (20-57)||(30056337-30056374)
chr8 (28-57)||(34923891-34923920)
chr8 (20-57)||(36016750-36016786)
chr8 (30-59)||(40791755-40791784)
chr8 (26-59)||(41312376-41312409)
chr8 (31-59)||(31846495-31846523)
chr8 (20-56)||(34678646-34678682)
chr8 (20-56)||(40299577-40299613)
chr8 (30-58)||(44746839-44746867)
[»] chr7 (40 HSPs)
chr7 (20-59)||(16425999-16426038)
chr7 (20-59)||(20261571-20261610)
chr7 (21-58)||(28308661-28308698)
chr7 (20-57)||(48872059-48872096)
chr7 (20-64)||(3391798-3391842)
chr7 (20-56)||(31221445-31221481)
chr7 (20-59)||(12677145-12677184)
chr7 (20-59)||(40401541-40401580)
chr7 (20-62)||(46011109-46011151)
chr7 (20-60)||(5227897-5227937)
chr7 (20-60)||(32387525-32387565)
chr7 (20-59)||(1573743-1573782)
chr7 (20-59)||(11639942-11639981)
chr7 (20-59)||(12679040-12679079)
chr7 (21-56)||(13068397-13068432)
chr7 (28-59)||(14078402-14078433)
chr7 (28-59)||(14388430-14388461)
chr7 (20-59)||(22711680-22711719)
chr7 (28-59)||(27144227-27144258)
chr7 (20-59)||(27619623-27619662)
chr7 (20-59)||(29615562-29615601)
chr7 (28-59)||(32867900-32867931)
chr7 (28-59)||(34999231-34999262)
chr7 (20-59)||(36688849-36688888)
chr7 (28-59)||(36847878-36847909)
chr7 (20-59)||(38987798-38987837)
chr7 (28-59)||(48982536-48982567)
chr7 (21-59)||(2790126-2790164)
chr7 (21-59)||(8123267-8123305)
chr7 (20-62)||(26200467-26200509)
chr7 (10-64)||(29736172-29736226)
chr7 (21-59)||(30869954-30869992)
chr7 (21-59)||(32867290-32867328)
chr7 (28-58)||(33869240-33869270)
chr7 (28-62)||(40343801-40343835)
chr7 (20-62)||(42813065-42813107)
chr7 (26-59)||(22264432-22264465)
chr7 (29-62)||(29103564-29103597)
chr7 (20-57)||(33576681-33576718)
chr7 (28-64)||(32388145-32388181)
[»] chr6 (25 HSPs)
chr6 (20-59)||(21802594-21802633)
chr6 (20-57)||(15499486-15499523)
chr6 (20-59)||(2522714-2522753)
chr6 (20-59)||(22342143-22342182)
chr6 (21-59)||(10702925-10702963)
chr6 (21-59)||(12767597-12767635)
chr6 (20-58)||(31282235-31282273)
chr6 (20-58)||(32114397-32114435)
chr6 (26-59)||(22022270-22022303)
chr6 (20-56)||(22342236-22342272)
chr6 (28-59)||(4100560-4100591)
chr6 (20-59)||(4101114-4101153)
chr6 (28-59)||(4125922-4125953)
chr6 (20-59)||(4126477-4126516)
chr6 (28-59)||(10702316-10702347)
chr6 (28-59)||(12026195-12026226)
chr6 (20-59)||(14306837-14306876)
chr6 (20-59)||(30461486-30461525)
chr6 (28-59)||(32113784-32113815)
chr6 (20-58)||(6937894-6937932)
chr6 (28-58)||(12693892-12693922)
chr6 (21-59)||(14313237-14313275)
chr6 (30-59)||(7448890-7448919)
chr6 (34-62)||(17307248-17307276)
chr6 (28-56)||(21801987-21802015)
[»] chr4 (43 HSPs)
chr4 (20-59)||(13482229-13482268)
chr4 (18-59)||(48372461-48372502)
chr4 (18-54)||(36898087-36898123)
chr4 (20-59)||(7479336-7479375)
chr4 (20-59)||(35667371-35667410)
chr4 (20-59)||(51019697-51019736)
chr4 (20-59)||(55068889-55068928)
chr4 (21-59)||(19313391-19313429)
chr4 (21-59)||(23722042-23722080)
chr4 (21-59)||(37147785-37147823)
chr4 (21-58)||(8138369-8138406)
chr4 (22-59)||(37424438-37424475)
chr4 (18-59)||(54096703-54096744)
chr4 (20-56)||(7797603-7797639)
chr4 (20-64)||(32448930-32448974)
chr4 (20-59)||(721969-722008)
chr4 (20-59)||(754914-754953)
chr4 (28-59)||(16960251-16960282)
chr4 (28-59)||(17722796-17722827)
chr4 (20-59)||(18362687-18362726)
chr4 (20-59)||(25010047-25010086)
chr4 (28-59)||(35667281-35667312)
chr4 (28-59)||(35667564-35667595)
chr4 (20-59)||(35853604-35853643)
chr4 (20-59)||(36600200-36600239)
chr4 (28-59)||(37708821-37708852)
chr4 (29-59)||(13771764-13771794)
chr4 (21-59)||(20545009-20545047)
chr4 (21-59)||(26705080-26705118)
chr4 (21-59)||(44664752-44664790)
chr4 (21-58)||(7852313-7852350)
chr4 (21-58)||(16960865-16960902)
chr4 (21-54)||(17730171-17730204)
chr4 (20-57)||(21037346-21037383)
chr4 (28-57)||(26705667-26705696)
chr4 (20-57)||(35666000-35666037)
chr4 (20-57)||(51268539-51268576)
chr4 (21-58)||(53305722-53305759)
chr4 (18-59)||(54092826-54092867)
chr4 (20-57)||(55814987-55815024)
chr4 (21-57)||(4949982-4950018)
chr4 (28-56)||(4950593-4950621)
chr4 (25-57)||(16192310-16192342)
[»] chr1 (28 HSPs)
chr1 (20-59)||(16536417-16536456)
chr1 (20-57)||(17109352-17109389)
chr1 (20-59)||(27225721-27225760)
chr1 (28-62)||(29510476-29510510)
chr1 (20-62)||(36604769-36604811)
chr1 (28-62)||(45195236-45195270)
chr1 (21-59)||(45737350-45737388)
chr1 (21-59)||(50143430-50143468)
chr1 (26-59)||(9997994-9998027)
chr1 (21-58)||(31765380-31765417)
chr1 (18-59)||(41575830-41575871)
chr1 (20-57)||(42831191-42831228)
chr1 (23-59)||(10012444-10012480)
chr1 (21-57)||(18406577-18406613)
chr1 (18-62)||(47292228-47292272)
chr1 (20-59)||(2275134-2275173)
chr1 (20-59)||(28970876-28970915)
chr1 (20-59)||(45738045-45738084)
chr1 (29-59)||(794746-794776)
chr1 (20-58)||(4667532-4667570)
chr1 (20-62)||(13573541-13573583)
chr1 (21-59)||(28198114-28198152)
chr1 (28-62)||(41575216-41575250)
chr1 (20-58)||(45559754-45559792)
chr1 (18-59)||(43504446-43504487)
chr1 (20-56)||(33126843-33126879)
chr1 (10-58)||(44648666-44648714)
chr1 (20-56)||(47233108-47233144)
[»] chr5 (30 HSPs)
chr5 (20-62)||(8573338-8573380)
chr5 (20-59)||(14594115-14594154)
chr5 (20-59)||(20259993-20260032)
chr5 (20-59)||(27979277-27979316)
chr5 (21-59)||(20570204-20570242)
chr5 (21-59)||(36737439-36737477)
chr5 (21-59)||(36742167-36742205)
chr5 (21-54)||(36853669-36853702)
chr5 (28-59)||(4877372-4877403)
chr5 (20-59)||(12585654-12585693)
chr5 (219-262)||(14460511-14460554)
chr5 (28-59)||(19408585-19408616)
chr5 (28-59)||(35751562-35751593)
chr5 (28-59)||(36742579-36742610)
chr5 (20-59)||(36762160-36762199)
chr5 (28-62)||(1199742-1199776)
chr5 (21-59)||(4876756-4876794)
chr5 (21-59)||(5138955-5138993)
chr5 (21-59)||(20184004-20184042)
chr5 (20-57)||(141608-141645)
chr5 (21-58)||(1406226-1406263)
chr5 (20-57)||(10687636-10687673)
chr5 (28-57)||(20570176-20570205)
chr5 (21-58)||(21639678-21639715)
chr5 (28-57)||(27979897-27979926)
chr5 (18-58)||(8007714-8007754)
chr5 (20-56)||(19500815-19500851)
chr5 (28-64)||(21639059-21639095)
chr5 (20-56)||(22731049-22731085)
chr5 (18-58)||(40026975-40027015)
[»] scaffold0695 (1 HSPs)
scaffold0695 (18-59)||(2269-2310)
[»] scaffold0361 (1 HSPs)
scaffold0361 (21-59)||(17139-17177)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-62)||(185174-185216)
[»] scaffold0368 (1 HSPs)
scaffold0368 (20-57)||(11247-11284)
[»] scaffold0971 (1 HSPs)
scaffold0971 (20-52)||(3152-3184)
[»] scaffold0289 (1 HSPs)
scaffold0289 (28-59)||(3454-3485)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-59)||(11619-11658)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-59)||(100049-100088)
[»] scaffold0006 (1 HSPs)
scaffold0006 (24-59)||(161303-161338)
[»] scaffold1192 (1 HSPs)
scaffold1192 (21-58)||(815-852)
[»] scaffold0115 (1 HSPs)
scaffold0115 (26-59)||(31349-31382)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-57)||(26401-26437)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-62)||(351311-351352)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-56)||(25955-25991)


Alignment Details
Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 5 - 335
Target Start/End: Complemental strand, 291211 - 290880
Alignment:
Q  5 ggtgggtagattattcttttcaagggaggggagtgtatattttaacataagagggaagtgtgtattttcatccgtcggtannnnnnnncttcagaaatca 104  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||    
T  291211 ggtgtgtaaatttttcttttcaagggaggggagtgtatattttaacataagagggaagtgtgtattttcatccgtcggtattttttt-ctttagaaatca 291113  T
Q  105 tggaactcgacaatcaaattgaaaattatatcatggatgctcattatttatggttacttttataatttgatgggattagcgattgttaaataaagttgag 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  291112 tggaactcgacaatcaaattgaaaattatatcatggatgctcattatttatggttacttttataatttgatgggattagtgatcgttaaataaagttgag 291013  T
Q  205 agaaactagacagaatattgcttatccaatgatgcacttacttttgaagttagcattattgttgcgtgt--cgagtgcaaatgatgaaagaagttagaaa 302  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  291012 agaaactagatagaatattgcttatccaatgatgcacttacttttgaagctagcattattattgcgtgtggcgagtgcaaatgaagaaagaagttagaaa 290913  T
Q  303 ctttatggatagtcaaatgggcaaccacatgga 335  Q
    ||||||||||||||||||||| |||||||||||    
T  290912 ctttatggatagtcaaatgggaaaccacatgga 290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41587298 - 41587339
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41587298 ttcttttcaagggaggggagtgtatattttaacataagaggg 41587339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 3090407 - 3090446
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3090407 cttttcaagggaggggagtgtatattttaacataagaggg 3090446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 17764951 - 17764990
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17764951 cttttcaagggaggggagtgtatattttaacataagaggg 17764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 19066271 - 19066310
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19066271 cttttcaagggaggggagtgtatattttaacataagaggg 19066310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 18364716 - 18364678
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18364716 ttttcaagggaggggagtgtatattttaacataagaggg 18364678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 23682077 - 23682039
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23682077 ttttcaagggaggggagtgtatattttaacataagaggg 23682039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 24054314 - 24054276
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24054314 ttttcaagggaggggagtgtatattttaacataagaggg 24054276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 53490720 - 53490762
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  53490720 cttttcaagggaggggagtgtatattttaacataagagagaag 53490762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 54605847 - 54605810
Alignment:
Q  22 tttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54605847 tttcaagggaggggagtgtatattttaacataagaggg 54605810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 11345348 - 11345387
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  11345348 ctttacaagggaggggagtgtatattttaacataagaggg 11345387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 40036385 - 40036424
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  40036385 ctttgcaagggaggggagtgtatattttaacataagaggg 40036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 54403646 - 54403607
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  54403646 cttttcaagggagggaagtgtatattttaacataagaggg 54403607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 9830360 - 9830322
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  9830360 ttttcaagggaggggagtgtatattttaacttaagaggg 9830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 13623261 - 13623223
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13623261 ttttcaagggagggaagtgtatattttaacataagaggg 13623223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 40928151 - 40928192
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  40928151 ttcttttcaatggagggaagtgtatattttaacataagaggg 40928192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 49765120 - 49765157
Alignment:
Q  22 tttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  49765120 tttcaagggaggggaatgtatattttaacataagaggg 49765157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 1262484 - 1262445
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  1262484 cttttcaagagaggagagtgtatattttaacataagaggg 1262445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 3089829 - 3089798
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  3089829 gggaggggagtgtatattttaacataagaggg 3089798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 5963136 - 5963105
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  5963136 gggaggggagtgtatattttaacataagaggg 5963105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 8354552 - 8354509
Alignment:
Q  219 atattgcttatccaatgatgcacttacttttgaagttagcatta 262  Q
    ||||||||||||||||| || | |||||||||||||||||||||    
T  8354552 atattgcttatccaatggtgtatttacttttgaagttagcatta 8354509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 11397674 - 11397635
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  11397674 cttttcaagggatgagagtgtatattttaacataagaggg 11397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 11581915 - 11581884
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  11581915 gggaggggagtgtatattttaacataagaggg 11581884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 18365278 - 18365309
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  18365278 gggaggggagtgtatattttaacataagaggg 18365309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27255372 - 27255333
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  27255372 cttttcaagggagatgagtgtatattttaacataagaggg 27255333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27394338 - 27394299
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  27394338 ctttttaagggaggggaatgtatattttaacataagaggg 27394299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 40927572 - 40927541
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  40927572 gggaggggagtgtatattttaacataagaggg 40927541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 44500032 - 44500071
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  44500032 cttttcaagagagggaagtgtatattttaacataagaggg 44500071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 49080606 - 49080637
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  49080606 gggaggggagtgtatattttaacataagaggg 49080637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 1364049 - 1364079
Alignment:
Q  28 gggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  1364049 gggaggggagtgtatattttaacataagagg 1364079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 3541073 - 3541115
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||    
T  3541073 cttttcatgggaggggaatgtatattttaacataagagagaag 3541115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 20612106 - 20612140
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||| |||||||||||||||||||||||||    
T  20612106 gggaggggattgtatattttaacataagagggaag 20612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 40974692 - 40974726
Alignment:
Q  25 caagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||||||||||||||||||||||||||||    
T  40974692 caagtgaggggagtgtatattttaacataagaggg 40974726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 54606421 - 54606451
Alignment:
Q  28 gggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  54606421 gggaggggagtgtatattttaacataagagg 54606451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 20030565 - 20030606
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||  ||||||| ||||||||||||||||    
T  20030565 ttcttttcaagggaggaaagtgtatgttttaacataagaggg 20030606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 44950396 - 44950359
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  44950396 cttttaaagggaggggagtgtatatttcaacataagag 44950359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 47794638 - 47794679
Alignment:
Q  18 ttcttttcaagggagggg-agtgtatattttaacataagagg 58  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  47794638 ttcttttcaagggagggggaatgtatattttaacataagagg 47794679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 53329420 - 53329379
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| |||||||||||||||||||||||| |||| ||||    
T  53329420 ttctttttaagggaggggagtgtatattttaatataaaaggg 53329379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 53333098 - 53333057
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| |||||||||||||||||||||||| |||| ||||    
T  53333098 ttctttttaagggaggggagtgtatattttaatataaaaggg 53333057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 809791 - 809755
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  809791 ttttcaagggaggtgagtgtatattttaacttaagag 809755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 2756607 - 2756635
Alignment:
Q  31 aggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||    
T  2756607 aggggagtgtatattttaacataagaggg 2756635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 25259322 - 25259286
Alignment:
Q  23 ttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||| | ||||||||||||||||||||||    
T  25259322 ttcaagggagggaaatgtatattttaacataagaggg 25259286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 30604756 - 30604720
Alignment:
Q  26 aagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  30604756 aagggatgggagtgtatattttaacataagagagaag 30604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 32255135 - 32255099
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  32255135 cttttcaagggagggtagtgtatattttaatataaga 32255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 45307355 - 45307387
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggga 60  Q
    ||||||| |||||||||||||||||||||||||    
T  45307355 gggagggaagtgtatattttaacataagaggga 45307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 49080044 - 49080007
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  49080044 cttttcaagggaggggagt--atattttaacataagaggg 49080007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 53336781 - 53336745
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataa 54  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  53336781 ttctttttaagggaggggagtgtatattttaatataa 53336745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 6e-62; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 93 - 335
Target Start/End: Complemental strand, 24526165 - 24525913
Alignment:
Q  93 cttcagaaatcatggaactcgacaatcaaattgaaaattatatcatggatgctcattatttatggttacttttataatttgatgggattagcgattgtta 192  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||  ||     
T  24526165 cttcagagatcatggaactcgacaattaaattgaaaattatatcatgaatgttcattatttatggttacttttataatgtgatgggattagtgatctttc 24526066  T
Q  193 aataaagttgagagaaactagacagaatattgcttatccaatgatgcacttacttttgaagttagcattattgttgc--gtgtcgagtgcaaatgatgaa 290  Q
    ||||||||||| | ||| |||| |  || ||| |||||||||| ||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||    
T  24526065 aataaagttgacaaaaagtagaaaacatgttggttatccaatgttgcacttacttttgaagctagcattattgttgcttgtggcgagtgcaaatgatgaa 24525966  T
Q  291 agaagt--------tagaaactttatggatagtcaaatgggcaaccacatgga 335  Q
    ||||||        ||||||| ||||||||||||||||| ||||||| |||||    
T  24525965 agaagtttttctactagaaacgttatggatagtcaaatgcgcaaccatatgga 24525913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 93 - 335
Target Start/End: Complemental strand, 24532836 - 24532584
Alignment:
Q  93 cttcagaaatcatggaactcgacaatcaaattgaaaattatatcatggatgctcattatttatggttacttttataatttgatgggattagcgattgtta 192  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||  ||     
T  24532836 cttcagagatcgtggaattcgaaaatcaaattgaaaattatatcatggatgttcattatttatggttacttttataatgtgatgggattagtgatctttc 24532737  T
Q  193 aataaagttgagagaaactagacagaatattgcttatccaatgatgcacttacttttgaagttagcattattgttgc--gtgtcgagtgcaaatgatgaa 290  Q
    || |||||||||| ||| |||| |  || ||| ||||||||||  ||||||| |||||||| |||||||||||||||  ||| |||||||||||||||||    
T  24532736 aagaaagttgagaaaaagtagaaaacatgttggttatccaatgtcgcacttagttttgaagctagcattattgttgcttgtggcgagtgcaaatgatgaa 24532637  T
Q  291 agaagt--------tagaaactttatggatagtcaaatgggcaaccacatgga 335  Q
    ||||||        ||||||| ||||||||||||||||| ||||||| |||||    
T  24532636 agaagtttctctactagaaacgttatggatagtcaaatgtgcaaccatatgga 24532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 6229874 - 6229916
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6229874 cttttcaagggaggggagtgtatattttaacataagagggaag 6229916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 33146119 - 33146080
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33146119 cttttcaagggaggggagtgtatattttaacataagaggg 33146080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37009649 - 37009688
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37009649 cttttcaagggaggggagtgtatattttaacataagaggg 37009688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37199589 - 37199628
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37199589 cttttcaagggaggggagtgtatattttaacataagaggg 37199628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 37329783 - 37329746
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37329783 ttttcaagggaggggagtgtatattttaacataagagg 37329746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 11052219 - 11052263
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaagtgt 65  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  11052219 ttttcaagggaggggagtatatattttaacataaaagggaagtgt 11052263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 3515462 - 3515501
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3515462 cttttcaaaggaggggagtgtatattttaacataagaggg 3515501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 11564458 - 11564497
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  11564458 cttttcaagggaggagagtgtatattttaacataagaggg 11564497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 31597309 - 31597270
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  31597309 cttttcaagggaggggagtttatattttaacataagaggg 31597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 34173703 - 34173742
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  34173703 cttttcaagggaggggaatgtatattttaacataagaggg 34173742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 3045588 - 3045630
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3045588 cttttcaagagagggaagtgtatattttaacataagagggaag 3045630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 7939411 - 7939369
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  7939411 cttttcaagggaggtaagtgtatattttaacataagagggaag 7939369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 28167624 - 28167582
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  28167624 ctttttaagggaggagagtgtatattttaacataagagggaag 28167582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 40769359 - 40769397
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40769359 cttttcaagggaggagagtgtatattttaacataagagg 40769397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 37199000 - 37198963
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaagtgt 65  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37199000 gggaggggagtgtatattttaacataagaggggagtgt 37198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 43439789 - 43439826
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43439789 ttttcaagggaggagagtgtatattttaacataagagg 43439826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 44332378 - 44332411
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||    
T  44332378 aagggaggggagtgtatattttaacataagaggg 44332411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 17829127 - 17829091
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaagtg 64  Q
    |||||||||||||||||||||||||||||||| ||||    
T  17829127 gggaggggagtgtatattttaacataagaggggagtg 17829091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4437968 - 4438007
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  4437968 ctttacaaggaaggggagtgtatattttaacataagaggg 4438007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 5474700 - 5474669
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  5474700 gggaggggagtgtatattttaacataagaggg 5474669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 10357118 - 10357149
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  10357118 gggaggggagtgtatattttaacataagaggg 10357149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 15006506 - 15006475
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  15006506 gggaggggagtgtatattttaacataagaggg 15006475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 31709151 - 31709112
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  31709151 cttttcaaggaagggaagtgtatattttaacataagaggg 31709112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 33146700 - 33146731
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  33146700 gggaggggagtgtatattttaacataagaggg 33146731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 34173122 - 34173091
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  34173122 gggaggggagtgtatattttaacataagaggg 34173091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 35175698 - 35175667
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  35175698 gggaggggagtgtatattttaacataagaggg 35175667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 41521665 - 41521696
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  41521665 gggaggggagtgtatattttaacataagaggg 41521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 3514879 - 3514845
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  3514879 gggaggggggtgtatattttaacataagagggaag 3514845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 17449815 - 17449769
Alignment:
Q  10 gtagattattcttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||| | ||||| ||| |||||||||||||||||||||||||||    
T  17449815 gtagattttacttttgaagagaggggagtgtatattttaacataaga 17449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 22298241 - 22298279
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  22298241 ttttcaagggagaagagtgtatattttaacataagaggg 22298279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 11051635 - 11051606
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  11051635 gggaggggagtgtatattttaacataagag 11051606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 13873391 - 13873362
Alignment:
Q  29 ggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||||||||||||||||||    
T  13873391 ggaggggagtgtatattttaacataagagg 13873362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 14013516 - 14013487
Alignment:
Q  29 ggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||||||||||||||||||    
T  14013516 ggaggggagtgtatattttaacataagagg 14013487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 31363969 - 31363936
Alignment:
Q  29 ggaggggagtgtatattttaacataagagggaag 62  Q
    |||||| |||||||||||||||||||||||||||    
T  31363969 ggagggaagtgtatattttaacataagagggaag 31363936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 32235937 - 32235978
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||||| |||||||| |||||||||| ||||||||||    
T  32235937 ttttcaagggatgggagtgtgtattttaacaaaagagggaag 32235978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 32875240 - 32875199
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  32875240 ttttcaagggagagaagtgtatattttaacataagagagaag 32875199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 33476546 - 33476583
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  33476546 cttttcaagagaggggagcgtatattttaacataagag 33476583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 41078156 - 41078185
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  41078156 gggaggggagtgtatattttaacataagag 41078185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13873976 - 13874012
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||  |||||||||||||||||||||||    
T  13873976 ttttcaagggagatgagtgtatattttaacataagag 13874012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 14014101 - 14014137
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||  |||||||||||||||||||||||    
T  14014101 ttttcaagggagatgagtgtatattttaacataagag 14014137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 26196290 - 26196254
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  26196290 ttttcaatggatgggagtgtatattttaacataagag 26196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 11374 - 11335
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11374 cttttcaagggaggggagtgtatattttaacataagaggg 11335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 59345 - 59306
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  59345 cttttcaagggaggggagtgtatattttaacataagaggg 59306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 14712 - 14751
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14712 cttttcaagggaggggagtgtatattttaacataagaggg 14751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 28858 - 28897
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28858 cttttcaagggaggggagtgtatattttaacataagaggg 28897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 421232 - 421193
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  421232 cttttctagggaggggagtgtatattttaacataagaggg 421193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 17564755 - 17564716
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17564755 cttttcaagggaggggagtgtatattttaacataagaggg 17564716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 14094138 - 14094179
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14094138 ttcttttcaagggaggggagtgtaaattttaacataagaggg 14094179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 34925395 - 34925432
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34925395 cttttcaagggaggggagtgtatattttaacataagag 34925432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 44746260 - 44746220
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaa 61  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  44746260 ttttcaagggaggggaatgtatattttaacataagagggaa 44746220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 253610 - 253571
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  253610 cttttcaagggagaggagtgtatattttaacataagaggg 253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 662248 - 662287
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  662248 cttttcaagggagaggagtgtatattttaacataagaggg 662287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 848046 - 848085
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  848046 cttttcaagggagaggagtgtatattttaacataagaggg 848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 31740139 - 31740178
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  31740139 cttttcaagggaggggagtgtatattttaatataagaggg 31740178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37266132 - 37266171
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  37266132 cttttcaagggagtggagtgtatattttaacataagaggg 37266171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 40791133 - 40791094
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  40791133 cttttcaagggagggtagtgtatattttaacataagaggg 40791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 12336282 - 12336320
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12336282 cttttcaagggagggaagtgtatattttaacataagagg 12336320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 17734901 - 17734943
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  17734901 cttttcaagggaggtgaatgtatattttaacataagagggaag 17734943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 13439511 - 13439478
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataa 54  Q
    ||||||||||||||||||||||||||||||||||    
T  13439511 ttttcaagggaggggagtgtatattttaacataa 13439478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 11141052 - 11141088
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||| ||||||||||||||||||||||||||||||    
T  11141052 ttttcatgggaggggagtgtatattttaacataagag 11141088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 8438558 - 8438601
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaagtg 64  Q
    |||||||  |||||||||||||||||||||||||||| ||||||    
T  8438558 ttttcaatagaggggagtgtatattttaacataagagagaagtg 8438601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 11140173 - 11140142
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  11140173 gggaggggagtgtatattttaacataagaggg 11140142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 31739588 - 31739557
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  31739588 gggaggggagtgtatattttaacataagaggg 31739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 33972961 - 33973000
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggga 60  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  33972961 ttttcaagggaggagattgtatattttaacataagaggga 33973000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 37872857 - 37872896
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  37872857 cttttcaaggaaggggaatgtatattttaacataagaggg 37872896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 42166104 - 42166069
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataaga 56  Q
    |||||||||||| |||||||||||||||||||||||    
T  42166104 ttttcaagggagtggagtgtatattttaacataaga 42166069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 8443315 - 8443353
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| || |||||||||||||||||||||||    
T  8443315 cttttcaagggaaggaagtgtatattttaacataagagg 8443353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 13421520 - 13421490
Alignment:
Q  28 gggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  13421520 gggaggggagtgtatattttaacataagagg 13421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 13422065 - 13422095
Alignment:
Q  29 ggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||    
T  13422065 ggaggggagtgtatattttaacataagaggg 13422095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 24809669 - 24809631
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  24809669 ttttcaagggatggaagtgtatattttaacataagaggg 24809631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 30354517 - 30354551
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataa 54  Q
    ||||||||||||| |||||||||||||||||||||    
T  30354517 cttttcaagggagaggagtgtatattttaacataa 30354551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Complemental strand, 37837006 - 37836972
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataa 54  Q
    ||||||||||||||||| |||||||||||||||||    
T  37837006 cttttcaagggaggggaatgtatattttaacataa 37836972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 44284341 - 44284379
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  44284341 ttttcaagggaggaaagtgtatattttaacataagaggg 44284379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 3075957 - 3075994
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  3075957 ttttcaagagaggggagtgtatattttaatataagagg 3075994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 8437976 - 8437947
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  8437976 gggaggggagtgtatattttaacataagag 8437947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 30056374 - 30056337
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| | |||||||||||||||||||||    
T  30056374 cttttcaagggaggagtgtgtatattttaacataagag 30056337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 34923920 - 34923891
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  34923920 gggaggggagtgtatattttaacataagag 34923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 36016750 - 36016786
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36016750 cttttcaagggaggg-agtgtatattttaacataagag 36016786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 59
Target Start/End: Original strand, 40791755 - 40791784
Alignment:
Q  30 gaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||    
T  40791755 gaggggagtgtatattttaacataagaggg 40791784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 41312376 - 41312409
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||| ||||||||||||||||||||||    
T  41312376 aagggaggggaatgtatattttaacataagaggg 41312409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 31846523 - 31846495
Alignment:
Q  31 aggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||    
T  31846523 aggggagtgtatattttaacataagaggg 31846495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 34678682 - 34678646
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  34678682 ctttttaagggaggggagtgtatattttaacacaaga 34678646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 40299577 - 40299613
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  40299577 ctttttaagggagggaagtgtatattttaacataaga 40299613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 44746839 - 44746867
Alignment:
Q  30 gaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||    
T  44746839 gaggggagtgtatattttaacataagagg 44746867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 16425999 - 16426038
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16425999 cttttcaagggaggggagtgtatattttaacataagaggg 16426038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 20261571 - 20261610
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20261571 cttttcaagggaggggagtgtatattttaacataagaggg 20261610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 28308661 - 28308698
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28308661 ttttcaagggaggggagtgtatattttaacataagagg 28308698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 48872096 - 48872059
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48872096 cttttcaagggaggggagtgtatattttaacataagag 48872059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 3391842 - 3391798
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaagtg 64  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  3391842 ctttttaagggaggggagtgtatattttaacataagaggggagtg 3391798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 31221445 - 31221481
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    |||||||||||||||||||||||||||||||||||||    
T  31221445 cttttcaagggaggggagtgtatattttaacataaga 31221481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 12677184 - 12677145
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  12677184 cttttcatgggaggggagtgtatattttaacataagaggg 12677145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 40401541 - 40401580
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  40401541 cttttcaagggaagggagtgtatattttaacataagaggg 40401580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 46011109 - 46011151
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  46011109 cttttcaagggaggggagtgcatattttaacataagagagaag 46011151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5227937 - 5227897
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggga 60  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  5227937 ctttttaagggaggggaatgtatattttaacataagaggga 5227897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 32387565 - 32387525
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggga 60  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  32387565 cttttcaagggatggaagtgtatattttaacataagaggga 32387525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 1573743 - 1573782
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1573743 ctttgcaagggaggtgagtgtatattttaacataagaggg 1573782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 11639981 - 11639942
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  11639981 cttttcaaaggaggagagtgtatattttaacataagaggg 11639942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 12679079 - 12679040
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  12679079 cttttcatgggaggggaatgtatattttaacataagaggg 12679040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 13068397 - 13068432
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataaga 56  Q
    |||| |||||||||||||||||||||||||||||||    
T  13068397 ttttgaagggaggggagtgtatattttaacataaga 13068432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 14078433 - 14078402
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  14078433 gggaggggagtgtatattttaacataagaggg 14078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 14388461 - 14388430
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  14388461 gggaggggagtgtatattttaacataagaggg 14388430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22711719 - 22711680
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  22711719 cttttcaagagagtggagtgtatattttaacataagaggg 22711680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 27144258 - 27144227
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  27144258 gggaggggagtgtatattttaacataagaggg 27144227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 27619623 - 27619662
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  27619623 ctttttaagggagaggagtgtatattttaacataagaggg 27619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 29615601 - 29615562
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  29615601 ctttttaagggaggggaatgtatattttaacataagaggg 29615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 32867900 - 32867931
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  32867900 gggaggggagtgtatattttaacataagaggg 32867931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 34999262 - 34999231
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  34999262 gggaggggagtgtatattttaacataagaggg 34999231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 36688849 - 36688888
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  36688849 cttttcaagggaggaaagtgtatattttaacataagaggg 36688888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 36847909 - 36847878
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  36847909 gggaggggagtgtatattttaacataagaggg 36847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 38987837 - 38987798
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  38987837 cttttcaagagagtggagtgtatattttaacataagaggg 38987798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 48982536 - 48982567
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  48982536 gggaggggagtgtatattttaacataagaggg 48982567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 2790164 - 2790126
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  2790164 ttttcaagggaggggaatgtatattttaacttaagaggg 2790126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 8123267 - 8123305
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  8123267 ttttcaagagagggaagtgtatattttaacataagaggg 8123305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 26200467 - 26200509
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||||||||||| |||||||| |||||||||| |||||    
T  26200467 cttttcaagggaggggaatgtatattataacataagaaggaag 26200509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 29736226 - 29736172
Alignment:
Q  10 gtagattattcttttcaagggaggggagtgtatattttaacataagagggaagtg 64  Q
    ||||||| | ||||||||||| ||  | |||||||||||||||||||||||||||    
T  29736226 gtagattttacttttcaagggtggaaaatgtatattttaacataagagggaagtg 29736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 30869992 - 30869954
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  30869992 ttttcaagggaggaaagtgtatattttaacataagaggg 30869954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 32867328 - 32867290
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  32867328 ttttcaaaggagaggagtgtatattttaacataagaggg 32867290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 33869270 - 33869240
Alignment:
Q  28 gggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  33869270 gggaggggagtgtatattttaacataagagg 33869240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 40343835 - 40343801
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||||||||||||||||| |||||||||||    
T  40343835 gggaggggagtgtatattttaacttaagagggaag 40343801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 42813107 - 42813065
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||| ||||| | ||||||||||||||||||||||||||    
T  42813107 cttttcaacggaggagtgtgtatattttaacataagagggaag 42813065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 22264432 - 22264465
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||| ||||||||||||||||||||||    
T  22264432 aagggaggggattgtatattttaacataagaggg 22264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 29103597 - 29103564
Alignment:
Q  29 ggaggggagtgtatattttaacataagagggaag 62  Q
    |||||| |||||||||||||||||||||||||||    
T  29103597 ggagggaagtgtatattttaacataagagggaag 29103564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 33576681 - 33576718
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  33576681 cttttcaaaagaggggagtgtatattttaacataagag 33576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 32388145 - 32388181
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaagtg 64  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  32388145 gggagggaagtgtatattttaacataagaggggagtg 32388181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 21802594 - 21802633
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21802594 cttttcaagggaggggagtgtatattttaacataagaggg 21802633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 15499486 - 15499523
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15499486 cttttcaagggaggggagtgtatattttaacataagag 15499523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 2522753 - 2522714
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  2522753 cttttcaagggaggggagtgtatattttaatataagaggg 2522714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22342182 - 22342143
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  22342182 cttttcaagggagggaagtgtatattttaacataagaggg 22342143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 10702925 - 10702963
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10702925 ttttcaagggagggaagtgtatattttaacataagaggg 10702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 12767597 - 12767635
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  12767597 ttttcaagggagggaagtgtatattttaacataagaggg 12767635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 31282235 - 31282273
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31282235 cttttcaagggaggggggtgtatattttaacataagagg 31282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 32114397 - 32114435
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  32114397 cttttcaagggagaggagtgtatattttaacataagagg 32114435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 22022270 - 22022303
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||    
T  22022270 aagggaggggagtgtatattttaacataagaggg 22022303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 22342272 - 22342236
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22342272 cttttcaagggagggaagtgtatattttaacataaga 22342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 4100591 - 4100560
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  4100591 gggaggggagtgtatattttaacataagaggg 4100560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4101114 - 4101153
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  4101114 cttttcaaaggaggagagtgtatattttaacataagaggg 4101153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 4125953 - 4125922
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  4125953 gggaggggagtgtatattttaacataagaggg 4125922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4126477 - 4126516
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  4126477 cttttcaaaggaggagagtgtatattttaacataagaggg 4126516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 10702347 - 10702316
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  10702347 gggaggggagtgtatattttaacataagaggg 10702316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 12026195 - 12026226
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  12026195 gggaggggagtgtatattttaacataagaggg 12026226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 14306876 - 14306837
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  14306876 cttttcaaggaagggaagtgtatattttaacataagaggg 14306837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 30461525 - 30461486
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  30461525 cttttcaagggagagaagtgtatattttaacataagaggg 30461486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 32113815 - 32113784
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  32113815 gggaggggagtgtatattttaacataagaggg 32113784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 6937894 - 6937932
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  6937894 cttttcaagggagtggagtgtatattttaacttaagagg 6937932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 12693922 - 12693892
Alignment:
Q  28 gggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  12693922 gggaggggagtgtatattttaacataagagg 12693892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 14313275 - 14313237
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  14313275 ttttcaagggagggaagtgtatattttaacataaaaggg 14313237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 59
Target Start/End: Original strand, 7448890 - 7448919
Alignment:
Q  30 gaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||    
T  7448890 gaggggagtgtatattttaacataagaggg 7448919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 17307276 - 17307248
Alignment:
Q  34 ggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||||||||||||    
T  17307276 ggagtgtatattttaacataagagggaag 17307248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 21802015 - 21801987
Alignment:
Q  28 gggaggggagtgtatattttaacataaga 56  Q
    |||||||||||||||||||||||||||||    
T  21802015 gggaggggagtgtatattttaacataaga 21801987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 13482268 - 13482229
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13482268 cttttcaagggaggggagtgtatattttaacataagaggg 13482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 48372502 - 48372461
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  48372502 ttcttttcaagggaggggagtatatattttaacataagaggg 48372461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 36898087 - 36898123
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataa 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  36898087 ttcttttcaagggaggggagtgtatattttaacataa 36898123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 7479336 - 7479375
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7479336 cttttcaagggagggaagtgtatattttaacataagaggg 7479375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 35667371 - 35667410
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35667371 cttttcaagggagggaagtgtatattttaacataagaggg 35667410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 51019736 - 51019697
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  51019736 cttttcaagggagggaagtgtatattttaacataagaggg 51019697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 55068928 - 55068889
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  55068928 ctttacaagggaggggagtgtatattttaacataagaggg 55068889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 19313429 - 19313391
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  19313429 tttttaagggaggggagtgtatattttaacataagaggg 19313391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 23722042 - 23722080
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  23722042 ttttcaagggagggtagtgtatattttaacataagaggg 23722080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 37147823 - 37147785
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  37147823 ttttcaagggagggaagtgtatattttaacataagaggg 37147785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8138406 - 8138369
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8138406 ttttcaagggagggaagtgtatattttaacataagagg 8138369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 37424438 - 37424475
Alignment:
Q  22 tttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||| |||||||||||||||||||||||||    
T  37424438 tttcaagggaggtgagtgtatattttaacataagaggg 37424475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 54096703 - 54096744
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  54096703 ttcttttcaagggatgggagtgtatattttaacataaaaggg 54096744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 7797603 - 7797639
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7797603 cttttcaagggagggaagtgtatattttaacataaga 7797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32448930 - 32448974
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaagtg 64  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||    
T  32448930 cttttcaaaggagggaagtgtatattttaacataagaggggagtg 32448974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 721969 - 722008
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  721969 cttttcaagggagatgagtgtatattttaacataagaggg 722008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 754953 - 754914
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  754953 cttttcaagggagatgagtgtatattttaacataagaggg 754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 16960282 - 16960251
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  16960282 gggaggggagtgtatattttaacataagaggg 16960251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 17722827 - 17722796
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  17722827 gggaggggagtgtatattttaacataagaggg 17722796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 18362687 - 18362726
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  18362687 cttttcaagggagtggagtgtatattttaatataagaggg 18362726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 25010047 - 25010086
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  25010047 cttttcaagggaatggagtgtatattttaacataagaggg 25010086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 35667281 - 35667312
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  35667281 gggaggggagtgtatattttaacataagaggg 35667312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 35667564 - 35667595
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  35667564 gggaggggagtgtatattttaacataagaggg 35667595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 35853643 - 35853604
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  35853643 cttttcaagggagggaggtgtatattttaacataagaggg 35853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 36600239 - 36600200
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  36600239 cttttcaagggagtggagtgtatattttaatataagaggg 36600200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 37708852 - 37708821
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  37708852 gggaggggagtgtatattttaacataagaggg 37708821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 59
Target Start/End: Complemental strand, 13771794 - 13771764
Alignment:
Q  29 ggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||    
T  13771794 ggaggggagtgtatattttaacataagaggg 13771764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 20545009 - 20545047
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  20545009 tttttaagggaggggaatgtatattttaacataagaggg 20545047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 26705118 - 26705080
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  26705118 ttttcaatggaggggtgtgtatattttaacataagaggg 26705080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 44664790 - 44664752
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  44664790 ttttcaagggaggagaatgtatattttaacataagaggg 44664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 7852313 - 7852350
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  7852313 ttttcaagggaggggattgtatattttgacataagagg 7852350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16960865 - 16960902
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  16960865 ttttcaagagagaggagtgtatattttaacataagagg 16960902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 17730171 - 17730204
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataa 54  Q
    |||||||||||||| |||||||||||||||||||    
T  17730171 ttttcaagggagggtagtgtatattttaacataa 17730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 21037383 - 21037346
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21037383 cttttcaagggaggaaagtgtatattttaacataagag 21037346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 26705667 - 26705696
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  26705667 gggaggggagtgtatattttaacataagag 26705696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 35666037 - 35666000
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  35666037 cttttcaagggaggtaagtgtatattttaacataagag 35666000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 51268539 - 51268576
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||||| || ||||||||||||||||||||||||    
T  51268539 cttttcaaggaagtggagtgtatattttaacataagag 51268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 53305759 - 53305722
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  53305759 ttttcaagggagcagagtgtatattttaacataagagg 53305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 54092826 - 54092867
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||| | ||||||||||||||||| ||||    
T  54092826 ttcttttcaagggagggaattgtatattttaacataaaaggg 54092867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 55814987 - 55815024
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  55814987 cttttcaagggagaggagtgtatattttaacgtaagag 55815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 4950018 - 4949982
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||| |||||| |||||||||||||||||||||||||    
T  4950018 tttttaagggaagggagtgtatattttaacataagag 4949982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 4950593 - 4950621
Alignment:
Q  28 gggaggggagtgtatattttaacataaga 56  Q
    |||||||||||||||||||||||||||||    
T  4950593 gggaggggagtgtatattttaacataaga 4950621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 16192310 - 16192342
Alignment:
Q  25 caagggaggggagtgtatattttaacataagag 57  Q
    |||| ||||||||||||||||||||||||||||    
T  16192310 caagtgaggggagtgtatattttaacataagag 16192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 16536456 - 16536417
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16536456 cttttcaagggaggggagtgtatattttaacataagaggg 16536417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 17109389 - 17109352
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17109389 cttttcaagggaggggagtgtatattttaacataagag 17109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27225760 - 27225721
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27225760 cttttcaagggagggaagtgtatattttaacataagaggg 27225721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 29510476 - 29510510
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||||||||||||||||||    
T  29510476 gggaggggagtgtatattttaacataagagggaag 29510510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 36604811 - 36604769
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  36604811 cttttcaaaggagggaagtgtatattttaacataagagggaag 36604769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 45195236 - 45195270
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||||||||||||||||||||||    
T  45195236 gggaggggagtgtatattttaacataagagggaag 45195270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 45737388 - 45737350
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  45737388 ttttcaagggaggagagtgtatattttaacataagaggg 45737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 50143468 - 50143430
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  50143468 ttttcaagggaggggaatgtatattttaacataagaggg 50143430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 9997994 - 9998027
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||||    
T  9997994 aagggaggggagtgtatattttaacataagaggg 9998027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 31765417 - 31765380
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||| |||||||||||    
T  31765417 ttttcaagggaggggagtgtatatttgaacataagagg 31765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41575830 - 41575871
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  41575830 ttctttttaagggagggaagtgtatattttaacataagaggg 41575871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 42831191 - 42831228
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42831191 cttttcaaaggaggggagtgtatattttaacataagag 42831228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 10012444 - 10012480
Alignment:
Q  23 ttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10012444 ttcaagggagggaagtgtatattttaacataagaggg 10012480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 18406613 - 18406577
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18406613 ttttcaagggagggtagtgtatattttaacataagag 18406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 47292228 - 47292272
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||    
T  47292228 ttcttttcaagggaggagagtgtatagtttaacataagaaggaag 47292272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 2275173 - 2275134
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  2275173 ctttttaagggagaggagtgtatattttaacataagaggg 2275134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 28970915 - 28970876
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  28970915 cttttcaagggaggagagtgtatattttaacataggaggg 28970876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 45738084 - 45738045
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  45738084 ctttttaagggagggaagtgtatattttaacataagaggg 45738045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 794746 - 794776
Alignment:
Q  29 ggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||||||||||    
T  794746 ggaggggagtgtatattttaacataagaggg 794776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 4667532 - 4667570
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  4667532 cttttcaagggagaagagtgtatattttaacataagagg 4667570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 13573583 - 13573541
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||| ||||||| |||||||| |||||||||||||||||    
T  13573583 cttttcaatggaggggcgtgtatatcttaacataagagggaag 13573541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 28198114 - 28198152
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  28198114 ttttcaagggaggagagtgtatatttaaacataagaggg 28198152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 41575250 - 41575216
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||| ||||||||||||||||||||||    
T  41575250 gggaggggagtgcatattttaacataagagggaag 41575216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 45559754 - 45559792
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  45559754 cttttcaaggaaggggattgtatattttaacataagagg 45559792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 43504446 - 43504487
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||| || |||| ||||||||||||||||||||||||||    
T  43504446 ttctttttaaaggagaggagtgtatattttaacataagaggg 43504487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 33126843 - 33126879
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||||||||||  |||||||||||||||||||||    
T  33126843 cttttcaagggaggaaagtgtatattttaacataaga 33126879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 44648714 - 44648666
Alignment:
Q  10 gtagattattcttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||| | |||| |||||||||  |||||||||||||||||||||||    
T  44648714 gtagattttactttacaagggaggaaagtgtatattttaacataagagg 44648666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 47233144 - 47233108
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    |||||||||| |||||| |||||||||||||||||||    
T  47233144 cttttcaaggaaggggaatgtatattttaacataaga 47233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 8573338 - 8573380
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  8573338 cttttcaaaggaggggagtgtatattttaacataagagggaag 8573380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 14594154 - 14594115
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  14594154 cttttcaagggagggaagtgtatattttaacataagaggg 14594115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 20259993 - 20260032
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  20259993 cttttcaagggagaggagtgtatattttaacataagaggg 20260032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27979316 - 27979277
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  27979316 cttttcaagggaggggaatgtatattttaacataagaggg 27979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 20570242 - 20570204
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  20570242 ttttcaagggaggggaatgtatattttaacataagaggg 20570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 36737439 - 36737477
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  36737439 ttttcaagggagggaagtgtatattttaacataagaggg 36737477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 36742205 - 36742167
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  36742205 ttttcaagggagggtagtgtatattttaacataagaggg 36742167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 36853702 - 36853669
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataa 54  Q
    ||||||||||||||||||||||||||||||||||    
T  36853702 ttttcaagggaggggagtgtatattttaacataa 36853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 4877372 - 4877403
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  4877372 gggaggggagtgtatattttaacataagaggg 4877403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 12585693 - 12585654
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  12585693 cttttcaagggaggaaagtgtatattttaacataagaggg 12585654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 14460554 - 14460511
Alignment:
Q  219 atattgcttatccaatgatgcacttacttttgaagttagcatta 262  Q
    ||||||||||||||||| || | |||||||||||||||||||||    
T  14460554 atattgcttatccaatggtgtatttacttttgaagttagcatta 14460511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 19408616 - 19408585
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  19408616 gggaggggagtgtatattttaacataagaggg 19408585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 35751593 - 35751562
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  35751593 gggaggggagtgtatattttaacataagaggg 35751562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 36742579 - 36742610
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  36742579 gggaggggagtgtatattttaacataagaggg 36742610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 36762199 - 36762160
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  36762199 cttttcaagggagggaagtgtatattttaaaataagaggg 36762160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 1199742 - 1199776
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaag 62  Q
    ||||||||||||||||||||||| |||||||||||    
T  1199742 gggaggggagtgtatattttaacttaagagggaag 1199776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 4876794 - 4876756
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  4876794 ttttcaagggaggagaatgtatattttaacataagaggg 4876756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 5138955 - 5138993
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  5138955 ttttcgagggaggagagtgtatattttaacataagaggg 5138993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 20184004 - 20184042
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20184004 ttttcaagggagggaagtgtatattgtaacataagaggg 20184042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 141608 - 141645
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  141608 cttttcaaaggaggggattgtatattttaacataagag 141645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 1406226 - 1406263
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  1406226 ttttcaatggaggagagtgtatattttaacataagagg 1406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 10687673 - 10687636
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  10687673 cttttcaagggagggaagtgtataatttaacataagag 10687636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 20570205 - 20570176
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  20570205 gggaggggagtgtatattttaacataagag 20570176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 21639678 - 21639715
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  21639678 ttttcaagggaggggagtgcatattttaatataagagg 21639715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 27979897 - 27979926
Alignment:
Q  28 gggaggggagtgtatattttaacataagag 57  Q
    ||||||||||||||||||||||||||||||    
T  27979897 gggaggggagtgtatattttaacataagag 27979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 8007714 - 8007754
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagagg 58  Q
    ||||||||| ||||||||||| |||||||||||| ||||||    
T  8007714 ttcttttcaggggaggggagtctatattttaacacaagagg 8007754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 19500851 - 19500815
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    |||| |||||||| |||||||||||||||||||||||    
T  19500851 ctttgcaagggagaggagtgtatattttaacataaga 19500815  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 21639095 - 21639059
Alignment:
Q  28 gggaggggagtgtatattttaacataagagggaagtg 64  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  21639095 gggaggagagtgtatattttaacataagaggggagtg 21639059  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 22731049 - 22731085
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||||||  |||||||||||||||||||||||||||    
T  22731049 cttttcaaaagaggggagtgtatattttaacataaga 22731085  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 40027015 - 40026975
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |  |||||||||||||||||||||||    
T  40027015 ttcttttcaagggatgaaagtgtatattttaacataagagg 40026975  T

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Target: scaffold0695 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 2310 - 2269
Alignment:
Q  18 ttcttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  2310 ttcttttcaagggaggggagtgtaaattttaacataagaggg 2269  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 17139 - 17177
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  17139 tttttaagggaggggagtgtatattttaacataagaggg 17177  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 185174 - 185216
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  185174 cttttcaaggaaggagagtgtatattttaacataagagggaag 185216  T

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Target: scaffold0368 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 11247 - 11284
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||| |||||||||||||||||||||||||||||    
T  11247 cttttcaaaggaggggagtgtatattttaacataagag 11284  T

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Target: scaffold0971 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 3184 - 3152
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacat 52  Q
    |||||||||||||||||||||||||||||||||    
T  3184 cttttcaagggaggggagtgtatattttaacat 3152  T

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Target: scaffold0289 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 3485 - 3454
Alignment:
Q  28 gggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||||||    
T  3485 gggaggggagtgtatattttaacataagaggg 3454  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 11619 - 11658
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  11619 cttttcaagagaggggagtgtataatttaacataagaggg 11658  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 100088 - 100049
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  100088 cttttcaagagaggagagtgtatattttaacataagaggg 100049  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 161338 - 161303
Alignment:
Q  24 tcaagggaggggagtgtatattttaacataagaggg 59  Q
    |||| |||||||||||||||||||||||||||||||    
T  161338 tcaatggaggggagtgtatattttaacataagaggg 161303  T

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Target: scaffold1192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 815 - 852
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagg 58  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  815 ttttcatgggaggggaatgtatattttaacataagagg 852  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 31349 - 31382
Alignment:
Q  26 aagggaggggagtgtatattttaacataagaggg 59  Q
    ||||||||||||||||||||||||||||| ||||    
T  31349 aagggaggggagtgtatattttaacataaaaggg 31382  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 26437 - 26401
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataagag 57  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26437 cttttcaagggaggggagtgtata-tttaacataagag 26401  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 351352 - 351311
Alignment:
Q  21 ttttcaagggaggggagtgtatattttaacataagagggaag 62  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  351352 ttttcaagggagtgaagtgtatattttaacataagagagaag 351311  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 25991 - 25955
Alignment:
Q  20 cttttcaagggaggggagtgtatattttaacataaga 56  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  25991 ctttttaaggcaggggagtgtatattttaacataaga 25955  T

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