View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9291_low_14 (Length: 336)
Name: NF9291_low_14
Description: NF9291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9291_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 26 - 322
Target Start/End: Original strand, 12508915 - 12509210
Alignment:
| Q |
26 |
gtgatatgttgtagtatttatatgtgtaaagttttggaattcagtgaaatatgattgcaagaatatagaatataccaatctcatcaannnnnnnatttgt |
125 |
Q |
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| T |
12508915 |
gtgatatgttgtagtatttatatgtgtaaagttttggaattcagtgaaatatgattgcaagaatatagaatatacccatctcatcaatttttttatttgt |
12509014 |
T |
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| Q |
126 |
gcacgtatgtcttcaagtgtcttaacatttttaatacttatattgtgtgcttgatttgtacttgcaagttgatctcccttcaacttggatgagtttattt |
225 |
Q |
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| T |
12509015 |
gcacgtatgtcttcaagtgtct-aacatttttaatacttatattgtgtgcttgatttgtacttgcaagttgatctcctttcaacttggatgagtttattt |
12509113 |
T |
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| Q |
226 |
ggttagtgagaattcttccaacttggtaatatgtacactgttggtattttgggagaatctaaatcaatcattatattgaactaagaacaaatacaca |
322 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
12509114 |
ggttagtgagaattcttccaacttggtaatatgtacactgttggtattttgggacaatctaaatcaatcattatattgaactaagaacaaatacaca |
12509210 |
T |
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