View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9291_low_35 (Length: 228)
Name: NF9291_low_35
Description: NF9291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9291_low_35 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 11422158 - 11421937
Alignment:
| Q |
7 |
ataattaagtttctatcacacacacatttcagtttaagaatatttagtgatgttagatttcatcgtctttcttaaccttaaatgatgaacttaaaatggg |
106 |
Q |
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| T |
11422158 |
ataattaagtttctatcacgcacacatttcagtttaagaatatttagtgatgttagatttcatcgtctttcttaacctcgaatgatgaacttaaaatggg |
11422059 |
T |
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| Q |
107 |
atactattactgtgaaatgcaagttctaaagtttatgggcagtggtgtttggagcttatttttcgaattcaccaaaactttgaagatttctgtgtatcta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11422058 |
atactattactgtgaaatgcaagttctaaagtttatgggcagtggtgtttggagcttatttttcgaattcaccaaaactttgaagatttctgtgtatcta |
11421959 |
T |
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| Q |
207 |
tcggtgtattttccatccttgc |
228 |
Q |
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|||||||||||||||||||||| |
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| T |
11421958 |
tcggtgtattttccatccttgc |
11421937 |
T |
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