View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9292_low_17 (Length: 204)
Name: NF9292_low_17
Description: NF9292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9292_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 8846084 - 8845908
Alignment:
| Q |
16 |
ccataaaccctattgaatggtatgcctccttccataattgcacctttcatttcggtcctttattaagtcaatttaaataatttgtcattatgaattttat |
115 |
Q |
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| T |
8846084 |
ccataaaccctattgaatggtatgcctccttccataattgcacctttcatttcggtcctttattaagtcaatttaaataatttgtcattatgaattttat |
8845985 |
T |
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| Q |
116 |
taaaagacaaacacacacaccccttaagataaatatatcaaataaaaatcataagctttattgcattttaactccaa |
192 |
Q |
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|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
8845984 |
taaaagacaaacacacacacaccttaagctaaatatatcaaataaaaatcataagctttattgcattttaagtccaa |
8845908 |
T |
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