View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9293_low_6 (Length: 414)
Name: NF9293_low_6
Description: NF9293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9293_low_6 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 29673316 - 29673476
Alignment:
| Q |
203 |
tgaactaaaagatgtaagagaagaccacgtgtaagattaagaaaatggaagaggggactcattaaaaaggtttgggatttcattgccaataagtgatcaa |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29673316 |
tgaactaaaagatgtaagagaagaccacgtgtaagattaagaaaatggaagaggggactcattaaaaaggtttgggatttcattgccaataagtgatcaa |
29673415 |
T |
|
| Q |
303 |
gacaaggtggggtatgaatgaggggtattgatgcatcatacaatgccacgaataccttgtt |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29673416 |
gacaaggtggggtatgaatgaggggtattgatgcatcatgcaatgccacgaataccttgtt |
29673476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University