View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9294_1 (Length: 494)

Name: NF9294_1
Description: NF9294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9294_1
NF9294_1
[»] chr1 (55 HSPs)
chr1 (12-214)||(43589460-43589677)
chr1 (391-439)||(26768579-26768627)
chr1 (339-439)||(46084009-46084109)
chr1 (339-433)||(18114272-18114366)
chr1 (339-439)||(15624687-15624787)
chr1 (352-423)||(37589096-37589167)
chr1 (92-150)||(33541839-33541897)
chr1 (378-439)||(27255467-27255528)
chr1 (215-256)||(34931340-34931381)
chr1 (351-423)||(24855436-24855508)
chr1 (371-423)||(26547680-26547732)
chr1 (292-336)||(26768457-26768501)
chr1 (220-252)||(33337066-33337098)
chr1 (351-423)||(42872144-42872216)
chr1 (276-336)||(43589340-43589400)
chr1 (371-423)||(45038173-45038225)
chr1 (352-423)||(943447-943518)
chr1 (352-423)||(8104100-8104171)
chr1 (352-423)||(11741553-11741624)
chr1 (352-423)||(11907038-11907109)
chr1 (352-423)||(15892374-15892445)
chr1 (352-423)||(16456792-16456863)
chr1 (221-256)||(25284069-25284104)
chr1 (352-423)||(28885913-28885984)
chr1 (352-423)||(28888233-28888304)
chr1 (352-423)||(46075678-46075749)
chr1 (352-423)||(47300703-47300774)
chr1 (352-423)||(50246740-50246811)
chr1 (352-423)||(51422237-51422308)
chr1 (352-423)||(52430984-52431055)
chr1 (224-254)||(13274587-13274617)
chr1 (352-418)||(16575907-16575973)
chr1 (215-256)||(6089996-6090037)
chr1 (370-423)||(9715534-9715587)
chr1 (219-256)||(15290186-15290223)
chr1 (370-423)||(23530719-23530772)
chr1 (370-423)||(25228370-25228423)
chr1 (219-256)||(28052187-28052224)
chr1 (338-439)||(30761039-30761140)
chr1 (378-423)||(32906777-32906822)
chr1 (394-423)||(52001540-52001569)
chr1 (339-427)||(9424910-9424998)
chr1 (371-423)||(13343948-13344000)
chr1 (387-423)||(21630916-21630952)
chr1 (219-255)||(22567064-22567100)
chr1 (220-256)||(23530541-23530577)
chr1 (355-423)||(32149121-32149189)
chr1 (220-256)||(32906704-32906740)
chr1 (224-256)||(35160314-35160346)
chr1 (391-431)||(35693259-35693299)
chr1 (220-256)||(35693327-35693363)
chr1 (371-423)||(38261515-38261567)
chr1 (276-336)||(38505855-38505915)
chr1 (276-336)||(38613531-38613591)
chr1 (338-374)||(43589279-43589315)
[»] chr3 (65 HSPs)
chr3 (340-439)||(16776541-16776640)
chr3 (339-439)||(16776680-16776781)
chr3 (338-426)||(29383156-29383244)
chr3 (360-426)||(18657586-18657651)
chr3 (352-426)||(35938517-35938591)
chr3 (378-439)||(20084681-20084742)
chr3 (339-439)||(13702650-13702750)
chr3 (352-423)||(26221444-26221515)
chr3 (352-423)||(32569153-32569224)
chr3 (92-150)||(28795963-28796021)
chr3 (219-256)||(8322186-8322223)
chr3 (215-256)||(45513370-45513411)
chr3 (352-417)||(54866429-54866494)
chr3 (220-256)||(13809547-13809583)
chr3 (276-336)||(30819934-30819994)
chr3 (371-439)||(38364343-38364410)
chr3 (220-256)||(41750926-41750962)
chr3 (351-423)||(45745933-45746005)
chr3 (355-423)||(49383643-49383711)
chr3 (352-423)||(7051530-7051601)
chr3 (352-423)||(7181506-7181577)
chr3 (352-423)||(7251092-7251163)
chr3 (352-423)||(10656847-10656918)
chr3 (352-423)||(20848988-20849059)
chr3 (352-423)||(23308094-23308165)
chr3 (352-423)||(30040827-30040898)
chr3 (352-423)||(31531221-31531292)
chr3 (352-423)||(33212552-33212623)
chr3 (352-423)||(40919110-40919181)
chr3 (352-423)||(42390714-42390785)
chr3 (352-423)||(43686657-43686728)
chr3 (352-423)||(43868259-43868330)
chr3 (352-423)||(45252929-45253000)
chr3 (352-423)||(49127008-49127079)
chr3 (352-423)||(51489523-51489594)
chr3 (352-423)||(52673343-52673414)
chr3 (352-423)||(53686807-53686878)
chr3 (352-423)||(54107509-54107580)
chr3 (221-255)||(16776890-16776924)
chr3 (218-256)||(18657683-18657721)
chr3 (92-150)||(19983661-19983719)
chr3 (217-254)||(1111384-1111421)
chr3 (370-423)||(4759160-4759213)
chr3 (219-256)||(14759097-14759134)
chr3 (213-246)||(27646038-27646071)
chr3 (74-150)||(30574033-30574107)
chr3 (378-423)||(31186938-31186983)
chr3 (370-423)||(46845302-46845355)
chr3 (378-423)||(50517332-50517377)
chr3 (218-255)||(52177797-52177834)
chr3 (371-423)||(6784637-6784689)
chr3 (391-423)||(9780050-9780082)
chr3 (276-336)||(16776808-16776868)
chr3 (213-245)||(18658160-18658192)
chr3 (387-423)||(19350187-19350223)
chr3 (220-256)||(20621424-20621460)
chr3 (220-256)||(24813601-24813637)
chr3 (219-255)||(29454789-29454825)
chr3 (276-336)||(38364222-38364282)
chr3 (391-423)||(41392690-41392722)
chr3 (351-423)||(42801592-42801664)
chr3 (276-336)||(47008423-47008483)
chr3 (387-423)||(47067125-47067161)
chr3 (371-423)||(49383518-49383570)
chr3 (371-423)||(50433199-50433251)
[»] chr8 (47 HSPs)
chr8 (338-439)||(24260748-24260849)
chr8 (440-494)||(1004575-1004629)
chr8 (341-426)||(39970113-39970198)
chr8 (355-439)||(19700803-19700887)
chr8 (352-423)||(14625683-14625754)
chr8 (380-439)||(19715637-19715696)
chr8 (352-423)||(25056711-25056782)
chr8 (352-423)||(30140238-30140309)
chr8 (377-439)||(16894061-16894123)
chr8 (219-256)||(31618990-31619027)
chr8 (391-428)||(42486256-42486293)
chr8 (351-423)||(16448563-16448635)
chr8 (351-423)||(24992670-24992742)
chr8 (352-423)||(50905-50976)
chr8 (352-423)||(1774498-1774569)
chr8 (339-398)||(2786260-2786318)
chr8 (352-423)||(5162460-5162531)
chr8 (352-423)||(5774205-5774276)
chr8 (352-423)||(8251743-8251814)
chr8 (352-423)||(8948161-8948232)
chr8 (355-422)||(15021169-15021236)
chr8 (352-423)||(16117261-16117332)
chr8 (352-423)||(16125520-16125591)
chr8 (352-423)||(18455876-18455947)
chr8 (352-423)||(18754301-18754372)
chr8 (352-423)||(21652292-21652363)
chr8 (352-423)||(29598380-29598451)
chr8 (391-426)||(30512959-30512994)
chr8 (217-256)||(33865279-33865318)
chr8 (352-423)||(34490673-34490744)
chr8 (352-423)||(35504390-35504461)
chr8 (352-423)||(36661736-36661807)
chr8 (352-423)||(38183376-38183447)
chr8 (352-423)||(38878877-38878948)
chr8 (352-423)||(38967299-38967370)
chr8 (92-150)||(14956426-14956484)
chr8 (210-256)||(23487325-23487371)
chr8 (214-255)||(12802604-12802645)
chr8 (352-417)||(29806039-29806104)
chr8 (378-423)||(35143332-35143377)
chr8 (79-152)||(41589561-41589633)
chr8 (215-255)||(13568908-13568948)
chr8 (391-423)||(35203030-35203062)
chr8 (391-423)||(40855991-40856023)
chr8 (351-423)||(42985326-42985398)
chr8 (371-423)||(44747222-44747274)
chr8 (378-422)||(45283601-45283645)
[»] chr6 (18 HSPs)
chr6 (339-426)||(2746351-2746438)
chr6 (351-423)||(8646015-8646087)
chr6 (339-437)||(2665527-2665625)
chr6 (352-423)||(287224-287295)
chr6 (352-423)||(2090815-2090886)
chr6 (352-423)||(10195804-10195875)
chr6 (352-423)||(15966972-15967043)
chr6 (352-423)||(19418934-19419005)
chr6 (352-423)||(25197308-25197379)
chr6 (352-423)||(33487987-33488058)
chr6 (221-255)||(13011123-13011157)
chr6 (353-423)||(13690542-13690612)
chr6 (378-423)||(11104733-11104778)
chr6 (370-423)||(25045453-25045506)
chr6 (219-256)||(31149985-31150022)
chr6 (219-255)||(9341836-9341872)
chr6 (220-256)||(13866856-13866892)
chr6 (220-256)||(15498890-15498926)
[»] chr5 (49 HSPs)
chr5 (339-439)||(37206262-37206362)
chr5 (378-439)||(7956469-7956530)
chr5 (339-429)||(37700236-37700326)
chr5 (341-429)||(16099376-16099461)
chr5 (352-423)||(8283918-8283989)
chr5 (360-439)||(33818821-33818900)
chr5 (378-439)||(10116764-10116825)
chr5 (220-256)||(7940713-7940749)
chr5 (391-423)||(9438901-9438933)
chr5 (394-426)||(10561263-10561295)
chr5 (351-423)||(16153065-16153137)
chr5 (92-212)||(16937937-16938056)
chr5 (351-423)||(35039152-35039224)
chr5 (352-423)||(1266105-1266176)
chr5 (352-423)||(4753028-4753099)
chr5 (352-423)||(6673038-6673109)
chr5 (352-423)||(9065063-9065134)
chr5 (352-423)||(9264129-9264200)
chr5 (352-423)||(13862805-13862876)
chr5 (352-423)||(14619405-14619476)
chr5 (352-423)||(15521752-15521823)
chr5 (352-423)||(17674468-17674539)
chr5 (352-423)||(22527848-22527919)
chr5 (352-423)||(25600870-25600941)
chr5 (352-423)||(30182996-30183067)
chr5 (352-423)||(31889049-31889120)
chr5 (352-423)||(34662360-34662431)
chr5 (352-423)||(39984927-39984998)
chr5 (352-418)||(4984931-4984997)
chr5 (92-150)||(7319142-7319200)
chr5 (339-429)||(13335430-13335520)
chr5 (217-255)||(22657764-22657802)
chr5 (339-425)||(26699459-26699545)
chr5 (339-425)||(26969192-26969278)
chr5 (352-418)||(28041166-28041232)
chr5 (215-256)||(7956409-7956450)
chr5 (219-256)||(13759186-13759223)
chr5 (370-423)||(15774873-15774926)
chr5 (92-149)||(17107968-17108025)
chr5 (77-148)||(32372493-32372561)
chr5 (370-423)||(32617586-32617639)
chr5 (92-145)||(32703574-32703627)
chr5 (93-150)||(39105356-39105413)
chr5 (220-256)||(4194941-4194977)
chr5 (371-423)||(11780929-11780981)
chr5 (276-336)||(16285111-16285171)
chr5 (351-423)||(20186656-20186728)
chr5 (339-439)||(30117258-30117357)
chr5 (371-423)||(40643269-40643321)
[»] chr2 (44 HSPs)
chr2 (339-426)||(12969654-12969741)
chr2 (339-439)||(11083480-11083580)
chr2 (352-423)||(31751228-31751299)
chr2 (92-149)||(9833045-9833103)
chr2 (355-439)||(4897448-4897530)
chr2 (355-439)||(4944842-4944924)
chr2 (92-168)||(26626767-26626844)
chr2 (219-256)||(41004204-41004241)
chr2 (276-336)||(4897664-4897724)
chr2 (276-336)||(4945058-4945118)
chr2 (391-439)||(12296222-12296270)
chr2 (352-423)||(1143068-1143139)
chr2 (352-423)||(1943730-1943801)
chr2 (352-423)||(5255689-5255760)
chr2 (352-423)||(7418650-7418721)
chr2 (352-423)||(11121140-11121211)
chr2 (352-423)||(11865097-11865168)
chr2 (352-423)||(13197455-13197526)
chr2 (352-423)||(15404518-15404589)
chr2 (221-256)||(19034673-19034708)
chr2 (352-423)||(20727668-20727739)
chr2 (352-423)||(34062475-34062546)
chr2 (352-423)||(34883658-34883729)
chr2 (352-423)||(36130838-36130909)
chr2 (352-423)||(37229596-37229667)
chr2 (352-423)||(38121321-38121392)
chr2 (352-423)||(44436295-44436366)
chr2 (352-423)||(45474471-45474542)
chr2 (298-336)||(14493734-14493772)
chr2 (370-423)||(3060431-3060484)
chr2 (218-255)||(6027615-6027652)
chr2 (378-423)||(19353373-19353418)
chr2 (378-423)||(22302597-22302642)
chr2 (370-423)||(26322103-26322156)
chr2 (220-256)||(1748380-1748416)
chr2 (387-423)||(1859738-1859774)
chr2 (220-256)||(9701069-9701105)
chr2 (292-336)||(12296350-12296394)
chr2 (276-336)||(12969567-12969627)
chr2 (378-426)||(16807069-16807117)
chr2 (378-426)||(16846350-16846398)
chr2 (387-423)||(30466316-30466352)
chr2 (355-423)||(32121103-32121171)
chr2 (391-423)||(36556207-36556239)
[»] chr7 (41 HSPs)
chr7 (339-439)||(28017086-28017186)
chr7 (276-336)||(19292894-19292954)
chr7 (339-439)||(31137198-31137298)
chr7 (338-426)||(40121062-40121150)
chr7 (352-423)||(9140343-9140414)
chr7 (352-423)||(26842927-26842998)
chr7 (351-423)||(29642954-29643026)
chr7 (352-423)||(1275543-1275614)
chr7 (352-423)||(6387481-6387552)
chr7 (352-423)||(7607444-7607515)
chr7 (352-423)||(8291059-8291130)
chr7 (352-423)||(8612385-8612456)
chr7 (221-256)||(12930581-12930616)
chr7 (352-423)||(21119714-21119785)
chr7 (352-423)||(23320811-23320882)
chr7 (352-423)||(25247501-25247572)
chr7 (221-256)||(27529489-27529524)
chr7 (352-423)||(28016356-28016427)
chr7 (352-423)||(31200174-31200245)
chr7 (352-423)||(31458153-31458224)
chr7 (352-423)||(32872185-32872256)
chr7 (352-423)||(34978887-34978958)
chr7 (352-423)||(36697941-36698012)
chr7 (352-423)||(39871423-39871494)
chr7 (352-423)||(40300386-40300457)
chr7 (352-423)||(43440920-43440991)
chr7 (352-423)||(47323339-47323410)
chr7 (378-423)||(16957816-16957861)
chr7 (378-423)||(20950849-20950894)
chr7 (219-256)||(21119821-21119858)
chr7 (92-145)||(28900768-28900821)
chr7 (92-149)||(47795848-47795905)
chr7 (391-431)||(2887765-2887805)
chr7 (352-423)||(10538941-10539010)
chr7 (276-336)||(19845590-19845650)
chr7 (220-256)||(22991746-22991782)
chr7 (276-336)||(32699625-32699685)
chr7 (98-150)||(33672975-33673027)
chr7 (355-423)||(36646447-36646515)
chr7 (92-148)||(38500051-38500107)
chr7 (387-423)||(43093218-43093254)
[»] chr4 (54 HSPs)
chr4 (340-439)||(43456296-43456393)
chr4 (360-426)||(5733805-5733870)
chr4 (339-439)||(10497509-10497609)
chr4 (352-423)||(28298180-28298251)
chr4 (352-423)||(31937232-31937303)
chr4 (352-423)||(45742616-45742687)
chr4 (352-423)||(54676704-54676775)
chr4 (352-426)||(50352220-50352294)
chr4 (370-423)||(25124055-25124108)
chr4 (352-417)||(29460521-29460586)
chr4 (292-407)||(30191788-30191896)
chr4 (351-423)||(20391248-20391320)
chr4 (217-256)||(3085441-3085480)
chr4 (352-423)||(8344061-8344132)
chr4 (352-423)||(9328050-9328121)
chr4 (352-423)||(10588230-10588301)
chr4 (352-423)||(15241635-15241706)
chr4 (352-423)||(19281901-19281972)
chr4 (352-423)||(20761635-20761706)
chr4 (352-423)||(20768026-20768097)
chr4 (352-423)||(29427645-29427716)
chr4 (352-423)||(30771678-30771749)
chr4 (352-423)||(32032801-32032872)
chr4 (352-423)||(32899049-32899120)
chr4 (352-423)||(33413674-33413745)
chr4 (352-423)||(33501739-33501810)
chr4 (352-423)||(34273029-34273100)
chr4 (352-423)||(35675730-35675801)
chr4 (352-423)||(36392010-36392081)
chr4 (352-423)||(37639698-37639769)
chr4 (352-415)||(38027288-38027351)
chr4 (352-415)||(38405643-38405706)
chr4 (352-423)||(39670881-39670952)
chr4 (352-423)||(41191346-41191417)
chr4 (352-423)||(43387803-43387874)
chr4 (352-423)||(44294945-44295016)
chr4 (352-423)||(47228538-47228609)
chr4 (352-423)||(47311446-47311517)
chr4 (221-256)||(47683351-47683386)
chr4 (352-423)||(51536323-51536394)
chr4 (352-423)||(53276996-53277067)
chr4 (352-423)||(55014776-55014847)
chr4 (352-423)||(55562936-55563007)
chr4 (353-423)||(375581-375651)
chr4 (218-256)||(5733902-5733940)
chr4 (370-423)||(18018832-18018885)
chr4 (378-423)||(55777075-55777120)
chr4 (378-423)||(55841255-55841300)
chr4 (220-256)||(625707-625743)
chr4 (213-245)||(5734379-5734411)
chr4 (339-419)||(22130322-22130401)
chr4 (220-256)||(26889901-26889937)
chr4 (208-256)||(37776739-37776787)
chr4 (157-213)||(39691196-39691252)
[»] scaffold0072 (1 HSPs)
scaffold0072 (339-437)||(47298-47396)
[»] scaffold0074 (1 HSPs)
scaffold0074 (339-424)||(56067-56152)
[»] scaffold0107 (1 HSPs)
scaffold0107 (220-256)||(48916-48952)
[»] scaffold0649 (1 HSPs)
scaffold0649 (352-423)||(4108-4179)
[»] scaffold0339 (1 HSPs)
scaffold0339 (352-423)||(6950-7021)
[»] scaffold0280 (1 HSPs)
scaffold0280 (352-423)||(13374-13445)
[»] scaffold0202 (1 HSPs)
scaffold0202 (352-423)||(9564-9635)
[»] scaffold0172 (1 HSPs)
scaffold0172 (352-423)||(18510-18581)
[»] scaffold0097 (1 HSPs)
scaffold0097 (352-423)||(31497-31568)
[»] scaffold0011 (1 HSPs)
scaffold0011 (352-423)||(19769-19840)
[»] scaffold0368 (1 HSPs)
scaffold0368 (351-423)||(8372-8444)
[»] scaffold0308 (2 HSPs)
scaffold0308 (352-417)||(5102-5167)
scaffold0308 (352-417)||(14165-14230)
[»] scaffold0250 (1 HSPs)
scaffold0250 (370-423)||(9236-9289)
[»] scaffold0161 (1 HSPs)
scaffold0161 (370-423)||(3611-3664)
[»] scaffold0473 (1 HSPs)
scaffold0473 (391-439)||(1929-1977)
[»] scaffold0457 (1 HSPs)
scaffold0457 (220-256)||(4403-4439)
[»] scaffold0237 (1 HSPs)
scaffold0237 (220-256)||(6350-6386)
[»] scaffold0049 (1 HSPs)
scaffold0049 (214-254)||(105-145)
[»] scaffold0047 (1 HSPs)
scaffold0047 (351-423)||(61663-61735)


Alignment Details
Target: chr1 (Bit Score: 148; Significance: 7e-78; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 43589677 - 43589460
Alignment:
Q  12 gacttccagcactaattaatttgtgcgttaagcctttgtcatcatcgcagcataaaaataatggacatgtttggataaacaacaacttatttacagttta 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43589677 gacttccagcactatttaatttgtgcgttaagcctttgtcatcatcgcagcataaaaataatggacatgtttggataaacaacaacttatttacagttta 43589578  T
Q  112 tagcataagcctttattatgataagcacttatgtataagtttg---------------tagcaaaagataaattaatgttgaaattttgtcgcatatgct 196  Q
    |||||||||||||||||||||||||||||||||||||||||||               ||||||| |||||||||||||||||||||||| | |||||||    
T  43589577 tagcataagcctttattatgataagcacttatgtataagtttgtacaaactattgttatagcaaatgataaattaatgttgaaattttgtggtatatgct 43589478  T
Q  197 ataagttgcttttataat 214  Q
    | ||||||||||||||||    
T  43589477 acaagttgcttttataat 43589460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 26768579 - 26768627
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26768579 ttgtaaaaacaataacaattacaaacaaatttattatcatttttaattt 26768627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 46084009 - 46084109
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||||||  |||||||||||||  || ||||||  ||||| || ||| |||||||| ||||| |||||||||||||||||||||||| ||| ||||    
T  46084009 attaaatactatgttgaaaacatacaagaatcctcttgcttaaaagataaaattgtaaaagcaatattaattacaaacaaatttattatcactttcaatt 46084108  T
Q  439 t 439  Q
    |    
T  46084109 t 46084109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 433
Target Start/End: Complemental strand, 18114366 - 18114272
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttt 433  Q
    |||||||| || |||||||||||| | ||| ||||| | ||||| || ||| ||||||||||||||  |||||||||||| ||||||| ||||||    
T  18114366 attaaatattatattgaaaacatatattaaccctctctcttaaaggataaaattgtaaaaacaatagaaattacaaacaagtttattaccatttt 18114272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 15624787 - 15624687
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    ||||||||||| | ||| ||||||||||||  |||||| ||||| || ||| || | |||| |||| ||||||||||||||||||||| || ||| ||||    
T  15624787 attaaatactataatgacaacatacactaactctctttcttaaaggataaaattatcaaaataatagtaattacaaacaaatttattaccactttcaatt 15624688  T
Q  439 t 439  Q
    |    
T  15624687 t 15624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 37589096 - 37589167
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  37589096 ttgaaaacataaaccaaccctctttcttaaaagataaaattgtaaaaacaatattaattacaaacatattta 37589167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 33541897 - 33541839
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||||||||||| |||||||||||| |||  ||||| ||||||||| ||||||||||||    
T  33541897 aacaacttatttgcagtttatagcacaagtgtttatcatgataagcgcttatgtataag 33541839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 27255467 - 27255528
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||||| ||| |||||||||||||| | ||| ||||||||||||||| |||||| |||||    
T  27255467 ttaaatgataaaattgtaaaaacaatagtgattgcaaacaaatttattaccattttcaattt 27255528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 34931381 - 34931340
Alignment:
Q  215 aatttatactacctccgtccttaattataggatccttttgaa 256  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  34931381 aatttgtactacctccgtccctaattataggatccttttgaa 34931340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 24855436 - 24855508
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  24855436 attgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 24855508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 26547680 - 26547732
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  26547680 ctctttcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 26547732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 26768457 - 26768501
Alignment:
Q  292 atttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||    
T  26768457 atttctaagtacattaattaattctttaccaacatacccctattt 26768501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 33337098 - 33337066
Alignment:
Q  220 atactacctccgtccttaattataggatccttt 252  Q
    |||||||||||||||||||||||||||||||||    
T  33337098 atactacctccgtccttaattataggatccttt 33337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 42872216 - 42872144
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  42872216 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 42872144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 43589400 - 43589340
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||| |||||| | |||||  | |||||||| |||||||||||||||||||||||||||    
T  43589400 ataagaaccctttgatatttcacagtacattaattaattctttactaacatacccctattt 43589340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 45038225 - 45038173
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  45038225 ctctttcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 45038173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 943518 - 943447
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  943518 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 943447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 8104171 - 8104100
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8104171 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8104100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 11741553 - 11741624
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  11741553 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 11741624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 11907109 - 11907038
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  11907109 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 11907038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 15892445 - 15892374
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || ||  |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  15892445 ttgaaaacataaaccaacactctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 15892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 16456792 - 16456863
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  16456792 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 16456863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 25284104 - 25284069
Alignment:
Q  221 tactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| |||||||||||||||||||||    
T  25284104 tactacctccgtccctaattataggatccttttgaa 25284069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28885984 - 28885913
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  28885984 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 28885913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28888304 - 28888233
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  28888304 ttgaaaacataagccaaccctctttcttaaaggaaaaaattgtaaaaacaatagtaattacaaacatattta 28888233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 46075749 - 46075678
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  46075749 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 46075678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 47300774 - 47300703
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  47300774 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 47300703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 50246811 - 50246740
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  50246811 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaatttta 50246740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 51422308 - 51422237
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || ||||| | |||||  | ||| ||||||||||||||||||||||||||| |||||    
T  51422308 ttgaaaacataaaccaaccctctctcttaaagcataaaattgtaaaaacaataataattacaaacatattta 51422237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 52431055 - 52430984
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  52431055 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtcattacaaacaacttta 52430984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 13274617 - 13274587
Alignment:
Q  224 tacctccgtccttaattataggatccttttg 254  Q
    |||||||||||||||||||||||||||||||    
T  13274617 tacctccgtccttaattataggatccttttg 13274587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 16575973 - 16575907
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaa 418  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | |||||||||||    
T  16575973 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaa 16575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 6090037 - 6089996
Alignment:
Q  215 aatttatactacctccgtccttaattataggatccttttgaa 256  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  6090037 aatttgtactacctccgtccctaattataggacccttttgaa 6089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 9715534 - 9715587
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  9715534 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 9715587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 15290223 - 15290186
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||| | |||||||||||||||||||    
T  15290223 tatactacctccgtcccttattataggatccttttgaa 15290186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 23530719 - 23530772
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  23530719 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 23530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 25228370 - 25228423
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  25228370 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 25228423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 28052187 - 28052224
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  28052187 tatactacctccgtccttaattataagattcttttgaa 28052224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 30761039 - 30761140
Alignment:
Q  338 tattaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaat 437  Q
    |||||||||| |  |||||||||||||||||  || | | |||||  | ||| ||||||||||||||  ||||||||||||| |||||| || ||| |||    
T  30761039 tattaaataccatgttgaaaacatacactaactctttctcttaaagaataaaattgtaaaaacaatagcaattacaaacaaacttattaccactttcaat 30761138  T
Q  438 tt 439  Q
    ||    
T  30761139 tt 30761140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 32906822 - 32906777
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| |||||||||||||| ||||||||||||||||||    
T  32906822 ttaaaggataaaattgtaaaaacaatagtaattacaaacaaattta 32906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 423
Target Start/End: Original strand, 52001540 - 52001569
Alignment:
Q  394 taaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||||||||||||||||||||    
T  52001540 taaaaacaataataattacaaacaaattta 52001569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 9424910 - 9424998
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattat 427  Q
    |||||||| ||  ||||||||||| | |||  |||| | ||||| || ||| |||||||||||||| |||||| ||||||| |||||||    
T  9424910 attaaatattatgttgaaaacataaaataattctctctcttaaaagataaaattgtaaaaacaatattaattataaacaaacttattat 9424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 13343948 - 13344000
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  13343948 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 13344000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 21630952 - 21630916
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||| |||||||||||| |||||    
T  21630952 aaatttgtaaaaacaatagtaattacaaacatattta 21630916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 22567064 - 22567100
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttga 255  Q
    |||||||||||||||| |||||||| |||||||||||    
T  22567064 tatactacctccgtccctaattataagatccttttga 22567100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23530541 - 23530577
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||||||||| || |||||||||    
T  23530541 atactacctccgtccttaattataagacccttttgaa 23530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 32149189 - 32149121
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| |||||  |||| | ||||| || ||| |||||||||||||| ||||||||||||| ||||    
T  32149189 aaaacataaactaactctctattttaaaagataaaattgtaaaaacaatagtaattacaaacaacttta 32149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 32906704 - 32906740
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  32906704 atactacctccgtccctaattatagggtccttttgaa 32906740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 35160346 - 35160314
Alignment:
Q  224 tacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||||| ||||||||||||    
T  35160346 tacctccgtccttaattataagatccttttgaa 35160314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 35693259 - 35693299
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatcatt 431  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  35693259 ttgtaaaaacaatagtatttacaaacaaatttattaccatt 35693299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 35693363 - 35693327
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  35693363 atactacctccgtccctaattataggacccttttgaa 35693327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 38261515 - 38261567
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  38261515 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 38261567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 38505855 - 38505915
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||| ||||| | ||||| ||||||||||| || |||||||| ||||||||| |||||    
T  38505855 ataagactcctttgatatttccaaatacattaattatttctttaccaacatacccttattt 38505915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 38613531 - 38613591
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||| | |||||||| |||||||| || ||||||||  |||| |||||||||    
T  38613531 ataagaccccttttatatttctaactacattaattatttctttacatacatgcccctattt 38613591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 43589315 - 43589279
Alignment:
Q  338 tattaaatactacattgaaaacatacactaagcctct 374  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  43589315 tattatatactacattgaaaacatacactaaccctct 43589279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 16776640 - 16776541
Alignment:
Q  340 ttaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||||||||||||||||||||||||| || || | ||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16776640 ttaaatactacattgaaaacatacactaaccccctctcttaaaggacaaatttgtaaaaacaataataattacaaacaaatttattaccacttttaattt 16776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 16776781 - 16776680
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatg-acaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaat 437  Q
    |||||||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  16776781 attaaatactacattgaaaacatacactaaccctctctcttaaaaggacaaatttgtaaaaacaatagtaattacaaacaaatttattaccacttttaat 16776682  T
Q  438 tt 439  Q
    ||    
T  16776681 tt 16776680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 29383156 - 29383244
Alignment:
Q  338 tattaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||||| |||||||||||| |||||  |||| | || || || ||| ||||||||||||||||||||||||||||||||||||    
T  29383156 tattaaatactatattgaaaacataaactaactctctctcttcaaggataaaattgtaaaaacaataataattacaaacaaatttatta 29383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 18657586 - 18657651
Alignment:
Q  360 atacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||||||| ||||  | |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18657586 atacactaaccctcgcttttaaatgataaatt-gtaaaaacaataataattacaaacaaatttatta 18657651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 35938517 - 35938591
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||||||||||   ||| | ||||| || ||| ||||||||||||||| ||||||||||||||||||||    
T  35938517 ttgaaaacatacactaactatctctcttaaaggataaaattgtaaaaacaataacaattacaaacaaatttatta 35938591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 20084742 - 20084681
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||| || ||| ||||||||||||||| |||||||||||||||||||| || |||||||||    
T  20084742 ttaaaggataaaattgtaaaaacaataacaattacaaacaaatttattaacacttttaattt 20084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 13702750 - 13702650
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||||||  ||||||||||||||||| || || | ||||| || ||| |||| |||| ||||  ||||||||||||||||||| ||| ||| ||||    
T  13702750 attaaatactatgttgaaaacatacactaaccccctctcttaaaggataaaattgttaaaagaatagcaattacaaacaaatttattctcactttcaatt 13702651  T
Q  439 t 439  Q
    |    
T  13702650 t 13702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 26221444 - 26221515
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| ||||||||||||| ||||    
T  26221444 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtaattacaaacaacttta 26221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 32569153 - 32569224
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||||| ||||||||||| ||||    
T  32569153 ttgaaaacataaactaaccttctttcttaaatgataaaattgtaaaaataataatgattacaaacaacttta 32569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 28796021 - 28795963
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||||||||||||||| |||||||| || | ||||| ||||||| ||||||||||||||    
T  28796021 aacaacttatttacagcttatagcacaaacatttatcatgataaacacttatgtataag 28795963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 8322223 - 8322186
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8322223 tatactacctccgtccttaattatagggtccttttgaa 8322186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 45513370 - 45513411
Alignment:
Q  215 aatttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  45513370 aattgatactacctccgtccttaattataggacccttttgaa 45513411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 54866429 - 54866494
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaaca 417  Q
    |||||||||||  | || ||||||||||||| || ||| |||||||||||||| ||||||||||||    
T  54866429 ttgaaaacataagccaaccctctttattaaaagataaaattgtaaaaacaatagtaattacaaaca 54866494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 13809547 - 13809583
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||| |||||||||||||||||||||||||    
T  13809547 atactacctccatccttaattataggatccttttgaa 13809583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 30819934 - 30819994
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||| | ||||| || |||||||| || |||||||||||||||||| |||||    
T  30819934 ataagacccctttgatatttccaagtacattaattatttctttactaacatacccttattt 30819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 439
Target Start/End: Original strand, 38364343 - 38364410
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||| |||||||||| || |||||||||    
T  38364343 ctctttcttaaaagataaaattgtaaaaacaatagtaattacaaataaatttatta-cacttttaattt 38364410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 41750926 - 41750962
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41750926 atactacctccgtccttaattatatgatccttttgaa 41750962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 45745933 - 45746005
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  45745933 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 45746005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 49383711 - 49383643
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| || || ||||| ||||||| || ||| |||||||||||||| |||||||||||| |||||    
T  49383711 aaaacataaaccaaccctctctattaaaggataaaattgtaaaaacaatagtaattacaaacatattta 49383643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 7051601 - 7051530
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  7051601 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 7051530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 7181506 - 7181577
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  7181506 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 7181577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 7251163 - 7251092
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  7251163 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 7251092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 10656847 - 10656918
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  10656847 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 10656918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 20848988 - 20849059
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  20848988 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 20849059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 23308094 - 23308165
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| ||||| | ||||| || ||| ||||||||| |||| |||||||||||| |||||    
T  23308094 ttgaaaacataaactaaccctctctcttaaaggataaaattgtaaaaataatagtaattacaaacatattta 23308165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 30040898 - 30040827
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  30040898 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 30040827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 31531292 - 31531221
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  31531292 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 31531221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 33212552 - 33212623
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  33212552 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 33212623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 40919110 - 40919181
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||   ||| ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  40919110 ttgaaaacataagataaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 40919181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 42390785 - 42390714
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| |||||  |||| | |||||||| ||| ||| |||||||||| |||||||||||| |||||    
T  42390785 ttgaaaacataaactaactctctctcttaaatgataaaattgcaaaaacaatagtaattacaaacatattta 42390714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 43686657 - 43686728
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  43686657 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 43686728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 43868259 - 43868330
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  43868259 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 43868330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 45252929 - 45253000
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  45252929 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 45253000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 49127079 - 49127008
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  49127079 ttgaaaacataaactaatcttcttttttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 49127008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 51489523 - 51489594
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||  ||||| | ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  51489523 ttgaaaacataaactatccctctctcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 51489594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 52673343 - 52673414
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  52673343 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 52673414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 53686878 - 53686807
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  53686878 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 53686807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 54107509 - 54107580
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  54107509 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 54107580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 16776924 - 16776890
Alignment:
Q  221 tactacctccgtccttaattataggatccttttga 255  Q
    |||||||||||||| ||||||||||||||||||||    
T  16776924 tactacctccgtccctaattataggatccttttga 16776890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 18657721 - 18657683
Alignment:
Q  218 ttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  18657721 ttatactacctctgtccttaattataggacccttttgaa 18657683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 19983661 - 19983719
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||||||||||| || ||||||||||||   |||||||||||||||  |||||||||||    
T  19983661 aacaacttatttgcaatttatagcataattgtttattatgataagcgtttatgtataag 19983719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 1111384 - 1111421
Alignment:
Q  217 tttatactacctccgtccttaattataggatccttttg 254  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  1111384 tttatactacctccgtccctaattataggagccttttg 1111421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 4759213 - 4759160
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  4759213 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 4759160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 14759134 - 14759097
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| | |||||||||||||||||||||    
T  14759134 tatactacctccgttcataattataggatccttttgaa 14759097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 27646038 - 27646071
Alignment:
Q  213 ataatttatactacctccgtccttaattatagga 246  Q
    |||||||||||||||||||||| |||||||||||    
T  27646038 ataatttatactacctccgtccctaattatagga 27646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 30574107 - 30574033
Alignment:
Q  74 ggacatgtttggataaacaacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||| |||||||||||||| ||  | |||| ||| ||||| ||||||| ||||| ||||||||| ||||||||||||    
T  30574107 ggacctgtttggataaacacca--taatttgcagcttatatcataagcatttatcatgataagcgcttatgtataag 30574033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 31186938 - 31186983
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  31186938 ttaaaggataaaattgtaaaaacaataataattacaaacatattta 31186983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 46845355 - 46845302
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  46845355 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 46845302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 50517377 - 50517332
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  50517377 ttaaaggataaaattgtaaaaacaataataattacaaacatattta 50517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 52177797 - 52177834
Alignment:
Q  218 ttatactacctccgtccttaattataggatccttttga 255  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  52177797 ttatactacctccgtccctaattataggacccttttga 52177834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 6784637 - 6784689
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  6784637 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 6784689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 9780082 - 9780050
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||||||||||||| ||||    
T  9780082 ttgtaaaaacaataataattacaaacaacttta 9780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 16776868 - 16776808
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||||||||   ||||| || |||||||| ||||||||||| || ||||||||||||    
T  16776868 ataagacccctttgctatttccaagtacattaattaattctttaccaatatacccctattt 16776808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 18658160 - 18658192
Alignment:
Q  213 ataatttatactacctccgtccttaattatagg 245  Q
    |||||||||||||||||||||| ||||||||||    
T  18658160 ataatttatactacctccgtccctaattatagg 18658192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 19350223 - 19350187
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| |||||||||||||||||||||||| |||||    
T  19350223 aaatttataaaaacaataataattacaaacatattta 19350187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 20621424 - 20621460
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  20621424 atactacctccgtccctaattataggacccttttgaa 20621460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 24813601 - 24813637
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  24813601 atactacctccgtccctaattataagatccttttgaa 24813637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 29454825 - 29454789
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttga 255  Q
    ||||||||||||||||||||||||| || ||||||||    
T  29454825 tatactacctccgtccttaattataagacccttttga 29454789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 38364222 - 38364282
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||||| ||||  ||||||||||| ||||| ||||| ||||| ||| |||||    
T  38364222 ataagacccctttaatattttcaaatacattaattaattatttaccaacatgcccttattt 38364282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 41392722 - 41392690
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||| ||||||||||||||||||    
T  41392722 ttgtaaaaacaatagtaattacaaacaaattta 41392690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 42801664 - 42801592
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| |||  |||| ||||||| ||||| || ||| || ||||||||||| |||||||||||| |||||    
T  42801664 attgaaaatataagctaaccctctttcttaaaggataaaattataaaaacaatagtaattacaaacatattta 42801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 47008483 - 47008423
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||||||||   ||||| || |||||||| || |||||||||||||||||| |||||    
T  47008483 ataagacccctttggtatttccaagtacattaattatttctttactaacatacccttattt 47008423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 47067125 - 47067161
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||| |||||||||||| |||||    
T  47067125 aaatttgtaaaaacaatagtaattacaaacatattta 47067161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 49383518 - 49383570
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  49383518 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 49383570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 50433251 - 50433199
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  50433251 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 50433199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 24260849 - 24260748
Alignment:
Q  338 tattaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaat 437  Q
    ||||||||||||  |||||||||||||||||  |||| | ||||| || | | |||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  24260849 tattaaatactatcttgaaaacatacactaattctctcttttaaaggatagaattgtaaaagcaatagtaattacaaacaaatttattaccatttttaat 24260750  T
Q  438 tt 439  Q
    ||    
T  24260749 tt 24260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 440 - 494
Target Start/End: Original strand, 1004575 - 1004629
Alignment:
Q  440 gagcaatgctatcaacaatcgctccctcactctctcttaaccactctttgttcca 494  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  1004575 gagcaatgctatcgacaatcgctctctcactctctcttaaccactctttgttcca 1004629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 39970113 - 39970198
Alignment:
Q  341 taaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||| || |||||||||||||||||| ||||| | ||||| || | | ||||||||||||| | ||||||||||||||||||||    
T  39970113 taaatattatattgaaaacatacactaaccctctcttttaaaggatacaattgtaaaaacaatgacaattacaaacaaatttatta 39970198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 19700887 - 19700803
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||||||||||| ||| | | ||||| || ||| ||||||||||| |||||||||||||||||| ||||| || ||| |||||    
T  19700887 aaaacatacactaaccctttctcttaaaggataaaattgtaaaaacagtaataattacaaacaaatatattaccactttcaattt 19700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 14625683 - 14625754
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  14625683 ttgaaaacataagccaatcctctttcttaaaggataaaattgtaaaaacaataataattacaaacatattta 14625754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 19715696 - 19715637
Alignment:
Q  380 aaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||| || ||| |||||    
T  19715696 aaatgataaaattgtaaaaacaataataattacaaacaaatatattaccactttcaattt 19715637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 25056782 - 25056711
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || ||  |||| | ||||| || ||| |||||||||||||||||||||||||||||||||    
T  25056782 ttgaaaacataaacaaactctctcttttaaaggataaaattgtaaaaacaataataattacaaacaaattta 25056711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 30140238 - 30140309
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  30140238 ttgaaaacataaaccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 30140309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 439
Target Start/End: Original strand, 16894061 - 16894123
Alignment:
Q  377 attaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||| || ||| |||||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  16894061 attaaaggataaaattgtaaaaacaatagtaattacaaacaattttattaccattttcaattt 16894123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 31618990 - 31619027
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31618990 tatactacctccgtccttaattataggatccatttgaa 31619027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 42486256 - 42486293
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatc 428  Q
    |||||||||||||| |||||||||||||||||||||||    
T  42486256 ttgtaaaaacaatagtaattacaaacaaatttattatc 42486293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 16448635 - 16448563
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  16448635 attgaaaacataagccaaccctcttttttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 16448563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 24992670 - 24992742
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  24992670 attgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 24992742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 50976 - 50905
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  50976 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 50905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 1774498 - 1774569
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  1774498 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 1774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 2786260 - 2786318
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaa 398  Q
    ||||||||||| |||||||| ||||| ||| ||||||| ||||| |||||||||||||||    
T  2786260 attaaatactatattgaaaa-atacagtaaccctctttcttaaaagacaaatttgtaaaa 2786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 5162460 - 5162531
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  5162460 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 5162531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 5774205 - 5774276
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  5774205 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 5774276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 8251814 - 8251743
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8251814 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8251743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 8948232 - 8948161
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8948232 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8948161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 422
Target Start/End: Complemental strand, 15021236 - 15021169
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattt 422  Q
    |||||||||||||| | ||| | ||||| |  ||| ||||||||||||||| ||||||||||||||||    
T  15021236 aaaacatacactaatcatctctcttaaaggttaaaattgtaaaaacaataacaattacaaacaaattt 15021169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 16117332 - 16117261
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  16117332 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 16117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 16125591 - 16125520
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  16125591 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 16125520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 18455876 - 18455947
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  18455876 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 18455947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 18754301 - 18754372
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  18754301 ttgaaaacataaactaaccttcttttttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 18754372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 21652363 - 21652292
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| ||||| | ||||| || ||| | ||||||||||||| |||||||||||| ||||    
T  21652363 ttgaaaacataaactaaccctctcttttaaaggataaaatggtaaaaacaataaaaattacaaacaacttta 21652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 29598380 - 29598451
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  29598380 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 29598451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 426
Target Start/End: Original strand, 30512959 - 30512994
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||||||| |||||||||||||||||||||    
T  30512959 ttgtaaaaacaatagtaattacaaacaaatttatta 30512994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 33865279 - 33865318
Alignment:
Q  217 tttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  33865279 tttatactacctccgtccctaattatagggtccttttgaa 33865318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 34490673 - 34490744
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34490673 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 35504461 - 35504390
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  35504461 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 35504390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 36661807 - 36661736
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  36661807 ttgaaaacataaactaaccttcttttttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 36661736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 38183447 - 38183376
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  38183447 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 38183376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 38878877 - 38878948
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  38878877 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 38878948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 38967299 - 38967370
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||| ||| ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  38967299 ttgaaaacataagccaaccctttttcttaaaggataaaattgtaaaaacaataataattacaaacatattta 38967370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 14956484 - 14956426
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||||||||||| ||| |||||||| || |  |||| ||||||||||||||||||||||    
T  14956484 aacaacttatttgcagcttatagcacaatcgcttatcatgataagcacttatgtataag 14956426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 23487371 - 23487325
Alignment:
Q  210 ataataatttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||| ||| |||||||||||||||| ||||||||||| |||||||||    
T  23487371 ataaaaatatatactacctccgtccctaattataggacccttttgaa 23487325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 12802604 - 12802645
Alignment:
Q  214 taatttatactacctccgtccttaattataggatccttttga 255  Q
    ||||||||||||||||||||| |||||||| || ||||||||    
T  12802604 taatttatactacctccgtccctaattataagacccttttga 12802645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 29806104 - 29806039
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaaca 417  Q
    ||||||||||| || || ||||| | ||||| || ||| |||||||||||||| ||||||||||||    
T  29806104 ttgaaaacataaaccaaccctctctcttaaaggataaaattgtaaaaacaatagtaattacaaaca 29806039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 35143377 - 35143332
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| |||||| |||||||||||||| |||||||||||| |||||    
T  35143377 ttaaaggacaaaattgtaaaaacaatagtaattacaaacatattta 35143332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 41589561 - 41589633
Alignment:
Q  79 tgtttggataaacaacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataagtt 152  Q
    |||||||||||| |  ||||||||| ||| |||||||| |||| ||||| ||||||||| ||||| ||||||||    
T  41589561 tgtttggataaaaataaacttatttgcagcttatagcacaagcatttatcatgataagcgcttat-tataagtt 41589633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 13568948 - 13568908
Alignment:
Q  215 aatttatactacctccgtccttaattataggatccttttga 255  Q
    |||| |||||||||||||||||||||||| || ||||||||    
T  13568948 aattgatactacctccgtccttaattataagacccttttga 13568908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Original strand, 35203030 - 35203062
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||||||||||||||||| |||||    
T  35203030 ttgtaaaaacaataataattacaaacatattta 35203062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Original strand, 40855991 - 40856023
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||||||||||||| ||||    
T  40855991 ttgtaaaaacaataataattacaaacaatttta 40856023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 42985398 - 42985326
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| || ||  |||| | ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  42985398 attgaaaacataaaccaactctctctcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 42985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 44747222 - 44747274
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  44747222 ctctttcttaaaagataaaattgtaaaaacaatagtaattacaaacatattta 44747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 45283645 - 45283601
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattt 422  Q
    ||||| || ||| ||||||||||||||||||||||||||| ||||    
T  45283645 ttaaaggataaaattgtaaaaacaataataattacaaacatattt 45283601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 2746438 - 2746351
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||||  |||||||||||  ||||  |||| | ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  2746438 attaaatactatgttgaaaacataagctaattctctctcttaaaggataaatttgtaaaaacaataataattacaaacaaatttatta 2746351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 8646087 - 8646015
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||||||||  |||||| |||||  |||||||||||||||||||| ||||| ||||||||||||    
T  8646087 attgaaaacatacactaactctctttcttaaagaacaaatttgtaaaaacaatagtaattgcaaacaaattta 8646015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 2665625 - 2665527
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaat 437  Q
    ||||||||||| |||||||||||||||||| |  || | |||||  | |||  |||||||||||||   |||||||||||||||||||||| |||||||    
T  2665625 attaaatactatattgaaaacatacactaacctactctcttaaagaataaaagtgtaaaaacaatagcgattacaaacaaatttattatcacttttaat 2665527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 287295 - 287224
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  287295 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 287224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 2090815 - 2090886
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  2090815 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 2090886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 10195875 - 10195804
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  10195875 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 10195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 15967043 - 15966972
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  15967043 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 15966972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 19419005 - 19418934
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  19419005 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 19418934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 25197308 - 25197379
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  25197308 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 25197379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 33487987 - 33488058
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  33487987 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 33488058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 255
Target Start/End: Complemental strand, 13011157 - 13011123
Alignment:
Q  221 tactacctccgtccttaattataggatccttttga 255  Q
    ||||||||||||||||||||||| |||||||||||    
T  13011157 tactacctccgtccttaattataagatccttttga 13011123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 13690612 - 13690542
Alignment:
Q  353 tgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  13690612 tgaaaacataagccaaccctctttcttaaaagataaaattgtaaaaacaatagtaattacaaacacattta 13690542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 11104733 - 11104778
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  11104733 ttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 11104778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 25045506 - 25045453
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  25045506 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 25045453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 31149985 - 31150022
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  31149985 tatactacctccgtccctaattataggacccttttgaa 31150022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 9341836 - 9341872
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttga 255  Q
    |||||||||||||||| |||||||| |||||||||||    
T  9341836 tatactacctccgtccctaattataagatccttttga 9341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 13866892 - 13866856
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  13866892 atactacctccgtccctaattataggacccttttgaa 13866856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 15498926 - 15498890
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  15498926 atactacctccgtccctaattataggacccttttgaa 15498890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 37206262 - 37206362
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||| ||  ||||||||||||||||| |  |||| ||||| || ||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  37206262 attaaatattatgttgaaaacatacactaacctgcttttttaaaggataaaattgtaaaaataatagtaattacaaataaatttattatcattttcaatt 37206361  T
Q  439 t 439  Q
    |    
T  37206362 t 37206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 7956530 - 7956469
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||| ||||||||||||||||||||  |||||| ||||||||||||||||| |||||||||    
T  7956530 ttaaaagacaaatttgtaaaaacaattgtaattaaaaacaaatttattatcacttttaattt 7956469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 37700236 - 37700326
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatca 429  Q
    ||||||||||| |||||||||||| |||||   ||| | ||||| || ||| |||||||||||||  | ||||||||||||||||||||||    
T  37700236 attaaatactatattgaaaacatatactaattttctctcttaaaggataaaattgtaaaaacaatggtgattacaaacaaatttattatca 37700326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 429
Target Start/End: Original strand, 16099376 - 16099461
Alignment:
Q  341 taaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatca 429  Q
    |||||||||  ||||||||||||||||| ||||  | ||||| || ||| ||||||||||||||| ||||||||| |||||||||||||    
T  16099376 taaatactatgttgaaaacatacactaaccctc--tcttaaaggataaaattgtaaaaacaataacaattacaaa-aaatttattatca 16099461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 8283989 - 8283918
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  |||| ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  8283989 ttgaaaacataagctaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 8283918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 33818900 - 33818821
Alignment:
Q  360 atacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||||| ||||||| |||||  | | | |||||||| ||||| |||||||||||||||||||||||| ||| |||||    
T  33818900 atacactaatcctctttcttaaagaatagaattgtaaaagcaatagtaattacaaacaaatttattatcactttcaattt 33818821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 10116764 - 10116825
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||| || ||| |||||    
T  10116764 ttaaatgataaaattgtaaaaacaatagttattacaaacaaatttattaccactttcaattt 10116825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 7940749 - 7940713
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7940749 atactacctccgtccctaattataggatccttttgaa 7940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 9438933 - 9438901
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||||||||||||||||||    
T  9438933 ttgtaaaaacaataataattacaaacaaattta 9438901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 426
Target Start/End: Original strand, 10561263 - 10561295
Alignment:
Q  394 taaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||||||||||||||||||||||||||    
T  10561263 taaaaacaataataattacaaacaaatttatta 10561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 16153137 - 16153065
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  16153137 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 16153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 16938056 - 16937937
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataagtttgtagcaaaagataaattaatgttgaaattttgtcgcat 191  Q
    ||||||||||||  || ||||| || |||  ||||| ||||||||||||||||||| |||||| |  |||||||||| ||| ||| || | || | | ||    
T  16938056 aacaacttatttgaagcttataacacaagtgtttatcatgataagcacttatgtattagtttgca-taaaagataaaataacgttaaattgtttttgtat 16937958  T
Q  192 atgctataagttgcttttata 212  Q
    ||||||||||||| |||||||    
T  16937957 atgctataagttgtttttata 16937937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 35039152 - 35039224
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| || ||  |||| | || ||||| |||||||||||||||||| |||||||||||| |||||    
T  35039152 attgaaaacataaaccaactctctctcttgaatgataaatttgtaaaaacaatagtaattacaaacatattta 35039224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 1266105 - 1266176
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  1266105 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 1266176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 4753099 - 4753028
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  4753099 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 4753028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 6673109 - 6673038
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  6673109 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 6673038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 9065063 - 9065134
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  9065063 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 9065134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 9264129 - 9264200
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  9264129 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 9264200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 13862876 - 13862805
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  13862876 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 13862805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 14619405 - 14619476
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  14619405 ttgaaaacataagccaaccctctttcttaaaagataaaattgtaaaaacaatagtaattacaaacatattta 14619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 15521823 - 15521752
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  15521823 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 15521752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 17674539 - 17674468
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  17674539 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 17674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 22527848 - 22527919
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  22527848 ttgaaaacataaactaaccttcttttttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 22527919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 25600941 - 25600870
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  25600941 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 25600870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 30182996 - 30183067
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  30182996 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 30183067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 31889049 - 31889120
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  31889049 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 31889120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 34662360 - 34662431
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34662360 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34662431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 39984927 - 39984998
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  39984927 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 39984998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 4984997 - 4984931
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaa 418  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | |||||||||||    
T  4984997 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaa 4984931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 7319200 - 7319142
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||| ||||||||||| |||||||| ||||  |||| |||||||||||||||| |||||    
T  7319200 aacagcttatttacagcttatagcacaagcgcttatcatgataagcacttatgcataag 7319142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 13335430 - 13335520
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatca 429  Q
    |||||||||||  || ||| |||||| ||| | ||| |  |||| || ||| |||||||| ||||| ||||||||||||||||||||||||    
T  13335430 attaaatactatgttcaaagcatacaataatcatctctcgtaaaggataaaattgtaaaagcaatattaattacaaacaaatttattatca 13335520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 22657764 - 22657802
Alignment:
Q  217 tttatactacctccgtccttaattataggatccttttga 255  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  22657764 tttatactacctccgtccctaattataagatccttttga 22657802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 425
Target Start/End: Original strand, 26699459 - 26699545
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatt 425  Q
    |||||||||||  || |||||||||| ||| | ||| | |||||  | ||| || ||||||||||| ||||||||||||||||||||    
T  26699459 attaaatactatgttcaaaacatacaataatcatctctcttaaagcataaaattataaaaacaatattaattacaaacaaatttatt 26699545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 425
Target Start/End: Original strand, 26969192 - 26969278
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatt 425  Q
    |||||||||||  || |||||||||| ||| | ||| | |||||  | ||| || ||||||||||| ||||||||||||||||||||    
T  26969192 attaaatactatgttcaaaacatacaataatcatctctcttaaagcataaaattataaaaacaatattaattacaaacaaatttatt 26969278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 28041232 - 28041166
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaa 418  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | |||||||||||    
T  28041232 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaa 28041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 7956409 - 7956450
Alignment:
Q  215 aatttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||| ||||||| ||||||| |||||||||||||||||||||    
T  7956409 aattaatactacatccgtccataattataggatccttttgaa 7956450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 13759186 - 13759223
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||||||||||||  |||||||||    
T  13759186 tatactacctccgtccttaattatagggcccttttgaa 13759223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 15774926 - 15774873
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  15774926 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 15774873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 17108025 - 17107968
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataa 149  Q
    ||||| |||||||| |||||||||| ||   |||||||||||||||||| ||||||||    
T  17108025 aacaatttatttacggtttatagcacaaaagtttattatgataagcactaatgtataa 17107968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 32372493 - 32372561
Alignment:
Q  77 catgtttggataaacaacaacttatttacagtttatagcataagcctttattatgataagcacttatgtata 148  Q
    ||||||||||||||||   |||||||| ||| |||||||| ||||  |||| ||||||||| ||||||||||    
T  32372493 catgtttggataaaca---acttatttgcagcttatagcacaagcacttatcatgataagcccttatgtata 32372561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 32617639 - 32617586
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| |||||| ||||||||| |||| |||||||||||| |||||    
T  32617639 cctctttcttaaaggacaaaattgtaaaaataatagtaattacaaacatattta 32617586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 32703627 - 32703574
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgt 145  Q
    |||||||||||| ||| |||||||| |||| ||||| ||||||||| |||||||    
T  32703627 aacaacttatttgcagcttatagcacaagcatttatcatgataagcgcttatgt 32703574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 39105356 - 39105413
Alignment:
Q  93 acaacttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    ||||||||||| ||| ||||||||||||   |||| ||||||||| ||||||||||||    
T  39105356 acaacttatttgcagcttatagcataagtgcttatcatgataagcgcttatgtataag 39105413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 4194977 - 4194941
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  4194977 atactacctccgtccctaattataggacccttttgaa 4194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 11780929 - 11780981
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  11780929 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacacattta 11780981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 16285171 - 16285111
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||| | ||||| || |||||||| || |||||||| ||||||||| |||||    
T  16285171 ataagacccctttgatatttccaagtacattaattatttctttaccaacatacccttattt 16285111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 20186656 - 20186728
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| || ||  |||| | ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  20186656 attgaaaacataaaccaactctctctcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 20186728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 30117258 - 30117357
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||||||  ||||||||||||||||| ||| | | |||||  | ||| |||| |||||||||  ||||||||| |||||||||| || ||| ||||    
T  30117258 attaaatactatgttgaaaacatacactaatcctatcttttaaaatataaaattgt-aaaacaatagcaattacaaataaatttattaacactttcaatt 30117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 40643269 - 40643321
Alignment:
Q  371 ctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  40643269 ctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 40643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 12969654 - 12969741
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    |||||||||| ||||||||| |||||| ||  |||| | ||||| ||||||||| ||||||||||| |||||||| ||||||||||||    
T  12969654 attaaatactgcattgaaaatatacaccaactctctctcttaaaggacaaatttataaaaacaatagtaattacacacaaatttatta 12969741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 11083580 - 11083480
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||||||   |||||| ||||| ||| ||||| | ||||| || ||| ||||||||||||||  |||||||||||||||||||| || ||| ||||    
T  11083580 attaaatactatgctgaaaatatacattaaccctctctcttaaaggataaaattgtaaaaacaatagcaattacaaacaaatttattaccactttcaatt 11083481  T
Q  439 t 439  Q
    |    
T  11083480 t 11083480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 31751228 - 31751299
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  31751228 ttgaaaacataaaccaatcctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 31751299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 9833045 - 9833103
Alignment:
Q  92 aacaactta-tttacagtttatagcataagcctttattatgataagcacttatgtataa 149  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||||||| |||||||||||||    
T  9833045 aacaacttaatttacagcttatagcataagcatttatcatgataaacacttatgtataa 9833103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 4897530 - 4897448
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||||||||||  |||| | ||||| |||||| || ||||||||||| | |||||||||||||||||||  ||||| |||||    
T  4897530 aaaacatacactaa--ctctctcttaaaggacaaaattataaaaacaatagtgattacaaacaaatttattactattttcaattt 4897448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 4944924 - 4944842
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||||||||||  |||| | ||||| |||||| || ||||||||||| | |||||||||||||||||||  ||||| |||||    
T  4944924 aaaacatacactaa--ctctctcttaaaggacaaaattataaaaacaatagtgattacaaacaaatttattactattttcaattt 4944842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 26626767 - 26626844
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtat-aagtttgtagcaaaagataaa 168  Q
    |||||||||||| ||| |||||||||||||  |||| |||||||  |||||||||| || ||| ||||||||||||||    
T  26626767 aacaacttatttgcagcttatagcataagctcttatcatgataaatacttatgtataaactttatagcaaaagataaa 26626844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 41004241 - 41004204
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||| |||||||||||||||||||||    
T  41004241 tatactacctccgtccctaattataggatccttttgaa 41004204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 4897724 - 4897664
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||| |||| | ||||| || |||||||| ||||||||||| |||||||||||||||    
T  4897724 ataagacctctttgatatttcgaagtacattaattaattctttaccaacatacccctattt 4897664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 4945118 - 4945058
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||| |||| | ||||| || |||||||| ||||||||||| |||||||||||||||    
T  4945118 ataagacctctttgatatttcgaagtacattaattaattctttaccaacatacccctattt 4945058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 12296270 - 12296222
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||||||||||| | |||||||||||||||||||||| ||| |||||    
T  12296270 ttgtaaaaacaatagtgattacaaacaaatttattatcactttcaattt 12296222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 1143139 - 1143068
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || | ||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  1143139 ttgaaaacataaaccaaccatctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 1143068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 1943730 - 1943801
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  1943730 ttgaaaacataaactaaccatctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 1943801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 5255689 - 5255760
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  5255689 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 5255760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 7418650 - 7418721
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  7418650 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 7418721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 11121140 - 11121211
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||| ||  |||  | |||||||| ||| ||||||||||| || ||||||||||||||||||    
T  11121140 ttgaaaacatacaccaactctccctcttaaatgataaaattgtaaaaacagtagtaattacaaacaaattta 11121211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 11865168 - 11865097
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  11865168 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 11865097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 13197526 - 13197455
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  13197526 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaagttta 13197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 15404589 - 15404518
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  15404589 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 15404518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 19034708 - 19034673
Alignment:
Q  221 tactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| |||||||||||||||||||||    
T  19034708 tactacctccgtccctaattataggatccttttgaa 19034673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 20727739 - 20727668
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  20727739 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaacaacttta 20727668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 34062546 - 34062475
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34062546 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34062475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 34883729 - 34883658
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34883729 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34883658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 36130909 - 36130838
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  36130909 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 36130838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 37229596 - 37229667
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  37229596 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 37229667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 38121392 - 38121321
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  38121392 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 38121321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 44436366 - 44436295
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| |||||  |||||| ||||| || |||||||||||||||||| |  |||||||||| ||||    
T  44436366 ttgaaaacataaactaactctctttcttaaaagataaatttgtaaaaacaatagtgtttacaaacaacttta 44436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 45474471 - 45474542
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  45474471 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 45474542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 14493772 - 14493734
Alignment:
Q  298 aaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  14493772 aaatacattaattaattctttaccaacatacccctattt 14493734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 3060484 - 3060431
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  3060484 cctctttcttaaaagataaaattgtaaaaacaatagtaattacaaacatattta 3060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 6027615 - 6027652
Alignment:
Q  218 ttatactacctccgtccttaattataggatccttttga 255  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  6027615 ttatactacctccgtccctaattataagatccttttga 6027652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 19353373 - 19353418
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  19353373 ttaaaggataaaattgtaaaaacaataataattacaaacatattta 19353418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 22302642 - 22302597
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||| |||||||||||||||||||||||    
T  22302642 ttaaaggataaaattgtaaaaataataataattacaaacaaattta 22302597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 26322156 - 26322103
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  26322156 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 26322103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 1748380 - 1748416
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  1748380 atactacctccgtccctaattatagggtccttttgaa 1748416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 1859738 - 1859774
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||| |||||||||||| |||||    
T  1859738 aaatttgtaaaaacaatagtaattacaaacatattta 1859774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 9701069 - 9701105
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||||||||| || |||||||||    
T  9701069 atactacctccgtccttaattataagacccttttgaa 9701105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 12296394 - 12296350
Alignment:
Q  292 atttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||| || |||||||| ||||||||||| |||||||||||||||    
T  12296394 atttccaagtacattaattaattctttaccaacatacccctattt 12296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 12969567 - 12969627
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||||||||   ||||  ||||| ||||| ||||||||||| |||||||||||||||    
T  12969567 ataagacccctttgttattttcaaatatattaattaattctttaccaacatacccctattt 12969627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 16807117 - 16807069
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||| || ||| |||||||||||||| |||||| ||||||||||||||    
T  16807117 ttaaaggataaaattgtaaaaacaatagtaattataaacaaatttatta 16807069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 16846398 - 16846350
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||| || ||| |||||||||||||| |||||| ||||||||||||||    
T  16846398 ttaaaggataaaattgtaaaaacaatagtaattataaacaaatttatta 16846350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 30466316 - 30466352
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||||||| |||||||||||| |||||    
T  30466316 aaatttgtaaaaacaatagtaattacaaacatattta 30466352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 32121103 - 32121171
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  32121103 aaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 32121171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 36556239 - 36556207
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||||| ||||||||||||||||||    
T  36556239 ttgtaaaaacaatagtaattacaaacaaattta 36556207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 28017086 - 28017186
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||| || |||||||||||||| ||| ||||||| ||||  || ||| || |||||||||||  |||||||||||||||||||| || ||| ||||    
T  28017086 attaaatattatattgaaaacatacattaaccctctttcttaacggataaaattataaaaacaatagcaattacaaacaaatttattaccactttcaatt 28017185  T
Q  439 t 439  Q
    |    
T  28017186 t 28017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 19292894 - 19292954
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||||  |||||||| |||||||| || |||||||||||||||||| |||||    
T  19292894 ataagacccctttagtatttctaagtacattaattatttctttactaacatacccttattt 19292954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 439
Target Start/End: Complemental strand, 31137298 - 31137198
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    ||||| |||||  |||||||||||||| || ||||| | ||||| || ||| ||||||||  ||||| |||||||||||||||||||| |  ||||||||    
T  31137298 attaagtactatgttgaaaacatacaccaaccctctctcttaaaggataaaattgtaaaagaaataacaattacaaacaaatttattaccccttttaatt 31137199  T
Q  439 t 439  Q
    |    
T  31137198 t 31137198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 40121150 - 40121062
Alignment:
Q  338 tattaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||||||||||  ||||||||||| ||||   |||| | ||||| || ||| ||||||| |||||| |||||||||||||||||||||    
T  40121150 tattaaatactatgttgaaaacataaactatttctctctcttaaaggataaaattgtaaatacaatagtaattacaaacaaatttatta 40121062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 9140414 - 9140343
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  9140414 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaataataattacaaacatattta 9140343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 26842927 - 26842998
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  26842927 ttgaaaacataaaccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 26842998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 29643026 - 29642954
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  29643026 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 29642954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 1275614 - 1275543
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  1275614 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 1275543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 6387481 - 6387552
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  6387481 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 6387552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 7607515 - 7607444
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || ||  |||| | |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  7607515 ttgaaaacataaaccaacactctctcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 7607444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 8291059 - 8291130
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8291059 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8291130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 8612456 - 8612385
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8612456 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8612385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 12930616 - 12930581
Alignment:
Q  221 tactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| |||||||||||||||||||||    
T  12930616 tactacctccgtccctaattataggatccttttgaa 12930581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 21119714 - 21119785
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| |||||   ||| | |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  21119714 ttgaaaacataaactaattatctctcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 21119785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 23320811 - 23320882
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  23320811 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 23320882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 25247572 - 25247501
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  25247572 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 25247501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 27529524 - 27529489
Alignment:
Q  221 tactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| |||||||||||||||||||||    
T  27529524 tactacctccgtccctaattataggatccttttgaa 27529489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28016427 - 28016356
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  28016427 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 28016356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 31200245 - 31200174
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  31200245 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 31200174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 31458153 - 31458224
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  31458153 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 31458224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 32872256 - 32872185
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  32872256 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 32872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 34978958 - 34978887
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34978958 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34978887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 36698012 - 36697941
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  36698012 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 36697941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 39871494 - 39871423
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  39871494 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 39871423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 40300386 - 40300457
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  40300386 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 40300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 43440991 - 43440920
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  43440991 ttgaaaacataagccaaccctcttttttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 43440920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 47323410 - 47323339
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| |  || ||||| | ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  47323410 ttgaaaacataaatcaaccctctctcttaaaggataaaattgtaaaaacaataataattacaaacatattta 47323339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 16957816 - 16957861
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  16957816 ttaaacgataaaattgtaaaaacaataataattacaaacatattta 16957861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 20950894 - 20950849
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  20950894 ttaaaggataaaattgtaaaaacaataataattacaaacatattta 20950849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 21119858 - 21119821
Alignment:
Q  219 tatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  21119858 tatactacctccgtccctaattacaggatccttttgaa 21119821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 28900768 - 28900821
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgt 145  Q
    |||||||||||| ||| ||||| || |||| ||||||||||||||| |||||||    
T  28900768 aacaacttatttgcagcttataacacaagcatttattatgataagcgcttatgt 28900821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 47795848 - 47795905
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtataa 149  Q
    |||| ||||||| ||| |||||||||||||  |||| ||||||| |||||||||||||    
T  47795848 aacagcttatttgcagcttatagcataagcgcttatcatgataaccacttatgtataa 47795905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 2887805 - 2887765
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatcatt 431  Q
    ||||||||||||||  ||||||||| |||||||||||||||    
T  2887805 ttgtaaaaacaatagcaattacaaataaatttattatcatt 2887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 10539010 - 10538941
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| |||||  |||| ||||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  10539010 ttgaaaacataaactaa--ctctctattaaaggataaaattgtaaaaacaatagtcattacaaacaacttta 10538941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 19845650 - 19845590
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    |||||||||||||   ||||| || |||||||| || |||||||||||||||||| |||||    
T  19845650 ataagacccctttggtatttccaagtacattaattatttctttactaacatacccttattt 19845590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22991782 - 22991746
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  22991782 atactacctccgtccctaattataagatccttttgaa 22991746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 32699685 - 32699625
Alignment:
Q  276 ataagacccctttaacatttctaaatacattaaataattctttactaacatacccctattt 336  Q
    ||||||||||||| | ||||| || |||||||| || |||||||| ||||||||| |||||    
T  32699685 ataagacccctttgatatttccaagtacattaattatttctttaccaacatacccttattt 32699625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 33672975 - 33673027
Alignment:
Q  98 ttatttacagtttatagcataagcctttattatgataagcacttatgtataag 150  Q
    |||||| ||| |||||||| |||  ||||||||||||||| ||||||||||||    
T  33672975 ttatttgcagcttatagcacaagtatttattatgataagcgcttatgtataag 33673027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 36646515 - 36646447
Alignment:
Q  355 aaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  36646515 aaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 36646447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 38500107 - 38500051
Alignment:
Q  92 aacaacttatttacagtttatagcataagcctttattatgataagcacttatgtata 148  Q
    |||| ||||||| |||||||||||| ||||  |||| ||||||||| ||||||||||    
T  38500107 aacagcttatttgcagtttatagcacaagcgcttatcatgataagcgcttatgtata 38500051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 43093254 - 43093218
Alignment:
Q  387 aaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  43093254 aaatttgtaaaaacaattataattacaaacatattta 43093218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 43456296 - 43456393
Alignment:
Q  340 ttaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    ||||||| || |||||||||||||| |||  |||| | |||||| | ||| |||||||| |||||| |||||| |||||||||||||||| |||||||||    
T  43456296 ttaaatattatattgaaaacatacattaa--ctctctcttaaattataaaattgtaaaagcaataacaattacgaacaaatttattatcacttttaattt 43456393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 5733805 - 5733870
Alignment:
Q  360 atacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||||||| ||||  | |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  5733805 atacactaaccctcgcttttaaatgataaatt-gtaaaaacaataataattacaaacaaatttatta 5733870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 10497509 - 10497609
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaatt 438  Q
    |||||||||||  || |||||||||||||  | ||| | ||||| || ||| ||||||||| |||| |||||| ||||||||||||||||| ||| ||||    
T  10497509 attaaatactatgttaaaaacatacactagtcttctctcttaaaggataaaattgtaaaaataatagtaattataaacaaatttattatcactttcaatt 10497608  T
Q  439 t 439  Q
    |    
T  10497609 t 10497609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28298251 - 28298180
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  28298251 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaataataattacaaacatattta 28298180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 31937232 - 31937303
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  ||||  |||||| |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  31937232 ttgaaaacataatctaacactctttcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 31937303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 45742687 - 45742616
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| ||||||||||||| ||||    
T  45742687 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtaattacaaacaacttta 45742616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 54676704 - 54676775
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| ||||||||||||| ||||    
T  54676704 ttgaaaacataaactaaccttcttttttaaaggataaaattgtaaaaacaatagtaattacaaacaacttta 54676775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 426
Target Start/End: Original strand, 50352220 - 50352294
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttatta 426  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| |||||||    
T  50352220 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaactttatta 50352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 25124108 - 25124055
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||| |||||    
T  25124108 cctctttattaaaggataaaattgtaaaaacaatagtaattacaaacatattta 25124055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 29460586 - 29460521
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaaca 417  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||||||||||||||||    
T  29460586 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaataataattacaaaca 29460521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 407
Target Start/End: Original strand, 30191788 - 30191896
Alignment:
Q  292 atttctaaatacattaaataattctttactaacatacccctatttttattaaatactacattgaaaacatacactaagcctctttattaaatgacaaatt 391  Q
    ||||| || |||||||| ||||||||||  |||||||||||       ||||||||||  |||||||||||| |||| ||||| | |||||||| ||| |    
T  30191788 atttcgaagtacattaattaattctttatcaacatacccct-------ttaaatactatcttgaaaacatacgctaaccctctctcttaaatgataaaat 30191880  T
Q  392 tgtaaaaacaataata 407  Q
    ||||| ||||||||||    
T  30191881 tgtaacaacaataata 30191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 20391320 - 20391248
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  20391320 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 20391248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 3085441 - 3085480
Alignment:
Q  217 tttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  3085441 tttatactacctccgtccctaattataagatccttttgaa 3085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 8344061 - 8344132
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  8344061 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 8344132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 9328121 - 9328050
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  9328121 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 9328050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 10588230 - 10588301
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  10588230 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 10588301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 15241635 - 15241706
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  15241635 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 15241706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 19281972 - 19281901
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  19281972 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 19281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 20761706 - 20761635
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  20761706 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 20761635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 20768097 - 20768026
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  20768097 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 20768026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 29427645 - 29427716
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  29427645 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 29427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 30771678 - 30771749
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  30771678 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 30771749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 32032872 - 32032801
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  32032872 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 32032801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 32899120 - 32899049
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  32899120 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 32899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 33413674 - 33413745
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  33413674 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaacaacttta 33413745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 33501810 - 33501739
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  33501810 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 33501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 34273100 - 34273029
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  34273100 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 34273029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 35675801 - 35675730
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  35675801 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 35675730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 36392010 - 36392081
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  36392010 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaacaacttta 36392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 37639769 - 37639698
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  37639769 ttgaaaacataagccaaccctcttttttaaaagataaaattgtaaaaacaatagtaattacaaacatattta 37639698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 415
Target Start/End: Original strand, 38027288 - 38027351
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaa 415  Q
    ||||||||||| || || ||||||| ||||| || ||| |||||||||||||| ||||||||||    
T  38027288 ttgaaaacataaaccaatcctctttcttaaaggataaaattgtaaaaacaatagtaattacaaa 38027351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 38405706 - 38405643
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaa 415  Q
    ||||||||||| || || ||||| | ||||| || ||| |||||||||||||||||||||||||    
T  38405706 ttgaaaacataaaccaaccctctctcttaaaggataaaattgtaaaaacaataataattacaaa 38405643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 39670881 - 39670952
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  39670881 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 39670952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 41191417 - 41191346
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  41191417 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 41191346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 43387874 - 43387803
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  43387874 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 43387803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 44294945 - 44295016
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  44294945 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 44295016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 47228609 - 47228538
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  47228609 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 47228538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 47311446 - 47311517
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || |||||||  |||| || ||| ||||||||||||||||||||||||||| |||||    
T  47311446 ttgaaaacataagccaaccctctttcctaaaggataaaattgtaaaaacaataataattacaaacatattta 47311517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 47683386 - 47683351
Alignment:
Q  221 tactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||||| |||||||||||||||||||||    
T  47683386 tactacctccgtccctaattataggatccttttgaa 47683351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 51536323 - 51536394
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  51536323 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 51536394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 53277067 - 53276996
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  53277067 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 53276996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 55014847 - 55014776
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || | ||| | ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  55014847 ttgaaaacataaaccaaccatctctcttaaaagataaaattgtaaaaacaataataattacaaacatattta 55014776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 55563007 - 55562936
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  55563007 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 55562936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 375581 - 375651
Alignment:
Q  353 tgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  375581 tgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 375651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 5733940 - 5733902
Alignment:
Q  218 ttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  5733940 ttatactacctctgtccttaattataggacccttttgaa 5733902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 18018832 - 18018885
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  18018832 cctctttcttaaaagataaaattgtaaaaacaatagtaattacaaacatattta 18018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 55777075 - 55777120
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  55777075 ttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 55777120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 55841255 - 55841300
Alignment:
Q  378 ttaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  55841255 ttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 55841300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 625707 - 625743
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  625707 atactacctccgtccctaattataggatctttttgaa 625743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 5734379 - 5734411
Alignment:
Q  213 ataatttatactacctccgtccttaattatagg 245  Q
    |||||||||||||||||||||| ||||||||||    
T  5734379 ataatttatactacctccgtccctaattatagg 5734411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 22130401 - 22130322
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaa 419  Q
    |||||||||||  ||||||||||||| ||| ||||| | || || || ||| |||||||| |||| |||||||||||||||    
T  22130401 attaaatactatgttgaaaacatacaataatcctctctcttcaaagataaaattgtaaaa-caattataattacaaacaaa 22130322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 26889937 - 26889901
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  26889937 atactacctccgtccctaattataagatccttttgaa 26889901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 37776787 - 37776739
Alignment:
Q  208 ttataataatttatactacctccgtccttaattataggatccttttgaa 256  Q
    |||||| || || ||||||||||||||||||||||| || |||||||||    
T  37776787 ttataacaaattctactacctccgtccttaattataagacccttttgaa 37776739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 39691252 - 39691196
Alignment:
Q  157 gcaaaagataaattaatgttgaaattttgtcgcatatgctataagttgcttttataa 213  Q
    |||||||||||| ||||||| ||||| | | | ||||||||||||||| ||||||||    
T  39691252 gcaaaagataaaataatgttaaaattgttttgtatatgctataagttgtttttataa 39691196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 437
Target Start/End: Original strand, 47298 - 47396
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttattatcatttttaat 437  Q
    ||||||||||| ||||||||||||||||||  | || | |||||  | |||   ||||||||||||   ||||||||||||||||||||||||||||||    
T  47298 attaaatactatattgaaaacatacactaactcactctcttaaagaataaaagggtaaaaacaatagcgattacaaacaaatttattatcatttttaat 47396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 56067 - 56152
Alignment:
Q  339 attaaatactacattgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaatttat 424  Q
    ||||||||||| |||||||||||||||||| || || | |||||  | |||  |||||||||||||   |||||||||||||||||    
T  56067 attaaatactatattgaaaacatacactaacccactctcttaaagaataaaagtgtaaaaacaatagcgattacaaacaaatttat 56152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 48952 - 48916
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48952 atactacctccgtccctaattataggatccttttgaa 48916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 4179 - 4108
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  4179 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 4108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 7021 - 6950
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  7021 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 13445 - 13374
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || | ||| | |||||||| ||| |||||||||||||| |||||||||||| |||||    
T  13445 ttgaaaacataaaccaaccttctctcttaaatgataaaattgtaaaaacaatagtaattacaaacatattta 13374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 9635 - 9564
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  9635 ttgaaaacataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 18510 - 18581
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| || || || || | ||||| || ||| ||||||||||||||||||||||||||| |||||    
T  18510 ttgaaaacataaacaaaccccctctcttaaaggataaaattgtaaaaacaataataattacaaacatattta 18581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 31568 - 31497
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  31568 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaacaacttta 31497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 19840 - 19769
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||  | || ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  19840 ttgaaaacataagccaaccctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 423
Target Start/End: Original strand, 8372 - 8444
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||||||| ||||| | ||||| ||||| || ||| ||||||| |||||| | ||||||||||| ||||    
T  8372 attgaaaacataaactaaccttctttcttaaaggataaaattgtaaanacaatagtgattacaaacaacttta 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 5167 - 5102
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaaca 417  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||    
T  5167 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaaca 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 14230 - 14165
Alignment:
Q  352 ttgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaaca 417  Q
    ||||||||||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||    
T  14230 ttgaaaacataaactaaccttctttcttaaaagataaaattgtaaaaacaatagtgattacaaaca 14165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 9289 - 9236
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  9289 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 9236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 3611 - 3664
Alignment:
Q  370 cctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    ||||||| ||||| || ||| |||||||||||||| |||||||||||| |||||    
T  3611 cctctttcttaaaggataaaattgtaaaaacaatagtaattacaaacatattta 3664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 1977 - 1929
Alignment:
Q  391 ttgtaaaaacaataataattacaaacaaatttattatcatttttaattt 439  Q
    |||||||||||||| |||||||||| |||||||||| || ||| |||||    
T  1977 ttgtaaaaacaatagtaattacaaataaatttattaccactttcaattt 1929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 4403 - 4439
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||||||||||||||  |||||||||    
T  4403 atactacctccgtccttaattatagggcccttttgaa 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 6350 - 6386
Alignment:
Q  220 atactacctccgtccttaattataggatccttttgaa 256  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  6350 atactacctccgtccctaattataggacccttttgaa 6386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 145 - 105
Alignment:
Q  214 taatttatactacctccgtccttaattataggatccttttg 254  Q
    |||| |||||||||||||||||||| ||||||| |||||||    
T  145 taatatatactacctccgtccttaaatataggagccttttg 105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 61735 - 61663
Alignment:
Q  351 attgaaaacatacactaagcctctttattaaatgacaaatttgtaaaaacaataataattacaaacaaattta 423  Q
    |||||||| ||| ||||| | ||||| ||||| || ||| |||||||||||||| | ||||||||||| ||||    
T  61735 attgaaaatataaactaaccttctttcttaaaggataaaattgtaaaaacaatagtgattacaaacaacttta 61663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University