View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9296_low_16 (Length: 264)
Name: NF9296_low_16
Description: NF9296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9296_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 12684116 - 12683875
Alignment:
| Q |
18 |
agtaacatatgtaaaatggaagaaggaagtgaaatcttgatattagacactaaaaaacagaaagtacaaaaattaaatagtgcaagaaaacggcatgaca |
117 |
Q |
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| T |
12684116 |
agtaacatatgtaaaatggaagaaggaagtgaaatcttgatattagacactaaaaaacagaaagtacaaaaattaaatagtgcaagaaaacggcatgaca |
12684017 |
T |
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| Q |
118 |
ttgaaacagtactaggctagatacttcacccactaggctaagctagatacttcccccacaagaatgttgatgttgatacgactttgatctattatatgta |
217 |
Q |
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| T |
12684016 |
ttgaaacagtactaggctagatgcttcacccaccaggctaagctagatacttcccccacaagaatgttgatgttgatacgactttgatctattatatgta |
12683917 |
T |
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| Q |
218 |
gtttagaaaattagatgatactaaaaaattagaattatctac |
259 |
Q |
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| T |
12683916 |
gtttagaaaattagatgatactaaaaaattagaattatctac |
12683875 |
T |
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