View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9297_low_26 (Length: 201)

Name: NF9297_low_26
Description: NF9297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9297_low_26
NF9297_low_26
[»] chr3 (45 HSPs)
chr3 (1-122)||(22273213-22273334)
chr3 (1-122)||(2451142-2451263)
chr3 (3-122)||(18908858-18908977)
chr3 (3-122)||(49230475-49230594)
chr3 (4-122)||(11813145-11813263)
chr3 (3-122)||(7851927-7852046)
chr3 (23-119)||(11813017-11813113)
chr3 (3-86)||(16819162-16819245)
chr3 (3-88)||(11812920-11813005)
chr3 (3-88)||(38166333-38166418)
chr3 (3-88)||(19944924-19945009)
chr3 (61-122)||(49230425-49230486)
chr3 (4-88)||(30141103-30141187)
chr3 (18-88)||(12796843-12796913)
chr3 (13-119)||(16819257-16819363)
chr3 (23-119)||(7852058-7852154)
chr3 (14-88)||(51160142-51160216)
chr3 (8-88)||(13815996-13816076)
chr3 (6-62)||(17936601-17936657)
chr3 (79-122)||(10737001-10737044)
chr3 (79-122)||(19262687-19262730)
chr3 (79-122)||(33340285-33340328)
chr3 (79-122)||(45581278-45581321)
chr3 (79-120)||(2048505-2048546)
chr3 (7-88)||(7851803-7851884)
chr3 (23-88)||(30204815-30204880)
chr3 (79-122)||(19230495-19230538)
chr3 (14-88)||(17099033-17099107)
chr3 (23-88)||(11062776-11062841)
chr3 (79-120)||(23490950-23490991)
chr3 (5-72)||(7851873-7851940)
chr3 (79-122)||(11813275-11813318)
chr3 (91-122)||(38166484-38166515)
chr3 (23-58)||(47786551-47786586)
chr3 (3-33)||(18908999-18909029)
chr3 (3-33)||(19945055-19945085)
chr3 (3-33)||(22273354-22273384)
chr3 (14-72)||(50113797-50113855)
chr3 (23-88)||(319298-319363)
chr3 (3-88)||(8630162-8630247)
chr3 (79-120)||(25057217-25057258)
chr3 (79-120)||(30141203-30141244)
chr3 (80-119)||(8630259-8630299)
chr3 (10-62)||(18738119-18738171)
chr3 (79-119)||(54049611-54049651)
[»] chr6 (44 HSPs)
chr6 (3-122)||(25173697-25173816)
chr6 (3-122)||(4989167-4989286)
chr6 (3-122)||(16827652-16827771)
chr6 (3-88)||(18843697-18843782)
chr6 (3-88)||(23975828-23975913)
chr6 (3-88)||(33316402-33316487)
chr6 (4-88)||(18004847-18004931)
chr6 (61-122)||(16827760-16827821)
chr6 (3-88)||(18578953-18579038)
chr6 (3-88)||(18825636-18825721)
chr6 (23-119)||(23975925-23976021)
chr6 (5-88)||(35017442-35017525)
chr6 (4-119)||(33316274-33316390)
chr6 (23-88)||(14628377-14628442)
chr6 (7-88)||(19627617-19627698)
chr6 (7-88)||(35011116-35011197)
chr6 (29-121)||(18004769-18004860)
chr6 (79-122)||(18128602-18128645)
chr6 (79-122)||(19984876-19984919)
chr6 (23-88)||(13622940-13623005)
chr6 (5-62)||(18128484-18128541)
chr6 (23-88)||(18775625-18775690)
chr6 (23-88)||(32896393-32896458)
chr6 (23-62)||(16238723-16238762)
chr6 (14-61)||(18422182-18422229)
chr6 (14-88)||(31626859-31626933)
chr6 (79-120)||(13622869-13622910)
chr6 (79-120)||(18004721-18004762)
chr6 (79-120)||(18128652-18128693)
chr6 (79-119)||(18128555-18128595)
chr6 (79-119)||(18128725-18128765)
chr6 (79-119)||(18579050-18579090)
chr6 (79-119)||(19627714-19627754)
chr6 (79-119)||(35011060-35011100)
chr6 (23-90)||(14628323-14628390)
chr6 (28-86)||(13016526-13016584)
chr6 (79-121)||(18825608-18825650)
chr6 (3-33)||(25173812-25173842)
chr6 (3-33)||(25173870-25173900)
chr6 (14-88)||(25646592-25646666)
chr6 (79-120)||(18128676-18128717)
chr6 (84-120)||(16238792-16238828)
chr6 (81-121)||(18843671-18843711)
chr6 (80-120)||(35017389-35017429)
[»] chr5 (45 HSPs)
chr5 (1-122)||(25424843-25424964)
chr5 (3-122)||(29192556-29192675)
chr5 (3-119)||(10523-10639)
chr5 (3-122)||(22368326-22368445)
chr5 (3-122)||(110877-110994)
chr5 (3-122)||(16534570-16534689)
chr5 (3-122)||(11340828-11340949)
chr5 (24-122)||(25944472-25944570)
chr5 (3-88)||(10426-10511)
chr5 (3-88)||(1221627-1221712)
chr5 (61-122)||(11340778-11340839)
chr5 (14-119)||(11582235-11582340)
chr5 (3-88)||(19498055-19498140)
chr5 (3-88)||(43445697-43445782)
chr5 (4-88)||(10780102-10780186)
chr5 (3-83)||(22885030-22885110)
chr5 (67-122)||(18780001-18780056)
chr5 (23-119)||(1221519-1221615)
chr5 (8-88)||(9732586-9732666)
chr5 (4-121)||(9732478-9732595)
chr5 (4-88)||(11580039-11580123)
chr5 (23-119)||(43445589-43445685)
chr5 (4-119)||(11340987-11341102)
chr5 (5-88)||(28257896-28257979)
chr5 (67-122)||(35793061-35793116)
chr5 (23-121)||(10780018-10780115)
chr5 (69-122)||(22368442-22368495)
chr5 (7-88)||(34937690-34937771)
chr5 (3-88)||(17473688-17473775)
chr5 (23-119)||(19498152-19498247)
chr5 (61-122)||(35793105-35793166)
chr5 (79-120)||(10779969-10780010)
chr5 (79-120)||(21653185-21653226)
chr5 (23-88)||(21661408-21661473)
chr5 (79-120)||(25944422-25944463)
chr5 (80-122)||(1171286-1171328)
chr5 (23-88)||(25211799-25211864)
chr5 (23-88)||(25275951-25276016)
chr5 (79-119)||(22368274-22368314)
chr5 (79-119)||(34937787-34937827)
chr5 (3-33)||(10661-10691)
chr5 (3-33)||(18779939-18779969)
chr5 (3-33)||(35792999-35793029)
chr5 (79-120)||(21653137-21653178)
chr5 (5-62)||(23986155-23986212)
[»] chr2 (33 HSPs)
chr2 (1-122)||(19888620-19888741)
chr2 (3-122)||(8941891-8942010)
chr2 (3-122)||(25211072-25211191)
chr2 (1-122)||(3800956-3801077)
chr2 (4-122)||(34822544-34822662)
chr2 (3-88)||(21276331-21276416)
chr2 (61-122)||(3801066-3801127)
chr2 (3-88)||(12643801-12643886)
chr2 (61-122)||(34822494-34822555)
chr2 (61-122)||(38706753-38706814)
chr2 (23-119)||(12643693-12643789)
chr2 (5-88)||(25600327-25600410)
chr2 (13-119)||(3800814-3800920)
chr2 (3-88)||(12637983-12638068)
chr2 (23-119)||(12637875-12637971)
chr2 (79-122)||(20629103-20629146)
chr2 (79-122)||(461107-461150)
chr2 (83-122)||(22273335-22273374)
chr2 (83-122)||(22282568-22282607)
chr2 (7-88)||(42180202-42180283)
chr2 (79-122)||(9654576-9654619)
chr2 (14-88)||(25877692-25877766)
chr2 (14-88)||(36892434-36892508)
chr2 (23-88)||(24966541-24966606)
chr2 (79-120)||(24966660-24966701)
chr2 (79-119)||(7513799-7513839)
chr2 (84-120)||(24966636-24966672)
chr2 (79-119)||(42180146-42180186)
chr2 (86-122)||(43644681-43644717)
chr2 (61-115)||(461064-461118)
chr2 (3-61)||(15631765-15631823)
chr2 (3-33)||(25211213-25211243)
chr2 (23-88)||(6877859-6877924)
[»] chr1 (30 HSPs)
chr1 (1-122)||(17146999-17147120)
chr1 (3-122)||(15863210-15863329)
chr1 (5-120)||(41217761-41217876)
chr1 (3-87)||(22250765-22250849)
chr1 (23-122)||(22352464-22352563)
chr1 (5-88)||(41217665-41217748)
chr1 (4-88)||(20895504-20895588)
chr1 (79-122)||(20444182-20444225)
chr1 (79-122)||(37846151-37846194)
chr1 (7-88)||(20252461-20252542)
chr1 (79-122)||(20895475-20895518)
chr1 (84-122)||(20529922-20529960)
chr1 (83-121)||(44036576-44036614)
chr1 (23-88)||(2422816-2422881)
chr1 (79-120)||(20529948-20529989)
chr1 (79-120)||(22352571-22352612)
chr1 (79-120)||(41217889-41217930)
chr1 (80-119)||(20589808-20589847)
chr1 (80-122)||(20589758-20589800)
chr1 (5-62)||(9786114-9786171)
chr1 (83-120)||(20929924-20929961)
chr1 (79-120)||(22365125-22365166)
chr1 (79-119)||(20252558-20252598)
chr1 (80-119)||(20589858-20589897)
chr1 (80-122)||(9786009-9786051)
chr1 (14-88)||(22407968-22408042)
chr1 (26-88)||(35053250-35053312)
chr1 (23-88)||(5676351-5676416)
chr1 (79-120)||(20252581-20252622)
chr1 (94-122)||(21857930-21857958)
[»] chr4 (43 HSPs)
chr4 (3-122)||(18246357-18246476)
chr4 (3-122)||(16520981-16521100)
chr4 (5-122)||(19998746-19998863)
chr4 (23-121)||(15211729-15211827)
chr4 (3-88)||(22356413-22356498)
chr4 (3-88)||(7134299-7134384)
chr4 (3-88)||(8372726-8372811)
chr4 (3-88)||(18166993-18167078)
chr4 (61-122)||(19998696-19998757)
chr4 (3-62)||(26678322-26678381)
chr4 (4-121)||(18167064-18167181)
chr4 (35-122)||(34393576-34393663)
chr4 (39-119)||(7134159-7134239)
chr4 (23-119)||(8372823-8372919)
chr4 (4-88)||(53909545-53909629)
chr4 (4-119)||(26678393-26678508)
chr4 (3-70)||(47355643-47355710)
chr4 (4-88)||(15274460-15274544)
chr4 (23-119)||(19998877-19998972)
chr4 (5-88)||(34393506-34393589)
chr4 (79-122)||(109925-109968)
chr4 (84-122)||(15211694-15211732)
chr4 (79-121)||(15274431-15274473)
chr4 (80-122)||(55378472-55378514)
chr4 (79-120)||(9293894-9293935)
chr4 (7-88)||(19699406-19699487)
chr4 (7-88)||(19709991-19710072)
chr4 (14-62)||(33738609-33738657)
chr4 (79-122)||(53909516-53909559)
chr4 (14-88)||(12837998-12838072)
chr4 (82-120)||(22356340-22356378)
chr4 (23-88)||(44054279-44054344)
chr4 (79-119)||(7134247-7134287)
chr4 (79-119)||(19699350-19699390)
chr4 (79-119)||(19709935-19709975)
chr4 (3-33)||(18246498-18246528)
chr4 (14-88)||(44345185-44345259)
chr4 (79-120)||(10642556-10642597)
chr4 (23-88)||(12901456-12901521)
chr4 (26-58)||(45460709-45460741)
chr4 (24-96)||(47355697-47355769)
chr4 (86-118)||(53706604-53706636)
chr4 (82-122)||(54119978-54120018)
[»] chr8 (38 HSPs)
chr8 (4-122)||(28836159-28836277)
chr8 (21-122)||(3433388-3433489)
chr8 (3-88)||(24108454-24108539)
chr8 (61-122)||(3433478-3433539)
chr8 (3-88)||(13664539-13664624)
chr8 (3-88)||(13723814-13723899)
chr8 (4-88)||(22909332-22909416)
chr8 (48-121)||(22008285-22008358)
chr8 (5-74)||(22323216-22323285)
chr8 (10-87)||(23509188-23509265)
chr8 (4-112)||(3433268-3433376)
chr8 (23-119)||(13664431-13664527)
chr8 (23-119)||(13723706-13723802)
chr8 (25-119)||(23509284-23509378)
chr8 (4-88)||(22008345-22008429)
chr8 (4-88)||(41508917-41509001)
chr8 (79-122)||(29758736-29758779)
chr8 (79-122)||(43375271-43375314)
chr8 (84-122)||(24387378-24387416)
chr8 (80-122)||(41508889-41508931)
chr8 (7-88)||(18610547-18610628)
chr8 (79-120)||(22008225-22008266)
chr8 (83-122)||(24930792-24930831)
chr8 (22-88)||(37605402-37605468)
chr8 (79-120)||(13664382-13664423)
chr8 (79-120)||(13723657-13723698)
chr8 (23-88)||(20655757-20655822)
chr8 (79-120)||(22909279-22909320)
chr8 (79-120)||(24719162-24719203)
chr8 (7-88)||(24719316-24719397)
chr8 (79-119)||(18610644-18610684)
chr8 (85-121)||(22909309-22909345)
chr8 (7-62)||(16041370-16041425)
chr8 (7-62)||(16043046-16043101)
chr8 (79-121)||(24108426-24108468)
chr8 (79-119)||(16041314-16041354)
chr8 (79-119)||(16042990-16043030)
chr8 (79-119)||(24719210-24719250)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-122)||(31299-31418)
[»] scaffold0003 (3 HSPs)
scaffold0003 (5-120)||(5403-5517)
scaffold0003 (83-122)||(217420-217459)
scaffold0003 (3-33)||(5540-5570)
[»] chr7 (38 HSPs)
chr7 (5-120)||(16416691-16416805)
chr7 (3-88)||(2192595-2192680)
chr7 (3-88)||(7286317-7286402)
chr7 (3-86)||(15952848-15952931)
chr7 (3-88)||(16480825-16480910)
chr7 (3-62)||(14253060-14253119)
chr7 (4-88)||(7291027-7291111)
chr7 (3-62)||(2024810-2024869)
chr7 (5-90)||(12545544-12545629)
chr7 (7-91)||(12545600-12545684)
chr7 (25-119)||(2192489-2192583)
chr7 (4-87)||(369263-369346)
chr7 (79-122)||(32496231-32496274)
chr7 (7-88)||(13867879-13867960)
chr7 (79-122)||(11582620-11582663)
chr7 (83-122)||(16210151-16210190)
chr7 (79-121)||(369333-369375)
chr7 (80-122)||(7286166-7286208)
chr7 (14-88)||(44863563-44863637)
chr7 (14-88)||(47288096-47288170)
chr7 (79-120)||(13038894-13038935)
chr7 (23-112)||(16480717-16480806)
chr7 (79-122)||(122947-122990)
chr7 (80-119)||(11285564-11285603)
chr7 (79-122)||(36051035-36051078)
chr7 (79-121)||(7291098-7291140)
chr7 (14-88)||(26071937-26072011)
chr7 (14-88)||(26095724-26095798)
chr7 (80-120)||(12545491-12545531)
chr7 (14-61)||(142015-142062)
chr7 (3-33)||(16416828-16416858)
chr7 (77-120)||(18305574-18305619)
chr7 (79-120)||(3055163-3055204)
chr7 (23-88)||(3893507-3893572)
chr7 (7-88)||(18305634-18305715)
chr7 (23-88)||(45453934-45453999)
chr7 (80-120)||(7286266-7286306)
chr7 (80-120)||(13867774-13867814)
[»] scaffold0028 (3 HSPs)
scaffold0028 (3-122)||(128696-128815)
scaffold0028 (14-119)||(90674-90779)
scaffold0028 (3-86)||(90791-90874)
[»] scaffold0383 (7 HSPs)
scaffold0383 (3-122)||(607-726)
scaffold0383 (4-120)||(5569-5685)
scaffold0383 (77-122)||(507-552)
scaffold0383 (61-121)||(558-618)
scaffold0383 (79-122)||(5671-5714)
scaffold0383 (5-62)||(5499-5556)
scaffold0383 (3-33)||(748-778)
[»] scaffold0032 (1 HSPs)
scaffold0032 (3-122)||(109886-110005)
[»] scaffold0039 (3 HSPs)
scaffold0039 (4-120)||(21020-21136)
scaffold0039 (79-122)||(20991-21034)
scaffold0039 (5-59)||(21149-21203)
[»] scaffold0447 (5 HSPs)
scaffold0447 (5-120)||(2705-2820)
scaffold0447 (5-120)||(2833-2948)
scaffold0447 (4-120)||(2961-3077)
scaffold0447 (79-122)||(3063-3106)
scaffold0447 (5-62)||(2635-2692)
[»] scaffold0009 (2 HSPs)
scaffold0009 (23-122)||(270511-270609)
scaffold0009 (23-88)||(236531-236596)
[»] scaffold0023 (3 HSPs)
scaffold0023 (3-88)||(156172-156257)
scaffold0023 (4-119)||(156045-156160)
scaffold0023 (79-122)||(85927-85970)
[»] scaffold0622 (3 HSPs)
scaffold0622 (4-120)||(7653-7769)
scaffold0622 (5-88)||(7557-7640)
scaffold0622 (4-122)||(7755-7872)
[»] scaffold0483 (3 HSPs)
scaffold0483 (3-88)||(4627-4712)
scaffold0483 (79-118)||(4424-4463)
scaffold0483 (79-119)||(4575-4615)
[»] scaffold0335 (1 HSPs)
scaffold0335 (3-88)||(9919-10004)
[»] scaffold0109 (3 HSPs)
scaffold0109 (3-88)||(49467-49552)
scaffold0109 (79-118)||(49264-49303)
scaffold0109 (79-119)||(49415-49455)
[»] scaffold0315 (1 HSPs)
scaffold0315 (3-87)||(16888-16972)
[»] scaffold0269 (6 HSPs)
scaffold0269 (3-91)||(400-488)
scaffold0269 (7-88)||(3175-3256)
scaffold0269 (79-119)||(3322-3362)
scaffold0269 (3-33)||(484-514)
scaffold0269 (79-120)||(3345-3386)
scaffold0269 (79-112)||(3400-3433)
[»] scaffold0195 (4 HSPs)
scaffold0195 (3-88)||(17642-17727)
scaffold0195 (3-88)||(19672-19757)
scaffold0195 (23-119)||(19769-19865)
scaffold0195 (79-119)||(17739-17779)
[»] scaffold0597 (1 HSPs)
scaffold0597 (23-122)||(2805-2903)
[»] scaffold0125 (2 HSPs)
scaffold0125 (3-88)||(29756-29841)
scaffold0125 (79-119)||(29879-29919)
[»] scaffold0077 (2 HSPs)
scaffold0077 (7-88)||(21626-21707)
scaffold0077 (65-119)||(21556-21610)
[»] scaffold0342 (1 HSPs)
scaffold0342 (2-86)||(2453-2537)
[»] scaffold0184 (4 HSPs)
scaffold0184 (4-88)||(33506-33590)
scaffold0184 (83-121)||(32863-32901)
scaffold0184 (79-120)||(33602-33643)
scaffold0184 (85-121)||(33577-33613)
[»] scaffold0078 (4 HSPs)
scaffold0078 (4-88)||(39254-39338)
scaffold0078 (83-121)||(39943-39981)
scaffold0078 (79-120)||(39201-39242)
scaffold0078 (85-121)||(39231-39267)
[»] scaffold0116 (2 HSPs)
scaffold0116 (7-88)||(28071-28152)
scaffold0116 (7-90)||(28123-28206)
[»] scaffold0396 (1 HSPs)
scaffold0396 (5-88)||(13905-13988)
[»] scaffold0134 (2 HSPs)
scaffold0134 (3-70)||(25673-25740)
scaffold0134 (24-96)||(25727-25799)
[»] scaffold0338 (1 HSPs)
scaffold0338 (5-58)||(7131-7184)
[»] scaffold0191 (3 HSPs)
scaffold0191 (23-88)||(502-567)
scaffold0191 (79-120)||(407-448)
scaffold0191 (84-120)||(436-472)
[»] scaffold0138 (1 HSPs)
scaffold0138 (7-88)||(26569-26650)
[»] scaffold0034 (4 HSPs)
scaffold0034 (5-62)||(77745-77802)
scaffold0034 (80-122)||(36160-36202)
scaffold0034 (80-119)||(36113-36152)
scaffold0034 (3-33)||(77826-77856)
[»] scaffold0407 (1 HSPs)
scaffold0407 (4-88)||(6400-6484)
[»] scaffold0253 (1 HSPs)
scaffold0253 (20-88)||(14967-15035)
[»] scaffold0346 (1 HSPs)
scaffold0346 (5-88)||(15926-16009)
[»] scaffold0218 (1 HSPs)
scaffold0218 (79-122)||(6895-6938)
[»] scaffold0025 (2 HSPs)
scaffold0025 (79-122)||(144976-145019)
scaffold0025 (79-122)||(147235-147278)
[»] scaffold0011 (5 HSPs)
scaffold0011 (79-122)||(125078-125121)
scaffold0011 (14-88)||(256634-256708)
scaffold0011 (79-120)||(72097-72138)
scaffold0011 (79-120)||(76478-76519)
scaffold0011 (79-120)||(192947-192988)
[»] scaffold0434 (2 HSPs)
scaffold0434 (4-62)||(3053-3111)
scaffold0434 (80-122)||(3097-3139)
[»] scaffold0102 (1 HSPs)
scaffold0102 (14-88)||(37880-37954)
[»] scaffold0292 (3 HSPs)
scaffold0292 (7-88)||(17855-17936)
scaffold0292 (79-119)||(18002-18042)
scaffold0292 (80-120)||(18025-18065)
[»] scaffold0049 (3 HSPs)
scaffold0049 (7-88)||(30770-30851)
scaffold0049 (79-120)||(30964-31005)
scaffold0049 (79-119)||(30917-30957)
[»] scaffold0044 (5 HSPs)
scaffold0044 (23-88)||(94423-94488)
scaffold0044 (79-120)||(94665-94706)
scaffold0044 (79-119)||(94570-94610)
scaffold0044 (84-120)||(94641-94677)
scaffold0044 (84-120)||(94617-94653)
[»] scaffold0001 (2 HSPs)
scaffold0001 (23-88)||(75551-75616)
scaffold0001 (79-120)||(166125-166166)
[»] scaffold0008 (2 HSPs)
scaffold0008 (14-62)||(21006-21054)
scaffold0008 (14-88)||(28570-28644)
[»] scaffold0467 (1 HSPs)
scaffold0467 (79-122)||(11705-11748)
[»] scaffold0132 (1 HSPs)
scaffold0132 (83-122)||(41157-41196)
[»] scaffold0004 (1 HSPs)
scaffold0004 (83-122)||(197772-197811)
[»] scaffold0171 (1 HSPs)
scaffold0171 (14-88)||(31156-31230)
[»] scaffold0692 (1 HSPs)
scaffold0692 (14-86)||(1120-1192)
[»] scaffold0068 (1 HSPs)
scaffold0068 (23-87)||(59986-60050)
[»] scaffold0106 (1 HSPs)
scaffold0106 (79-122)||(39970-40013)
[»] scaffold0240 (1 HSPs)
scaffold0240 (14-88)||(5964-6038)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-88)||(26490-26564)
[»] scaffold0021 (1 HSPs)
scaffold0021 (14-88)||(138480-138554)
[»] scaffold0450 (1 HSPs)
scaffold0450 (23-88)||(4530-4595)
[»] scaffold0384 (1 HSPs)
scaffold0384 (4-33)||(202-231)
[»] scaffold0158 (1 HSPs)
scaffold0158 (79-112)||(23259-23292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (29-89)||(145282-145342)


Alignment Details
Target: chr3 (Bit Score: 122; Significance: 8e-63; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22273334 - 22273213
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22273334 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 22273235  T
Q  101 tgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||    
T  22273234 tgattaatgattattcatgata 22273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2451142 - 2451263
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2451142 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaata 2451241  T
Q  101 tgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||    
T  2451242 tgattaatgattattcatgata 2451263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 18908977 - 18908858
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  18908977 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgatacatgtaattggtgattgttcatgaaatgtg 18908878  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  18908877 attaatgattattcatgata 18908858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 49230594 - 49230475
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| |||||||| ||||||||||||| |||||||||||||    
T  49230594 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattaattattattcatgatacatgtaattggtgatttttcatgaaatgtg 49230495  T
Q  103 attaatgattattcatgata 122  Q
    |||| |||||||||||||||    
T  49230494 attagtgattattcatgata 49230475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 11813263 - 11813145
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||  || || |||||||||||||||||||||||||    
T  11813263 tgattattcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacccatgtgattggtgattgttcatgaaatgtga 11813164  T
Q  104 ttaatgattattcatgata 122  Q
    ||||||| |||||||||||    
T  11813163 ttaatgactattcatgata 11813145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 7852046 - 7851927
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||  |||||||||||||||| ||    
T  7852046 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattaatgattgttcatgaaatatg 7851947  T
Q  103 attaatgattattcatgata 122  Q
    ||| | |||| |||||||||    
T  7851946 attgaggattgttcatgata 7851927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 11813113 - 11813017
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| || |||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11813113 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcatgaaacatgtaattggtgattgttcatgaaatatgattaatgattattcatg 11813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 16819245 - 16819162
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||    
T  16819245 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtga 16819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11813005 - 11812920
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  11813005 gtgattgttcatgatgtatatgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 11812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 38166418 - 38166333
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  38166418 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 38166333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19945009 - 19944924
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  19945009 gtgattgttcatgatgtatatgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 19944924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 49230486 - 49230425
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49230486 ttattcatgatacaagtaattggtgattgttcatgaaatgtgattattgattattcatgata 49230425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 30141187 - 30141103
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  30141187 tgattgttcatgatgtatatgattggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacatgtgattgatgatt 30141103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12796913 - 12796843
Alignment:
Q  18 gtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  12796913 gtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 12796843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 16819363 - 16819257
Alignment:
Q  13 atgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgatt 112  Q
    ||||||| | |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || |||||| |||||||||||||| ||||||||||||    
T  16819363 atgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtaattgttcatgaaatatgattaatgatt 16819264  T
Q  113 attcatg 119  Q
     ||||||    
T  16819263 gttcatg 16819257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 7852154 - 7852058
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| |||||||||||||| |||||| ||  || || |||||| | ||  |||||||||||||||||||| |||||||||||| ||||||    
T  7852154 tgattggtgattgtgtatgaataactatgaattaatgattgttcatgatatacgtggttggtgattgttcatgaaatatgattaatgattgttcatg 7852058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 51160142 - 51160216
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  51160142 tgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 51160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13816076 - 13815996
Alignment:
Q  8 tgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||  || || |||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  13816076 tgttcatgataaatgtggttggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 13815996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 17936657 - 17936601
Alignment:
Q  6 attgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||||||| |||||||||||| || |||||||||||||||| |||||||||||    
T  17936657 attgttcatgatatatatgattggtaattgtgtatgaataactgtaaattgatattt 17936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 10737044 - 10737001
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  10737044 attggtgattgttcatgaaatgtgattattgattattcatgata 10737001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 19262687 - 19262730
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19262687 attggtgattgttcatgaaatgtgattaatgactattcatgata 19262730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 33340328 - 33340285
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  33340328 attggtgattgttcatgaaatgtggttaatgattattcatgata 33340285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 45581321 - 45581278
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  45581321 attggtgattgttcatgaaatgtgattaatgactattcatgata 45581278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 2048546 - 2048505
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  2048546 attggtgattgttcatgaaatgtgattaatgactattcatga 2048505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 7851884 - 7851803
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||| || ||| |||| | |||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  7851884 ttgttcatgatatatgtggttgatgattgagtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 7851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 30204880 - 30204815
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  30204880 tgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 30204815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 19230538 - 19230495
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  19230538 attggtgaatattcatgaaatgtgattaatgattattcatgata 19230495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 17099107 - 17099033
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||| ||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  17099107 tgatatatgtgattggtgattgtgtgtgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 17099033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 11062776 - 11062841
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||||||||||||||||||||||||  || || |||| ||| || ||||||||||    
T  11062776 tgattggtgattgtgtatgaataactgtgaattgatgattgttcatgacacatgtgattggtgatt 11062841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 23490991 - 23490950
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  23490991 attggtgattgttcgtgaaatgtgattaatgactattcatga 23490950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 7851940 - 7851873
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgata 72  Q
    ||||||||||||| ||| || ||| || | | |||||||||||||||||||||||||| || ||||||    
T  7851940 gattgttcatgatatatgtggttgatggttgagtatgaataactgtgaattgatatttgttcatgata 7851873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 11813318 - 11813275
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||| |||||||||||||||| |||||||| |||||||||||||    
T  11813318 attgctgattgttcatgaaatttgattaataattattcatgata 11813275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 122
Target Start/End: Complemental strand, 38166515 - 38166484
Alignment:
Q  91 tcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||    
T  38166515 tcatgaaatgtgattaatgattattcatgata 38166484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 47786551 - 47786586
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgat 58  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47786551 tgattggtgattgtgtatgaataactgtgaattgat 47786586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 18909029 - 18908999
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  18909029 gtgattgttcatgatgtatatgattggtgat 18908999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 19945085 - 19945055
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  19945085 gtgattgttcatgatgtatatgattggtgat 19945055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 22273384 - 22273354
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  22273384 gtgattgttcatgatgtatatgattggtgat 22273354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 50113797 - 50113855
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgata 72  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||||||  ||||| ||||||    
T  50113797 tgatatatgtgattggtgattgtgtatgaataactgtggattgatgattattcatgata 50113855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 319298 - 319363
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| |||| |||||| ||| || |||| ||| || ||||||||||    
T  319298 tgattggtgattgtgtatgaataattgtgcattgatgtttgttcatgacacatgtgattggtgatt 319363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8630247 - 8630162
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| |||||||||  ||| |||||||| || ||| |||||||||||| ||||||||||| || |||| ||| || ||||| ||||    
T  8630247 gtgagtgttcatgacatatgtgattggtaattgtgcatgaataactgtaaattgatatttgttcatgacacatgtgattggagatt 8630162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 25057258 - 25057217
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  25057258 attggtgattgttcgtgaaatgtgactaatgactattcatga 25057217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 30141244 - 30141203
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||| ||||||||| |||| |||||||    
T  30141244 attggtgattgttcatgaattgtgattaacgattgttcatga 30141203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 8630299 - 8630259
Alignment:
Q  80 ttggtgattgttcatgaaatgtga-ttaatgattattcatg 119  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  8630299 ttggtgattgttcatgaaatgtgatttgatgattattcatg 8630259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 18738171 - 18738119
Alignment:
Q  10 ttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||| ||| | |||||| || |||||||||||||||| |||||||||||    
T  18738171 ttcatgatatatgtaattggtaattgtgtatgaataactgtaaattgatattt 18738119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 54049611 - 54049651
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||| |||||||||||||||||| | ||||||    
T  54049611 attggtgattgtttatgaaatgtgattaatgaatgttcatg 54049651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 25173816 - 25173697
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25173816 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 25173717  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  25173716 attaatgattattcatgata 25173697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 4989286 - 4989167
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  4989286 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgttaattgatatttattcatgatacatgtaattggtgattgttcatgaaatgtg 4989187  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  4989186 attaatgattattcatgata 4989167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 16827652 - 16827771
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||||| || |||||||| ||||||||| |||||||||||||||||    
T  16827652 gtgattgttcatgatttatatgattggtgattatgtatgaataactgttaattgatatttgttcatgatacatgtaattggtaattgttcatgaaatgtg 16827751  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  16827752 attaatgattattcatgata 16827771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 18843697 - 18843782
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  18843697 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 18843782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 23975913 - 23975828
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  23975913 gtgagtgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 23975828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 33316402 - 33316487
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  33316402 gtgattgttcatgatgtaaatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacacgtgattggtgatt 33316487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 18004847 - 18004931
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||| || ||||||||||    
T  18004847 tgattgttcatgatgtatatgattggtgattgtgtatgaatgactgtgaattgatatttgttcatgacacatgtgattggtgatt 18004931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 16827760 - 16827821
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16827760 ttattcatgatacatgtaattggtgattgttcatgaaatgtgattaatgattattcatgata 16827821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18579038 - 18578953
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||| ||| || ||||||||||    
T  18579038 gtgattcttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgtccatgacacatgtgattggtgatt 18578953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 18825636 - 18825721
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  18825636 gtgattgttcatgatgtatatgattggtgattgttcatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 18825721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 23976021 - 23975925
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  23976021 tgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 23975925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 35017442 - 35017525
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  35017442 gattgttcatgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 35017525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 33316274 - 33316390
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttc--atgaaatgt 101  Q
    ||||| || ||||||| |||||||| |||| ||| |||||||  ||||||||||||||| ||| ||||||| || |||||| |||||||  ||||||| |    
T  33316274 tgattattgatgatgt-tatgattgatgattgtgaatgaatatttgtgaattgatatttgtttctgatacatgtgattggtaattgttcatatgaaatat 33316372  T
Q  102 gattaatgattattcatg 119  Q
    ||||||||||| ||||||    
T  33316373 gattaatgattgttcatg 33316390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 14628377 - 14628442
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  14628377 tgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 14628442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 19627698 - 19627617
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||| || |||| ||| || |||| |||||    
T  19627698 ttgttcacgatatatatgattggtgattgtgtatgaatagctgtgaattgatatttgttcatgacacatgtgattgatgatt 19627617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 35011116 - 35011197
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  35011116 ttgttcacgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 35011197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 18004769 - 18004860
Alignment:
Q  29 gtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||| ||| |||||||  ||||||||||||||  ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||||    
T  18004769 gtgattgtgaatgaatagttgtgaattgatattg-ttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatgat 18004860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 18128645 - 18128602
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  18128645 attggtgattgttcatgaaatgtgattaatgattgttcatgata 18128602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 19984876 - 19984919
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  19984876 attggtgattgttcatgaaatgagattaatgattattcatgata 19984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 13622940 - 13623005
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||  ||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  13622940 tgattggtgattatgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 13623005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 18128541 - 18128484
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||| ||| |||||||| || |||||||||||||||| |||||||||||    
T  18128541 gattgttcatgatatatgtgattggtaattgtgtatgaataactgtaaattgatattt 18128484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 18775690 - 18775625
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||||||| ||| || ||||||||||    
T  18775690 tgattggtgattgtgtatgaataattgtgaattgatttttgtttatgacacatgtgattggtgatt 18775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 32896458 - 32896393
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||| ||| || ||||||||||    
T  32896458 tgattggtgattgtgtatgaataactgtgaattgatgtttgttcatgacacatgtgattggtgatt 32896393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 16238762 - 16238723
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  16238762 tgattggtgattgtgtatgaataactgtgaattgatattt 16238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 18422229 - 18422182
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatt 61  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  18422229 tgatgtatgtgattggtgattgtgtatgaataattgtgaattgatatt 18422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31626933 - 31626859
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| |||||||| |||||| || |||| ||| || ||||||||||    
T  31626933 tgatatatgtgattggtgattgtgtatgaataattgtgaattaatatttgttcatgacacatgtgattggtgatt 31626859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13622869 - 13622910
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  13622869 attggtgattattcatgaaatgtgattaatgattgttcatga 13622910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 18004721 - 18004762
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  18004721 attggtgattgttcgtgaaatgtgattaacgattattcatga 18004762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 18128693 - 18128652
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  18128693 attggtgattgttcatgaattgtgattaatgattgttcatga 18128652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 18128595 - 18128555
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  18128595 attggtgattgttcatgaaatgtgattgatgattgttcatg 18128555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 18128765 - 18128725
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  18128765 attggtgattgttcatgaaatgtgattgatgattgttcatg 18128725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 18579090 - 18579050
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  18579090 attggtgattgttcatgaaatatgattaatgattgttcatg 18579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 19627754 - 19627714
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  19627754 attggtgattgttcatgaaatgtgattaatgaatgttcatg 19627714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 35011060 - 35011100
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  35011060 attggtgattgttcatgaaatgtgattaatgaatgttcatg 35011100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 14628323 - 14628390
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgt 90  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||    
T  14628323 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgt 14628390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 13016526 - 13016584
Alignment:
Q  28 ggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    |||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||    
T  13016526 ggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtga 13016584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 18825608 - 18825650
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  18825608 attggtgattgttcatgaaatgtgattggtgattgttcatgat 18825650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 25173842 - 25173812
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  25173842 gtgattgttcatgatgtatatgattggtgat 25173812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 25173900 - 25173870
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  25173900 gtgattgttcatgatgtatatgattggtgat 25173870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 25646592 - 25646666
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||| ||||||  ||||||||||||||| || |||| ||| || ||||||||||    
T  25646592 tgatatatttgattggtgattgtgtgtgaatagttgtgaattgatatttgttcatgacacatgtgattggtgatt 25646666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 18128717 - 18128676
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  18128717 attggtgattgttcatgaaatgtgattggtgattgttcatga 18128676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 16238828 - 16238792
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  16238828 tgattgttcatgaaatgttattgatgattattcatga 16238792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 18843671 - 18843711
Alignment:
Q  81 tggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||  ||||| ||||||||    
T  18843671 tggtgattgttcatgaaatgtgattggtgattgttcatgat 18843711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 35017389 - 35017429
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||| |||||||| ||||||||||||||||| |||||||    
T  35017389 ttggtggttgttcataaaatgtgattaatgattgttcatga 35017429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25424964 - 25424843
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25424964 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaatgactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 25424865  T
Q  101 tgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||    
T  25424864 tgattaatgattattcatgata 25424843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 29192556 - 29192675
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29192556 gtgattgttcatgatgtatatgatcggtgattgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 29192655  T
Q  103 attaatgattattcatgata 122  Q
    || |||||||||||||||||    
T  29192656 atcaatgattattcatgata 29192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 10639 - 10523
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||| ||    
T  10639 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgatacatgtgattggtgattgttcatgaaatatg 10540  T
Q  103 attaatgattattcatg 119  Q
    |||||||||| ||||||    
T  10539 attaatgattgttcatg 10523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 22368326 - 22368445
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || | |||||| |||||||||||||||||||||||||||    
T  22368326 gtgagtgttcatgatgtatatgattggtgattgtgtatgaataactgttaattgatatttgttcaggatacatgtaattggtgattgttcatgaaatgtg 22368425  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||| ||||    
T  22368426 attaatgattattcaggata 22368445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 110877 - 110994
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || || |||||||| ||||||||| |||||||||||||||||    
T  110877 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgttaattgata-ttgttcatgatacatgtaattggt-attgttcatgaaatgtg 110974  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  110975 attaatgattattcatgata 110994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 16534689 - 16534570
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||| || || ||||||||  |||||||||||| | ||||||| |||    
T  16534689 gtgattgttcatgatgtatatgattggtgattgcgtatgaataactgtgaatagataattgttcatgatacatttaattggtgattttccatgaaacgtg 16534590  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  16534589 attaatgattattcatgata 16534570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 11340949 - 11340828
Alignment:
Q  3 gtgattgttcatgat--gtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||||||| ||||||||||||| |||||||||||    
T  11340949 gtgattgttcatgatatgtatatgattggtgattgtgtatgaataactgtgaattaattattagtcatgatacatgtaattggtgatttttcatgaaatg 11340850  T
Q  101 tgattaatgattattcatgata 122  Q
    |||||| |||||||||||||||    
T  11340849 tgattagtgattattcatgata 11340828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 25944472 - 25944570
Alignment:
Q  24 gattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||| ||| |||||||  ||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  25944472 gattggtgattgtgaatgaatatttgtgaattgatatttgttcatgatacatgtaattggtgattgttcatgaaatgtgattaattattattcatgata 25944570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 10511 - 10426
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  10511 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 10426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 1221627 - 1221712
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  1221627 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 1221712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 11340839 - 11340778
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11340839 ttattcatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 11340778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 11582340 - 11582235
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgatta 113  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||||| || || | ||| || ||||||||||||||||||||| | ||||||||||     
T  11582340 tgatgtatgtgattggagattgtgtatgaataactgtgaattgatatttgttcattacacatgtgattggtgattgttcatgaaatattattaatgattg 11582241  T
Q  114 ttcatg 119  Q
    ||||||    
T  11582240 ttcatg 11582235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19498140 - 19498055
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  19498140 gtgattgttcatgaagtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 19498055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43445697 - 43445782
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  43445697 gtgactgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 43445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 10780102 - 10780186
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||| || ||||||||||    
T  10780102 tgattgttcatgatgtatatgattggtgattgtgtatgaatgactgtgaattgatatttgttcatgacacatgtgattggtgatt 10780186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 22885030 - 22885110
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattgg 83  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  22885030 gtgattgttcatgatgtatatgattggtggttgtgtatgaataactgtgaattgatatttgttcatgacacatgtaattgg 22885110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 18780001 - 18780056
Alignment:
Q  67 atgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18780001 atgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 18780056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 1221519 - 1221615
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  1221519 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 1221615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 9732586 - 9732666
Alignment:
Q  8 tgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| || |||| ||| || ||||||||||    
T  9732586 tgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatctttgttcatgacacatgtgattggtgatt 9732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 9732478 - 9732595
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||    
T  9732478 tgattattgatgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatga 9732577  T
Q  104 ttaatgattattcatgat 121  Q
    ||||||| | ||||||||    
T  9732578 ttaatgactgttcatgat 9732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 11580123 - 11580039
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  11580123 tgattgttcatgatgtatatgattggtgactgcgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 11580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 43445589 - 43445685
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||| ||||||||||||||| |||||||||||| ||||||    
T  43445589 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggcgattgttcatgaaatatgattaatgattgttcatg 43445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 11341102 - 11340987
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || | ||||||||||||||||||| |||    
T  11341102 tgattattgatgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgaatggtgattgttcatgaaatatga 11341003  T
Q  104 ttaatgattattcatg 119  Q
    ||||||||| ||||||    
T  11341002 ttaatgattgttcatg 11340987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 28257979 - 28257896
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  28257979 gattgttcatgatgtatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 28257896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 35793061 - 35793116
Alignment:
Q  67 atgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35793061 atgatacatgtaattggtgattgttcatgaaatgtgattaattattattcatgata 35793116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 10780018 - 10780115
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||||||||| ||| |||||||  ||||||||||||||  ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||||    
T  10780018 tgattggtgattgtgaatgaatatttgtgaattgatattg-ttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatgat 10780115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 22368442 - 22368495
Alignment:
Q  69 gatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22368442 gatacatgtaattggtgattgttcatgaaatgtcattaatgattattcatgata 22368495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 34937771 - 34937690
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  34937771 ttgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 34937690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 17473688 - 17473775
Alignment:
Q  3 gtgattgttcatgatgtata--tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| || |||| | | || ||||||||||    
T  17473688 gtgattgttcatgaagtatatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacatatgtgattggtgatt 17473775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 19498247 - 19498152
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| ||| |||||||| ||||||    
T  19498247 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatga-taatgattgttcatg 19498152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 35793105 - 35793166
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| |||||||| |||| | |||||| |||||||||||||||||||||||||||||||||    
T  35793105 ttattcatgatacatgtaaattgtgatttttcatgaaatgtgattaatgattattcatgata 35793166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 10779969 - 10780010
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  10779969 attggtgattgttcatgaaatatgattaatgattattcatga 10780010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 21653185 - 21653226
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  21653185 attggtgattgttcatgaaatgtgattaatgattgttcatga 21653226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 21661408 - 21661473
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  21661408 tgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 21661473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 25944422 - 25944463
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  25944422 attggtgattgttcatgaaatgtgattaatgattgttcatga 25944463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 1171286 - 1171328
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  1171286 ttggtgattgtttatgaaatgtgattgatgattattcatgata 1171328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 25211799 - 25211864
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||  ||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  25211799 tgattggtgattctgtatgaataaatgtgaattgatatttgttcatgacacatgtgattggtgatt 25211864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 25275951 - 25276016
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||  ||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  25275951 tgattggtgattctgtatgaataaatgtgaattgatatttgttcatgacacatgtgattggtgatt 25276016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 22368274 - 22368314
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  22368274 attggtgattgttcatgaaatatgattaatgattgttcatg 22368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 34937827 - 34937787
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  34937827 attggtgattgttcatgaaatgtgattaatgaatgttcatg 34937787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 10691 - 10661
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  10691 gtgattgttcatgatgtatatgattggtgat 10661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 18779939 - 18779969
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  18779939 gtgattgttcatgatgtatatgattggtgat 18779969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 35792999 - 35793029
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  35792999 gtgattgttcatgatgtatatgattggtgat 35793029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 21653137 - 21653178
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  21653137 attggtgattgttcatgaaatgtgattggtgattgttcatga 21653178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 23986155 - 23986212
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||| ||| ||| ||| || |||| ||||||||||||||||||||| ||||||    
T  23986155 gattgttcacgatatatgtgaatgatgattgtgtatgaataactgtgaattaatattt 23986212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19888620 - 19888741
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19888620 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactatgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 19888719  T
Q  101 tgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||    
T  19888720 tgattaatgattattcatgata 19888741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 8942010 - 8941891
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8942010 gtgattgttcatgatgtatatgattggtgatcgtgtatgaatgactgtgaattgatatgtatttatgatacaagtaattggtgattgttcatgaaatgtg 8941911  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  8941910 attaatgattattcatgata 8941891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 25211191 - 25211072
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || || |||||||||||||||||||| |||||||||||||||    
T  25211191 gtgattgttcatgatgtatatgattggtgattgtgtatgaataattgtgaattgataattgttcatgatacaagtaattggtgactgttcatgaaatgtg 25211092  T
Q  103 attaatgattattcatgata 122  Q
    |||||| |||||||||||||    
T  25211091 attaataattattcatgata 25211072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3800956 - 3801077
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| |||||||| ||||||||||||| |||||||||||    
T  3800956 cagtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattaattattattcatgatacatgtaattggtgatttttcatgaaatg 3801055  T
Q  101 tgattaatgattattcatgata 122  Q
    |||||| |||||||||||||||    
T  3801056 tgattagtgattattcatgata 3801077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 34822662 - 34822544
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | |||||| |||| ||| |||||||  |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  34822662 tgattattgatgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttattcatgatacatgtaattggtgatttttcatgaaatgtga 34822563  T
Q  104 ttaatgattattcatgata 122  Q
    ||| |||||||||||||||    
T  34822562 ttagtgattattcatgata 34822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 21276331 - 21276416
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  21276331 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 21276416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 3801066 - 3801127
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3801066 ttattcatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 3801127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12643801 - 12643886
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || |||| ||| || ||||||||||    
T  12643801 gtgattgttcatgatgtatatgattggtgattgtgtacgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 12643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 34822555 - 34822494
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34822555 ttattcatgatacaagtaatttgtgattgttcatgaaatgtgattaatgattattcatgata 34822494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 38706753 - 38706814
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38706753 ttattcatgatacaagtaattggtgattgttcctgaaatgtgattaatgattattcatgata 38706814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 12643693 - 12643789
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| |||||||||||  | ||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  12643693 tgattggtgattgtgtatgaatatttctgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 12643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 25600410 - 25600327
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  25600410 gattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 25600327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 3800814 - 3800920
Alignment:
Q  13 atgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgatt 112  Q
    ||||||| | |||||| |||| ||| |||||||  ||||||||||||||||||  ||||||| || | ||||||||||||||||||| ||||||||||||    
T  3800814 atgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttattcctgatacatgtgaatggtgattgttcatgaaatatgattaatgatt 3800913  T
Q  113 attcatg 119  Q
     ||||||    
T  3800914 gttcatg 3800920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12637983 - 12638068
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||| ||||||    
T  12637983 gtgactgttcatgatgcatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattagtgatt 12638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 12637875 - 12637971
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  12637875 tgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 12637971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 20629103 - 20629146
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20629103 attggtgattgttcatgaaatgtgattaatgattattcatgata 20629146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 461150 - 461107
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  461150 attggtgattgttcatgagatgtgattaatgattattcatgata 461107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 22273374 - 22273335
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22273374 gtgattgttcatgaaatgtgattaatgattattcatgata 22273335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 22282607 - 22282568
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22282607 gtgattgttcatgaaatgtgattaatgattattcatgata 22282568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 42180202 - 42180283
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||| || |||| ||| || |||| |||||    
T  42180202 ttgttcacgatatatgtgattggtgattgtgtatgaatagctgtgaattgatatttgttcatgacacatgtgattgatgatt 42180283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 9654576 - 9654619
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  9654576 attggtgactgttcatgaaatgttattaatgattattcatgata 9654619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 25877692 - 25877766
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  25877692 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 25877766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 36892434 - 36892508
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || || | ||| || ||||||||||    
T  36892434 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcataacacatgtgattggtgatt 36892508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 24966606 - 24966541
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||  ||||||||||||||||||||||||||| || |||| |||  | ||||||||||    
T  24966606 tgattggtgattatgtatgaataactgtgaattgatatttgttcatgacacatatgattggtgatt 24966541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 24966701 - 24966660
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  24966701 attggtgattattcatgaaatgtgattaatgattgttcatga 24966660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 7513799 - 7513839
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  7513799 attggtgattgttcatgaaatgtgattaatgaatgttcatg 7513839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 24966672 - 24966636
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||| ||||||||||||||    
T  24966672 tgattgttcatgaaatgtgattgatgattattcatga 24966636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 42180146 - 42180186
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  42180146 attggtgattgttcatgaaatgtgattaatgaatgttcatg 42180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 43644681 - 43644717
Alignment:
Q  86 attgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| ||||||||||||||||||||||||||||    
T  43644681 attgttcacgaaatgtgattaatgattattcatgata 43644717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 461118 - 461064
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattatt 115  Q
    ||||| |||||| | || |||||||||| ||||||| ||||||||||||||||||    
T  461118 ttattcatgataaatgtgattggtgattcttcatgagatgtgattaatgattatt 461064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 15631823 - 15631765
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatt 61  Q
    ||||||||||||||| |||||||||| | || |||||||||||| ||| | ||||||||    
T  15631823 gtgattgttcatgatatatatgattgataatggtgtatgaataattgtaagttgatatt 15631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 25211243 - 25211213
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  25211243 gtgattgttcatgatgtatatgattggtgat 25211213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 6877924 - 6877859
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| ||||||||||| ||| || |||| ||| || | ||||||||    
T  6877924 tgattggtgattgtgtatgaataattgtgaattgatgtttgttcatgacacatgtgaatggtgatt 6877859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17147120 - 17146999
Alignment:
Q  1 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17147120 cagtgattgttcatgatgtatatgattggtgatcgtgtatgaatgactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatg 17147021  T
Q  101 tgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||    
T  17147020 tgattaatgattattcatgata 17146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 15863210 - 15863329
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||    
T  15863210 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatacttgttcatgatacatgtaattggtgattgttcatgaaatgtg 15863309  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  15863310 attaatgattattcatgata 15863329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 41217876 - 41217761
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    |||||||||||||  || || |||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||||||||||||||||||    
T  41217876 gattgttcatgataaatgtggttggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtgat 41217777  T
Q  105 taatgattattcatga 120  Q
    |||||||| |||||||    
T  41217776 taatgattgttcatga 41217761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 22250765 - 22250849
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgat 87  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| || |||| ||| ||||||||||||    
T  22250765 gtgattgttcatgatgtatatgattggtggttgtgtatgaataactgtgaattgatatttgttcatgacacatgtaattggtgat 22250849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 22352563 - 22352464
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| ||||| ||||||||||||||||    
T  22352563 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattgatgattattcatgata 22352464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 41217748 - 41217665
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  41217748 gattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 41217665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20895504 - 20895588
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||  || || |||||||| |||||||||||||| ||||||||||||| ||||||| ||| || ||||||||||    
T  20895504 tgattgttcatgataaatgtggttggtgattgtgtatgaataactatgaattgatatttgtttatgacacatgtgattggtgatt 20895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 20444225 - 20444182
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20444225 attggtgattgttcatgaaatgtgattaatgattattcatgata 20444182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 37846151 - 37846194
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37846151 attggtgattgttcatgaaatgtgattaatgattattcatgata 37846194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 20252542 - 20252461
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||  || |||||||| || |||| |||||    
T  20252542 ttgttcacgatatatgtgattggtgattgtgtatgaataactgtgaattgatattcgttcatgatacatgtgattgatgatt 20252461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 20895475 - 20895518
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  20895475 attggtgattgttcatgaaatgtgattaatgattgttcatgata 20895518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 20529960 - 20529922
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20529960 tgattgttcatgaaatgtgattaatgattattcatgata 20529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 44036576 - 44036614
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44036576 gtgattgttcatgaaatgtgattaatgattattcatgat 44036614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 2422816 - 2422881
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  2422816 tgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 2422881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 20529989 - 20529948
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  20529989 attggtgattgttcatgaaatgtgattaatgattgttcatga 20529948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 22352612 - 22352571
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22352612 attggtgattgttcatgaaatgtgattaatgactattcatga 22352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 41217930 - 41217889
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  41217930 attggtgattgttcatgaaatgtgattaatgattgttcatga 41217889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 20589808 - 20589847
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  20589808 ttggtgattgttcatgaaatgtgattaatgattgttcatg 20589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 20589758 - 20589800
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  20589758 ttggtgattgttcatgaaatgtgactaatgattgttcatgata 20589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 9786114 - 9786171
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||| ||| |||| ||| || |||||||||||||||| |||||||||||    
T  9786114 gattgttcatgatatatgtgatgggtaattgtgtatgaataactgtaaattgatattt 9786171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 20929961 - 20929924
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20929961 gtgattgtccatgaaatgtgattaatgattattcatga 20929924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 22365166 - 22365125
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  22365166 attggtgattgttcgtgaaatgtgattaatgactattcatga 22365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 20252598 - 20252558
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  20252598 attggtgattgttcatgaaatgtgattaatgaatgttcatg 20252558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 20589858 - 20589897
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  20589858 ttggtgattgttcatgaaatgtgattgatgattgttcatg 20589897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 9786009 - 9786051
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||| ||||||||||||| |||||||||||||| |||||||||    
T  9786009 ttggcgattgttcatgaattgtgattaatgattgttcatgata 9786051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 22407968 - 22408042
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||| ||||||| |||||||||||||||  | |||| ||| || ||||||||||    
T  22407968 tgatatatgtgattggtgattgtgtgtgaataattgtgaattgatatttgctcatgacacatgtgattggtgatt 22408042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 35053312 - 35053250
Alignment:
Q  26 ttggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||| |||||||||||| ||||||||||| ||| || |||| ||| || ||||||||||    
T  35053312 ttggtgattgtgtatgaataattgtgaattgatgtttgttcatgacacacgtgattggtgatt 35053250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 5676351 - 5676416
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| |||| ||||||| || || |||| ||| || ||||||||||    
T  5676351 tgattggtgattgtgtatgaataattgtgtattgataattgttcatgacacatgtgattggtgatt 5676416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 20252622 - 20252581
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  20252622 attggtgattgttcatgaaatgtgattggtgattgttcatga 20252581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 122
Target Start/End: Complemental strand, 21857958 - 21857930
Alignment:
Q  94 tgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||    
T  21857958 tgaaatgtgattaatgattattcatgata 21857930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 18246476 - 18246357
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18246476 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtggattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 18246377  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  18246376 attaatgattattcatgata 18246357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 16521100 - 16520981
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||| |||||||  ||||| |||||||| |||||||||||||||||||||||||||    
T  16521100 gtgattgttcatgatgcatatgattggtgattgtgtatgaataattgttaattgatgattattcatgatacatgtaattggtgattgttcatgaaatgtg 16521001  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  16521000 attaatgattattcatgata 16520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 19998863 - 19998746
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    |||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||| ||  ||||||| ||||||||||||| |||||||||||||||    
T  19998863 gattgttcatgaagtatatgattggtgattgtgtatgaatatttgtgaattgatatttgttcctgatacatgtaattggtgatttttcatgaaatgtgat 19998764  T
Q  105 taatgattattcatgata 122  Q
    || |||||||||||||||    
T  19998763 tagtgattattcatgata 19998746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 15211827 - 15211729
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||||||||| ||| |||| ||  | ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15211827 tgattggtgattgtgaatgagtatttttgaattgatatttgttcatgatacatgtaattggtgattgttcatgaaatgtgattaatgattattcatgat 15211729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 22356413 - 22356498
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||  | ||||||||||    
T  22356413 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttgttcatgacacatatgattggtgatt 22356498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 7134299 - 7134384
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  7134299 gtgattgttcatgatgtatatgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 7134384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8372811 - 8372726
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  8372811 gtgactgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 8372726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18167078 - 18166993
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  18167078 gtgattgttcatgatgtatatgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 18166993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 19998757 - 19998696
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19998757 ttattcatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 19998696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 26678381 - 26678322
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26678381 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatattt 26678322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 18167181 - 18167064
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | ||||||||||| ||| |||||||  ||||||||||||||| || |||||||| || ||||||||||||||||||||| |||    
T  18167181 tgattattgatgatgtttgtgattggtgattgtgaatgaatatttgtgaattgatatttgttcatgatacatgtgattggtgattgttcatgaaatatga 18167082  T
Q  104 ttaatgattattcatgat 121  Q
    ||  ||||| ||||||||    
T  18167081 ttggtgattgttcatgat 18167064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 34393663 - 34393576
Alignment:
Q  35 gtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||| || |||| ||| || ||||||||||||||||||||| ||||| | |||| |||||||||    
T  34393663 gtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatatgattgaggattgttcatgata 34393576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 7134159 - 7134239
Alignment:
Q  39 atgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||  ||||||||||||||||||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  7134159 atgaatatttgtgaattgatatttattcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 7134239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 8372919 - 8372823
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  8372919 tgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 8372823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 53909545 - 53909629
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  53909545 tgattgttcatgataaatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 53909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 26678508 - 26678393
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | |||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || |||||| |||||||||||||| |||    
T  26678508 tgattattgatgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtaattgttcatgaaatatga 26678409  T
Q  104 ttaatgattattcatg 119  Q
    ||||||||| ||||||    
T  26678408 ttaatgattgttcatg 26678393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 47355710 - 47355643
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatga 70  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||||    
T  47355710 gtgattgttcatgatgtatataattgatgattatgtatgaataactgtgaattgatatttgtttatga 47355643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 15274460 - 15274544
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||| ||||||||||||||||||| | || ||||||||||||||||||||||||| || || |||| ||| || ||||||||||    
T  15274460 tgattattcatgatgtatatgattgataattgtgtatgaataactgtgaattgatacttgttcatgacacatgtgattggtgatt 15274544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 19998972 - 19998877
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| ||| |||||||| ||||||    
T  19998972 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatga-taatgattgttcatg 19998877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 34393589 - 34393506
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||| || |||| | | || ||||||||||    
T  34393589 gattgttcatgatatatgtgattggcgattgtgtatgaataactgtgaattgatatttgttcatgacagatgtgattggtgatt 34393506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 109968 - 109925
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  109968 attggtgattgttcatgaaatgtgattaatgactattcatgata 109925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15211732 - 15211694
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15211732 tgattgttcatgaaatgtgattaatgattattcatgata 15211694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 15274431 - 15274473
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  15274431 attggtgattgttcatgaaatatgattaatgattattcatgat 15274473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 55378472 - 55378514
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  55378472 ttggtgattgttcatgaaatgtgattaatgattgttcatgata 55378514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 9293935 - 9293894
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  9293935 attggtgattgttcgtgaaatgtgattaatgattattcatga 9293894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 19699406 - 19699487
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||| || |||| ||| || |||| |||||    
T  19699406 ttgttcacgatatatgtgattggtgattgtgtatgaatagctgtgaattgatatttgttcatgacacatgtgattgatgatt 19699487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 19709991 - 19710072
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||| || |||| ||| || |||| |||||    
T  19709991 ttgttcacgatatatgtgattggtgattgtgtatgaatagctgtgaattgatatttgttcatgacacatgtgattgatgatt 19710072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 33738657 - 33738609
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  33738657 tgatgtatgtgattggtgattgtgtatgaataattgtgaattgatattt 33738609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 53909516 - 53909559
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  53909516 attggtgaatgttcatgaaatgtgattaatgattgttcatgata 53909559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 12837998 - 12838072
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || || | ||| || ||||||||||    
T  12837998 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcataacacatgtgattggtgatt 12838072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 22356340 - 22356378
Alignment:
Q  82 ggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  22356340 ggtgattgttcatgaaatgtgattaatgattgttcatga 22356378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 44054344 - 44054279
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||| ||| || | ||||||||    
T  44054344 tgattggtgattgtgtatgaataactgtgaattgatgtttgttcatgacacatgtgactggtgatt 44054279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 7134247 - 7134287
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  7134247 attggtgattgttcatgaaatatgattaatgattgttcatg 7134287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 19699350 - 19699390
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  19699350 attggtgattgttcatgaaatgtgattaatgaatgttcatg 19699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 19709935 - 19709975
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  19709935 attggtgattgttcatgaaatgtgattaatgaatgttcatg 19709975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 18246528 - 18246498
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  18246528 gtgattgttcatgatgtatatgattggtgat 18246498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 44345259 - 44345185
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||| |||| ||||||| ||  ||||||||||| || |||| ||| || ||||||||||    
T  44345259 tgatgtatatgtttggtgattgtgtgtgaataattggaaattgatatttgttcatgacacatgtgattggtgatt 44345185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 10642597 - 10642556
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| |||||||| |||||||| |||||||||    
T  10642597 attggtgattgttcgtgaaatgtaattaatgactattcatga 10642556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 12901456 - 12901521
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||||| ||||||||||||||||||  || || |||| ||| || ||||||||||    
T  12901456 tgattggtgattgtgtacgaataactgtgaattgattattgttcatgacacatgtgattggtgatt 12901521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 45460709 - 45460741
Alignment:
Q  26 ttggtgatcgtgtatgaataactgtgaattgat 58  Q
    |||||||| ||||||||||||||||||||||||    
T  45460709 ttggtgattgtgtatgaataactgtgaattgat 45460741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 47355769 - 47355697
Alignment:
Q  24 gattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatga 96  Q
    ||||| |||| ||| |||||||  ||||||||||||||| ||  |||||||  | ||||||||||||||||||    
T  47355769 gattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatatgattggtgattgttcatga 47355697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 53706604 - 53706636
Alignment:
Q  86 attgttcatgaaatgtgattaatgattattcat 118  Q
    ||||||||||||||||||||||||||| |||||    
T  53706604 attgttcatgaaatgtgattaatgattgttcat 53706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 54119978 - 54120018
Alignment:
Q  82 ggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  54119978 ggtgattattcatgaaatgtaattaatgattgttcatgata 54120018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 28836277 - 28836159
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28836277 tgattgttcatgacgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggcgattgttcatgaaatgtga 28836178  T
Q  104 ttaatgattattcatgata 122  Q
    |||||||||||||||||||    
T  28836177 ttaatgattattcatgata 28836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 3433388 - 3433489
Alignment:
Q  21 tatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  3433388 tatgattggtgattgtgtatgaataactgtgaattaattattattcatgatacatgtaattggtgatttttcatgaaatgtgattagtgattattcatga 3433487  T
Q  121 ta 122  Q
    ||    
T  3433488 ta 3433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 24108454 - 24108539
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  24108454 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 24108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 3433478 - 3433539
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3433478 ttattcatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 3433539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 13664539 - 13664624
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  13664539 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 13664624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 13723814 - 13723899
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  13723814 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 13723899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 22909332 - 22909416
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  22909332 tgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 22909416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 22008285 - 22008358
Alignment:
Q  48 tgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  22008285 tgtgaattgatatttgttcctgatacatgtaattggtgattgttcatgaaatatgattaatgattgttcatgat 22008358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 22323216 - 22323285
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgataca 74  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| || ||||||||    
T  22323216 gattgttcatgatgtatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgataca 22323285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 23509265 - 23509188
Alignment:
Q  10 ttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgat 87  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| || | || ||| || |||||||||    
T  23509265 ttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcaagacacatgtgattggtgat 23509188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 3433268 - 3433376
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | |||||| |||| ||| |||||||  ||||||||||||||||||  ||||||| || | ||||||||||||||||||| |||    
T  3433268 tgattattgatgatgtttgtgattgatgattgtgaatgaatatttgtgaattgatatttattcctgatacatgtgaatggtgattgttcatgaaatatga 3433367  T
Q  104 ttaatgatt 112  Q
    |||||||||    
T  3433368 ttaatgatt 3433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 13664431 - 13664527
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || |||||||||||||| |||||| |||||||||||| ||||||    
T  13664431 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcgtgaaatatgattaatgattgttcatg 13664527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 13723706 - 13723802
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || |||||||||||||| |||||| |||||||||||| ||||||    
T  13723706 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcgtgaaatatgattaatgattgttcatg 13723802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 23509378 - 23509284
Alignment:
Q  25 attggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  23509378 attgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 23509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 22008345 - 22008429
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||| || |||| ||| || ||||||||||    
T  22008345 tgattgttcatgatgtatataattgatgattgtgtatgaataactatgaaatgatatttgttcatgacacatgtgattggtgatt 22008429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 41508917 - 41509001
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| || || |||| ||| || | ||||||||    
T  41508917 tgattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgataattgttcatgacacatgtgagtggtgatt 41509001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 29758779 - 29758736
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  29758779 attggtgattgttcatgaaatgtgagtaatgattattcatgata 29758736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 43375271 - 43375314
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  43375271 attggtgactgttcatgaaatgtgattaatgattattcatgata 43375314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 24387378 - 24387416
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24387378 tgattgttcatgaaatgtgattaatgattattcatgata 24387416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 41508889 - 41508931
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  41508889 ttggtgattgttcatgaaatgtgattaatgattgttcatgata 41508931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 18610628 - 18610547
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||| |||||||||||||||| || |||| ||| || |||| |||||    
T  18610628 ttgttcacgatatatgtgattggtgattgtgtatgaatagctgtgaattgatatttgttcatgacacatgtgattgatgatt 18610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 22008225 - 22008266
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  22008225 attggtgattgttcatgaaatgtgattaatgactattcatga 22008266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 24930792 - 24930831
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  24930792 gtgattgttcatggaatgtgattaatgattattcatgata 24930831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 37605468 - 37605402
Alignment:
Q  22 atgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||| |||||||||||| |||| |||||||||| || |||| ||| || ||||||||||    
T  37605468 atgattggtgattgtgtatgaataattgtgtattgatatttgttcatgacacatgtgattggtgatt 37605402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13664382 - 13664423
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  13664382 attggtgattgttcgtgaaatgtgattaatgactattcatga 13664423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13723657 - 13723698
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  13723657 attggtgattgttcgtgaaatgtgattaatgactattcatga 13723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 20655757 - 20655822
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||||||||||||||||||||||||  || || |||| ||| || ||||||||||    
T  20655757 tgattggtgattgtgtatgaataactgtgaattgatgattgttcatgacacatgtgattggtgatt 20655822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 22909279 - 22909320
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  22909279 attggtgattgttcatgaaatgtgattaacgattgttcatga 22909320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 24719162 - 24719203
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  24719162 attggtgaatgttcatgaaatgtgattaatgattgttcatga 24719203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 24719316 - 24719397
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||||||||| |||||| |||||||| || |||| ||| || | ||||||||    
T  24719316 ttgttcacgatttatgtgattggtgattgtgtatgaataattgtgaagtgatatttgttcatgacacatgtgaatggtgatt 24719397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 18610684 - 18610644
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  18610684 attggtgattgttcatgaaatgtgattaatgaatgttcatg 18610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 22909309 - 22909345
Alignment:
Q  85 gattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22909309 gattgttcatgaaatgtgattaatgattgttcatgat 22909345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16041370 - 16041425
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||| ||| ||| |||| ||| || ||||||||||||||||||||||||||||    
T  16041370 ttgttcacgatatatgtgatgggtaattgtgtatgaataactgtgaattgatattt 16041425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16043046 - 16043101
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||| ||| ||| |||| ||| || ||||||||||||||||||||||||||||    
T  16043046 ttgttcacgatatatgtgatgggtaattgtgtatgaataactgtgaattgatattt 16043101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 24108426 - 24108468
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  24108426 attggtgattgttcatgaaatgtgattggtgattgttcatgat 24108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 16041314 - 16041354
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  16041314 attggtgatcgttcatgaaatgtgattaatgaatgttcatg 16041354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 16042990 - 16043030
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  16042990 attggtgatcgttcatgaaatgtgattaatgaatgttcatg 16043030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 24719210 - 24719250
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||| |||| | ||||||    
T  24719210 attggtgattgttcatgaaatgtgatttatgaatgttcatg 24719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 31418 - 31299
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31418 gtgattgttcatgatgtatatgatcagtgattgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 31319  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  31318 attaatgattattcatgata 31299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 5517 - 5403
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5517 gattgttcatgatgtatatgattggtgatcgtgtatgaa-aactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 5419  T
Q  105 taatgattattcatga 120  Q
    ||||||||||||||||    
T  5418 taatgattattcatga 5403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 217420 - 217459
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  217420 gtgattgttcatgaaatgtaattaatgattattcatgata 217459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 5570 - 5540
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  5570 gtgattgttcatgatgtatatgattggtgat 5540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 16416805 - 16416691
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16416805 gattgttcatgatgtatatgattggtgatcgtgtatgaa-aactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 16416707  T
Q  105 taatgattattcatga 120  Q
    ||||||||||||||||    
T  16416706 taatgattattcatga 16416691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2192595 - 2192680
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  2192595 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 2192680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 7286317 - 7286402
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  7286317 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 7286402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 15952848 - 15952931
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||    
T  15952848 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtga 15952931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16480825 - 16480910
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || |||| ||| || ||||||||||    
T  16480825 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactatgaattgatatttgttcatgacacatgtgattggtgatt 16480910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 14253060 - 14253119
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14253060 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatattt 14253119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 7291111 - 7291027
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  7291111 tgattgttcttgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 7291027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 2024869 - 2024810
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  2024869 gtgattgttcatgatgtatatgattgatgattgtgtatgaataactgtgaattgatattt 2024810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 12545544 - 12545629
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgt 90  Q
    ||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||| || |||||| | || ||||||||||||    
T  12545544 gattgttcatgatatatgggattggtgattgtgtatgaataactgtgaattgatatttgttcatgatatatgtgattggtgattgt 12545629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 12545600 - 12545684
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgtt 91  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||| || |||| ||| || |||||||||||||    
T  12545600 ttgttcatgatatatgtgattggtgattgtgtatgaataaccgtgaattgatatttgttcatgacacatgtgattggtgattgtt 12545684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 2192489 - 2192583
Alignment:
Q  25 attggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||| ||| | |||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||||||||||| ||||||    
T  2192489 attggtgattgtgaaggaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatgattaatgattgttcatg 2192583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 369346 - 369263
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgat 87  Q
    ||||| ||||||||||||||||||| | || ||||||||||||||||||||||||| || || |||| ||| || |||||||||    
T  369346 tgattattcatgatgtatatgattgataattgtgtatgaataactgtgaattgataattgttcatgacacatgtgattggtgat 369263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 32496231 - 32496274
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32496231 attggtgattgttcatgaaatgtgattaatgattattcatgata 32496274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 13867879 - 13867960
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||| ||||||||||||||||||||| || |||| ||| || ||||||||||    
T  13867879 ttgttcacgatatatgtgattggtgattgtgtataaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 13867960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 11582620 - 11582663
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  11582620 attggtgattgttcatgaaatgtgattaatgattgttcatgata 11582663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 16210190 - 16210151
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16210190 gtgattgttcatgaaatgtgattaatgattattcatgata 16210151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 369375 - 369333
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  369375 attggtgattgttcatgaaatatgattaatgattattcatgat 369333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 7286166 - 7286208
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7286166 ttggtgattgttcatgaaatgtgattaatgattgttcatgata 7286208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 44863637 - 44863563
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| |  ||||||||||    
T  44863637 tgatgtatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgcgattggtgatt 44863563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 47288170 - 47288096
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||| | ||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  47288170 tgatgtatgtaattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattggtgatt 47288096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13038894 - 13038935
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  13038894 attggtgattgttcatgaaatgtgattaatgattgttcatga 13038935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 16480717 - 16480806
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgatt 112  Q
    ||||||||||| ||| | |||||  ||||||||||||||| ||  ||||||| || |||||||||||||| |||| | ||||||||||||    
T  16480717 tgattggtgattgtgaaggaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcttgaagtatgattaatgatt 16480806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 122990 - 122947
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  122990 attggggattgttcatgaaatgtgagtaatgattattcatgata 122947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 11285603 - 11285564
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  11285603 ttggtgattgttcatgaaatgtgattaatgattgttcatg 11285564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 36051078 - 36051035
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  36051078 attggtgactgttcatgaaatgtgattaatgattattcacgata 36051035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 7291140 - 7291098
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  7291140 attggtgattgttcatgaaatgtgattaatgattgttcttgat 7291098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26071937 - 26072011
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || | || ||| || ||||||||||    
T  26071937 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcaagacacatgtgattggtgatt 26072011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26095724 - 26095798
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || | || ||| || ||||||||||    
T  26095724 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcaagacacatgtgattggtgatt 26095798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 12545491 - 12545531
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  12545491 ttggtgattgttcatgaaatgtgattaatgactgttcatga 12545531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 142062 - 142015
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatt 61  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||    
T  142062 tgatgtatgtgattggttattgtgtatgaataattgtgaattgatatt 142015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 16416858 - 16416828
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  16416858 gtgattgttcatgatgtatatgattggtgat 16416828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 18305574 - 18305619
Alignment:
Q  77 taattggtgattgttcatga--aatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||    
T  18305574 taattggtgattgttcatgataaatgtgattaatgattgttcatga 18305619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 3055204 - 3055163
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||| |||||||| |||||| |||||||||    
T  3055204 attggtgattgttcataaaatgtgactaatgactattcatga 3055163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 3893572 - 3893507
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||| |||| |||||| ||| || |||| ||| || ||||||||||    
T  3893572 tgattggtgattgtgtatgaataattgtgcattgatgtttgttcatgacacatgtgattggtgatt 3893507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 18305634 - 18305715
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||  ||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  18305634 ttgttcacgatatatgtgattgacgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 18305715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 45453934 - 45453999
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||||||||||| ||||||||||||  || || |||| ||| || ||||||||||    
T  45453934 tgattggtgattgtgtatgaatagctgtgaattgatgattgttcatgacacatgtgattggtgatt 45453999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 7286266 - 7286306
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||| |||||||||| |||||||||||| |||||||    
T  7286266 ttggtgattattcatgaaatatgattaatgattgttcatga 7286306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 13867774 - 13867814
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||  ||||| |||||||    
T  13867774 ttggtgattgttcatgaaatgtgattgctgattgttcatga 13867814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 128815 - 128696
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  128815 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgttaattgatatttgttcatgatacatgtaattggtgattgttcatgaaatgtg 128716  T
Q  103 attaatgattattcatgata 122  Q
    ||||||||||||||||||||    
T  128715 attaatgattattcatgata 128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 90674 - 90779
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgatta 113  Q
    |||||||| ||||||| ||| ||||| |||||||||||||||||||||| || |||| ||| || ||||||||||||||||||||| |||||||||||||    
T  90674 tgatgtatgtgattggagattgtgtaagaataactgtgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatatgattaatgatta 90773  T
Q  114 ttcatg 119  Q
    ||||||    
T  90774 ttcatg 90779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 90791 - 90874
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || |||| ||| || ||||||||    
T  90791 gtgattgttcatgatgtatatgattggtgattgtgtatgaatgactgtgaattgatatttgttcatgacacatgtgattggtga 90874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 96; Significance: 3e-47; HSPs: 7)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 726 - 607
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||    
T  726 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgataattgttcatgatacatgtaattggtgattgttcatgaaatgtg 627  T
Q  103 attaatgattattcatgata 122  Q
    |||||| |||||||||||||    
T  626 attaattattattcatgata 607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 5685 - 5569
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||||||||||||  || || |||||||| |||||||||||||| ||||||||||||| || |||| ||| || |||||||||||||||||||||||||    
T  5685 tgattgttcatgataaatgtggttggtgattgtgtatgaataactatgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtga 5586  T
Q  104 ttaatgattattcatga 120  Q
    ||||||||| |||||||    
T  5585 ttaatgattgttcatga 5569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 552 - 507
Alignment:
Q  77 taattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  552 taattggtgattgttcatgaaatgtgattaatgattattcatgata 507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 618 - 558
Alignment:
Q  61 ttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    ||||| |||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  618 ttattcatgatacatgtaattggtgatttttcattaaatgtgattagtgattattcatgat 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 5714 - 5671
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  5714 attggtgattgttcatgaaatgtgattaatgattgttcatgata 5671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 5556 - 5499
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||| ||| |||||| |||| |||||||||||||||| |||||||||||    
T  5556 gattgttcatgatatatgtgattgatgattgtgtatgaataactgtaaattgatattt 5499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 778 - 748
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  778 gtgattgttcatgatgtatatgattggtgat 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 109886 - 110005
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtg 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||||||||||||||||    
T  109886 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtg 109985  T
Q  103 attaatgattattcatgata 122  Q
    ||| ||||||||||| ||||    
T  109986 attgatgattattcaagata 110005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 81; Significance: 2e-38; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 21020 - 21136
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||||||||||||||||||||||||    
T  21020 tgattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtga 21119  T
Q  104 ttaatgattattcatga 120  Q
    ||||||||| |||||||    
T  21120 ttaatgattgttcatga 21136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 20991 - 21034
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  20991 attggtgattgttcatgaaatgtgattaatgattgttcatgata 21034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 21149 - 21203
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgata 59  Q
    ||||||||||||| ||| ||||||||||| ||| |||||||| ||||||||||||    
T  21149 gattgttcatgatatatgtgattggtgattgtgaatgaataattgtgaattgata 21203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 76; Significance: 2e-35; HSPs: 5)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 2820 - 2705
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| || |||| ||| || ||||||||||||||||||||||||||    
T  2820 gattgttcatgatatatgtgattggtgattgtgtatgaataactatgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtgat 2721  T
Q  105 taatgattattcatga 120  Q
    |||||||| |||||||    
T  2720 taatgattgttcatga 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 2948 - 2833
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgat 104  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||| || |||| ||| || ||||||||||||||||||||||||||    
T  2948 gattgttcatgatatatgtgattggtgattgtgtatgaataactatgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtgat 2849  T
Q  105 taatgattattcatga 120  Q
    |||||||| |||||||    
T  2848 taatgattgttcatga 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 3077 - 2961
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||||||||||||  || || |||||||| |||||||||||||| ||||||||||||| || |||| ||| || |||||||||||||||||||||||||    
T  3077 tgattgttcatgataaatgtggttggtgattgtgtatgaataactatgaattgatatttgttcatgacacatgtgattggtgattgttcatgaaatgtga 2978  T
Q  104 ttaatgattattcatga 120  Q
    ||||||||| |||||||    
T  2977 ttaatgattgttcatga 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 3106 - 3063
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  3106 attggtgattgttcatgaaatgtgattaatgattgttcatgata 3063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2692 - 2635
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||| ||| |||||| |||| |||||||||||||||| |||||||||||    
T  2692 gattgttcatgatatatgtgattgatgattgtgtatgaataactgtaaattgatattt 2635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 270609 - 270511
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||| ||| |||||||  |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  270609 tgattggtgattgtgaatgaatatttgtgaattgatatt-attcatgatacatgtaattggtgattgttcatgaaatgtgattaatgattattcatgata 270511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 236596 - 236531
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||||||||||||  ||| |||||||||| || |||| ||| || ||||||||||    
T  236596 tgattggtgattgtgtatgaataatggtgtattgatatttgttcatgacacatgtgattggtgatt 236531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 2e-29; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 156172 - 156257
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||| |||||||||||||    
T  156172 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtaattggtgatt 156257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 156045 - 156160
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    ||||| || ||||||| | ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || ||||||||||||||||||||| |||    
T  156045 tgattattgatgatgtttgtgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattggtgattgttcatgaaatatga 156144  T
Q  104 ttaatgattattcatg 119  Q
    ||||||||| ||||||    
T  156145 ttaatgattgttcatg 156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 85927 - 85970
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  85927 attggtgactgttcatgaaatgtgattaatgattattcatgata 85970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 65; Significance: 9e-29; HSPs: 3)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 7769 - 7653
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    |||||||| |||||  || || |||||||| |||||||||||||||||||||||||||| || |||| ||| || |||||||||| ||||||||||||||    
T  7769 tgattgtttatgataaatgtggttggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgattattcatgaaatgtga 7670  T
Q  104 ttaatgattattcatga 120  Q
    ||||||||| |||||||    
T  7669 ttaatgattgttcatga 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 7640 - 7557
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| |||  | ||||||||||    
T  7640 gattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatttgattggtgatt 7557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 7872 - 7755
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtga 103  Q
    |||||||||||||   || ||||||||||| |||||||||||||| ||| || ||  || || |||||| | ||  ||||||| ||||||||||||||||    
T  7872 tgattgttcatgacaaatgtgattggtgattgtgtatgaataactatga-ttaatgattgttcatgatatatgtggttggtgaatgttcatgaaatgtga 7774  T
Q  104 ttaatgattattcatgata 122  Q
    ||||||||| || ||||||    
T  7773 ttaatgattgtttatgata 7755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 62; Significance: 5e-27; HSPs: 3)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 4627 - 4712
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||| ||| |||||||||||||    
T  4627 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtaaattgatatttgttcatgacacatgtaattggtgatt 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 4424 - 4463
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4424 attggtgattgttcatgaaatgtgattaatgattattcat 4463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 4575 - 4615
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  4575 attggtgattgttcatgaaatatgattaatgattgttcatg 4615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 9919 - 10004
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||| || ||||||||||    
T  9919 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactatgaattgatatttattcatgacacatgtgattggtgatt 10004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 62; Significance: 5e-27; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49467 - 49552
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||| ||| |||||||||||||    
T  49467 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtaaattgatatttgttcatgacacatgtaattggtgatt 49552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 49264 - 49303
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49264 attggtgattgttcatgaaatgtgattaatgattattcat 49303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 49415 - 49455
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  49415 attggtgattgttcatgaaatatgattaatgattgttcatg 49455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 16972 - 16888
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgat 87  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| ||| ||||||||||||    
T  16972 gtgattgttcatgatgtatatgattggtgattgtgtgtgaataactgtgaattgatatttgttcatgacacatgtaattggtgat 16888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 61; Significance: 2e-26; HSPs: 6)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 488 - 400
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgtt 91  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||||||||||||    
T  488 gtgattgttcatgatgtatatgattggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacacgtgattggtgattgtt 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 3256 - 3175
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||||||||||| |||||||| || |||| ||| || ||||||||||    
T  3256 ttgttcacgatatatgtgattggtgattgtgtatgaataactgtgaagtgatatttgttcatgacacatgtgattggtgatt 3175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 3362 - 3322
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  3362 attggtgattgttcatgaaatgtgattaatgaatgttcatg 3322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 514 - 484
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  514 gtgattgttcatgatgtatatgattggtgat 484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 3386 - 3345
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  3386 attggtgattgttcatgaaatgtgattggtgattgttcatga 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 3433 - 3400
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgatt 112  Q
    |||||||| |||||||||||||||||||||||||    
T  3433 attggtgaatgttcatgaaatgtgattaatgatt 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 58; Significance: 1e-24; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 17727 - 17642
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||| ||| || ||||||||||    
T  17727 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgtccatgacacatgtgattggtgatt 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19757 - 19672
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||| ||| || ||||||||||    
T  19757 gtgattgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgatatttgtccatgacacatgtgattggtgatt 19672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 19865 - 19769
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||| ||| |||||||  ||||||||||||||| ||  ||||||| || |||| |||||  ||||||||| |||||||||||| ||||||    
T  19865 tgattggtgattgtgaatgaatatttgtgaattgatatttgttcctgatacatgtgattgctgattagtcatgaaatatgattaatgattcttcatg 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 17779 - 17739
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||| ||||| |||||| ||||||    
T  17779 attggtgattgttcatgaaatatgattgatgattgttcatg 17739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 2805 - 2903
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||| ||| |||||||  ||||| || ||  ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2805 tgattggtgattgtgaatgaatatttgtga-ttaatgattattcatgatacatgtaattggtgattgttcatgaaatgtgattaatgattattcatgata 2903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 29841 - 29756
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| || || | ||| || ||||||||||    
T  29841 gtgattgttcatgatgtatatgattggtgattgtgtatgaataacggtgaattgatatttgttcattacacatgtgattggtgatt 29756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 29919 - 29879
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  29919 attggtgatttttcatgaaatatgattaatgattgttcatg 29879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 21626 - 21707
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||| ||| || ||||||||||    
T  21626 ttgttcatgatgtatatgattggtgattgtgtatgaataactgtgaattgacattttttcatgacacatgtgattggtgatt 21707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 21556 - 21610
Alignment:
Q  65 ttatgatacaagtaattggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||| || ||||| ||||||||||||||| ||||||| |||| ||||||    
T  21556 ttatgatacatgtgattggcgattgttcatgaaatatgattaacgattgttcatg 21610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 2453 - 2537
Alignment:
Q  2 agtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| || |||| ||| || ||||||||    
T  2453 agtgattgttcatggtgtatatgattggtaattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtga 2537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 53; Significance: 1e-21; HSPs: 4)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 33590 - 33506
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  33590 tgattgttcatgatgtatatgattggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacatgtgattgatgatt 33506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 32863 - 32901
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32863 gtgattgttcatgaaatgtgattaatgattattcatgat 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 33643 - 33602
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  33643 attggtgattgttcatgaaatgtgattaacgattgttcatga 33602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 33613 - 33577
Alignment:
Q  85 gattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33613 gattgttcatgaaatgtgattaatgattgttcatgat 33577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 53; Significance: 1e-21; HSPs: 4)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 39254 - 39338
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  39254 tgattgttcatgatgtatatgattggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacatgtgattgatgatt 39338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 39981 - 39943
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39981 gtgattgttcatgaaatgtgattaatgattattcatgat 39943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 39201 - 39242
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  39201 attggtgattgttcatgaaatgtgattaacgattgttcatga 39242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 39231 - 39267
Alignment:
Q  85 gattgttcatgaaatgtgattaatgattattcatgat 121  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39231 gattgttcatgaaatgtgattaatgattgttcatgat 39267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 28152 - 28071
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  28152 ttgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 28071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 28206 - 28123
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgt 90  Q
    ||||| ||||| ||| || ||| |||| | ||||||||||||||||||||||| || || |||||| | || ||||||||||||    
T  28206 ttgttaatgatatatgtggttgatgattgagtatgaataactgtgaattgatacttgttcatgatatatgtgattggtgattgt 28123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 13905 - 13988
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||| || |||| ||| || ||||||||||    
T  13905 gattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgacatttgttcatgacacatgtgattggtgatt 13988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 25740 - 25673
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatga 70  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||||    
T  25740 gtgattgttcatgatgtatataattgatgattatgtatgaataactgtgaattgatatttgtttatga 25673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 25799 - 25727
Alignment:
Q  24 gattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattgttcatga 96  Q
    ||||| |||| ||| |||||||  ||||||||||||||| ||  |||||||  | ||||||||||||||||||    
T  25799 gattgatgattgtgaatgaatatttgtgaattgatatttgttcctgatacatatgattggtgattgttcatga 25727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 7184 - 7131
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgat 58  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  7184 gattgttcatgatatatgtgattggtgattgtgtatgaataactgtgaattgat 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 502 - 567
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  502 tgattggtgatggtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 407 - 448
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  407 attggtgattattcatgaaatgtgattaatgattgttcatga 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 436 - 472
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||| ||||||||||||||    
T  436 tgattgttcatgaaatgtgattgatgattattcatga 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 26650 - 26569
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| || |||| ||| || |||| |||||    
T  26650 ttgttcacgatatatgtgattggtgattgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattgatgatt 26569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 77802 - 77745
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    ||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||    
T  77802 gattgttcatgatatatgtgattggtgattgtgcatgaataactgtgaattgatattt 77745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 36202 - 36160
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  36202 ttggtgattgttcatgaaatgtgattaatgactgttcatgata 36160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 36152 - 36113
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  36152 ttggtgattgttcatgaaatgtgattgatgattgttcatg 36113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 77856 - 77826
Alignment:
Q  3 gtgattgttcatgatgtatatgattggtgat 33  Q
    |||||||||||||||||||||||||||||||    
T  77856 gtgattgttcatgatgtatatgattggtgat 77826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 6400 - 6484
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||||  || || |||||||| |||||| ||||||||||||||||||||| || |||| ||| || ||||||||||    
T  6400 tgattgttcatgataaatgtggttggtgattgtgtataaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 15035 - 14967
Alignment:
Q  20 atatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||||||||| ||||| |||||||||||||||||||||| || |||| ||| || ||||||||||    
T  15035 atatgattggtgattgtgtacgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 15926 - 16009
Alignment:
Q  5 gattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||  || || |||| ||| || ||||||||||    
T  15926 gattgttcatgatatatgtgattggtgattgtgtatgaacaactgtgaattgatgattgttcatgacacatgtgattggtgatt 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 6895 - 6938
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  6895 attggtgactgttcatgaaatgtgattaatgattattcatgata 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 145019 - 144976
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  145019 attggtgactgttcatgaaatgtgattaatgattattcatgata 144976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 147278 - 147235
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  147278 attggtgactgttcatgaaatgtgattaatgattattcatgata 147235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 125078 - 125121
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  125078 attggtgattgttcatgaaatgtgattaatgattgttcatgata 125121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 256634 - 256708
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || ||||||||||    
T  256634 tgatatatgtgattggtgattgtgtatgaataaatgtgaattgatatttgttcatgacacatgtgattggtgatt 256708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 72097 - 72138
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  72097 attggtgattattcatgaaatgtgattaatgattgttcatga 72138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 76478 - 76519
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  76478 attggtgattattcatgaaatgtgattaatgattgttcatga 76519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 192988 - 192947
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||| ||| ||||||||||||||||||||||| |||||||    
T  192988 attggttattattcatgaaatgtgattaatgattgttcatga 192947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3111 - 3053
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||||||||| ||| |||||||| || ||||||||||||| ||||||||||||||    
T  3111 tgattgttcatgatatatgtgattggtaattgtgtatgaataaccgtgaattgatattt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 3139 - 3097
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||| ||||| |||||| |||||||||    
T  3139 ttggtgattgttcatgaaatatgattgatgattgttcatgata 3097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 37954 - 37880
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||  || ||||||||||    
T  37954 tgatgtatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacttgttattggtgatt 37880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 17936 - 17855
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| |||||| ||||||||| ||||||||||| || |||| ||| || ||||||||||    
T  17936 ttgttcacgatatatgtgattggtgattgtgtattaataactgttaattgatatttgttcatgacacatgtgattggtgatt 17855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 18042 - 18002
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18042 attggtgattgttcatgaaatgtgattaatgattgttcatg 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 18065 - 18025
Alignment:
Q  80 ttggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||  ||||| |||||||    
T  18065 ttggtgattgttcatgaaatgtgattggtgattgttcatga 18025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 30851 - 30770
Alignment:
Q  7 ttgttcatgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||| ||| ||| ||||||||||| ||||||||||||||||||| |||||||| || |||| ||| || | ||||||||    
T  30851 ttgttcacgatatatgtgattggtgattgtgtatgaataactgtgaagtgatatttgttcatgacacatgtgaatggtgatt 30770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 31005 - 30964
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  31005 attggtgaatgttcatgaaatgtgattaatgattgttcatga 30964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 30957 - 30917
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    ||||||||||||||||||||||||||| |||| | ||||||    
T  30957 attggtgattgttcatgaaatgtgattgatgaatgttcatg 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 94488 - 94423
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||| | |||||||||||||||||||||||||||| || |||| ||| || ||||||||||    
T  94488 tgattggtggttgtgtatgaataactgtgaattgatatttgttcatgacacatgtgattggtgatt 94423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 94706 - 94665
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  94706 attggtgattgttcatgaaatgtgattaatgattgttcatga 94665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 94610 - 94570
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  94610 attggtgattgttcatgaaatgtgattaatgattgttcatg 94570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 94677 - 94641
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||||||||| |||||||    
T  94677 tgattgttcatgaaatgtgattaatgattgttcatga 94641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 94653 - 94617
Alignment:
Q  84 tgattgttcatgaaatgtgattaatgattattcatga 120  Q
    ||||||||||||||||||||||  |||||||||||||    
T  94653 tgattgttcatgaaatgtgattggtgattattcatga 94617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 75551 - 75616
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||| ||| || |||| ||| || ||||||||||    
T  75551 tgattggtgattgtgtatgaataactgtgaattgatgtttgttcatgacacatgtgattggtgatt 75616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 166125 - 166166
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatga 120  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  166125 attgctgattgttcatgaaatgtgattaatgattgttcatga 166166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 21054 - 21006
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatattt 62  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  21054 tgatgtatgtgattggtgtttgtgtatgaataactgtgaattgatattt 21006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 28644 - 28570
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||||||| ||||||||| | | |||||||||||||||||||||||||| || |||| ||  || ||||||||||    
T  28644 tgatgtatgtgattggtgtttgagtatgaataactgtgaattgatatttgttcatgacacttgtgattggtgatt 28570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 11705 - 11748
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  11705 attggtgattgttcatgaaaggtgattaatggttattcatgata 11748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 41196 - 41157
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  41196 gtgattgttcatgaaatgtcattaatgattattcatgata 41157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 197772 - 197811
Alignment:
Q  83 gtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  197772 gtgattgttcatgaaatgtgattaatgattatccatgata 197811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31230 - 31156
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| ||||||||||||||| || |||| ||| || |||| |||||    
T  31230 tgatatatgtgattggtgattgtgtatgaataattgtgaattgatatttgttcatgacacatgtgattgatgatt 31156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 1120 - 1192
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtga 86  Q
    |||| ||| ||||||||||| | |||||||||| ||||||||||||||| || |||| ||| || ||||||||    
T  1120 tgatatatgtgattggtgattgggtatgaataattgtgaattgatatttgttcatgacacatgtgattggtga 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 60050 - 59986
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgat 87  Q
    ||||||||||| ||||||||||||||||||||| || ||| || |||| ||| || |||||||||    
T  60050 tgattggtgattgtgtatgaataactgtgaattaatgtttgttcatgacacatgtgattggtgat 59986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 40013 - 39970
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgattattcatgata 122  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||    
T  40013 attggtgactgttcatgaactgttattaatgattattcatgata 39970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6038 - 5964
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| |||||| |||| |||||||||||| |||| |||||||||| || |||| ||| || ||||||||||    
T  6038 tgatatatgtgattgatgattgtgtatgaataattgtgtattgatatttgttcatgacacatgtgattggtgatt 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 26490 - 26564
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||||||||| |||||||||| |||| || |||| ||| || |||| |||||    
T  26490 tgatatatgtgattggtgattgtgtatgaataattgtgaattgagatttgttcatgacacatgtgattgatgatt 26564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 138480 - 138554
Alignment:
Q  14 tgatgtatatgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    |||| ||| ||||||||||| |||||| ||||| | ||||||||||||| || |||| ||| || ||||||||||    
T  138480 tgatatatgtgattggtgattgtgtataaataattttgaattgatatttgttcatgaaacatgtgattggtgatt 138554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 4530 - 4595
Alignment:
Q  23 tgattggtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgatt 88  Q
    ||||||||||| ||| |||||||| |||||||||||| || || |||||| | || ||||||||||    
T  4530 tgattggtgattgtgcatgaataaatgtgaattgatacttgttcatgatatatgtgattggtgatt 4595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 202 - 231
Alignment:
Q  4 tgattgttcatgatgtatatgattggtgat 33  Q
    ||||||||||||||||||||||||||||||    
T  202 tgattgttcatgatgtatatgattggtgat 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 23292 - 23259
Alignment:
Q  79 attggtgattgttcatgaaatgtgattaatgatt 112  Q
    ||||||||||||||||||||||||||| ||||||    
T  23292 attggtgattgttcatgaaatgtgattgatgatt 23259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 145342 - 145282
Alignment:
Q  29 gtgatcgtgtatgaataactgtgaattgatatttatttatgatacaagtaattggtgattg 89  Q
    ||||| ||||||||||||||||||||||||  || || |||| ||| || |||||||||||    
T  145342 gtgattgtgtatgaataactgtgaattgatgatttttcatgacacatgtgattggtgattg 145282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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