View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9298_low_6 (Length: 433)
Name: NF9298_low_6
Description: NF9298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9298_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 194 - 416
Target Start/End: Complemental strand, 6946223 - 6946001
Alignment:
| Q |
194 |
atttcgcagccaacatgacaaggatattgagatacaaccaagacgactcaacaatgcaattaacatacctcagaattatacttcaccaacaccaaagatc |
293 |
Q |
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| T |
6946223 |
atttcgcagccaacatgataaggatattgagatacaaccaagacgactcaacaatgcaattaacatacctcagaattatacttcaccaacaccaaagatc |
6946124 |
T |
|
| Q |
294 |
caaccaagagcctttccaaaattgtaacatctctacaactcctatcaagccagagaaaaggcaccatgaactacatcccagaagattgaccaacaatcaa |
393 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6946123 |
caaccaagagccttttcaaaattgtaacatctctacaactcctatcaagccagagaaaaggcaccatgaactacatcccagaagattgaccaacaatcaa |
6946024 |
T |
|
| Q |
394 |
ctatttcaccaaaggattaaact |
416 |
Q |
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||||||||||||||||||||||| |
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| T |
6946023 |
ctatttcaccaaaggattaaact |
6946001 |
T |
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