View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9299_low_29 (Length: 273)
Name: NF9299_low_29
Description: NF9299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9299_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 41864214 - 41863976
Alignment:
| Q |
21 |
attgttcagttaaattcacatgaacttgtgcgaaaatgaggttgttccttcgtatatatggcgtcttatgtattgtgtttgttctccatgttgtatgact |
120 |
Q |
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| T |
41864214 |
attgttcagttaaattcacatgaacttgtgcgaaaatgaggttgttccttcgtatatatggcgtcttatgtattgtgtttgttctccatgttgtatgact |
41864115 |
T |
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| Q |
121 |
catttagttgtcattccatgcactttcttatcacttacgtgcttcatagattttaattttgtttgtcatcctttaccttgaagaatgaaagtggacgttt |
220 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
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| T |
41864114 |
catttagttatcattccatgcactttcttatcacttacgtgcttcatagattttaattgtgtttgtcatcctttaccttgaagaaagaaagtggacgttt |
41864015 |
T |
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| Q |
221 |
gtgtttgcgatttcaaaatacttggatgtgtcccctttg |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
41864014 |
gtgtttgcgatttcaaaatacttggatgtgtcccctttg |
41863976 |
T |
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