View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9299_low_36 (Length: 244)
Name: NF9299_low_36
Description: NF9299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9299_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 36690975 - 36690838
Alignment:
| Q |
20 |
aaatagagaccagtatacttattaattaacctacctggtaggtgtcatgtatccaaacatatttgtaagatcctgttgtattgatccccttatcgtgccg |
119 |
Q |
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| T |
36690975 |
aaatagagaccagtatacttatcaattaacctatctggtaggtgtcatgtatccaaacatatttgtaagatcctgttgtattgatccccttatcgtgccg |
36690876 |
T |
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| Q |
120 |
aggttggtgttcctccactcaagtggaatgacaccatt |
157 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
36690875 |
aggttggtgttcctccactcaagtggaatgacaccatt |
36690838 |
T |
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