View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9299_low_43 (Length: 210)
Name: NF9299_low_43
Description: NF9299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9299_low_43 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 47590157 - 47590311
Alignment:
| Q |
38 |
cactttttactatttgaaaggtatctacctgtacattgcataatatagtaagccaggtagatatctgccaaaaagtgtcggatcccaagcatagtgttac |
137 |
Q |
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| T |
47590157 |
cactttttactatttgaaaggtatctacctgtacattgcataatatagtaagccaggtagatatctgccaaaaagtgtcggatcccaagcatagtgttac |
47590256 |
T |
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| Q |
138 |
ccaaatgtgacattattttcccagtacaaaatcacacatatggtaagagctagtt |
192 |
Q |
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| T |
47590257 |
ccaaatgtgacattattttcccagtacaaaatcacacatatggtaagagctagtt |
47590311 |
T |
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