View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9302_low_36 (Length: 241)
Name: NF9302_low_36
Description: NF9302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9302_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 16589261 - 16589465
Alignment:
| Q |
23 |
aatttgtaatcacttggcatcattaatagattataatttactatgtatatcatcacttaagatatttttacattttaacctcattaatcgatttcgacat |
122 |
Q |
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| T |
16589261 |
aatttgtaatcacttggcatcattattagattataatttaatatgtatatcatcacttaagatatttttacattttaacctcattaatcgatttcgacat |
16589360 |
T |
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| Q |
123 |
tctttaaaatcaattattcaaactcattttccaaattcacaagtttcaacctataaatggatttctaaaaacctaaaaatctatcacgcaaagttggtgt |
222 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
16589361 |
tcttaaaaatcaattattcaaactcattttccaaattcacaagtgtcaacctataaatggatttctaaaaacctaaaaatttatcacgcaaagttggtgt |
16589460 |
T |
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| Q |
223 |
aagtg |
227 |
Q |
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| T |
16589461 |
aagtg |
16589465 |
T |
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