View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9303_high_40 (Length: 224)
Name: NF9303_high_40
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_high_40 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 43920150 - 43920373
Alignment:
| Q |
1 |
tgcaatagttagagtagttggttcattggttagaaggacaacatacataataaataggaggacacatgggaagagggatatcattcagatttgtaaacaa |
100 |
Q |
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| T |
43920150 |
tgcaatagttagagtagttggttcattggttagaaggacaacatacataataaataggaggacacatgggaagagggatatcattcagatttgtaaacaa |
43920249 |
T |
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| Q |
101 |
tgagtgaatagagaaatgactcccgtagaagggaaaacccatggagaagagtcttctctcttacttccattctttcaataaaagcgtgttctttctattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43920250 |
tgagtgaatagagaaatgactcccgtagaagggaaaacccatggagaagagtcttctctcttacttccattctttcaataaaagcgtgttctttctattc |
43920349 |
T |
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| Q |
201 |
atttttcctatcaattttctaatt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
43920350 |
atttttcctatcaattttctaatt |
43920373 |
T |
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