View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9303_high_6 (Length: 440)

Name: NF9303_high_6
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9303_high_6
NF9303_high_6
[»] chr1 (62 HSPs)
chr1 (18-425)||(17055740-17056150)
chr1 (55-272)||(27917233-27917449)
chr1 (270-394)||(19009942-19010066)
chr1 (88-272)||(18891488-18891674)
chr1 (270-405)||(41032666-41032801)
chr1 (270-403)||(13276262-13276395)
chr1 (277-406)||(21846271-21846400)
chr1 (270-394)||(12513290-12513414)
chr1 (271-394)||(16125452-16125578)
chr1 (270-407)||(9327211-9327348)
chr1 (270-405)||(9955031-9955166)
chr1 (17-148)||(21846094-21846227)
chr1 (270-383)||(23528676-23528789)
chr1 (21-179)||(23528799-23528961)
chr1 (17-185)||(19009768-19009938)
chr1 (18-185)||(16125276-16125447)
chr1 (270-383)||(13100211-13100324)
chr1 (270-383)||(42180061-42180174)
chr1 (42-185)||(47785996-47786140)
chr1 (41-180)||(18304657-18304798)
chr1 (270-404)||(18304807-18304941)
chr1 (328-403)||(30619075-30619150)
chr1 (270-404)||(9352059-9352193)
chr1 (93-209)||(12002771-12002890)
chr1 (318-404)||(25146812-25146898)
chr1 (39-185)||(13276112-13276258)
chr1 (17-125)||(13100388-13100499)
chr1 (17-185)||(9351883-9352055)
chr1 (17-148)||(17869570-17869703)
chr1 (124-216)||(24117600-24117694)
chr1 (44-129)||(32881514-32881600)
chr1 (270-403)||(9128836-9128969)
chr1 (38-148)||(16434685-16434795)
chr1 (17-177)||(9954853-9955019)
chr1 (43-122)||(41032621-41032701)
chr1 (88-207)||(18337186-18337300)
chr1 (55-139)||(18228448-18228532)
chr1 (17-185)||(25146588-25146761)
chr1 (17-124)||(9128658-9128768)
chr1 (38-108)||(14074326-14074397)
chr1 (94-213)||(17197441-17197562)
chr1 (43-109)||(30619156-30619223)
chr1 (309-383)||(14074405-14074479)
chr1 (85-185)||(12513418-12513516)
chr1 (270-367)||(17869746-17869843)
chr1 (87-185)||(42179957-42180057)
chr1 (319-377)||(18337567-18337625)
chr1 (322-383)||(12800629-12800690)
chr1 (338-383)||(18228232-18228277)
chr1 (89-148)||(9327109-9327166)
chr1 (210-270)||(18337458-18337517)
chr1 (299-394)||(27917477-27917572)
chr1 (337-404)||(34478833-34478900)
chr1 (270-316)||(32881414-32881460)
chr1 (182-216)||(39845220-39845254)
chr1 (94-147)||(8773432-8773484)
chr1 (85-122)||(9327209-9327246)
chr1 (85-122)||(9955029-9955066)
chr1 (85-122)||(12513379-12513416)
chr1 (85-122)||(13100289-13100326)
chr1 (85-122)||(19009940-19009977)
chr1 (94-138)||(39845168-39845212)
[»] chr4 (56 HSPs)
chr4 (17-381)||(8010956-8011323)
chr4 (81-270)||(4156906-4157094)
chr4 (38-218)||(9149565-9149749)
chr4 (38-234)||(7044851-7045049)
chr4 (38-205)||(6346798-6346968)
chr4 (38-270)||(7452563-7452791)
chr4 (270-404)||(5361959-5362093)
chr4 (103-272)||(18459526-18459695)
chr4 (270-404)||(36120823-36120957)
chr4 (38-185)||(10143036-10143186)
chr4 (18-185)||(9911232-9911403)
chr4 (270-394)||(8889237-8889361)
chr4 (39-171)||(24719725-24719860)
chr4 (20-180)||(36120966-36121129)
chr4 (18-148)||(5375840-5375973)
chr4 (270-403)||(9770112-9770245)
chr4 (17-171)||(9770263-9770421)
chr4 (270-383)||(17466099-17466212)
chr4 (155-270)||(7803140-7803262)
chr4 (155-270)||(7825094-7825216)
chr4 (270-405)||(13551618-13551753)
chr4 (270-393)||(9911407-9911531)
chr4 (155-270)||(7815691-7815813)
chr4 (38-148)||(10394786-10394896)
chr4 (57-185)||(17466216-17466345)
chr4 (270-405)||(23064959-23065094)
chr4 (38-205)||(7045058-7045230)
chr4 (18-214)||(55476082-55476296)
chr4 (42-137)||(5361812-5361908)
chr4 (270-382)||(5375685-5375797)
chr4 (299-394)||(7044736-7044831)
chr4 (19-148)||(23064783-23064914)
chr4 (201-272)||(6346992-6347062)
chr4 (270-405)||(10142897-10143032)
chr4 (195-270)||(24719650-24719725)
chr4 (299-404)||(18459733-18459838)
chr4 (94-210)||(18403639-18403757)
chr4 (38-111)||(37240450-37240525)
chr4 (271-404)||(13023566-13023702)
chr4 (42-137)||(8889412-8889499)
chr4 (324-383)||(6347114-6347173)
chr4 (323-405)||(7452418-7452499)
chr4 (88-216)||(8743672-8743803)
chr4 (94-176)||(5884193-5884277)
chr4 (318-406)||(24719514-24719602)
chr4 (300-403)||(4156763-4156866)
chr4 (94-178)||(8409725-8409810)
chr4 (299-397)||(7815563-7815661)
chr4 (107-243)||(5943160-5943298)
chr4 (88-215)||(20812633-20812765)
chr4 (16-57)||(8367469-8367512)
chr4 (182-266)||(10394658-10394742)
chr4 (131-216)||(22060666-22060755)
chr4 (85-127)||(9911405-9911447)
chr4 (88-148)||(8367364-8367424)
chr4 (299-348)||(10394565-10394614)
[»] chr2 (55 HSPs)
chr2 (18-397)||(25538966-25539349)
chr2 (88-375)||(19491885-19492168)
chr2 (38-266)||(27406848-27407077)
chr2 (38-216)||(16766892-16767071)
chr2 (55-267)||(5395384-5395596)
chr2 (270-406)||(31237973-31238109)
chr2 (270-405)||(30432417-30432552)
chr2 (274-404)||(23863321-23863451)
chr2 (17-129)||(19262136-19262251)
chr2 (29-148)||(13502505-13502627)
chr2 (94-269)||(31023357-31023531)
chr2 (270-405)||(36429846-36429981)
chr2 (39-272)||(15627792-15628029)
chr2 (93-216)||(974429-974555)
chr2 (270-406)||(1404780-1404916)
chr2 (38-248)||(8428298-8428508)
chr2 (17-129)||(20063917-20064032)
chr2 (93-216)||(41002117-41002242)
chr2 (56-179)||(35565819-35565940)
chr2 (18-125)||(30433013-30433123)
chr2 (18-129)||(31237797-31237911)
chr2 (93-216)||(21869233-21869359)
chr2 (17-121)||(1404985-1405092)
chr2 (271-394)||(31578014-31578136)
chr2 (42-185)||(15588702-15588842)
chr2 (270-404)||(20063713-20063847)
chr2 (267-380)||(15588843-15588956)
chr2 (88-197)||(34841705-34841816)
chr2 (18-148)||(36430024-36430156)
chr2 (17-211)||(7301884-7302091)
chr2 (93-213)||(34577986-34578106)
chr2 (270-383)||(35565950-35566063)
chr2 (38-218)||(19245686-19245875)
chr2 (88-209)||(24473931-24474056)
chr2 (333-406)||(17995052-17995125)
chr2 (93-213)||(20034134-20034255)
chr2 (296-383)||(1690784-1690871)
chr2 (304-383)||(16766730-16766809)
chr2 (17-78)||(27523916-27523980)
chr2 (42-129)||(1690575-1690663)
chr2 (88-148)||(19519549-19519609)
chr2 (93-212)||(26251621-26251746)
chr2 (301-367)||(31023259-31023325)
chr2 (182-266)||(13502954-13503036)
chr2 (88-185)||(31578141-31578238)
chr2 (326-406)||(15266079-15266159)
chr2 (299-374)||(13503067-13503142)
chr2 (300-382)||(5395674-5395756)
chr2 (17-78)||(20034042-20034106)
chr2 (85-122)||(31237971-31238008)
chr2 (318-367)||(34841592-34841641)
chr2 (27-83)||(974578-974637)
chr2 (270-314)||(1690724-1690768)
chr2 (333-394)||(27406786-27406849)
chr2 (93-205)||(27524008-27524122)
[»] chr7 (73 HSPs)
chr7 (29-272)||(26565380-26565625)
chr7 (38-272)||(30294304-30294532)
chr7 (274-404)||(14055250-14055380)
chr7 (274-404)||(14365278-14365408)
chr7 (270-404)||(27221417-27221551)
chr7 (270-394)||(5058538-5058662)
chr7 (270-404)||(26281306-26281439)
chr7 (270-394)||(39182269-39182392)
chr7 (42-148)||(7730206-7730313)
chr7 (270-404)||(7730339-7730472)
chr7 (270-383)||(11326406-11326519)
chr7 (114-272)||(21157603-21157761)
chr7 (270-382)||(8343796-8343908)
chr7 (270-394)||(11324988-11325111)
chr7 (263-403)||(22687653-22687793)
chr7 (270-406)||(24725473-24725609)
chr7 (271-406)||(8330042-8330177)
chr7 (18-135)||(5715473-5715593)
chr7 (38-129)||(8329887-8329979)
chr7 (270-394)||(8346529-8346653)
chr7 (17-129)||(24989594-24989708)
chr7 (38-148)||(8346374-8346485)
chr7 (279-394)||(8571252-8571367)
chr7 (270-405)||(9685240-9685375)
chr7 (270-365)||(17811385-17811480)
chr7 (38-185)||(24725315-24725469)
chr7 (270-403)||(5715290-5715422)
chr7 (270-383)||(24990067-24990180)
chr7 (270-383)||(27509939-27510052)
chr7 (42-122)||(39182357-39182438)
chr7 (23-185)||(44944671-44944837)
chr7 (17-125)||(17811546-17811657)
chr7 (270-403)||(44944841-44944978)
chr7 (93-216)||(1981235-1981360)
chr7 (17-185)||(5058666-5058837)
chr7 (38-124)||(8329822-8329909)
chr7 (38-185)||(20570728-20570877)
chr7 (42-127)||(14055453-14055539)
chr7 (42-127)||(14365481-14365567)
chr7 (270-403)||(4247356-4247489)
chr7 (93-213)||(25842643-25842765)
chr7 (88-216)||(17809021-17809151)
chr7 (43-148)||(27509260-27509364)
chr7 (18-148)||(4247532-4247664)
chr7 (38-123)||(8343645-8343731)
chr7 (281-403)||(21846433-21846554)
chr7 (270-363)||(1977692-1977785)
chr7 (55-185)||(11325115-11325246)
chr7 (42-125)||(21846294-21846378)
chr7 (42-124)||(8346313-8346396)
chr7 (17-185)||(27221555-27221723)
chr7 (93-213)||(23618341-23618463)
chr7 (88-214)||(8629635-8629761)
chr7 (182-253)||(24915793-24915863)
chr7 (274-394)||(26617472-26617596)
chr7 (38-137)||(6916965-6917064)
chr7 (17-83)||(8304326-8304395)
chr7 (59-148)||(26617342-26617429)
chr7 (38-138)||(8572323-8572423)
chr7 (17-122)||(11326484-11326592)
chr7 (300-383)||(30294195-30294275)
chr7 (88-148)||(4574892-4574952)
chr7 (93-170)||(8254018-8254096)
chr7 (38-111)||(1977761-1977834)
chr7 (316-394)||(4574480-4574558)
chr7 (88-148)||(7307173-7307232)
chr7 (88-144)||(26340279-26340335)
chr7 (311-406)||(8629995-8630090)
chr7 (17-129)||(22687087-22687194)
chr7 (94-216)||(8304176-8304302)
chr7 (261-327)||(20570872-20570938)
chr7 (85-127)||(27221511-27221553)
chr7 (85-122)||(22687658-22687695)
[»] chr3 (61 HSPs)
chr3 (182-403)||(24649597-24649818)
chr3 (38-249)||(27676511-27676722)
chr3 (38-270)||(17796620-17796851)
chr3 (38-270)||(19105060-19105291)
chr3 (145-393)||(10872817-10873065)
chr3 (270-405)||(28745768-28745903)
chr3 (270-403)||(20756039-20756172)
chr3 (17-185)||(28745913-28746085)
chr3 (270-404)||(29067283-29067417)
chr3 (15-148)||(17064483-17064618)
chr3 (27-144)||(13286123-13286243)
chr3 (38-144)||(6136412-6136519)
chr3 (18-145)||(28135940-28136070)
chr3 (42-148)||(3449157-3449262)
chr3 (270-394)||(3449288-3449411)
chr3 (270-394)||(17064330-17064454)
chr3 (16-148)||(20756198-20756332)
chr3 (42-148)||(25870169-25870275)
chr3 (38-147)||(10872558-10872668)
chr3 (278-396)||(21963436-21963554)
chr3 (278-396)||(21985872-21985990)
chr3 (43-185)||(42696984-42697129)
chr3 (17-134)||(24620017-24620137)
chr3 (93-213)||(19348648-19348770)
chr3 (270-394)||(39427911-39428035)
chr3 (55-180)||(22137419-22137545)
chr3 (273-383)||(22494780-22494890)
chr3 (17-185)||(39428039-39428216)
chr3 (277-394)||(30727694-30727811)
chr3 (270-404)||(8156126-8156261)
chr3 (278-396)||(22137285-22137403)
chr3 (94-216)||(6861039-6861165)
chr3 (46-129)||(8155980-8156063)
chr3 (42-185)||(9152832-9152975)
chr3 (17-136)||(29067464-29067585)
chr3 (93-212)||(18014089-18014208)
chr3 (270-405)||(24620196-24620334)
chr3 (270-383)||(22356048-22356162)
chr3 (17-213)||(22970903-22971118)
chr3 (270-408)||(25870363-25870510)
chr3 (318-404)||(27676355-27676441)
chr3 (93-200)||(8592311-8592421)
chr3 (43-185)||(15515106-15515248)
chr3 (17-129)||(22355886-22355997)
chr3 (318-404)||(15806550-15806635)
chr3 (17-77)||(3041469-3041532)
chr3 (270-330)||(42696920-42696980)
chr3 (97-148)||(15806286-15806337)
chr3 (17-83)||(8592219-8592288)
chr3 (93-176)||(9169806-9169890)
chr3 (94-148)||(10591808-10591861)
chr3 (165-243)||(15806407-15806485)
chr3 (55-129)||(21963625-21963699)
chr3 (55-129)||(21986061-21986135)
chr3 (301-386)||(28135739-28135824)
chr3 (91-135)||(22494679-22494723)
chr3 (93-148)||(3041386-3041440)
chr3 (93-140)||(21553804-21553850)
chr3 (155-216)||(8566188-8566250)
chr3 (85-122)||(8156124-8156161)
chr3 (88-145)||(26208228-26208285)
[»] scaffold0603 (2 HSPs)
scaffold0603 (39-249)||(8803-9015)
scaffold0603 (324-406)||(9070-9152)
[»] chr8 (56 HSPs)
chr8 (44-270)||(15761207-15761436)
chr8 (271-383)||(3094250-3094362)
chr8 (55-244)||(8582121-8582311)
chr8 (38-218)||(17566213-17566384)
chr8 (270-404)||(5922048-5922182)
chr8 (270-407)||(15294666-15294803)
chr8 (270-407)||(15475035-15475172)
chr8 (270-383)||(22910198-22910311)
chr8 (270-406)||(11879597-11879733)
chr8 (270-406)||(11897013-11897149)
chr8 (270-394)||(31424172-31424296)
chr8 (272-383)||(45403049-45403160)
chr8 (42-135)||(29384159-29384253)
chr8 (267-364)||(6810861-6810957)
chr8 (38-129)||(17647191-17647283)
chr8 (66-185)||(23142312-23142431)
chr8 (270-383)||(19704451-19704565)
chr8 (42-148)||(6810997-6811101)
chr8 (88-214)||(26575017-26575147)
chr8 (270-394)||(29384313-29384436)
chr8 (17-148)||(45403205-45403338)
chr8 (18-185)||(11879737-11879908)
chr8 (18-185)||(11897153-11897324)
chr8 (39-147)||(24056414-24056523)
chr8 (270-379)||(27836460-27836569)
chr8 (73-210)||(1018060-1018199)
chr8 (38-185)||(5922186-5922334)
chr8 (25-185)||(7489111-7489275)
chr8 (18-148)||(15294846-15294977)
chr8 (18-148)||(15475215-15475346)
chr8 (270-383)||(17647013-17647126)
chr8 (270-355)||(23142223-23142308)
chr8 (17-135)||(19704277-19704398)
chr8 (335-404)||(477108-477177)
chr8 (88-148)||(30240264-30240324)
chr8 (55-109)||(15231835-15231889)
chr8 (324-394)||(24056618-24056688)
chr8 (43-185)||(3094092-3094235)
chr8 (298-395)||(15231732-15231829)
chr8 (55-135)||(31424355-31424435)
chr8 (19-123)||(32424534-32424641)
chr8 (87-185)||(27836357-27836456)
chr8 (93-216)||(40541732-40541858)
chr8 (93-148)||(2040282-2040336)
chr8 (26-109)||(24414116-24414202)
chr8 (55-109)||(22910064-22910118)
chr8 (85-122)||(15294768-15294805)
chr8 (85-122)||(15475137-15475174)
chr8 (88-148)||(26879749-26879810)
chr8 (324-404)||(15761489-15761569)
chr8 (93-212)||(16752119-16752240)
chr8 (17-78)||(2040364-2040428)
chr8 (17-78)||(7262007-7262071)
chr8 (312-383)||(7489325-7489393)
chr8 (270-319)||(9212251-9212300)
chr8 (17-82)||(16752264-16752332)
[»] chr6 (57 HSPs)
chr6 (17-285)||(3573720-3573982)
chr6 (38-272)||(4841672-4841906)
chr6 (270-403)||(17250057-17250190)
chr6 (270-406)||(17543736-17543872)
chr6 (270-404)||(23897810-23897944)
chr6 (270-404)||(30912408-30912542)
chr6 (270-403)||(15528106-15528239)
chr6 (278-405)||(6943464-6943591)
chr6 (17-148)||(19748509-19748642)
chr6 (42-185)||(23897948-23898092)
chr6 (17-185)||(26053116-26053288)
chr6 (17-185)||(26073169-26073341)
chr6 (20-185)||(7918173-7918340)
chr6 (270-383)||(27233273-27233386)
chr6 (17-185)||(7223649-7223824)
chr6 (17-129)||(17543550-17543665)
chr6 (270-394)||(19748342-19748466)
chr6 (17-129)||(11327382-11327497)
chr6 (88-218)||(20432500-20432633)
chr6 (17-134)||(22498260-22498380)
chr6 (270-403)||(26053292-26053425)
chr6 (270-403)||(26073345-26073478)
chr6 (270-404)||(7223518-7223645)
chr6 (271-403)||(7918378-7918510)
chr6 (17-125)||(17103393-17103504)
chr6 (29-124)||(2912093-2912191)
chr6 (93-217)||(18490538-18490664)
chr6 (63-148)||(10508886-10508971)
chr6 (38-216)||(33592994-33593189)
chr6 (17-121)||(15527930-15528037)
chr6 (88-218)||(31407397-31407531)
chr6 (271-394)||(2912245-2912367)
chr6 (270-381)||(22498881-22498992)
chr6 (270-404)||(11327567-11327701)
chr6 (93-213)||(27890480-27890603)
chr6 (93-199)||(5422564-5422665)
chr6 (102-203)||(20399994-20400099)
chr6 (17-148)||(27233119-27233252)
chr6 (270-406)||(17103199-17103328)
chr6 (274-394)||(10509023-10509143)
chr6 (318-394)||(18491081-18491157)
chr6 (326-383)||(3573984-3574041)
chr6 (182-254)||(18490783-18490854)
chr6 (37-124)||(30912248-30912336)
chr6 (88-212)||(31108252-31108377)
chr6 (324-404)||(5422798-5422878)
chr6 (270-354)||(21354789-21354873)
chr6 (318-384)||(4841963-4842027)
chr6 (341-404)||(12245108-12245171)
chr6 (318-376)||(18491005-18491063)
chr6 (18-57)||(27614477-27614518)
chr6 (182-216)||(28669420-28669454)
chr6 (88-165)||(4596761-4596843)
chr6 (85-122)||(7223610-7223647)
chr6 (88-129)||(17250250-17250291)
chr6 (188-216)||(7857097-7857125)
chr6 (85-121)||(23897910-23897946)
[»] chr5 (43 HSPs)
chr5 (38-272)||(43005702-43005940)
chr5 (29-243)||(24648095-24648306)
chr5 (270-383)||(19578962-19579075)
chr5 (270-406)||(18051526-18051662)
chr5 (270-383)||(43234888-43235001)
chr5 (17-185)||(19579079-19579252)
chr5 (270-404)||(21059152-21059285)
chr5 (278-403)||(20923718-20923843)
chr5 (17-185)||(18843852-18844024)
chr5 (270-383)||(41688661-41688773)
chr5 (270-404)||(22645715-22645849)
chr5 (17-216)||(41427510-41427728)
chr5 (270-402)||(18843716-18843848)
chr5 (42-148)||(38158111-38158216)
chr5 (17-148)||(41688486-41688618)
chr5 (38-129)||(43235062-43235154)
chr5 (38-178)||(26021464-26021605)
chr5 (277-394)||(27340189-27340306)
chr5 (270-383)||(38158250-38158363)
chr5 (18-125)||(20321141-20321251)
chr5 (39-185)||(23172272-23172420)
chr5 (55-124)||(21059018-21059087)
chr5 (38-129)||(27340030-27340122)
chr5 (17-170)||(15051917-15052081)
chr5 (116-216)||(19377704-19377808)
chr5 (39-216)||(30799497-30799682)
chr5 (93-216)||(15446302-15446429)
chr5 (318-394)||(23172476-23172552)
chr5 (88-212)||(30804032-30804158)
chr5 (66-148)||(18051405-18051486)
chr5 (17-123)||(19042248-19042356)
chr5 (91-148)||(9996880-9996937)
chr5 (270-354)||(19979648-19979732)
chr5 (93-216)||(22984713-22984839)
chr5 (333-394)||(24106650-24106711)
chr5 (225-270)||(26021408-26021453)
chr5 (167-216)||(13349509-13349558)
chr5 (87-135)||(22645614-22645662)
chr5 (80-139)||(19979790-19979848)
chr5 (85-124)||(22645713-22645752)
chr5 (122-216)||(187812-187909)
chr5 (272-358)||(20320988-20321074)
chr5 (155-216)||(29270235-29270295)
[»] scaffold0186 (2 HSPs)
scaffold0186 (270-406)||(8440-8576)
scaffold0186 (17-185)||(8580-8750)
[»] scaffold0534 (1 HSPs)
scaffold0534 (38-218)||(785-956)
[»] scaffold0042 (3 HSPs)
scaffold0042 (270-404)||(93702-93834)
scaffold0042 (39-187)||(93549-93700)
scaffold0042 (85-121)||(93700-93736)
[»] scaffold0510 (2 HSPs)
scaffold0510 (270-404)||(96-231)
scaffold0510 (42-122)||(51-131)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-148)||(56268-56379)
[»] scaffold0048 (5 HSPs)
scaffold0048 (37-148)||(48504-48616)
scaffold0048 (38-148)||(61157-61268)
scaffold0048 (182-272)||(48687-48776)
scaffold0048 (325-404)||(48839-48918)
scaffold0048 (205-272)||(61304-61370)
[»] scaffold0417 (2 HSPs)
scaffold0417 (17-148)||(7275-7408)
scaffold0417 (270-404)||(7451-7585)
[»] scaffold1178 (1 HSPs)
scaffold1178 (93-216)||(426-552)
[»] scaffold0115 (1 HSPs)
scaffold0115 (114-217)||(34909-35014)
[»] scaffold0027 (1 HSPs)
scaffold0027 (93-213)||(133027-133149)
[»] scaffold0017 (1 HSPs)
scaffold0017 (126-212)||(38475-38565)
[»] scaffold0684 (1 HSPs)
scaffold0684 (93-216)||(5124-5249)
[»] scaffold0036 (1 HSPs)
scaffold0036 (299-404)||(37191-37296)
[»] scaffold0259 (1 HSPs)
scaffold0259 (88-148)||(18559-18619)
[»] scaffold0526 (1 HSPs)
scaffold0526 (93-178)||(8288-8373)
[»] scaffold0079 (2 HSPs)
scaffold0079 (17-78)||(14746-14810)
scaffold0079 (93-140)||(14838-14884)
[»] scaffold0163 (1 HSPs)
scaffold0163 (93-148)||(2940-2994)


Alignment Details
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 18 - 425
Target Start/End: Original strand, 17055740 - 17056150
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  17055740 aaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatgga 17055839  T
Q  115 tggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatga 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17055840 tggattttaccaaaacaaaaataatgctaaatatgctataaattatatatagtcatatatgactcaatttaaagtccacaaaatacttatacataaatga 17055939  T
Q  215 ctaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttatttt 314  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  17055940 ctaacaaaaatcgacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcgcaatcaaaatcgatggattttacttatttt 17056039  T
Q  315 aaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgatgtcaatac 414  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17056040 aaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctggattttaggatttaaatcaggattttgactacaatgatgtcaatac 17056139  T
Q  415 aaaccatttat 425  Q
    || | ||||||    
T  17056140 aagcgatttat 17056150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 272
Target Start/End: Original strand, 27917233 - 27917449
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgcta 152  Q
    |||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| |||| |||||||  ||||| ||||||||| ||  ||||  ||    
T  27917233 tttactcaactacttttgtataattgatataagaaattgtattatcgcaatcaaaatcgatgaattttac--aaacataaataatgcaaaatatatatta 27917330  T
Q  153 ttaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaa 252  Q
    | ||| ||||||||||||| || ||| | |||||||| ||||||||||||||||||||||||||||  || ||| | || || || ||||||||||||||    
T  27917331 taaatcgtatatagtcataaataactcagtttaaagt-cacaaaatacttatacataaatgactaaacaaaatgtaaaacatcctccaaaaccctttaaa 27917429  T
Q  253 atcttgcgattttgtatgaa 272  Q
    ||| | | ||||||||||||    
T  27917430 atcctccaattttgtatgaa 27917449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 19009942 - 19010066
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||| | |||| ||||||||||| ||| |||||||||||||     
T  19009942 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctga 19010041  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| || |||||||    
T  19010042 attttaggatttaagtccggatttt 19010066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 88 - 272
Target Start/End: Original strand, 18891488 - 18891674
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgc--tattaattgtatatagtcatatatgacttaattta 185  Q
    |||| ||| ||||||||||||||| |||| ||||||||||||| ||||||||| |||||||    ||| |||| || ||||||||| |||| | | ||||    
T  18891488 aaatcgtagaatcgcaatcaaaattgatgaattttaccaaaacgaaaataatgttaaatatatattataaattatagatagtcataaatgattcagttta 18891587  T
Q  186 aagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    || ||||||||||||||||||||||||| |||| ||| |||||||| |  |||||||||||||||||||| ||| |||| |||||||    
T  18891588 aattccacaaaatacttatacataaatggctaaaaaaaatggacaatagacttcaaaaccctttaaaatcgtgcaatttcgtatgaa 18891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 41032666 - 41032801
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  41032666 gaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctga 41032765  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||| || ||||||| ||  |||||| || |||||||    
T  41032766 attctacgatttaagtcgagattttgacaacaatga 41032801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 13276262 - 13276395
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| || |||||||| |||||||  |||||||||||||| |  |||||||||| |||||||| |||||||||||| |    
T  13276262 gaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctag 13276361  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    ||||||||||||||||| ||||||| || |||||    
T  13276362 attttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 277 - 406
Target Start/End: Original strand, 21846271 - 21846400
Alignment:
Q  277 taaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttag 376  Q
    ||||||||||| ||||||| |||||||||   |||||| | |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  21846271 taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttag 21846370  T
Q  377 gatttaaatcaggattttaactacaatgat 406  Q
    ||||||| || ||||||| || ||||||||    
T  21846371 gatttaactcgggattttgacaacaatgat 21846400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 12513414 - 12513290
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||  ||| |||||||||| ||||||||||||| |||||||| |||||||||||| |    
T  12513414 gaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctag 12513315  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||| |||||||||| || |||||||    
T  12513314 attgtaggatttaagtcgggatttt 12513290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 16125452 - 16125578
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtg---aagaaaatcgcaaaatcct 367  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||| |  |||||||||||||   |||||| ||||||||||||    
T  16125452 aaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcct 16125551  T
Q  368 ggattttaggatttaaatcaggatttt 394  Q
    | |||||||||||||| ||||||||||    
T  16125552 gaattttaggatttaagtcaggatttt 16125578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 407
Target Start/End: Original strand, 9327211 - 9327348
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||||  ||||||   ||| |||||| ||| |||||||||||||||| ||||| |||||||| |||      
T  9327211 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaa 9327310  T
Q  370 attttaggatttaaatcaggattttaactacaatgatg 407  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  9327311 attttaggatttaagtcaggattttaacaacaatgatg 9327348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 9955031 - 9955166
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||   |||||||  ||||| | |||||||||||||||||||| ||||||||||||      
T  9955031 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaa 9955130  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    |||||||||||||| |  ||||||| || |||||||    
T  9955131 attttaggatttaagttgggattttgacaacaatga 9955166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 21846094 - 21846227
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||| |||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  21846094 caaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatag 21846193  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||| |||||||| ||| |||| |||| ||||||||    
T  21846194 atgaattttacccaaa-aaaattaatactaaatat 21846227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 23528789 - 23528676
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||  ||||||| || |||||||| |||||||  |||||||||||||| ||||||||||||| |||||||| |||||||||||||     
T  23528789 gaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 23528690  T
Q  370 attttaggatttaa 383  Q
    |||||| |||||||    
T  23528689 attttaagatttaa 23528676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 23528961 - 23528799
Alignment:
Q  21 atcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatgg 117  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  23528961 atcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgg 23528862  T
Q  118 attttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgactt 179  Q
    ||||||||  || || ||||||  |||||||  | ||| ||| ||||||||||||| |||||||    
T  23528861 attttacc-caataataataataataaatatacgttataaatggtatatagtcataaatgactt 23528799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 19009768 - 19009938
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||||  ||||||||| ||| |||| | |||||||||||||||||||||||||      
T  19009768 caaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatcgcaatcaaaatca 19009867  T
Q  114 atggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaattta 185  Q
     |||||||||||  || ||||| |||  |||||||| ||| ||| ||||||||| ||| |||||||||||||    
T  19009868 ttggattttaccccaa-aaaaaaaatattaaatatgttataaatggtatatagttataaatgacttaattta 19009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 16125276 - 16125447
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||| |||||||||||||||  ||||||||||||||||||| ||||||  || |||||||||| |||| ||||||||||||||||||||||||||| ||    
T  16125276 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcga 16125375  T
Q  115 tggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||  ||||| ||| || |||||| ||||  ||||| ||| ||| ||||||| ||||| |||||||| ||||    
T  16125376 tggacgttacccaaa-aataataatactaaatatatgttataaatggtatatattcataaatgacttagttta 16125447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 13100324 - 13100211
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| |||| |||||| |||||||  |||||||||||||| |||||||||||| ||||||||| ||| |||||||| |    
T  13100324 gaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcg 13100225  T
Q  370 attttaggatttaa 383  Q
    ||||||| ||||||    
T  13100224 attttagaatttaa 13100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 42180061 - 42180174
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||| |||| ||| ||||||| ||| ||||||| |||||| |||||||||||||||| ||| |||||||||| ||||||| |||||||||||||     
T  42180061 gaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctga 42180160  T
Q  370 attttaggatttaa 383  Q
    ||||||| ||||||    
T  42180161 attttagaatttaa 42180174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 47786140 - 47785996
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||   ||||||| ||| ||||| |||||||||||||| |  |||||||||     
T  47786140 caaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttaccaca--aaaaataata 47786043  T
Q  141 ctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  47786042 ctaaatatatgttataaatggtatatagtcataaatgacttagttta 47785996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 18304657 - 18304798
Alignment:
Q  41 tcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataat 139  Q
    ||||||||||||||||| ||| ||  ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||    
T  18304657 tcaaaatcgaaggattttactaaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaa-aaaattaat 18304755  T
Q  140 gctaaatat--gctattaattgtatatagtcatatatgactta 180  Q
     ||||||||  | ||| ||| ||||||||||||| ||||||||    
T  18304756 actaaatatacgttatgaatggtatatagtcataaatgactta 18304798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 18304807 - 18304941
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgtt-gaaggtgaagaaaatcgcaaaatcctg 368  Q
    ||||||||||| |||||| ||||||  ||||||||||  |||||| | ||||||||||| || ||||||||| ||||||||||||| ||||||||| |||    
T  18304807 gaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactg 18304905  T
Q  369 gattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||||||||||| |  ||||||| || ||||||    
T  18304906 gattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 403
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  328 ggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaat 403  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 9352059 - 9352193
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| ||||||||||| ||||||| | ||||||||  ||||||   | ||| |||| ||| |||||| ||||||||||||||| |||||||| |||||    
T  9352059 gaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctgg 9352158  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  9352159 attttaggatttaagtcgggattttgacaacaatg 9352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 12002771 - 12002890
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgactt--aatttaaag 188  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||||| |||||||  |||| ||||    
T  12002771 gtaaaatcgcaatcaaaatcaa-ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgacttaaaattcaaag 12002869  T
Q  189 tccacaaaatacttatacata 209  Q
    |||||||||||| ||||||||    
T  12002870 tccacaaaatacatatacata 12002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 25146812 - 25146898
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||||||| || |||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||||||| || ||||||    
T  25146812 attctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 13276112 - 13276258
Alignment:
Q  39 aatcaaaatcgaaggatttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataa 138  Q
    |||||||||||||||||| ||| ||  | ||||||||||| |||| ||||||||||||||| ||||||||||| |||||| | |||||||| || |||||    
T  13276112 aatcaaaatcgaaggatt-acttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactataccaaaa-aataataa 13276209  T
Q  139 tgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    | ||||  ||||| ||| |||  |||||||||||| |||||||||||||    
T  13276210 tactaaatatatgttataaatgatatatagtcataaatgacttaattta 13276258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 13100499 - 13100388
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| ||||||||||||  |||||||||| |||||||| ||||||  || |||||||||| |||| |||||||  |||||||||||||||||| |    
T  13100499 caaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggacatttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcg 13100400  T
Q  114 atggattttacc 125  Q
    ||||||||||||    
T  13100399 atggattttacc 13100388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 9351883 - 9352055
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggatttactc-aactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||| |||||||  || ||  |||||||||||||  ||| | |||||||||||||| |||||||||| |    
T  9351883 caaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggacttttgtagaatctatataggaaattgtaaaatcacaatcaaaatcg 9351982  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||| |||||||| ||| |||| |||| ||||  ||||| ||| ||| ||||||||||| | |||||||| ||||    
T  9351983 atgaattttacccaaa-aaaattaatactaaatatatgttataaatggtatatagtcaaaaatgacttagttta 9352055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 17869570 - 17869703
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||| |||||||||  |||||||||| |||||||| ||||||  |||||| ||||||  ||  || |||||||||||||||||||||||| |    
T  17869570 caaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttttatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcg 17869669  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||| |||||||||||| || |||||| ||||||||    
T  17869670 atgaattttaccaaaa-aataataatactaaatat 17869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 24117694 - 24117600
Alignment:
Q  124 ccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgact--taatttaaagtccacaaaatacttatacataaatgact 216  Q
    |||||||||||||||||||||||||| | | ||||| ||||||||||| ||||||   |||||||||| |||||||||| |||||||||||||||    
T  24117694 ccaaaacaaaaataatgctaaatatgttttaaattgcatatagtcataaatgactcaaaatttaaagttcacaaaatacatatacataaatgact 24117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 32881600 - 32881514
Alignment:
Q  44 aaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||||  |||| |||||| ||||    
T  32881600 aaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggcttttacaaaaa 32881514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 9128836 - 9128969
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||| ||||||||| ||||||| ||| ||||||  |||||||| ||||||||||  || ||||||||| || ||||||||| |||||| |||||      
T  9128836 gaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaa 9128935  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
     ||||||||||||| ||  ||||||||| |||||    
T  9128936 tttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 16434795 - 16434685
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa- 135  Q
    |||||||||||||||||||| |||| || |||||||||||||||||| |||| |    ||||||||||||||||| |||||||| ||||||||||||||     
T  16434795 caatcaaaatcgaaggattttactcgacaacttttgtagaattgatataagataac--aaaatcgcaatcaaaatcgatggattctaccaaaacaaaaat 16434698  T
Q  136 taatgctaaatat 148  Q
    ||||| |||||||    
T  16434697 taatgataaatat 16434685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 9954853 - 9955019
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||  ||  ||||||  |||||  ||| | |||||||||||||||||||||| || |    
T  9954853 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaagaatccatataggaaattgtaaaatcgcaatcaagatcg 9954952  T
Q  114 atggattttac-caaaacaaaaataatgct--aaatatgctattaattgtatatagtcatatatgac 177  Q
    ||||||||||| ||||| || |||||| ||  | ||||| ||| ||| ||||||||||||| |||||    
T  9954953 atggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaatgac 9955019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 41032621 - 41032701
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    |||||||||| |||| ||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||    
T  41032621 aaaatcgaagaattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 18337186 - 18337300
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaa-tttaa 186  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||||||||| |||      ||| ||| ||||||||||||||||| |||||| || |||||    
T  18337186 aaatagtaaaattgcaattaaaatcgatggattttaccaaaacaaaaatgatg------atgttataaattgtatatagtcataaatgactcaagtttaa 18337279  T
Q  187 agtccacaaaatacttataca 207  Q
    | ||||||||||||| |||||    
T  18337280 aatccacaaaatactcataca 18337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 18228532 - 18228448
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataat 139  Q
    ||||||||||| |||||||||||| |||| ||||||| |||||||||||||||| || |||| || |||||||||  ||||||||    
T  18228532 tttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatcaacatcgatgaatgttaccaaaaagaaaataat 18228448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 25146588 - 25146761
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaa-tcgcaatcaaaatg 112  Q
    ||||||||| | ||||||||||  ||||||||||||||||||| ||||||   |||| ||||||| |||| |  ||||| ||||| |||||||||||||     
T  25146588 caaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtctttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatc 25146687  T
Q  113 gatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||||||||| ||| |||| | || ||||||||  | ||| ||||||||||||||||| || ||||| ||||    
T  25146688 gatggattttacccaaa-aaaattgatactaaatatacgttataaattgtatatagtcataaataacttagttta 25146761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 9128658 - 9128768
Alignment:
Q  17 caaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||| ||  | |||||||| || |||| |  ||||||||||||||||||||||||      
T  9128658 caaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgcaatcaaaattt 9128757  T
Q  114 atggattttac 124  Q
    ||| |||||||    
T  9128758 atgaattttac 9128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 14074326 - 14074397
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaa 108  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||    
T  14074326 caatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 17197441 - 17197562
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagtc 190  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||  ||||| ||||||||||| |||||| || || ||||||    
T  17197441 taaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttacaaattgcatatagtcataaatgactaaagttcaaagtc 17197539  T
Q  191 cacaaaatacttatacataaatg 213  Q
    |  ||||||| ||||||||||||    
T  17197540 cgtaaaatacatatacataaatg 17197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 30619223 - 30619156
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaa 109  Q
    ||||||||||||||| ||||||||||||||||||||| ||||  | ||||||||||||||||||||||    
T  30619223 aaaatcgaaggattttactcaactacttttgtagaatcgatatgaaaaattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 14074405 - 14074479
Alignment:
Q  309 tattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||||| |||||||| ||||| ||||||||||||  |||||||| ||||||||||||  ||||||||||||||    
T  14074405 tattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaa 14074479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 12513516 - 12513418
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaattt 184  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||  ||| |||||  |||||||| |||  || |||||||||| || |||||||| |||    
T  12513516 aagaaattgtaaaatcgcaatcaaaatcgatagattttaccaaa--aaatataatattaaatatgttatatatggtatatagtcgtaaatgacttagttt 12513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 367
Target Start/End: Original strand, 17869746 - 17869843
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcct 367  Q
    ||||||||||||| |||| ||||||| | | ||||||| |||||||  |||||||| ||||| |  ||||| ||||||||||||| ||||||||||||    
T  17869746 gaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcct 17869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 42179957 - 42180057
Alignment:
Q  87 gaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgc--taaatatgctattaattgtatatagtcatatatgacttaattt 184  Q
    |||||||||||| | |||||||||| ||||||||||||||||| ||| ||||| |  || ||||| ||| ||| ||||||||||||| |||||||| |||    
T  42179957 gaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcataaatgacttagttt 42180056  T
Q  185 a 185  Q
    |    
T  42180057 a 42180057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 377
Target Start/End: Original strand, 18337567 - 18337625
Alignment:
Q  319 ttctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    |||| |||||||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  18337567 ttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg 18337625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 12800629 - 12800690
Alignment:
Q  322 tactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||| ||| |||||||||||| ||||||||| ||| ||||||||  ||||||||||||||    
T  12800629 tactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaa 12800690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 18228277 - 18228232
Alignment:
Q  338 cgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||    
T  18228277 cgttgaaggtgatgaaaatcgtaaaatcttggattttaggatttaa 18228232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 9327109 - 9327166
Alignment:
Q  89 aattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||||||||||||| |||| |||||||| ||  ||||||||| ||||||||    
T  9327109 aattgtaaaatcgcaatcaaaatcgatgaattttacccaa--aaaaataatactaaatat 9327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 18337458 - 18337517
Alignment:
Q  210 aatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||||| | ||||||||||||    
T  18337458 aatgactaaaaaa-atggacaaaattcatcaagaccctttaaaatcctacgattttgtatg 18337517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 394
Target Start/End: Original strand, 27917477 - 27917572
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    ||||||||||||| ||   ||||| ||||| || || || ||||||||| || |||||||||||||||| ||||| || |||||| || |||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggatttt 27917572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 34478833 - 34478900
Alignment:
Q  337 tcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||||||| || ||||||||   |||||| ||||||| || |||||||||| ||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 32881460 - 32881414
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaa 316  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||    
T  32881460 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaa 32881414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 39845220 - 39845254
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgact 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  39845220 tttaaagtccacaaaatacttataaataaatgact 39845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 8773484 - 8773432
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaata 147  Q
    |||||||||||| ||||| || ||||| ||||||||||||||||||| ||||||    
T  8773484 taaaatcgcaataaaaatcga-ggattctaccaaaacaaaaataatgttaaata 8773432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 9327209 - 9327246
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  9327209 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9327246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 9955029 - 9955066
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  9955029 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9955066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 12513416 - 12513379
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  12513416 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 12513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 13100326 - 13100289
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  13100326 aagaaattgtaaaatcgcaatcaaaatcgatggttttt 13100289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 19009940 - 19009977
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  19009940 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 19009977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 39845168 - 39845212
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataa 138  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||||    
T  39845168 taaaatcgcaattaaaatcgatgaattataccaaaacaaaaataa 39845212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 381
Target Start/End: Original strand, 8010956 - 8011323
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |||| |||||| |||| ||||||||||||||||||||||||||| |    
T  8010956 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 8011055  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaa 211  Q
    ||| |||||||||||||||||||||||||||  ||||| ||| ||||||||||| | ||| |||| ||| ||||||||||||||||||||||||||||||    
T  8011056 atgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagtttaaagtccacaaaatacttatacataaa 8011155  T
Q  212 tgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttat 311  Q
    ||| ||| | | || ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||| ||| |||||||| ||    
T  8011156 tgaataa-agaaat-gacaaaattcttcaaaaccctttaaaatcctgcgattttgtttgaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcat 8011253  T
Q  312 tttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggattt 381  Q
    |||   |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8011254 tttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 8011323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 81 - 270
Target Start/End: Complemental strand, 4157094 - 4156906
Alignment:
Q  81 atacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgct--aaatatgctattaattgtatatagtcatatatgact 178  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| |  | ||||| || |||||||||||||| ||| |||| |    
T  4157094 atacaagaaatcgtaaaatcgcaatcaaaatcgatggattttactaaaacaaaaataatgttgaatatatgtta-taattgtatatagtgataaatgatt 4156996  T
Q  179 taatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
       |||||||| |||||||||||||||||||||||| ||  ||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4156995 cggtttaaagttcacaaaatacttatacataaatgaata--aaaaatggacaaaatccttcaaaatcctttaaaatcttgcgattttgtatg 4156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 218
Target Start/End: Original strand, 9149565 - 9149749
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaat-cgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| |||| ||||||| ||||||  |||||||||||| ||| ||||||||||||| |||||    
T  9149565 caatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttaccaaaagaaaaa 9149664  T
Q  136 taatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaa 218  Q
    |||||||||||||  | ||| ||||||||||||| ||| |||||| |  |||||||||| |||||||||||||||||||||||||    
T  9149665 taatgctaaatatatgttataaattgtatatagttataaatgactcagcttaaagtccaaaaaatacttatacataaatgactaa 9149749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 7045049 - 7044851
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||| ||||| ||||||||||||||| | ||| |||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||    
T  7045049 caatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttaccaaaacaaaaat 7044950  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    |||| |||  || || ||| | ||||||||||| ||| |||||| | ||||||||| |||| |||||||||||||||||||||| ||| |||||||||||    
T  7044949 aatgttaaacatgtgttataatttgtatatagtgataaatgactcagtttaaagtcgacaagatacttatacataaatgactaa-aaaaatggacaaaat 7044851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 6346798 - 6346968
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6346798 caatcaaaatcgaaggattttactcaactacttttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggatttcaccaaaacaaaaat 6346897  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttata 205  Q
    |||| |||  ||||| ||| |||||||||||  |||| |||||| |  |||||||| | |||||| |||||    
T  6346898 aatgataaatatatgttataaattgtatatatgcataaatgactcaggttaaagtctagaaaatagttata 6346968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 270
Target Start/End: Complemental strand, 7452791 - 7452563
Alignment:
Q  38 caatcaaaatcgaaggatttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| | ||||| |||||| | |||  ||||| ||||||||||  |||||||||||||    
T  7452791 caatcaaaatcgaaggatttactcaactacttttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggattttgtcaaaacaaaaata 7452692  T
Q  138 atgct--aaatatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaatt 235  Q
    |||||  | ||||| ||| |||| |||||||    | |||||| | |||||| ||||||||| ||||||||| ||||||| || |||  |||||  |||     
T  7452691 atgcttaatatatgttataaattctatatag----aaatgactcagtttaaattccacaaaacacttatacaaaaatgaccaaaaaaattggac--aatc 7452598  T
Q  236 cttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
    |||||||||||||||||||| ||| ||||||||||    
T  7452597 cttcaaaaccctttaaaatcctgcaattttgtatg 7452563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 5361959 - 5362093
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| |||| |||||| ||||||  ||||||||||||||| ||||||||||||| |||||||| |||||||||||||     
T  5361959 gaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 5362058  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  5362059 attttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 18459526 - 18459695
Alignment:
Q  103 aatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatac 200  Q
    ||||||||| ||||| |||  ||||||||||| ||| |||||||||  | ||| || |||||||||||||| ||||||   |||||||||||||||||||    
T  18459526 aatcaaaatcgatggctttg-ccaaaacaaaagtaacgctaaatatatgttatgaactgtatatagtcataaatgactcggtttaaagtccacaaaatac 18459624  T
Q  201 ttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    |||||||||||||| | ||||| ||||||||||| |||||||||| ||||||||| ||| ||||||||||||    
T  18459625 ttatacataaatga-ttacaaaaatggacaaaatccttcaaaaccgtttaaaatcctgcaattttgtatgaa 18459695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 36120957 - 36120823
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||| |||| || ||||||| | |||||||||||||||||||||||||||||||||      
T  36120957 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaa 36120858  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||  ||||||||| | ||||| || ||||||    
T  36120857 attttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 10143186 - 10143036
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||||||||| | ||||||| ||||||||||| |||| |||| |||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  10143186 caatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatcaaaaaaaaaat 10143087  T
Q  137 aatgctaaatatgctat--taatt-gtatatagtcatatatgacttaattta 185  Q
    ||| ||||||||  |||  ||||| ||||||||||||| ||||||| |||||    
T  10143086 aatactaaatat-atattataattggtatatagtcataaatgacttgattta 10143036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 9911232 - 9911403
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||||||||||||||||  ||| |||| |||||||||| |||| |  ||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  9911232 aaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcga 9911331  T
Q  115 tggattttaccaaaacaaaaataatgct--aaatatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||| |||||||||| || |||||| ||  | ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  9911332 tggactttaccaaaa-aataataatacttaatatatgttataaatggtatatagtcataaatgacttagttta 9911403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 8889361 - 8889237
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||   |||||| |||| || ||||||||||| |||||||||| || |||||||||||    
T  8889361 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctgg 8889262  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| || |||||||    
T  8889261 attttaggatttaagtcgggatttt 8889237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 24719860 - 24719725
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    ||||| ||||||||||||| |||| | |||||||||||||| |||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||    
T  24719860 aatcacaatcgaaggattttactcgattacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaaagcaaaaata 24719761  T
Q  138 atgctaa--atatgctattaattgtatatagtcata 171  Q
    ||| |||  ||||| ||| |||||||||||||||||    
T  24719760 atgttaaatatatgttataaattgtatatagtcata 24719725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 36121129 - 36120966
Alignment:
Q  20 aatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatg 116  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||||  |||||||||| || |||| | ||||||||||||||||||||||||| ||||    
T  36121129 aatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatg 36121030  T
Q  117 gattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgactta 180  Q
    ||||||||||||  || |||||| ||||  ||||  ||| ||| ||||||||||||| ||||||||    
T  36121029 gattttaccaaa--aataataatactaaatatattttataaatggtatatagtcataaatgactta 36120966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 5375973 - 5375840
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||  |||| ||||||||  ||| | |||||||||||||| |||||||||| ||    
T  5375973 aaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcga 5375874  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||| ||| |||| |||| ||||||||    
T  5375873 tggattttacccaaaaaaaattaatactaaatat 5375840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 9770245 - 9770112
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||  || |||||||  |||||||  |||||||||||||| |||||||||||||||||| ||| || ||||||||| |    
T  9770245 gaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctag 9770146  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    ||||||| |||||| ||  ||||||||| |||||    
T  9770145 attttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 9770421 - 9770263
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||   |||||||||||| |||| |  |||||||||||||||||||||||| |    
T  9770421 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtcttttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcg 9770322  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcata 171  Q
    ||| |||||||| ||| |||| |||| ||||  ||||| ||| ||| |||||||||||||    
T  9770321 atgaattttacccaaa-aaaattaatactaaatatatgttatgaatggtatatagtcata 9770263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 17466212 - 17466099
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||  |||||| ||||||| |||||| || ||| |||||||||||||||||||||      
T  17466212 gaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaa 17466113  T
Q  370 attttaggatttaa 383  Q
    |||||| |||||||    
T  17466112 attttaagatttaa 17466099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 7803262 - 7803140
Alignment:
Q  155 aattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaa---ttc----ttcaaaaccct 247  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||   | ||||||||||   |||    |||||||||||    
T  7803262 aattgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataaatgactaaattaaatggacaaaatcgttcaaaattcaaaaccct 7803163  T
Q  248 ttaaaatcttgcgattttgtatg 270  Q
    |||||||||||| ||||||||||    
T  7803162 ttaaaatcttgcaattttgtatg 7803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 7825216 - 7825094
Alignment:
Q  155 aattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaa---ttc----ttcaaaaccct 247  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||   | ||||||||||   |||    |||||||||||    
T  7825216 aattgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataaatgactaaattaaatggacaaaatcgttcaaaattcaaaaccct 7825117  T
Q  248 ttaaaatcttgcgattttgtatg 270  Q
    |||||||||||| ||||||||||    
T  7825116 ttaaaatcttgcaattttgtatg 7825094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 13551618 - 13551753
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| |||||||||||  |||||| ||||||||||  |||||| |||||||| ||||||| |||||||||||||||||| ||| ||||||||||||      
T  13551618 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 13551717  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    |||||||||| ||| ||  |||||| || |||||||    
T  13551718 attttaggatataagtcgagattttgacaacaatga 13551753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 9911407 - 9911531
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| |||||||||||  ||||||  |||||||||||||| |  | ||||||||||||||||| | |||||||| ||     
T  9911407 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttga 9911506  T
Q  370 attttagga-tttaaatcaggattt 393  Q
    ||||||||| |||||||| ||||||    
T  9911507 attttaggattttaaatcgggattt 9911531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 7815813 - 7815691
Alignment:
Q  155 aattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaa---ttc----ttcaaaaccct 247  Q
    ||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||   | ||||||||||   |||    |||||||||||    
T  7815813 aattgtatatagtcataaatgactcagtttaaagtccacataatacttatacataaatgactaaattaaatggacaaaatcgttcaaaattcaaaaccct 7815714  T
Q  248 ttaaaatcttgcgattttgtatg 270  Q
    |||||||||||| ||||||||||    
T  7815713 ttaaaatcttgcaattttgtatg 7815691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 10394896 - 10394786
Alignment:
Q  38 caatcaaaatcgaagga-tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||||||||| |||||||||||||||||||||||| | || | ||||| |||||||  |||||||| | ||||||| ||||||||||||||||    
T  10394896 caatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatcaaa-tcgatggatattaccaaaacaaaaat 10394798  T
Q  137 aatgctaaatat 148  Q
    |||| |||||||    
T  10394797 aatggtaaatat 10394786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 17466345 - 17466216
Alignment:
Q  57 tactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctatt 154  Q
    ||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||| ||||||||||| ||| | |||||||||  |||  ||||| |||     
T  17466345 tactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggatttta-caacaaaaaaataatattaaatatatgttata 17466247  T
Q  155 aattgtatatagtcatatatgacttaattta 185  Q
    ||| ||||||||||||| |||||||| ||||    
T  17466246 aatggtatatagtcataaatgacttagttta 17466216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 23064959 - 23065094
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||| ||||  |||||| ||||||||  | ||||||| |||||||| |||||| |||||||||||| ||||||||| |  |||||| ||||    
T  23064959 gaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactgg 23065058  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||||||| |||||| || || ||||||| |||||||    
T  23065059 attttagaatttaagtcggggttttaacaacaatga 23065094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 205
Target Start/End: Complemental strand, 7045230 - 7045058
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattga--tacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaa 134  Q
    |||||||||||||||||||| |||||||| |||||  ||||| ||  || ||||||| |||||||  ||||||||||  |||||| ||||||||||||||    
T  7045230 caatcaaaatcgaaggattttactcaactgcttttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttaccaaaacaaaa 7045131  T
Q  135 ataatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttata 205  Q
    |||||| |||  ||||| ||| | ||||||||||| ||| |||||| | ||||||||| | || |||||||||    
T  7045130 ataatgttaaatatatgttataatttgtatatagtgataaatgactcagtttaaagtcgataagatacttata 7045058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 55476296 - 55476082
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaattgatacaa-------------gaaattgtaaaatcg 101  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||||||  ||||||||||||| |||| ||             ||| | |||||||||    
T  55476296 aaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataagatagcaaagtcggaactcgtaaaatcg 55476197  T
Q  102 caatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagtccacaaaat 198  Q
    |||||||||| || ||||| |||||||||||||||||||| ||  ||||| ||| ||||| ||||||||||| |||||| || || ||||| ||||||||    
T  55476196 caatcaaaatcga-ggattctaccaaaacaaaaataatgcaaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagtacacaaaat 55476098  T
Q  199 acttatacataaatga 214  Q
    || |||||||||||||    
T  55476097 acatatacataaatga 55476082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 5361812 - 5361908
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| | ||||| ||||||||||||||||| | ||||||||| ||||||| |||||||    
T  5361812 caaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaatcaaagtcgatggatttgaccaaaagaaaaata 5361908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 5375797 - 5375685
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| |||| || ||| ||||||  ||||||||||||||| |||| || | |||||||||||||||||||| |||||||||| |      
T  5375797 gaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaa 5375698  T
Q  370 attttaggattta 382  Q
    ||||||| |||||    
T  5375697 attttagaattta 5375685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 394
Target Start/End: Complemental strand, 7044831 - 7044736
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    ||||||||||||||||   ||||| |||||||| |||||||||||||||||| ||| | |||||||| ||||||||||||||||| || |||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggatttt 7044736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 23064783 - 23064914
Alignment:
Q  19 aaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggat 115  Q
    ||||||| ||||||||||||  ||||||||| ||||||||| | ||||  ||||||||||||| |||| | ||||||||||||| ||||||||||| ||     
T  23064783 aaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgaa 23064882  T
Q  116 ggattttaccaaaacaaaaataatgctaaatat 148  Q
     ||||||||||||| || |||||| ||||||||    
T  23064883 tgattttaccaaaa-aataataatactaaatat 23064914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 6346992 - 6347062
Alignment:
Q  201 ttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  6346992 ttatacataaatgactaaaaaa-atggacaaaatccttcaaaaccctttaaaatcctgcgattttgtgtgaa 6347062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 10143032 - 10142897
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||||||||||  ||||||  |||| |||||||||  |||||| ||||||||| ||||| |||||||||  |      
T  10143032 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaa 10142933  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||||||| |||||| || ||||||| || |||||||    
T  10142932 attttagaatttaagtcgggattttcacaacaatga 10142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 24719725 - 24719650
Alignment:
Q  195 aaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||| ||| ||| |||||||| ||||||||||||||    
T  24719725 aaatacttatacataaatgactaaaaaaaatggacacaattcttaaaagcccattaaaatcctgcgattttgtatg 24719650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 404
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaact 398  Q
    ||||||||| |||||||  ||||| |||||||| |||||||||||| ||||| | | |||||||||| ||||||||||||||| | || ||||||| ||     
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  399 acaatg 404  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 18403757 - 18403639
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgact-taatttaaagtc 190  Q
    |||||||||||||||||| || | ||| ||||||||||||||||||| |||  ||||| ||| ||||||||||||||||  ||||||  |||| ||||||    
T  18403757 taaaatcgcaatcaaaatcgaag-attctaccaaaacaaaaataatgttaaatatatgttataaattgtatatagtcatgaatgactcaaattcaaagtc 18403659  T
Q  191 cacaaaatacttatacataa 210  Q
    |||||||||  |||||||||    
T  18403658 cacaaaataaatatacataa 18403639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 37240525 - 37240450
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgata-caagaaattgtaaaatcgcaatcaaaat 111  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||| |||||||| ||||||||||    
T  37240525 caatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 13023702 - 13023566
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaa--attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctg 368  Q
    ||||||||||||||||| ||||||| || ||||||   ||||||     |||||||||||||| |||||| ||||||||||||||| ||||||||||||     
T  13023702 aaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatccta 13023603  T
Q  369 ga-ttttaggatttaaatcaggattttaactacaatg 404  Q
     | ||||||||||||| |  ||||||| || ||||||    
T  13023602 aatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 8889499 - 8889412
Alignment:
Q  42 caaaatcgaaggat-ttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    |||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||| |||| |||||||||| | |||||||    
T  8889499 caaaatcgaaggatcttactcaactacttttgtagaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaaaata 8889412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 6347114 - 6347173
Alignment:
Q  324 ctatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||||| ||||||||||||||| || ||| | ||||||||||||||||||||||||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaa 6347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 405
Target Start/End: Complemental strand, 7452499 - 7452418
Alignment:
Q  323 actatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatga 405  Q
    ||||||||| |||||||||||||||||| ||| | ||||||| ||||||||||| |||||| || ||||||| || |||||||    
T  7452499 actatggat-tgagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcacaacaatga 7452418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 8743672 - 8743803
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tt 183  Q
    |||| |||| |||||||| ||||  ||| |||||||| ||||||||||||||| |||||||  | | | ||||||  ||||||||| |||||| ||  ||    
T  8743672 aaatcgtaatatcgcaattaaaactgattgattttac-aaaacaaaaataatgttaaatatatgttttaaattgttcatagtcataaatgactcaaagtt 8743770  T
Q  184 taaagtccacaaaatacttatacataaatgact 216  Q
    ||||||| ||||||||||| |||||||||||||    
T  8743771 taaagtctacaaaatacttgtacataaatgact 8743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 5884193 - 5884277
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaa--tatgctattaattgtatatagtcatatatga 176  Q
    ||||||| |||||||||| |||||||||||| ||||||||| ||||||||||  |||| ||| ||||| |||| |||||| ||||    
T  5884193 taaaatcacaatcaaaatagatggattttacaaaaacaaaagtaatgctaaaagtatgttataaattgcatattgtcataaatga 5884277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 24719602 - 24719514
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgat 406  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||| || ||||||| | |||| ||  |||||| || ||||||||    
T  24719602 attctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatgat 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  300 gattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaacta 399  Q
    ||||||||||||||||  |||||||||  ||| ||||||||| |||||||| ||| ||  ||||||||  |||||| ||||||| || ||||||| || |    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  400 caat 403  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 8409810 - 8409725
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgact 178  Q
    |||||||| ||||||||| || ||||| |||||||||||||||||||||||  ||||| ||| ||||  ||||||||||| ||||||    
T  8409810 taaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaattacatatagtcataaatgact 8409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 7815661 - 7815563
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaac 397  Q
    ||||||||| ||||||   |||||||||||| | ||||||| | ||| |||| ||| || |||||| ||| |||||||||||||| || ||||||||||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaac 7815563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 5943160 - 5943298
Alignment:
Q  107 aaaatggatggattttaccaaaacaaaaataatgctaaat---atgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatact-- 201  Q
    ||||| ||||||||||||||||| |||||||||| |||||   ||| ||| |||  | |||||||||| |||||  | |||||||| |||||||||||      
T  5943160 aaaatcgatggattttaccaaaataaaaataatgttaaatataatgttataaat--tttatagtcataaatgacaaagtttaaagtgcacaaaatactta 5943257  T
Q  202 tatacataaatgactaacaaagatggacaaaattcttcaaaa 243  Q
    ||||||||||||| ||| ||| |  |||||||||||| ||||    
T  5943258 tatacataaatgagtaa-aaaaactgacaaaattctttaaaa 5943298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 20812765 - 20812633
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaat----atgctattaattgtatatagtcatatatgacttaa-- 181  Q
    ||||| ||||||||||||||| || || ||||| ||||||||  |||||||||||||||    ||  ||| || || ||||||||||| |||||| ||      
T  20812765 aaattttaaaatcgcaatcaagatcgaaggattctaccaaaa-gaaaataatgctaaatataaatattataaagtgcatatagtcataaatgactcaaag 20812667  T
Q  182 tttaaagtccacaaaatacttatacataaatgac 215  Q
    ||| ||||| |||||||||||||| |||||||||    
T  20812666 tttcaagtctacaaaatacttataaataaatgac 20812633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 8367512 - 8367469
Alignment:
Q  16 tcaaaatcgggactcgtaaaat--caatcaaaatcgaaggattt 57  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  8367512 tcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattt 8367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 10394742 - 10394658
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttg 266  Q
    |||||| | |||||||| ||||||||||||||| ||| |||   |||  |||| ||||||||| |||||||||| ||||||||||    
T  10394742 tttaaaattcacaaaattcttatacataaatgattaataaaagaggaagaaatccttcaaaactctttaaaatcctgcgattttg 10394658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 22060666 - 22060755
Alignment:
Q  131 aaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaatacttatacataaatgact 216  Q
    ||||||||||||||||||  |  || |||||||| |||||||| |||  | ||  ||| |||||||||||||||||||||||||||||||    
T  22060666 aaaaataatgctaaatatatgtaataaattgtatgtagtcataaatgtatcaaagtttcaagtccacaaaatacttatacataaatgact 22060755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 9911405 - 9911447
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattttaccaa 127  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||    
T  9911405 aagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaa 9911447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 8367424 - 8367364
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa-taatgctaaatat 148  Q
    |||||||||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||    
T  8367424 aaattgtaaaattgcaattaaaatcga-ggattctaccaaaacaaaaaataatgctaaatat 8367364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 10394614 - 10394565
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtg 348  Q
    |||| |||| |||||||||||||||||||| || | ||||||||||||||    
T  10394614 ggatcttgcctattttaaaattctactatgaatttaagtcgttgaaggtg 10394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 397
Target Start/End: Original strand, 25538966 - 25539349
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||||| |||||||||||  |||||||||  |||||||| ||| ||||||||||||||||| |||| || |||||||||||| ||||||||||| ||    
T  25538966 aaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcga 25539065  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaat 212  Q
    | ||||||||||||||| ||||||||||||||||  | |||  |||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||    
T  25539066 tagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcataaatgactcagtttaaagtccacaaaatacttataaataaat 25539165  T
Q  213 gactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttatt 312  Q
    |||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  25539166 gactaaaaaa-atggacaaaattctacaaaaccctttaaaatcctgcgattttgtatgaaatcgttaaatcgcagtcaaaatcgatggattttgcttatt 25539264  T
Q  313 ttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaac 397  Q
    ||   ||||| |||||||| | |||||||||||||||||||||| ||||| || || ||||||||||||||||| ||||||||||    
T  25539265 ttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttaggatttaaatcgggattttaac 25539349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 88 - 375
Target Start/End: Complemental strand, 19492168 - 19491885
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaa-aataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt 184  Q
    |||| |||||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||  | ||| ||||||||||||||||| || |||   |||    
T  19492168 aaatcgtaaaaccgtaatcaaaatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatatagtcataaataactctgttt 19492069  T
Q  185 aaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcg 284  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||     ||||||||    
T  19492068 aaagtccacagaatacttatacataaatgactaacaaa-atggataaaattcttcaaaaccctttaaaatcctgcgattttgtatga-----taaaatcg 19491975  T
Q  285 caaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggatttta 375  Q
    ||| ||||||| ||||||||| | ||||||   ||||| |||||||| ||||||||| ||| |||||||| |||||||||||| |||||||    
T  19491974 caatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagatttta 19491885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 38 - 266
Target Start/End: Complemental strand, 27407077 - 27406848
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||| ||| |||| ||||||||||||||| | |||  ||| |||||||  |||||||||||||||||| ||||||||| ||||||||||||||    
T  27407077 caatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggatttcaccaaaacaaaaat 27406978  T
Q  137 aatgctaaatatgc--tattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    ||||||||||||    ||| || |||||||||| ||| |||||| | ||||||||||||||||||| ||||||||||||||||   || | |||||||||    
T  27406977 aatgctaaatatatattataaactgtatatagtaataaatgactcagtttaaagtccacaaaatacatatacataaatgacta--caataaggacaaaat 27406880  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttg 266  Q
    ||||||||||||||||||||| ||||||||||    
T  27406879 tcttcaaaaccctttaaaatcatgcgattttg 27406848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 216
Target Start/End: Complemental strand, 16767071 - 16766892
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||| ||||||| |||||||||||||||||||  | ||| |||||||||||||||||    
T  16767071 caatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaagga-tttaccaaaacaaaaat 16766973  T
Q  137 aatgctaaata--tgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgact 216  Q
    |||||||||||  || ||| ||||||||| ||||||| |||||| | |||||||||||||||| ||||| ||||||||||||    
T  16766972 aatgctaaatatttgttataaattgtatacagtcataaatgactcagtttaaagtccacaaaaaactta-acataaatgact 16766892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 267
Target Start/End: Original strand, 5395384 - 5395596
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgct--aaatatgcta 152  Q
    ||||||||| ||||||| |||||| |||| |||||||  ||||||  |||||||||| ||  |||||||||||||||||||||||| |  ||||||| ||    
T  5395384 tttactcaattactttt-tagaatcgatataagaaatcttaaaattacaatcaaaatcgaaagattttaccaaaacaaaaataatgttcaaaatatgtta 5395482  T
Q  153 ttaattgtatatagtcatatatgacttaatttaaagtccacaaaatac-ttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaa 251  Q
    | ||||||||||||||||| |||||  |||||||||||||| |||||| |||||||||||||||||  ||| |||||||||||  || || |||||||||    
T  5395483 taaattgtatatagtcataaatgacccaatttaaagtccaccaaatactttatacataaatgacta--aaaaatggacaaaatcatttaagaccctttaa 5395580  T
Q  252 aatcttgcgattttgt 267  Q
    |||| ||| |||||||    
T  5395581 aatcctgcaattttgt 5395596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 31237973 - 31238109
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||| | |||||||| ||||||||||| || |||||||||||||||||||||| | |||||||||| |    
T  31237973 gaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctag 31238072  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| || ||||||| || ||||||||    
T  31238073 attttaggatttaagtcgggattttgacaacaatgat 31238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 30432552 - 30432417
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||| |||| ||||||| ||||||||||  |||||| | |||||||||||||| |||||||||||||| ||||||| ||| |||||||| |    
T  30432552 gaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcgaaaaatcctag 30432453  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||||||| ||||||||||||||||| || |||||||    
T  30432452 attttagaatttaaatcaggattttgacaacaatga 30432417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 404
Target Start/End: Original strand, 23863321 - 23863451
Alignment:
Q  274 tcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattt 373  Q
    |||||||||||||| ||||||| ||||||||||| |||||| | |||||||||||||| | |||||||||| ||||||||| ||||||||| || |||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  374 taggatttaaatcaggattttaactacaatg 404  Q
    ||| |||||| || ||||||| || ||||||    
T  23863421 tagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 19262136 - 19262251
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||||| ||||| ||||||  ||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  19262136 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 19262235  T
Q  114 atggattttaccaaaa 129  Q
    | ||| ||||||||||    
T  19262236 acggactttaccaaaa 19262251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 13502505 - 13502627
Alignment:
Q  29 tcgtaaaatc--aatcaaaatcgaaggat-ttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttacc 125  Q
    ||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||||  ||| ||||||| ||||||||||||||||||| |||||||||||||    
T  13502505 tcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 13502604  T
Q  126 aaaacaaaaataatgctaaatat 148  Q
    ||||||||||||||  |||||||    
T  13502605 aaaacaaaaataatattaaatat 13502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 31023531 - 31023357
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtcc 191  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| |||  ||||| ||| ||| ||| ||||||||| |  | ||| ||| ||||||    
T  31023531 taaaatcgtaatcaaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaactaattagttt-aagtcc 31023433  T
Q  192 acaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtat 269  Q
    || ||||||||||||| |||||||||  ||| || |||||||||||||||| || ||||||||| | |||||||||||    
T  31023432 accaaatacttatacaaaaatgacta--aaaaattgacaaaattcttcaaacccttttaaaatcctacgattttgtat 31023357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 36429981 - 36429846
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||| |||||||| ||||||| ||||||||||| |||||| | ||||| ||||| |  |||||||||||||||||||||| |||||||||||| |    
T  36429981 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctag 36429882  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||| |||||||||| |  ||||||| || |||||||    
T  36429881 attataggatttaagttgggattttgacaacaatga 36429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 272
Target Start/End: Complemental strand, 15628029 - 15627792
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    ||||||||||||||| ||| ||||||||||||||||||| |  | | || | || ||||||| | ||| ||||| ||||||||||| ||| | ||||| |    
T  15628029 aatcaaaatcgaaggtttttactcaactacttttgtagagtctacataatacatcgtaaaattgaaattaaaatcgatggattttatcaacaaaaaaaaa 15627930  T
Q  138 atgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgact-aacaaagatggacaaaat 234  Q
    | | |||  ||||| | | |||| ||||| ||| || |||||||| |||||||| | ||||||||||||| |||||||||| || ||| |||||||||||    
T  15627929 aggttaagtatatgttttaaattatatattgtcgtaaatgacttagtttaaagtgcgcaaaatacttatatataaatgactaaaaaaaaatggacaaaat 15627830  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
     |||  ||||||||||||||| || |||||||||||||    
T  15627829 cctttgaaaccctttaaaatcctgtgattttgtatgaa 15627792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 974555 - 974429
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||  | ||| ||||| ||||||||||| |||||||||  || ||||    
T  974555 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgacttaaagttcaaag 974457  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    |||||||||||| |||||||||||||||    
T  974456 tccacaaaatacatatacataaatgact 974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 1404916 - 1404780
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||||||||||| || ||||  ||||||| |||||| | |||||||||||||||||||| || |||||||||      
T  1404916 gaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaa 1404817  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    ||||||| |||||| || ||||||| || ||||||||    
T  1404816 attttagaatttaagtcgggattttgacaacaatgat 1404780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 38 - 248
Target Start/End: Complemental strand, 8428508 - 8428298
Alignment:
Q  38 caatcaaaatcgaaggattta-ctcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||||||||||||  |||||||| |||||||||||  |||  | |||| |||||||||||||  |||| |||| ||| |||||||||||||||    
T  8428508 caatcaaaatcgaaggattttgctcaactatttttgtagaatcaatatcaaaaatcgtaaaatcgcaatacaaatcgatgaattataccaaaacaaaaat 8428409  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    ||||||||  ||||  ||| |||| |||||||||||| || |||   |   |||||||||||||| |||||||||||||||||| |||  ||||| ||||    
T  8428408 aatgctaactatatattataaattatatatagtcataaattactcggt---aagtccacaaaatatttatacataaatgactaaaaaaagtggactaaat 8428312  T
Q  235 tcttcaaaaccctt 248  Q
      ||||||| ||||    
T  8428311 ctttcaaaatcctt 8428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 20064032 - 20063917
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||| |||||||||||||  |||||||||||||| |||| ||||||  ||||||||||||| |||| | |||||||||||||||||| |||||| |    
T  20064032 caaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcg 20063933  T
Q  114 atggattttaccaaaa 129  Q
    ||||||||||||||||    
T  20063932 atggattttaccaaaa 20063917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 41002242 - 41002117
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    ||||||||| ||||||||| || ||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||||| |||||| || || |||||    
T  41002242 gtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagt 41002144  T
Q  190 ccacaaaatacttatacataaatgact 216  Q
    ||||||||||| |||||||||||||||    
T  41002143 ccacaaaatacatatacataaatgact 41002117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 35565819 - 35565940
Alignment:
Q  56 ttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctat 153  Q
    ||||||||||||||||||||||| |||| |||||||  ||||||| |||||||||| ||||||||||||||||| |||||||   ||||  ||||| |||    
T  35565819 ttactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggattttaccaaaa-aaaaata---ctaaatatatgttat 35565914  T
Q  154 taattgtatatagtcatatatgactt 179  Q
     ||||||||||||||||| |||||||    
T  35565915 aaattgtatatagtcataaatgactt 35565940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 30433123 - 30433013
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||||||||| |||||||  ||||||||||||| ||||| ||||||  |||||| |||||| |||| | ||||||||||||||||||||||||| ||    
T  30433123 aaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggacttttatagaatcgatataggaaattgtaaaatcgcaatcaaaataga 30433024  T
Q  115 tggattttacc 125  Q
    |||||||||||    
T  30433023 tggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 31237797 - 31237911
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||||||||||||||||  |||||| |||||||||||| ||||||  ||||||||| ||| |||| |  |||||||||||| ||||||||||| ||    
T  31237797 aaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcga 31237896  T
Q  115 tggattttaccaaaa 129  Q
    |||||||||||||||    
T  31237897 tggattttaccaaaa 31237911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 21869233 - 21869359
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    |||||||| |||||||||| |||| ||| ||||||||||||||| |||||||||||  | ||| ||||| ||||||||||| || ||||||  || ||||    
T  21869233 gtaaaatcccaatcaaaatcgatg-attctaccaaaacaaaaattatgctaaatatatgttataaattgcatatagtcataaataacttaaagttcaaag 21869331  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    |||||||||||| |||||||||||||||    
T  21869332 tccacaaaatacatatacataaatgact 21869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 1405092 - 1404985
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| |||| |||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||| ||||||||||| |    
T  1405092 caaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcg 1404993  T
Q  114 atggattt 121  Q
    ||||||||    
T  1404992 atggattt 1404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 394
Target Start/End: Complemental strand, 31578136 - 31578014
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgga 370  Q
    |||||||||||| |||| ||||||  |||||||||||||||||||  ||||||||| |||| | | ||||||||||||||||||||||||||||| |  |    
T  31578136 aaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaa 31578038  T
Q  371 ttttaggatttaaatcaggatttt 394  Q
    |||||  |||||| || |||||||    
T  31578037 ttttaacatttaagtcgggatttt 31578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 15588702 - 15588842
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||||||||| |||||| |||||  |||| || |||| |||||||| |||||||||||||||||| |||||||||||||||   |||||||||     
T  15588702 caaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttaccaa---aaaaataata 15588797  T
Q  141 ctaaatatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||||   || ||| ||||||| ||||| |||||||| ||||    
T  15588798 ctaaatatatgataaatggtatataatcataaatgacttagttta 15588842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 20063847 - 20063713
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||| |||||||||||||  |||||| ||| ||||||| ||||||   |||||||||||||| | |||| |||||| ||||||||| ||||||| | |||    
T  20063847 gaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttgg 20063748  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||| ||||| || ||||||| || ||||||    
T  20063747 attttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 15588843 - 15588956
Alignment:
Q  267 tatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcc 366  Q
    |||||||||||||||||||||  |||| | || |||||||  |||||| | ||||||||||| || ||||| ||||||||||||||||  ||||||||||    
T  15588843 tatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcc 15588942  T
Q  367 tggattttaggatt 380  Q
    || |||||| ||||    
T  15588943 tgaattttaagatt 15588956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 34841816 - 34841705
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||| ||||||||||||||||||| |||||||| || | |||||||||||||  |||  ||||| ||| ||||||||||||||||| || ||| | ||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T
Q  186 aagtccacaaaa 197  Q
    ||||||||||||    
T  34841716 aagtccacaaaa 34841705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 36430156 - 36430024
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggat-ttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||| |||||||||||||||  ||||||||||||||||| ||||||||  | ||||||||||| |||| || |||   |||||| ||||||||||| ||    
T  36430156 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcga 36430057  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||| ||| ||||| ||| ||||||||    
T  36430056 tggattttacctaaa-aaaaaaaatactaaatat 36430024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 7302091 - 7301884
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaatt--------gtaaaatcgcaat 105  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||  ||||||||||||| |||  |  ||| |        | |||||||||||    
T  7302091 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatgtagcaaagtcgggactcgcaaaatcgcaat 7301992  T
Q  106 caaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt-aaagtccacaaaatactt 202  Q
    |||||| || ||||| |||||||| |||||||||| |||||||  | ||| ||||| |||| |||||| |||||| || || |||||||||||||||| |    
T  7301991 caaaatcga-ggattctaccaaaataaaaataatgttaaatatatgttataaattgcatatggtcataaatgactaaagttcaaagtccacaaaatacat 7301893  T
Q  203 atacataaa 211  Q
    || ||||||    
T  7301892 atgcataaa 7301884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 34578106 - 34577986
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt-aaagt 189  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||  | ||| ||||| |||  |||||| |||||| || || |||||    
T  34578106 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcata--gtcataaatgactaaagttcaaagt 34578010  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    ||||||||||| ||||||||||||    
T  34578009 ccacaaaatacatatacataaatg 34577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 35565950 - 35566063
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||  |||| ||||||| ||||||||||| ||||||   ||||||| |||||| |||||| |||||  |||||||| |||||||||||||     
T  35565950 gaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctga 35566049  T
Q  370 attttaggatttaa 383  Q
    |||||  |||||||    
T  35566050 attttgtgatttaa 35566063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 19245875 - 19245686
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaaga-----aattgtaaaatcgcaatcaaaatggatggattttaccaaaaca 131  Q
    ||||||||||| |||||||| ||| ||||||||||||||||| |||| | ||     || |  ||||||| ||||||| | |||||||| |||||||| |    
T  19245875 caatcaaaatctaaggattttacttaactacttttgtagaatcgatataggatagtaaaatcgaaaatcgtaatcaaa-tcgatggattctaccaaaata 19245777  T
Q  132 aaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaatacttatacataaatgactaa 218  Q
    ||||||||| |||||||  | ||  ||||| || |||||||| |||||| ||  ||||||||||||||||||||| | |||||||||||||    
T  19245776 aaaataatgttaaatatatgatagaaattgcatgtagtcataaatgactcaaagtttaaagtccacaaaatacttttgcataaatgactaa 19245686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 24474056 - 24473931
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaat--atgctattaattgtatatagtcatatatgacttaa--tt 183  Q
    ||||||||||||| |||| ||||| | |||||| ||||||||||||| ||||| |||||  ||| ||| ||||| ||||||| ||| |||||| ||  ||    
T  24474056 aaattgtaaaatcacaattaaaatcgttggattctaccaaaacaaaattaatgataaatagatgatataaattgcatatagttataaatgactaaaagtt 24473957  T
Q  184 taaagtccacaaaatacttatacata 209  Q
     ||| |||||||||||||||||||||    
T  24473956 aaaattccacaaaatacttatacata 24473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 17995125 - 17995052
Alignment:
Q  333 tgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgat 406  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||| ||||| || | |||||||| ||||||||    
T  17995125 tgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaacaatgat 17995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 20034134 - 20034255
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||| ||||| |||||| || || ||| |    
T  20034134 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatactcataaatgactaaagttcaaaat 20034232  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    ||||||||||| | ||||||||||    
T  20034233 ccacaaaatacat-tacataaatg 20034255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 383
Target Start/End: Original strand, 1690784 - 1690871
Alignment:
Q  296 aatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    ||||| |||||| ||||||   ||| ||||||||||||||||||| ||||||||||||| || |||||||||  |||||| |||||||    
T  1690784 aatgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaa 1690871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 383
Target Start/End: Complemental strand, 16766809 - 16766730
Alignment:
Q  304 ttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    ||||||||||||  ||||| |||||||| ||| |||||||||||||| ||||||| ||||||||  |||||| |||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaa 16766730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 27523916 - 27523980
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaat 78  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||||||    
T  27523916 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 1690575 - 1690663
Alignment:
Q  42 caaaatcgaagga-tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    ||||| ||||||| |||||| ||||||||||||  ||| |||| ||||| | ||||||||||||||||||| |||  ||||||||||||    
T  1690575 caaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttaccaaaa 1690663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 19519609 - 19519549
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||| ||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||||||    
T  19519609 aaatcgtaaaatcgcaatcaaaattgatagattctacaaaaaccaaaataatgctaaatat 19519549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 26251746 - 26251621
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaa-caaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa---tttaa 186  Q
    ||||||| ||||||||||| | | |||| |||||||| ||||||||||| |||||||  | ||| ||||| ||||||||||| |||||| ||   ||| |    
T  26251746 gtaaaattgcaatcaaaatcggtagattctaccaaaatcaaaaataatggtaaatatatgttataaattgcatatagtcataaatgactcaaaagtttca 26251647  T
Q  187 agtccacaaaatacttatacataaat 212  Q
    |||||||||||||| |||| ||||||    
T  26251646 agtccacaaaatacctataaataaat 26251621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 31023325 - 31023259
Alignment:
Q  301 attttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcct 367  Q
    ||||||| |||||||  ||||||||||| || |||||||||||| ||||| ||| ||||||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 13502954 - 13503036
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttg 266  Q
    |||||| |||||||||||||||||||||||||||  | ||| ||| || |||| || ||||||| ||||||||| || |||||||    
T  13502954 tttaaactccacaaaatacttatacataaatgac--aaaaaaatgaactaaatcctccaaaaccttttaaaatcctgtgattttg 13503036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 31578238 - 31578141
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||||||||| | ||| ||||||||||| | ||  ||||||||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  31578238 aaattgtaaaatcgcaattataatcgatggattttaaccaa--aaaaataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 31578141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 15266159 - 15266079
Alignment:
Q  326 atggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||| ||| || |||||| |||| ||| |  |||||||||| |||||||||||||||||| |||||| || ||||||||    
T  15266159 atggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgacaacaatgat 15266079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 13503067 - 13503142
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggatttt 374  Q
    ||||||||| ||||||| |||| |  ||||||| |||| ||||||| ||||| || ||||||||||||| ||||||    
T  13503067 ggattttgcctattttagaattttgttatggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttt 13503142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 382
Target Start/End: Original strand, 5395674 - 5395756
Alignment:
Q  300 gattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggattta 382  Q
    |||||||| |||||| | ||||| |||||||| |||||| || ||| |||| ||| ||||||||||||  |||||| ||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgattta 5395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 20034042 - 20034106
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaat 78  Q
    |||||||| ||||||||||||  |||||||||| |||||| |||||||||  |||||||||||||    
T  20034042 caaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtagaat 20034106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 31237971 - 31238008
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  31237971 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 31238008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 34841641 - 34841592
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcct 367  Q
    ||||| |||||||| |||||||||||||||||| ||| ||||| ||||||    
T  34841641 attctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcct 34841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 974637 - 974578
Alignment:
Q  27 actcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaattgata 83  Q
    ||||||||||||  |||||||||||||||| |||||||||  ||||||||||||| ||||    
T  974637 actcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgata 974578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 1690724 - 1690768
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttatttt 314  Q
    |||||||||||||||||| |||||||||||| ||| || ||||||    
T  1690724 gaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctatttt 1690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 27406849 - 27406786
Alignment:
Q  333 tgagtcgttgaaggtgaagaaaatcgcaaaatcct--ggattttaggatttaaatcaggatttt 394  Q
    ||||||||||||||| || ||||||||||||||||   |||||||| |||||| || |||||||    
T  27406849 tgagtcgttgaaggtaaaaaaaatcgcaaaatcctagagattttagaatttaattcgggatttt 27406786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 27524008 - 27524122
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgc--tattaattgtatatagtcatatatgacttaattt-aaagt 189  Q
    ||||||| ||||||||||| || || || ||||||||||||||||||| |||||||    ||| ||||| ||||| ||||| |||| | || || |||||    
T  27524008 gtaaaattgcaatcaaaatcgaggg-ttctaccaaaacaaaaataatgttaaatatatattataaattgcatatattcataaatgattaaagttcaaagt 27524106  T
Q  190 ccacaaaatacttata 205  Q
    ||||||||||| ||||    
T  27524107 ccacaaaatacatata 27524122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 3e-64; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 29 - 272
Target Start/End: Original strand, 26565380 - 26565625
Alignment:
Q  29 tcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttacc 125  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||  ||| || |||| ||||||| ||||||||||| |||||||||||||    
T  26565380 tcgtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttacc 26565479  T
Q  126 aaaacaaaaataatgctaa-atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaaga 224  Q
    ||||||||||||||| ||| ||||| ||| || |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||     
T  26565480 aaaacaaaaataatgttaatatatgttataaactgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataaatgactaa-aaag- 26565577  T
Q  225 tggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    | |||||||| |||| ||||||||||||||| |  |||||||||||||    
T  26565578 tagacaaaatacttccaaaccctttaaaatcctaggattttgtatgaa 26565625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 38 - 272
Target Start/End: Complemental strand, 30294532 - 30294304
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||||||||| ||| |||||||||| |||||| |||| |||||||  ||||||| |||||||| | ||||||||||||||||||||| ||    
T  30294532 caatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttaccaaaacaaagat 30294433  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    |||| |||  ||||| ||| ||||||        ||| |||||  | | |||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  30294432 aatgttaaatatatgttataaattgt--------ataaatgacccagtataaagtccacaaaatagttatacataaatgactaa-aaaaatggacaaaat 30294342  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
      ||||||||||||||||||  |  |||||||||||||    
T  30294341 ctttcaaaaccctttaaaattctatgattttgtatgaa 30294304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 14055380 - 14055250
Alignment:
Q  274 tcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattt 373  Q
    |||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||    
T  14055380 tcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattt 14055281  T
Q  374 taggatttaaatcaggattttaactacaatg 404  Q
    |||||| ||| |  ||||||| || ||||||    
T  14055280 taggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 404
Target Start/End: Complemental strand, 14365408 - 14365278
Alignment:
Q  274 tcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattt 373  Q
    |||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||    
T  14365408 tcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattt 14365309  T
Q  374 taggatttaaatcaggattttaactacaatg 404  Q
    |||||| ||| |  ||||||| || ||||||    
T  14365308 taggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 27221551 - 27221417
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| |||||||||||  ||||||| ||||||||||| || ||||||||||||| |||||||| |||||||||||||     
T  27221551 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 27221452  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||| |||||| |  |||||||||| ||||||    
T  27221451 attttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 5058662 - 5058538
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| |||||||   ||||||||| |||||||| |||||||||||||| |  ||||||||||||||||||||||||||||| |||     
T  5058662 gaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctga 5058563  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| || |||||||    
T  5058562 attttaggatttaagtcgggatttt 5058538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 26281306 - 26281439
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||| |||||||||||||     
T  26281306 gaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 26281404  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||| ||||||| || | ||||| || ||||||    
T  26281405 attttatgatttaagtcggaattttgacaacaatg 26281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 39182392 - 39182269
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| ||||||||||| ||||||   |||||||||||||| | ||||||||||||||||| || |||||||||||| |    
T  39182392 gaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctag 39182294  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| ||||||||||    
T  39182293 attttaggatttaagtcaggatttt 39182269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 7730206 - 7730313
Alignment:
Q  42 caaaatcgaa-ggatttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||     
T  7730206 caaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttaccaacaaaaaaaaaata 7730305  T
Q  141 ctaaatat 148  Q
    ||||||||    
T  7730306 ctaaatat 7730313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 7730339 - 7730472
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||||||||| | ||||||  ||||||||| ||||| ||||| ||| |||||||||||| |||||||| |||||    
T  7730339 gaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctgg 7730437  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| |||||||||| || ||||||    
T  7730438 attttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 11326519 - 11326406
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| || |||||||| |||||||| |||||||||||||| | ||||| |||||||||||||| ||||||||||||      
T  11326519 gaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaa 11326420  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  11326419 attttaggatttaa 11326406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 114 - 272
Target Start/End: Original strand, 21157603 - 21157761
Alignment:
Q  114 atggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaa 211  Q
    ||||||| ||||||||||||| |||||||||||||  | ||| ||| ||||||| || || ||||||   ||||||||| ||||||||||||||||||||    
T  21157603 atggattctaccaaaacaaaagtaatgctaaatatatgttataaatggtatataatcgtaaatgactcg-tttaaagtctacaaaatacttatacataaa 21157701  T
Q  212 tgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    ||||| | |||  ||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  21157702 tgactcaaaaac-tggacaaaattcttcaaaatcctttaaaattctgcgattttgtatgaa 21157761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 8343796 - 8343908
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||||||  |||||  ||||||||| | ||||||   |||||||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  8343796 gaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccagg 8343895  T
Q  370 attttaggattta 382  Q
    |||||||||||||    
T  8343896 attttaggattta 8343908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 11325111 - 11324988
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||| |||||| |||||| | || ||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||     
T  11325111 gaaatcgtaaattcgcaatcaaaatta-tgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatga 11325013  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| || |||||||    
T  11325012 attttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 403
Target Start/End: Original strand, 22687653 - 22687793
Alignment:
Q  263 tttgtatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaa 362  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||| ||||||   ||||| | |||||| ||||| ||||||| |||||||| |||||||    
T  22687653 tttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaa 22687752  T
Q  363 atcctggattttaggatttaaatcaggattttaactacaat 403  Q
     ||||| |||||||||||||| || ||||||| || |||||    
T  22687753 ttcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 24725473 - 24725609
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||| |||||| || ||||||  ||||||||||| ||||||   |||||||||||||| ||||| |||||||||||||||| ||| |||||| |||    
T  24725473 gaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttgg 24725572  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| || ||||||| || ||||||||    
T  24725573 attttaggatttaagtctggattttgacaacaatgat 24725609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 271 - 406
Target Start/End: Original strand, 8330042 - 8330177
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgga 370  Q
    |||||||||||||||||  |||||||||| ||||| | ||||||   |||||||||||||| ||| |||||||||||||||||| |||||||||| || |    
T  8330042 aaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaa 8330141  T
Q  371 ttttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||| |||||  |||||||||| || ||||||||    
T  8330142 ttttagaatttaggtcaggattttgacaacaatgat 8330177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 5715593 - 5715473
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||||||||||||||||  |||||||||||| |||||| ||||||  ||||||||||||| |||| | |||||| |||||||||||||||||| ||    
T  5715593 aaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcga 5715494  T
Q  115 tggattttaccaaaacaaaaa 135  Q
    || |||||||||||| |||||    
T  5715493 tgaattttaccaaaaaaaaaa 5715473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 8329887 - 8329979
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||||||||||    
T  8329887 caatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttaccaaaa 8329979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 8346529 - 8346653
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||   |||||||||||||| |||||||||||||||||||||| ||||||||||||      
T  8346529 gaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 8346628  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||||||  |||||  ||||||||||    
T  8346629 attttaatatttaggtcaggatttt 8346653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 24989594 - 24989708
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||| |||| | |||||| |||||||||||||||||| |    
T  24989594 caaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcg 24989692  T
Q  114 atggattttaccaaaa 129  Q
    ||||||||||||||||    
T  24989693 atggattttaccaaaa 24989708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 8346374 - 8346485
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||  ||||||| |||||| |||  |||||||||||||||| || |||    
T  8346374 caatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttaccaaaaaaataat 8346473  T
Q  137 aatgctaaatat 148  Q
    ||| ||||||||    
T  8346474 aatactaaatat 8346485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 8571367 - 8571252
Alignment:
Q  279 aaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagga 378  Q
    ||||||||| ||||||| |||| ||||   |||||||  |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  379 tttaaatcaggatttt 394  Q
    ||||| || |||||||    
T  8571267 tttaagtcgggatttt 8571252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 9685240 - 9685375
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| |||||||||||  |||||| ||||||||||  |||||| |||||||| ||||||| |||||||||||||||||| ||| ||||||||||||      
T  9685240 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 9685339  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    |||||||||| ||| ||  |||||| || |||||||    
T  9685340 attttaggatataagtcgagattttgacaacaatga 9685375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 365
Target Start/End: Complemental strand, 17811480 - 17811385
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatc 365  Q
    |||||||||||||||||| ||||||| || |||||||  ||||||||||||||||||||||| |||||||||||||||||| ||| || |||||||    
T  17811480 gaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 24725315 - 24725469
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttacc----aaaacaa 132  Q
    ||||||||||| |||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||    ||||  |    
T  24725315 caatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaata 24725414  T
Q  133 aaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  24725415 aaataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 24725469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 5715422 - 5715290
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||||||  |||||||||||| || | ||| |||||||||| | ||| |||||||||||||     
T  5715422 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctga 5715324  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    |||||||||||||| || ||||||| || |||||    
T  5715323 attttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 24990067 - 24990180
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||| |||| ||||||| ||||||||||| |||||||  |||||||||||||| |||||||||| |||| |||||| || |||||||||      
T  24990067 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaa 24990166  T
Q  370 attttaggatttaa 383  Q
    ||||| ||||||||    
T  24990167 atttttggatttaa 24990180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 27509939 - 27510052
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||  ||| ||||||| |||||| |||||||||||| ||| ||| |||||| | ||||||||||||||||||||||      
T  27509939 gaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatccttt 27510038  T
Q  370 attttaggatttaa 383  Q
    ||||||| ||||||    
T  27510039 attttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 39182438 - 39182357
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||| ||||||||||    
T  39182438 caaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 44944671 - 44944837
Alignment:
Q  23 cgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggat 119  Q
    ||||||||||||||||  ||| |||||||||  |||| ||| ||  ||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||     
T  44944671 cgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagac 44944770  T
Q  120 tttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  44944771 tttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 44944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 17811657 - 17811546
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||| ||||||  ||||||||||||| |||| |  |||||||||||||||||||||||| |    
T  17811657 caaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcg 17811558  T
Q  114 atggattttacc 125  Q
    ||||||||||||    
T  17811557 atggattttacc 17811546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 44944841 - 44944978
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaag----gtgaagaaaatcgcaaaatc 365  Q
    ||||| |||||||| ||| ||||||| ||||||||||  |||||||  |||||||||||||| ||| |||||||||    ||||||||| ||||||||||    
T  44944841 gaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatc 44944940  T
Q  366 ctggattttaggatttaaatcaggattttaactacaat 403  Q
    ||| |||||||||||||| || ||||||| || |||||    
T  44944941 ctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 1981235 - 1981360
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt-aaagt 189  Q
    ||||||| ||||||||||| || ||||| || ||||||||||||||||||||||||  | ||| ||||| ||||||||||| |||||| || || |||||    
T  1981235 gtaaaattgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagt 1981333  T
Q  190 ccacaaaatacttatacataaatgact 216  Q
    ||||||||||| |||||||||||||||    
T  1981334 ccacaaaatacatatacataaatgact 1981360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 5058837 - 5058666
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| | |||||||||  |||||||||||||||||||| | ||||  | |||||| |||| |||| || |||||||||||||||||||||||| |    
T  5058837 caaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaattttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcg 5058739  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||| |||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  5058738 atggactttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 5058666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 8329822 - 8329909
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||  | |||||||||    
T  8329822 caatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 20570728 - 20570877
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||| ||| ||||| ||||||  ||||||||||||| |||| |||||||| ||||||| |||||||||| |||||| |||||||||| || |||    
T  20570728 caatcaaaattgaaagattttactcaaggacttttgtagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaaa-aagaat 20570826  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  20570827 aatactaaatatatgttataaatggtatatagtcataaatgacttatttta 20570877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 14055539 - 14055453
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaa 127  Q
    |||||||||||||||| ||||||||||||||||||||  |||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  14055539 caaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14055453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 14365567 - 14365481
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaa 127  Q
    |||||||||||||||| ||||||||||||||||||||  |||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  14365567 caaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaa 14365481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 4247489 - 4247356
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| ||||||||||| ||||||| ||| ||||||| ||||||   |||||||||||||| | ||| |||||| ||||||||| |  ||||||||||     
T  4247489 gaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctga 4247390  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    ||||||||||||||||  ||||||| || |||||    
T  4247389 attttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25842643 - 25842765
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||| |||||| || || |||||    
T  25842643 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagt 25842741  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    ||||||||||| || |||||||||    
T  25842742 ccacaaaatacatacacataaatg 25842765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 17809021 - 17809151
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||| |||||||||||||||||||  || |||| |||||||||||||||||||||||  ||||| ||| ||||| ||||| ||||| |||||| | |||     
T  17809021 aaatcgtaaaatcgcaatcaaaattcatagattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataatcataaatgactcagtttt 17809120  T
Q  186 aagtccacaaaatacttatacataaatgact 216  Q
    || ||   |||||||||||||||||||||||    
T  17809121 aaatctgaaaaatacttatacataaatgact 17809151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 148
Target Start/End: Original strand, 27509260 - 27509364
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgc 141  Q
    ||||| ||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||||| ||| | ||| ||||||||||||  ||||||||| |    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgattttaccaaa--aaaaataatac 27509357  T
Q  142 taaatat 148  Q
    |||||||    
T  27509358 taaatat 27509364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 4247664 - 4247532
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||| |||| ||||||||||  ||||||| || |||||||| ||||||  | ||||||||||| |||| |||||||  |||||||||||||||||| ||    
T  4247664 aaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcga 4247565  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||| ||| ||||||||| ||||||||    
T  4247564 tggattttacctaaa-aaaaataatactaaatat 4247532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 8343645 - 8343731
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggatttta 123  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| || |||| ||||||||||||||||| |  ||||||||||    
T  8343645 caatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta 8343731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 281 - 403
Target Start/End: Original strand, 21846433 - 21846554
Alignment:
Q  281 atcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatt 380  Q
    ||||||| ||||||| || |||||| | | ||||| ||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| ||||||| |||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  381 taaatcaggattttaactacaat 403  Q
    ||| || ||||||| || |||||    
T  21846532 taagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 363
Target Start/End: Complemental strand, 1977785 - 1977692
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaa 363  Q
    |||||| ||||||||||| ||||||| | | ||||||| |||||||  |||||||||||||| |||||||||||||||| | ||||||||||||    
T  1977785 gaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 185
Target Start/End: Complemental strand, 11325246 - 11325115
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgctat- 153  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||  |||||||||| ||||||||||||||||| ||||| ||  ||||||||| |||     
T  11325246 tttactcaactacttctgtaaaattgatata-gaaattgtaaaattacaatcaaaatcgatggattttaccaaaaaaaaaaaaa--ctaaatatgttata 11325150  T
Q  154 --taatt-gtatatagtcatatatgacttaattta 185  Q
      ||||| ||||||||||||| |||||||| ||||    
T  11325149 aataattggtatatagtcataaatgacttagttta 11325115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 21846294 - 21846378
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttacc 125  Q
    |||||||||||||||| | |||||||||||| |||||| |||| ||||||| |||||||| |||||||||| |||||||||||||    
T  21846294 caaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacc 21846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 8346313 - 8346396
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||  | |||||||||    
T  8346313 caaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 27221723 - 27221555
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||||    ||||||||||||| |||  | ||||||||||||||||||| ||||| |    
T  27221723 caaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaattgtaaaatcgcaattaaaatcg 27221624  T
Q  114 atggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |  |||| |||||||| |||||  |   || ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  27221623 actgattgtaccaaaaaaaaaacta---tatatatgttataaatggtatatagtcataaatgacttagttta 27221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 23618341 - 23618463
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    ||||||||| ||||||||| || ||||| ||||||||||||||||||| |||  ||||  ||| ||||| ||||||||||| |||||| || || |||||    
T  23618341 gtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatattataaattgcatatagtcataaatgactaaagttcaaagt 23618439  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    | ||||||||| ||||||||||||    
T  23618440 ctacaaaatacatatacataaatg 23618463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 8629635 - 8629761
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgactt-aattt 184  Q
    |||| ||||||||||||||||||  || ||||| |||||||||||||||||||||||  ||||| ||| |||||   ||||||||| ||  ||| ||||     
T  8629635 aaatcgtaaaatcgcaatcaaaaccga-ggattctaccaaaacaaaaataatgctaaatatatgttataaattg--catagtcataaatatcttaaattc 8629731  T
Q  185 aaagtccacaaaatacttatacataaatga 214  Q
    |||||||||||||||| |||||||||||||    
T  8629732 aaagtccacaaaatacatatacataaatga 8629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 24915793 - 24915863
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaa 253  Q
    ||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||||| |||| ||||||||    
T  24915793 tttaaagtccacaaaatacttatacgtaaatgattaa-aaaaatggacaaaattcttcgaaactctttaaaa 24915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 26617472 - 26617596
Alignment:
Q  274 tcgtaaaatcgcaaacaaaatcaatggattttgcttat--tttaaaattctactat--ggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||||||| || |||||||| |||  |||| |||||||||||  | || |  ||||||||||||||| ||| |||||||||||||     
T  26617472 tcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctga 26617571  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||||||||||| || |||| |||||    
T  26617572 attttaggattaaagtcagaatttt 26617596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 6917064 - 6916965
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||| ||||||||| |||||||||||||  || ||| |||| |||||||| |||||| ||||||||||| |||| |||||||||| | ||||||    
T  6917064 caatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttaccaacaaaaaaat 6916966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 8304395 - 8304326
Alignment:
Q  17 caaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgata 83  Q
    |||||||| ||||||||||||||  |||||||||||||||||| ||||||  ||||||||||||||||||    
T  8304395 caaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttgtagaattgata 8304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 26617342 - 26617429
Alignment:
Q  59 ctcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||| || ||||||||||  |||| || |||||||||||||||||||||||| ||| ||||||||  ||| ||||||||| ||||||||    
T  26617342 ctcaattatttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgattgattttac--aaaaaaaaataatactaaatat 26617429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 8572423 - 8572323
Alignment:
Q  38 caatcaaaatcgaaggat-ttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||| ||| ||| ||||  || ||||||||||||||| | |||||| |||||| |||||||||||  |||||||||||| ||| ||||||    
T  8572423 caatcaaaatcgaaagatgttaatcaaggacatttgtagaattgatata-gaaattataaaattgcaatcaaaatcaatggattttacccaaaaaaaaat 8572325  T
Q  137 aa 138  Q
    ||    
T  8572324 aa 8572323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 11326592 - 11326484
Alignment:
Q  17 caaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| ||||||| ||||||||  |||||||| |||| |||| ||||||  |||||||| ||||  ||| | ||||||||||||||||||||||||| |    
T  11326592 caaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggacttttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcg 11326493  T
Q  114 atggatttt 122  Q
    || ||||||    
T  11326492 atagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 383
Target Start/End: Complemental strand, 30294275 - 30294195
Alignment:
Q  300 gattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||||| |||||| | ||| | |||||||| |||||||   |||||||| |||||| |||||||||||||||||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaa 30294195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 4574952 - 4574892
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||| ||||||||||| ||||||| ||| ||||||||||||| |||||||||||| |||||    
T  4574952 aaatcgtaaaatcgcagtcaaaatcgatagattttaccaaaataaaaataatgcttaatat 4574892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 8254018 - 8254096
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcat 170  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||    
T  8254018 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 8254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 1977834 - 1977761
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaat 111  Q
    |||||||||||||||||||| |||||| || |||| |||||| |||| |||||||  ||||||||||||||||||    
T  1977834 caatcaaaatcgaaggattttactcaattattttt-tagaatcgatataagaaatcctaaaatcgcaatcaaaat 1977761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 4574558 - 4574480
Alignment:
Q  316 aaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    ||||||| | ||| || ||| |||||||||||||  ||| ||||||||| |||||||||||||||||| ||| ||||||    
T  4574558 aaattctgcaatgaatttgaatcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgatttt 4574480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 7307232 - 7307173
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||| ||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||    
T  7307232 aaatcgtaaaatcgcaatcaaaatcgaag-attctaccaaaacaaaaataatgttaaatat 7307173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 26340279 - 26340335
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa 144  Q
    |||| |||||||| |||||||||| |||  ||| |||||||||||||||||||||||    
T  26340279 aaatcgtaaaatcacaatcaaaatcgataaattctaccaaaacaaaaataatgctaa 26340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 8629995 - 8630090
Alignment:
Q  311 ttttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||| |||||||||||||| ||||||||||||| | |  ||| | |||||||||| |||||| ||| |||| ||  |||||| || ||||||||    
T  8629995 ttttaagattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaatgat 8630090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 22687087 - 22687194
Alignment:
Q  17 caaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||| || |||||||||||  | |||||| |||| |||| ||||||||||||||||||||| |||| |||        |||||||||||||||| |    
T  22687087 caaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactacttttgtagaatcgatataag--------aaatcgcaatcaaaattg 22687178  T
Q  114 atggattttaccaaaa 129  Q
    |||||||||| |||||    
T  22687179 atggattttatcaaaa 22687194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 8304302 - 8304176
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa----atatgctattaattgtatatagtcatatatgacttaa-tttaaag 188  Q
    |||||| ||||||||||| || ||||| ||||||||||||||||||  |||    ||||| ||| ||||| ||||||||||| ||| || || || ||||    
T  8304302 taaaattgcaatcaaaatcga-ggattctaccaaaacaaaaataattttaaaaatatatgttataaattgcatatagtcataaatgtctaaagttcaaag 8304204  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    |||| ||||| | |||| ||||||||||    
T  8304203 tccaaaaaatgcatatatataaatgact 8304176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 20570872 - 20570938
Alignment:
Q  261 attttgtatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactat 327  Q
    ||||| || ||||||||||||| |||| ||||||| ||||||||||  |||||| | ||||||||||    
T  20570872 attttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactat 20570938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 27221553 - 27221511
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattttaccaa 127  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||    
T  27221553 aagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaa 27221511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22687658 - 22687695
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  22687658 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 22687695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 7e-56; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 182 - 403
Target Start/End: Original strand, 24649597 - 24649818
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaa 281  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24649597 tttaaagttcacaaaatacttatacataaatgactaaaaaa-atggataaaattcttcaaaaccctttaaaatcctgcgatattgtatgaaatcgtaaaa 24649695  T
Q  282 tcgcaaacaaaatcaatggattttgc-ttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatt 380  Q
    || ||  ||||||  ||| ||||||| |||||||  ||||||||||||||| ||||||||||||||||||| || ||  |||||||| ||||||| ||||    
T  24649696 tcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacgatt 24649795  T
Q  381 taaatcaggattttaactacaat 403  Q
    ||| || ||||||| || |||||    
T  24649796 taagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 38 - 249
Target Start/End: Complemental strand, 27676722 - 27676511
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||||| |||||||| ||||||||||  ||||||||||||||||||||||     
T  27676722 caatcaaaatcgaaagattttactcaactacttttgtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaaaacaaaaac 27676623  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    |||| |||  ||||| ||| |||| |||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||  ||| |||||||||||    
T  27676622 aatgttaaatatatgttataaattatatatagtcataaatgactcggtttaaa-tccacaaaatacttatacataaatgacta--aaaaatggacaaaat 27676526  T
Q  235 tcttcaaaacccttt 249  Q
     ||| ||| ||||||    
T  27676525 ccttaaaaccccttt 27676511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 38 - 270
Target Start/End: Complemental strand, 17796851 - 17796620
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||| |||||||||| |||| ||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||| ||||||| |  |||||| ||||||    
T  17796851 caattaaaatcgaagcattttactcaactacttttgtagaatcgata--agaaatcgtaaaatcgaaatcaaaattgatggatgt--ccaaaataaaaat 17796756  T
Q  137 aatgctaaata--tgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    | ||| |||||  || ||| ||||||||||| | ||| |||||||  |||||||| ||||||| ||||||| |||||||||||| ||| || ||||||||    
T  17796755 agtgcaaaataactgttataaattgtatatattaataaatgacttggtttaaagttcacaaaacacttataaataaatgactaaaaaaaatagacaaaat 17796656  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
      || |||||||||||||||| ||| ||||||||||    
T  17796655 cattaaaaaccctttaaaatcctgcaattttgtatg 17796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 38 - 270
Target Start/End: Complemental strand, 19105291 - 19105060
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||| |||||||||| |||| ||||||||||||||||||||| ||||  |||||| ||||||||| ||||||||| ||||||| |  |||||| ||||||    
T  19105291 caattaaaatcgaagcattttactcaactacttttgtagaatcgata--agaaatcgtaaaatcgaaatcaaaattgatggatgt--ccaaaataaaaat 19105196  T
Q  137 aatgctaaata--tgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
    | ||| |||||  || ||| ||||||||||| | ||| |||||||  |||||||| ||||||| ||||||| |||||||||||| ||| || ||||||||    
T  19105195 agtgcaaaataactgttataaattgtatatattaataaatgacttggtttaaagttcacaaaacacttataaataaatgactaaaaaaaatagacaaaat 19105096  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
      || |||||||||||||||| ||| ||||||||||    
T  19105095 cattaaaaaccctttaaaatcctgcaattttgtatg 19105060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 393
Target Start/End: Original strand, 10872817 - 10873065
Alignment:
Q  145 atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaac 244  Q
    ||||| ||| |||||||| | |||||| ||||| || |||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  10872817 atatgttataaattgtattttgtcataaatgacatagtttaaagtccacaaaatacttaaacataaatgactaaaaaaaatggacaaaatccttcaaaac 10872916  T
Q  245 cctttaaaatcttgcgattttgtatgaaatcgtaaaatcgcaaacaaaatcaat-ggattttgcttattttaaaattctactatggatctgagtcgttga 343  Q
    | |||||||||||| |||||||||||  ||  ||| ||      | |  | | | ||||||||| |||||| | ||||| |||||||| |||||||||||    
T  10872917 cttttaaaatcttgtgattttgtatg-gattttaagattttgtgcgattttactaggattttgcctattttgagattctgctatggatttgagtcgttga 10873015  T
Q  344 aggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattt 393  Q
    ||||||| || ||| ||||||||||||||||||||||| |||| ||||||    
T  10873016 aggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 405
Target Start/End: Complemental strand, 28745903 - 28745768
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||||  |||||| | ||||||||||| || |||||||||||||||||||||| ||||||||||||      
T  28745903 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 28745804  T
Q  370 attttaggatttaaatcaggattttaactacaatga 405  Q
    ||||||||||||||||| ||||||| || |||||||    
T  28745803 attttaggatttaaatcgggattttgacaacaatga 28745768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 20756172 - 20756039
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||| |||| ||||||| || |||||||| |||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||     
T  20756172 gaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctga 20756073  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    ||||||  |||||| || ||||||| || |||||    
T  20756072 attttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 28746085 - 28745913
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  |||||||||||||| |||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  28746085 caaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 28745986  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||| ||| |||| ||||  |||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  28745985 atggattttacccaaa-aaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagttta 28745913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 29067417 - 29067283
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||||||||||  ||||||   |||||||||||||| |||||||||||||||||||||| |||||||||||||     
T  29067417 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 29067318  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||| |||||| || ||||||| || ||||||    
T  29067317 attttagaatttaagtcgggattttgacaacaatg 29067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 17064618 - 17064483
Alignment:
Q  15 atcaaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaat 111  Q
    ||||||||||  | ||||||||||  ||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||||||| |||||||||||    
T  17064618 atcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaaaat 17064519  T
Q  112 ggatggattttaccaaaacaaaaataatgctaaatat 148  Q
     ||||||||||||||||| ||||| ||| ||||||||    
T  17064518 cgatggattttaccaaaa-aaaaaaaatactaaatat 17064483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 13286243 - 13286123
Alignment:
Q  27 actcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggatttta 123  Q
    ||||||||||||  |||||||||| || ||||| ||||||||||||||||||||| |||| ||||||| |||||||| |||| ||||| |||||||||||    
T  13286243 actcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggatttta 13286144  T
Q  124 ccaaaacaaaaataatgctaa 144  Q
    |||||||||||||||| ||||    
T  13286143 ccaaaacaaaaataatactaa 13286123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 6136412 - 6136519
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||| || ||||| |||||||||||||| |||||| |||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  6136412 caatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttaccaaaacaaaaat 6136511  T
Q  137 aatgctaa 144  Q
    ||| ||||    
T  6136512 aatactaa 6136519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 28136070 - 28135940
Alignment:
Q  18 aaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||| || ||||||||||   |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| | |||||||||  |    
T  28136070 aaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaatcaa 28135971  T
Q  115 tggattttaccaaaacaaaaataatgctaaa 145  Q
    |  ||||||||||||||||||||||| ||||    
T  28135970 tatattttaccaaaacaaaaataatgttaaa 28135940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 3449157 - 3449262
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||| ||||| | ||||||||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||||||  |||||||||     
T  3449157 caaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttaccaaa--aaaaataata 3449254  T
Q  141 ctaaatat 148  Q
    ||||||||    
T  3449255 ctaaatat 3449262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 3449288 - 3449411
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||||||  |||||| ||||||||||| |||||||  |||||||||| ||| | || |||||||||| |||||| |||||||||||||     
T  3449288 gaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctga 3449386  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||||||||||| || |||||||    
T  3449387 attttaggatttaagtcgggatttt 3449411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 17064454 - 17064330
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||||||  |||||| ||| ||||||  ||||||| |||||||||||| ||  ||||||||||||||||| | |||||||||||||||     
T  17064454 gaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctga 17064355  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    |||||| ||||||| || |||||||    
T  17064354 attttaagatttaagtcgggatttt 17064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 20756332 - 20756198
Alignment:
Q  16 tcaaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatg 112  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||| ||||||  | ||||||||||| |||| | |||||||||||||||||||||||||     
T  20756332 tcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatc 20756233  T
Q  113 gatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||| ||| | ||||||| ||||||||    
T  20756232 gatggattttacccaaa-agaaataatactaaatat 20756198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 25870169 - 25870275
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    ||||||| |||||||| |||||||||  |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||     
T  25870169 caaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaa-aacaataata 25870267  T
Q  141 ctaaatat 148  Q
    ||||||||    
T  25870268 ctaaatat 25870275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 10872558 - 10872668
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||| ||||||||| ||| ||||||||||| ||||| |||| ||||||| ||||||||  ||| ||||| ||||||||||||||||||||||||    
T  10872558 caatcaaaattgaaggattttactaaactacttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttaccaaaacaaaaat 10872657  T
Q  137 aatgctaaata 147  Q
    |||| ||||||    
T  10872658 aatgttaaata 10872668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 396
Target Start/End: Complemental strand, 21963554 - 21963436
Alignment:
Q  278 aaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    |||||||| | ||||||| ||||||||||| |||||||  ||| |||||||||| ||||||||| |||||||||||| ||| |||||| || ||||||||    
T  21963554 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21963455  T
Q  378 atttaaatcaggattttaa 396  Q
    |||||| || |||||||||    
T  21963454 atttaagtcgggattttaa 21963436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 396
Target Start/End: Complemental strand, 21985990 - 21985872
Alignment:
Q  278 aaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    |||||||| | ||||||| ||||||||||| |||||||  ||| |||||||||| ||||||||| |||||||||||| ||| |||||| || ||||||||    
T  21985990 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21985891  T
Q  378 atttaaatcaggattttaa 396  Q
    |||||| || |||||||||    
T  21985890 atttaagtcgggattttaa 21985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 42697129 - 42696984
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgc 141  Q
    ||||| ||||||||| | ||||||||||||||||||| |||| |||||||  |||| ||||||||||||| ||||||||||||||||| ||||| ||| |    
T  42697129 aaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaaaaaaaaaaaaatac 42697030  T
Q  142 taa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
     ||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  42697029 caaatatatgttataaatggtatatagtcataaatgacttagttta 42696984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 24620017 - 24620137
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| |||||| ||||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| |  |||||||||||||||||||||||| |    
T  24620017 caaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattg 24620116  T
Q  114 atggattttaccaaaacaaaa 134  Q
     ||||||||||||||| ||||    
T  24620117 ttggattttaccaaaaaaaaa 24620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 19348770 - 19348648
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgact-taatttaaagt 189  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||| |||||| ||||| |||||    
T  19348770 gtaaaatcgcaatcaaaatcga-ggattataccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactataattcaaagt 19348672  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    ||||| ||||| ||||||||||||    
T  19348671 ccacataatacatatacataaatg 19348648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 39428035 - 39427911
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||| ||||  ||||||   |||||||||| ||| |||||||||||| ||||||||| | ||||||||| ||    
T  39428035 gaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccagg 39427936  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||||||  ||||||||| |||||||    
T  39427935 attttaaaatttaaatcgggatttt 39427911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 22137545 - 22137419
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat-gctat 153  Q
    |||||||||||||||||||||||| |||| ||||||| |||||| |  ||||||||| |||||||||||| |||| |  |||||| |||||||| | |||    
T  22137545 tttactcaactacttttgtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggattttacaaaaaaattaataatactaaatatagttat 22137446  T
Q  154 taattgtatatagtcatatatgactta 180  Q
     ||| ||||||||||||| ||||||||    
T  22137445 aaatagtatatagtcataaatgactta 22137419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 383
Target Start/End: Original strand, 22494780 - 22494890
Alignment:
Q  273 atcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggatt 372  Q
    ||||||||||||||| ||||||| ||| |||||| ||||||||  ||||||||||| || | |||||||||||||||| ||| ||||||||||   ||||    
T  22494780 atcgtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagatt 22494879  T
Q  373 ttaggatttaa 383  Q
    |||||||||||    
T  22494880 ttaggatttaa 22494890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 39428216 - 39428039
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatca----aaatcgaagga-tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaa 109  Q
    |||||||||||||| ||||||  ||||||    ||||||||||| |||||||||  | |||||| |||| |||| | |||||||||||||||||||||||    
T  39428216 caaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagatttttgtggaatcgatataggaaattgtaaaatcgcaatcaaa 39428117  T
Q  110 atggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    || ||||||||||||| ||| |||| |||| ||||  ||||| ||| | | ||||||||||||| |||||||| ||||    
T  39428116 atcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagttta 39428039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 277 - 394
Target Start/End: Original strand, 30727694 - 30727811
Alignment:
Q  277 taaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttag 376  Q
    ||||||||||| ||||||| ||| ||||||  ||||||   |||||||||| ||| |||||||||||||||||||||| ||| ||||| | ||||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  377 gatttaaatcaggatttt 394  Q
    ||||||| ||||||||||    
T  30727794 gatttaagtcaggatttt 30727811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 8156126 - 8156261
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttg-cttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctg 368  Q
    |||||||||||||||||| ||||||| |||||||||| || |||||   ||| |||||||||| |||||| ||||||||||| ||||||| ||||| |||    
T  8156126 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctg 8156225  T
Q  369 gattttaggatttaaatcaggattttaactacaatg 404  Q
     ||||||| |||||| |  ||||||| || ||||||    
T  8156226 aattttagaatttaagttgggattttgacaacaatg 8156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 278 - 396
Target Start/End: Complemental strand, 22137403 - 22137285
Alignment:
Q  278 aaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    ||||||||||  |||||| ||||||||||| ||||||   ||| |||||||||| |||| |||| |||||||||||| ||| || ||| || ||||||||    
T  22137403 aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttagg 22137304  T
Q  378 atttaaatcaggattttaa 396  Q
    |||||| ||||||||||||    
T  22137303 atttaagtcaggattttaa 22137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 6861039 - 6861165
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatga--cttaatttaaagt 189  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| |||||  ||||| ||| |||||| |||||||||| ||||  |  | ||||||||    
T  6861039 taaaatcgcaatcaaaatcgatggattctaccaaaacaaaaataaagctaactatatgttataaattgtctatagtcataaatgattcgaagtttaaagt 6861138  T
Q  190 ccacaaaatacttatacataaatgact 216  Q
     ||||||| | ||||||||| ||||||    
T  6861139 gcacaaaacatttatacatatatgact 6861165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 8155980 - 8156063
Alignment:
Q  46 atcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||| || | |||||||||||||||    
T  8155980 atcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaaa 8156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 9152832 - 9152975
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||| ||||| ||||||||| ||||||||||| |||  | |||||||||||||| |||||||||| ||| |||||||||||||  | ||||||     
T  9152832 caaaatcgaaagatttgactcaactatttttgtagaatcgatt-atgaaattgtaaaatcacaatcaaaatcgatagattttaccaaaaacacaataata 9152930  T
Q  141 ctaaatatgctattaattgtatatagtcatatatgacttaattta 185  Q
     ||||||||||||  ||  |||||||||||| || ||||| ||||    
T  9152931 ttaaatatgctatacatgatatatagtcataaataacttagttta 9152975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 29067585 - 29067464
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| |||| |||||||  ||||||| ||||||||||| ||||||  | ||||||||||||||||   ||| ||||||||||||||||||||| |    
T  29067585 caaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcg 29067487  T
Q  114 atggattttaccaaaacaaaaat 136  Q
    |||||||||||| ||| ||||||    
T  29067486 atggattttacccaaaaaaaaat 29067464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 18014208 - 18014089
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    ||||||||||||||||||| || ||||| || ||||||||||||||||||||  ||||| ||| |||||   ||||||||| |||||| || || |||||    
T  18014208 gtaaaatcgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaattg--catagtcataaatgactaaagttcaaagt 18014112  T
Q  190 ccacaaaatacttatacataaat 212  Q
    ||||||||||| |||||||||||    
T  18014111 ccacaaaatacatatacataaat 18014089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 405
Target Start/End: Original strand, 24620196 - 24620334
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaa---atcgcaaaatcc 366  Q
    ||||||||||||| ||||  |||||| ||| ||||||| |||||| | |||||||| || || ||||||||||||||||||||||    ||||||||||     
T  24620196 gaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatct 24620295  T
Q  367 tggattttaggatttaaatcaggattttaactacaatga 405  Q
    |  |||||||||||||| || | ||||| || |||||||    
T  24620296 taaattttaggatttaagtcggaattttgacaacaatga 24620334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 22356048 - 22356162
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtg-aagaaaatcgcaaaatcctg 368  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||   | | ||||||| || || ||||||  |||||||||    
T  22356048 gaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctg 22356147  T
Q  369 gattttaggatttaa 383  Q
     ||||||||||||||    
T  22356148 aattttaggatttaa 22356162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 22971118 - 22970903
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaa-------------ttgtaaaatc 100  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||  |||||||||||||||||  | || |             | |||||||     
T  22971118 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaattgatgtaggatagcaaagtcccgactcgtaaaatt 22971019  T
Q  101 gcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatata-tgacttaattt-aaagtccacaaa 196  Q
    ||||||||||| || ||||| ||||||||||||||||||| || ||||  | ||| ||||| ||||||||||| | ||||| || || ||||||||||||    
T  22971018 gcaatcaaaatcga-ggattctaccaaaacaaaaataatgttatatatatgttataaattgcatatagtcataaaatgactaaagttcaaagtccacaaa 22970920  T
Q  197 atacttatacataaatg 213  Q
    |||| ||||||||||||    
T  22970919 atacatatacataaatg 22970903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 408
Target Start/End: Original strand, 25870363 - 25870510
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatca-----atggattttgcttattttaaaattctactatggatctgag----tcgttgaaggtgaagaaaatcgca 360  Q
    |||||||||||||||||| ||||||||     ||||||||||| |||||| |  |||||||| | || ||||    ||||||||| |||||||| || ||    
T  25870363 gaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcaca 25870462  T
Q  361 aaatcctggattttaggatttaaatcaggattttaactacaatgatgt 408  Q
    ||||| ||||||||||||||||| ||  |||||| || ||||||||||    
T  25870463 aaatcttggattttaggatttaagtcgagattttgacaacaatgatgt 25870510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 27676441 - 27676355
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||| |||||||| |||||| | ||||||||| ||| ||||||||||||| |||||| ||||||| |||||||||| || ||||||    
T  27676441 attctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgacaacaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 8592311 - 8592421
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||| |||||||||  ||  |||    
T  8592311 gtaaaatcgcaatcaaaatcaa-ggattctaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataaatgacttaaagttcgaag 8592409  T
Q  189 tccacaaaatac 200  Q
    ||||||||||||    
T  8592410 tccacaaaatac 8592421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 15515106 - 15515248
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgc 141  Q
    |||||||||| |||| |||||||||||||| ||||||   || |||||||||||||||   ||| |||||  ||||||||||||||   ||||||||| |    
T  15515106 aaaatcgaagtattttactcaactacttttatagaatcattagaagaaattgtaaaattataataaaaatccatggattttaccaa---aaaaataatac 15515202  T
Q  142 taa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  15515203 taaatatatgttataaatggtatatagtcataaatgacttagttta 15515248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 22355886 - 22355997
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  |||||||||| || ||||| | ||||  ||||||||| ||| ||||    ||||||||||| ||||| |||||| |    
T  22355886 caaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaaaatcgata----aaattgtaaaaccgcaaacaaaatcg 22355981  T
Q  114 atggattttaccaaaa 129  Q
    ||||||||||||||||    
T  22355982 atggattttaccaaaa 22355997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 15806550 - 15806635
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||| |||||||| |||||| ||||||||||| ||| ||||||||| ||||||| |||||||||| || ||||||| || ||||||    
T  15806550 attctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgacaacaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 3041532 - 3041469
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaa 77  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||  ||||||||||||    
T  3041532 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaa 3041469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 42696980 - 42696920
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatgga 330  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||| | |||||||||||||    
T  42696980 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 15806286 - 15806337
Alignment:
Q  97 aatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||| ||||| ||| |||||||| |||||||||||||||||||||||||||    
T  15806286 aatcgtaatcagaattgatggattctaccaaaacaaaaataatgctaaatat 15806337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 8592219 - 8592288
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaattgata 83  Q
    |||||||| |||||||||||||  |||||||||||||||| |||||||||  ||||||||||||| ||||    
T  8592219 caaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgata 8592288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 9169890 - 9169806
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatga 176  Q
    ||||||| ||||||||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||| ||||    
T  9169890 gtaaaattgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatga 9169806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 10591861 - 10591808
Alignment:
Q  94 taaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||||| ||||||||||| || ||||| |||||||||||||||||||||||||||    
T  10591861 taaaattgcaatcaaaattga-ggattctaccaaaacaaaaataatgctaaatat 10591808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 15806407 - 15806485
Alignment:
Q  165 agtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaa 243  Q
    ||||||| ||||||   |||||||||||| |||||||||||||||||||| |   ||| |||||||||||| |||||||    
T  15806407 agtcataaatgactcggtttaaagtccacgaaatacttatacataaatgattggaaaaaatggacaaaattgttcaaaa 15806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 21963699 - 21963625
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    ||||||||| ||||||| |||||| |||| ||||||| |||||| |  ||||||||| |||||||||||| ||||    
T  21963699 tttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttacaaaaa 21963625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 21986135 - 21986061
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    ||||||||| ||||||| |||||| |||| ||||||| |||||| |  ||||||||| |||||||||||| ||||    
T  21986135 tttactcaattacttttatagaatcgatataagaaatcgtaaaaccagaatcaaaattgatggattttacaaaaa 21986061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 386
Target Start/End: Complemental strand, 28135824 - 28135739
Alignment:
Q  301 attttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatc 386  Q
    ||||||| ||||| | |||| | |||||||| ||||||  |||| ||||| ||| ||||||||||||| |||||| ||||||||||    
T  28135824 attttgcctatttgagaattttgctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatc 28135739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 22494679 - 22494723
Alignment:
Q  91 ttgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||    
T  22494679 ttgtaaaatcgcaatcaaaatagatggattttacccaaaaaaaaa 22494723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 3041440 - 3041386
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||| ||||| || ||||| ||||||||||||||||||| |||||||    
T  3041440 gtaaaatcgcaattaaaatcga-ggattctaccaaaacaaaaataatgttaaatat 3041386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 21553804 - 21553850
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  21553804 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatg 21553850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 8566188 - 8566250
Alignment:
Q  155 aattgtatatagtcatatatgacttaattta-aagtccacaaaatacttatacataaatgact 216  Q
    ||||| ||||||||||| |||||| || ||  ||||||||||||||| |||||||||||||||    
T  8566188 aattgcatatagtcataaatgactaaagttcgaagtccacaaaatacatatacataaatgact 8566250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 8156124 - 8156161
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  8156124 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 8156161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 26208285 - 26208228
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaa 145  Q
    ||||| |||||||||||| ||||| |||||||| || ||||| |||||||||| ||||    
T  26208285 aaattctaaaatcgcaattaaaattgatggattctatcaaaataaaaataatgttaaa 26208228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 249
Target Start/End: Original strand, 8803 - 9015
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||    
T  8803 aatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaagata 8902  T
Q  138 atgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaatt 235  Q
    |||||||  ||||| ||| | ||||||||||||||| |||||| | |||||  |||||| ||||||||||  ||||||||||| ||| ||||||||  |     
T  8903 atgctaaatatatgttataagttgtatatagtcataaatgactcagtttaatttccacacaatacttatatgtaaatgactaa-aaaaatggacaacctc 9001  T
Q  236 cttcaaaacccttt 249  Q
    ||||||||||||||    
T  9002 cttcaaaacccttt 9015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 9070 - 9152
Alignment:
Q  324 ctatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||| |||||||||||||||||| |||||| |||||||||  ||||||  ||||||||||||||||| || ||||||||    
T  9070 ctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaatgat 9152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 15761207 - 15761436
Alignment:
Q  44 aaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgct 142  Q
    |||||||||||||| |||||| |||||||||||||| |||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15761207 aaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatgct 15761306  T
Q  143 aa--atatgctattaattgtatat--agtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattctt 238  Q
    ||  ||||| ||| ||||||||||  ||||||| |||| | | |||||| | ||||||||| ||||||  | || |||||  || ||||||||||| |||    
T  15761307 aaatatatgttataaattgtatatagagtcataaatgagtaagtttaaaattcacaaaatagttatac--acataactaaataaaatggacaaaatcctt 15761404  T
Q  239 caaaaccctttaaaatcttgcgattttgtatg 270  Q
    ||||||||||||||||||| ||| ||||||||    
T  15761405 caaaaccctttaaaatctttcgactttgtatg 15761436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 271 - 383
Target Start/End: Original strand, 3094250 - 3094362
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgga 370  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||| | ||||||||||| |    
T  3094250 aaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaa 3094349  T
Q  371 ttttaggatttaa 383  Q
    ||||| |||||||    
T  3094350 ttttaagatttaa 3094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 244
Target Start/End: Complemental strand, 8582311 - 8582121
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgcta 152  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||| |||| |||||||||||||| |||||||| |||  ||||| ||    
T  8582311 tttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttaccaaaacataaataatgttaaatatatgtta 8582212  T
Q  153 ttaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaac 244  Q
    |  ||||||  |||| ||| || ||   ||||||||||||||||||| |||||||||||| | ||| ||| ||| ||||||| |||||||||    
T  8582211 tacattgtaattagttataaattac-cgatttaaagtccacaaaatatttatacataaattattaaaaaaaatgaacaaaatccttcaaaac 8582121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 17566384 - 17566213
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaac-aaaaa 135  Q
    ||||||||||||||| |||| ||||||||||||||||||||  |||| |||||||||||||||||||||||      ||||||||||||||||| |||||    
T  17566384 caatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatca------atggattttaccaaaacaaaaaa 17566291  T
Q  136 taatgctaaatatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaa 218  Q
     |||||||||     ||| ||||||||||||||||  ||| |||| |||||||| ||||||||||| ||| ||||||||||||    
T  17566290 aaatgctaaa-----tataaattgtatatagtcattaatggcttagtttaaagttcacaaaatactcatagataaatgactaa 17566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 5922182 - 5922048
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||| |||||||||| ||||||| ||||||||||  ||||||   |||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  5922182 gaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctgg 5922083  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  5922082 attttaggatttaagtcgggattttgacaacaatg 5922048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 15294803 - 15294666
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| ||||||||||| ||||||   |||||||||| ||| |||||||||||||||||| ||| |||||||||||||     
T  15294803 gaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctga 15294704  T
Q  370 attttaggatttaaatcaggattttaactacaatgatg 407  Q
    |||||||||||||| || ||||||| || ||| |||||    
T  15294703 attttaggatttaagtcgggatttttacaacattgatg 15294666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 15475172 - 15475035
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| ||||||||||| ||||||   |||||||||| ||| |||||||||||||||||| ||| |||||||||||||     
T  15475172 gaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctga 15475073  T
Q  370 attttaggatttaaatcaggattttaactacaatgatg 407  Q
    |||||||||||||| || ||||||| || ||| |||||    
T  15475072 attttaggatttaagtcgggatttttacaacattgatg 15475035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 22910198 - 22910311
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||| ||| ||||||||      
T  22910198 gaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaa 22910297  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  22910298 attttaggatttaa 22910311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 11879733 - 11879597
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||| | |||||||  |||||||||| ||| |||||||||||| ||||||||| | |||||||||||     
T  11879733 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11879634  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| |||| ||||| || ||||||||    
T  11879633 attttaggatttaagtcagaattttgacaacaatgat 11879597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 11897149 - 11897013
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||| | |||||||  |||||||||| ||| |||||||||||| ||||||||| | |||||||||||     
T  11897149 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11897050  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| |||| ||||| || ||||||||    
T  11897049 attttaggatttaagtcagaattttgacaacaatgat 11897013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 31424296 - 31424172
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||   ||||| |||||||| |||||||||||| | ||||||| ||| |||||||||     
T  31424296 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctga 31424197  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||||||| |||||| ||||||||||    
T  31424196 attttagaatttaagtcaggatttt 31424172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 45403160 - 45403049
Alignment:
Q  272 aatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggat 371  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | ||||| |||||||| | ||||||||||||| |||||| |||||||||| |||||    
T  45403160 aatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggat 45403061  T
Q  372 tttaggatttaa 383  Q
    ||||| ||||||    
T  45403060 tttagaatttaa 45403049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 29384159 - 29384253
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  29384159 caaaatcgaaggattttactcaactacttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaa 29384253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 6810957 - 6810861
Alignment:
Q  267 tatgaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaat 364  Q
    |||||||||||||||||| || ||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  6810957 tatgaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 17647283 - 17647191
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  17647283 caatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaa 17647191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 23142431 - 23142312
Alignment:
Q  66 acttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtata 163  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||||  || |||||| ||||  ||||| ||| ||| |||||    
T  23142431 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaa--aataataatactaaatatatgttataaatggtata 23142334  T
Q  164 tagtcatatatgacttaattta 185  Q
    |||||||| |||||||||||||    
T  23142333 tagtcataaatgacttaattta 23142312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 19704451 - 19704565
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcc-tg 368  Q
    ||||||||||||| |||| ||||||| ||||||||||| |||| |  ||||||||||||||| |||||||||||||||||||||| |||||||| || ||    
T  19704451 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttg 19704550  T
Q  369 gattttaggatttaa 383  Q
     |||||| |||||||    
T  19704551 aattttaagatttaa 19704565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 6811101 - 6810997
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    ||||||||||| |||| | ||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||     
T  6811101 caaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttaccaaa--aaaaataata 6811005  T
Q  141 ctaaatat 148  Q
    ||||||||    
T  6811004 ctaaatat 6810997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 26575017 - 26575147
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgct--aaatatgctattaattgtatatagtcatatatgacttaa--tt 183  Q
    |||| ||||||| ||||||||||| |||||||| ||||||||||||| | |||||  ||||||| | | ||||| ||||| ||||| |||||| ||  ||    
T  26575017 aaatcgtaaaatagcaatcaaaatcgatggattctaccaaaacaaaattgatgctaaaaatatgttttaaattgaatataatcataaatgactcaaagtt 26575116  T
Q  184 taaagtccacaaaatacttatacataaatga 214  Q
    |||||||||||||||||||||||||||||||    
T  26575117 taaagtccacaaaatacttatacataaatga 26575147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 394
Target Start/End: Original strand, 29384313 - 29384436
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| |||| || ||| ||||||| ||||||   ||| |||||||||| |||||||||||||||||||||| ||||||||||   |    
T  29384313 gaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaag 29384411  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||||||||||||||| | |||||||    
T  29384412 attttaggatttaaacctggatttt 29384436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 45403338 - 45403205
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||| |||||||||||||  ||||||||||||||||||| ||| ||  ||||||||||||| |||| | |||||||||||| |||||||||||| |    
T  45403338 caaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttgtagaatcgatataggaaattgtaaaa-cgcaatcaaaatcg 45403240  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    || ||||||||||||| || ||||||  |||||||    
T  45403239 atagattttaccaaaaaaataataatattaaatat 45403205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 11879908 - 11879737
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||| ||||||||||||  ||||||||||||||||||| ||  ||  |||||| |||||| |||| |  |||||||||||||||| ||||||| ||    
T  11879908 aaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcga 11879809  T
Q  115 tggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| || ||||| ||||    
T  11879808 tggattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaattacttagttta 11879737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 11897324 - 11897153
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    |||||||| ||||||||||||  ||||||||||||||||||| ||  ||  |||||| |||||| |||| |  |||||||||||||||| ||||||| ||    
T  11897324 aaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcga 11897225  T
Q  115 tggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| || ||||| ||||    
T  11897224 tggattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaattacttagttta 11897153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 24056414 - 24056523
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    ||||||||||||||||||| ||||||||| |||||||||||  ||| || ||||  |||||||||||||| ||| ||| ||||||| |||||||||||||    
T  24056414 aatcaaaatcgaaggattttactcaactagttttgtagaatcaatataacaaatgttaaaatcgcaatcataatcgatagattttatcaaaacaaaaata 24056513  T
Q  138 atgctaaata 147  Q
    ||| ||||||    
T  24056514 atgttaaata 24056523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 27836460 - 27836569
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| ||||||| | || ||||||  ||| ||||||||||||||| ||||||||||||||| | ||| |||||||||||| |||| ||||||||||||     
T  27836460 gaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctga 27836559  T
Q  370 attttaggat 379  Q
    ||||||||||    
T  27836560 attttaggat 27836569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 210
Target Start/End: Original strand, 1018060 - 1018199
Alignment:
Q  73 tagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaat--atgctattaattgtatatagtcat 170  Q
    |||||| |||| |||| || | |||| |||||||||||| ||| |||| |||||||| |||||||||| |||||  ||| ||| |||| |||||||||||    
T  1018060 tagaatcgatataagatatcgcaaaagcgcaatcaaaatcgatagattctaccaaaataaaaataatgttaaatgtatgttataaattatatatagtcat 1018159  T
Q  171 atatgacttaatttaaagtccacaaaatacttatacataa 210  Q
    | |||||  | ||||||||| |||||||||||||||||||    
T  1018160 aaatgacccactttaaagtcaacaaaatacttatacataa 1018199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 5922334 - 5922186
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||  ||| ||||||||||||| ||| |||  |    
T  5922334 caatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc-taatcgatggattttacccaaa-aaattt 5922237  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||| ||||  ||||| ||| ||| ||||||||||||| ||||| |||||||    
T  5922236 aatactaaatatatgttatgaatggtatatagtcataaatgacctaattta 5922186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 7489111 - 7489275
Alignment:
Q  25 ggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattt 121  Q
    ||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||||||| |||| |  |||||||||||||||||||||||| |||| ||||    
T  7489111 ggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattt 7489210  T
Q  122 taccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||  ||| || | |||| ||||  ||||| ||| |||  |||||||||||| |||||||||||||    
T  7489211 tactcaaa-aatattaatactaaatatatgttataaatgatatatagtcataaatgacttaattta 7489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 15294977 - 15294846
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||||  |||||||||||||  ||| |||||||  ||||||||||| ||||||  |    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15294878  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||| ||  ||||||||| ||||||||    
T  15294877 tggattttacctaa--aaaaataatactaaatat 15294846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 15475346 - 15475215
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||||  |||||||||||||  ||| |||||||  ||||||||||| ||||||  |    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15475247  T
Q  115 tggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||| ||  ||||||||| ||||||||    
T  15475246 tggattttacctaa--aaaaataatactaaatat 15475215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 17647126 - 17647013
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||| ||||  ||| ||||||| ||| ||||| | ||||||   ||||||||||| || |||||||||||||||||||||| |||||||||||||     
T  17647126 gaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 17647027  T
Q  370 attttaggatttaa 383  Q
    |||||| |||||||    
T  17647026 attttatgatttaa 17647013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 23142308 - 23142223
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaa 355  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||| | ||||||||||| |||||||||    
T  23142308 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaagaaaa 23142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 19704277 - 19704398
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  |||||||||| ||||| |||||||||  ||| ||||||||| ||||   |||||  ||||||| |||||||||| |    
T  19704277 caaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttgaaatcttaaaatcacaatcaaaatcg 19704376  T
Q  114 atggattttaccaaaacaaaaa 135  Q
    |||||||||||| ||| |||||    
T  19704377 atggattttacctaaaaaaaaa 19704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 404
Target Start/End: Original strand, 477108 - 477177
Alignment:
Q  335 agtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||| |||||||||| || ||||||    
T  477108 agtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 30240264 - 30240324
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggattctaccaaaacaaaaataatactaaatat 30240324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 15231889 - 15231835
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaa 109  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  15231889 tttactcaactacttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaa 15231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 394
Target Start/End: Original strand, 24056618 - 24056688
Alignment:
Q  324 ctatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    |||||||| ||||||||| || ||||| ||| |||||||||||||||||||||||||||| ||| ||||||    
T  24056618 ctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagatttt 24056688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 3094092 - 3094235
Alignment:
Q  43 aaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaa-tcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    ||||| ||||||||| |||||| |||||||||||     ||| |||||||||||||| ||||||||||||| ||| |||||||| |||| ||||| |||     
T  3094092 aaaattgaaggattttactcaattacttttgtaggc---atataagaaattgtaaaaatcgcaatcaaaattgatagattttacaaaaaaaaaaaaaata 3094188  T
Q  141 ctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  3094189 ctaaatatatgttataaatggtatatagtcataaatgacttagttta 3094235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 395
Target Start/End: Complemental strand, 15231829 - 15231732
Alignment:
Q  298 tggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttta 395  Q
    |||||||||| |||||||| ||| || |||| || | ||||||||||||||||||| ||||||||||| |  | |||||||||||||||  |||||||    
T  15231829 tggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaatcttaaagtttaggatttaaatcgagatttta 15231732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 31424435 - 31424355
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    |||||||||||||| |||| ||||||||| ||||||| ||||||| |||||| |||| ||| |||||||| |||| |||||    
T  31424435 tttactcaactactcttgtggaattgatataagaaatagtaaaattgcaatccaaatcgatagattttacaaaaaaaaaaa 31424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 32424641 - 32424534
Alignment:
Q  19 aaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggat 115  Q
    ||||||| ||||||||||||  ||| ||||||||||||||| ||||||  | ||||||||||| || | | ||||||||||||||||||| ||||| |||    
T  32424641 aaatcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcgat 32424542  T
Q  116 ggatttta 123  Q
     |||||||    
T  32424541 agatttta 32424534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 27836357 - 27836456
Alignment:
Q  87 gaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaat--atgctattaattgtatatagtcatatatgacttaattt 184  Q
    |||||||||||||| |||||||||| ||||||||||||||  | ||||| ||| ||||||  ||| ||| ||| ||||||||||||| |||||||| |||    
T  27836357 gaaattgtaaaatcacaatcaaaatcgatggattttaccagca-aaaaaaaatactaaatacatgttataaatggtatatagtcataaatgacttagttt 27836455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 40541732 - 40541858
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa-taatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaag- 188  Q
    |||||||||||||||||||  | |||||  ||||||||||||| ||||| |||||||  | ||| ||||| ||||||||||| |||||| || || |||     
T  40541732 gtaaaatcgcaatcaaaatcaa-ggattcaaccaaaacaaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactaaagttcaagg 40541830  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    | |||||||||| |||||||||||||||    
T  40541831 tacacaaaatacgtatacataaatgact 40541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 2040336 - 2040282
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  2040336 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatat 2040282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 24414116 - 24414202
Alignment:
Q  26 gactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaa 109  Q
    |||||||||||||  ||||||||||||||||||| ||||||  | ||||||||||| |||| | ||||||||||||||  |||||||    
T  24414116 gactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttgtagaatcgatataggaaattgtaaaatcctaatcaaa 24414202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 22910064 - 22910118
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaa 109  Q
    |||| ||||||| ||||||||||| |||| ||||||| |||||||||||||||||    
T  22910064 tttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaa 22910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 15294805 - 15294768
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15294805 aagaaattgtaaaatcgcaatcaaaatcgatggatttt 15294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 15475174 - 15475137
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15475174 aagaaattgtaaaatcgcaatcaaaatcgatggatttt 15475137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 26879810 - 26879749
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaac-aaaaataatgctaaatat 148  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||| |||||| |||||||||||    
T  26879810 aaatcgtaaaatcgcaatcaaaattgatggattctacaaaaacaaaaaatcatgctaaatat 26879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 15761489 - 15761569
Alignment:
Q  324 ctatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||| || ||||||||||||||| || ||| || |||||||||||| |||||||||||| ||  |||||| || ||||||    
T  15761489 ctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaacaatg 15761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 16752240 - 16752119
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagt 189  Q
    |||| |||||||||||||| || ||||  ||| ||||||||||||||| |||  ||||| ||| ||||| ||||||||||| |||| | || || |||||    
T  16752240 gtaacatcgcaatcaaaatcga-ggatactactaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgagtaaagttcaaagt 16752142  T
Q  190 ccacaaaatacttatacataaat 212  Q
     || ||||||| |||||||||||    
T  16752141 tcataaaatacatatacataaat 16752119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 2040428 - 2040364
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaat 78  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||   |||||||||||||    
T  2040428 caaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaat 2040364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 7262071 - 7262007
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaat 78  Q
    |||||||||||||||||||||  ||||||||||  ||||| |||||||||  |||||||||||||    
T  7262071 caaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaat 7262007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 7489325 - 7489393
Alignment:
Q  312 tttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||| |||||||||| |||| | ||||||||||||||||||||   ||||||| ||| |||||| |||||||    
T  7489325 tttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaa 7489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 9212251 - 9212300
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaat 319  Q
    |||||| ||||||||||| ||||||| ||||||||| | |||||||||||    
T  9212251 gaaatcttaaaatcgcaatcaaaatcgatggatttttcctattttaaaat 9212300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 16752332 - 16752264
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaattgat 82  Q
    |||||| ||||||||||||||  ||| ||||||||||||| |||||||||  | |||||||||||||||    
T  16752332 caaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtagaattgat 16752264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 285
Target Start/End: Original strand, 3573720 - 3573982
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaagga-tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||| ||||||||||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |    
T  3573720 caaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcg 3573819  T
Q  114 atggattttaccaaaacaaaaataatgctaaatatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatg 213  Q
    |||  ||||||||||||||||||||||||||| |        || | |   |  |||| |||||| |  ||||||||||||||||||||| |||||||||    
T  3573820 atgagttttaccaaaacaaaaataatgctaaaaa-------catag-accaaaacataaatgactcagattaaagtccacaaaatacttaaacataaatg 3573911  T
Q  214 actaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaaatcgtaaaatcgc 285  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||| ||| ||||||| ||||||| |||||||||    
T  3573912 actaa-aaaaatggaaaaaattcttcaaaaccctttaacatcatgcaattttgtttgaaatcttaaaatcgc 3573982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 38 - 272
Target Start/End: Original strand, 4841672 - 4841906
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |  | ||||||| ||||||||||||||||||| |||| ||||||||||||||||||     
T  4841672 caatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaaa 4841771  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaat 234  Q
     |||| ||  ||||| ||| |||||  |||||||||| || |||   ||||||||||| |||||  |||||||||||||||||| ||| ||| |||||||    
T  4841772 tatgcaaaatatatgttataaattg--tatagtcataaattactcggtttaaagtccataaaatgtttatacataaatgactaa-aaaaatgcacaaaat 4841868  T
Q  235 tcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
     || ||||||||||||||||| |||||| |||||||||    
T  4841869 cctccaaaaccctttaaaatcatgcgatcttgtatgaa 4841906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 17250190 - 17250057
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||   |||||| ||||||| | |||||||||||||||||||| | ||||||||||||    
T  17250190 gaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctgg 17250091  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    |||||||||||||| || |||||||||| |||||    
T  17250090 attttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 17543736 - 17543872
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||| || ||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||| |||||||||||||     
T  17543736 gaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctga 17543835  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| ||  |||||| || ||||||||    
T  17543836 attttaggatttaagtcgagattttgacaacaatgat 17543872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 23897944 - 23897810
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| |||||||| || ||||||| |||| |||||||||| |||||||||||| ||||||||| |||||||||||||     
T  23897944 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgc 23897845  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || |||| ||| | ||||||    
T  23897844 attttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 30912408 - 30912542
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||   |||||| ||||||| |||||||||||||||||||||| ||||||||||||      
T  30912408 gaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 30912507  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| |  ||||||| || ||||||    
T  30912508 attttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 15528106 - 15528239
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| | ||||| ||||||||||  |||||||| ||||||||||| || | ||||||| |||||||||||| |||||||||||||     
T  15528106 gaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctga 15528205  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    |||||||||||||| || ||||||| || |||||    
T  15528206 attttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 405
Target Start/End: Original strand, 6943464 - 6943591
Alignment:
Q  278 aaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    |||||||||| ||||||| ||| ||||||  |||||| | |||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  378 atttaaatcaggattttaactacaatga 405  Q
    |||||| || ||||||| || |||||||    
T  6943564 atttaagtcgggattttgacaacaatga 6943591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 19748642 - 19748509
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  19748642 caaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 19748543  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||| || || |||||| ||||||||    
T  19748542 atggattttaccagaa-aataataatactaaatat 19748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 185
Target Start/End: Complemental strand, 23898092 - 23897948
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||     
T  23898092 caaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaa-aaaaaaaata 23897995  T
Q  141 ctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  23897994 ctaaatatatgttataaatggtatatagtcataaatgacttagttta 23897948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 26053116 - 26053288
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| |||||||||||||||  ||||||||||||| ||||| ||||||  ||||||||||||| ||||   ||||||||||||||||||||||||| |    
T  26053116 caaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcg 26053215  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| || ||||| ||||    
T  26053216 atggattttaccaaaa-aataataatactaactatatgttataaatggtatatagtcataaataacttagttta 26053288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 26073169 - 26073341
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| |||||||||||||||  ||||||||||||| ||||| ||||||  ||||||||||||| ||||   ||||||||||||||||||||||||| |    
T  26073169 caaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcg 26073268  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||||||| || |||||| ||||  ||||| ||| ||| ||||||||||||| || ||||| ||||    
T  26073269 atggattttaccaaaa-aataataatactaactatatgttataaatggtatatagtcataaataacttagttta 26073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 7918173 - 7918340
Alignment:
Q  20 aatcgggactcgtaaaat--caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatg 116  Q
    |||| |||||||||||||  ||||||||||||||| |||| ||||||  |||||||||||||  ||| | ||||||||||||||||||||||||| ||||    
T  7918173 aatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatg 7918272  T
Q  117 gattttaccaaaacaaaaataatgctaaa--tatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||   ||||||||| |||||  |||| ||| |||  |||||||||||| |||||||||||||    
T  7918273 gattttaccaa---aaaaataatactaaatttatgttataaatgatatatagtcataaatgacttaattta 7918340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 27233273 - 27233386
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||| ||||||||||| ||||||| ||||||||||  ||||||   |||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  27233273 gaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgg 27233372  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  27233373 attttaggatttaa 27233386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 7223824 - 7223649
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||| |||      
T  7223824 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcagaatca 7223725  T
Q  114 atggattttaccaaaacaaaaataatgctaa------atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||||||   |||||||| ||||      ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  7223724 atggattttaccaaa--caaaataatactaaattaatatatgttataaatggtatatagtcataaatgacttagttta 7223649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 17543550 - 17543665
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||| |||||||  ||||||||||||||||||| ||||||  ||||||||||||| ||||   ||||||||||||||||||||||||| |    
T  17543550 caaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcg 17543649  T
Q  114 atggattttaccaaaa 129  Q
    ||||||||||||||||    
T  17543650 atggattttaccaaaa 17543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 270 - 394
Target Start/End: Complemental strand, 19748466 - 19748342
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||| ||||||| |||||||| ||||||||| |||| |||||| || ||||||||||||||| |||||||||||    
T  19748466 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctgg 19748367  T
Q  370 attttaggatttaaatcaggatttt 394  Q
    ||| || ||||||| || |||||||    
T  19748366 attgtaagatttaagtcgggatttt 19748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 11327382 - 11327497
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||| |||||||||||||  |||||||||||||| |||| ||||||  ||||||||||||| |||| | |||||||||||||||||| |||||| |    
T  11327382 caaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcg 11327481  T
Q  114 atggattttaccaaaa 129  Q
    ||||||||||||||||    
T  11327482 atggattttaccaaaa 11327497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 20432500 - 20432633
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa-atatgctattaattgtatatagtcatatatgact--taattt 184  Q
    |||| ||||| ||||||||||||| ||||||||  ||||||||||||||||| |||| ||||| ||| ||||| ||||||||||| || |||   |||||    
T  20432500 aaatcgtaaattcgcaatcaaaatcgatggattccaccaaaacaaaaataatactaatatatgttataaattgcatatagtcataaataactcaaaattt 20432599  T
Q  185 aaagtccacaaaatacttatacataaatgactaa 218  Q
     ||||||||||||||||| |||||||||||||||    
T  20432600 taagtccacaaaatacttttacataaatgactaa 20432633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 22498260 - 22498380
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| |||||||||||||||  ||||||||| ||| ||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  22498260 caaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 22498359  T
Q  114 atggattttaccaaaacaaaa 134  Q
    |||||||||||| ||| ||||    
T  22498360 atggattttacccaaaaaaaa 22498380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 26053292 - 26053425
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||  ||| ||||||  ||||||||||||||||||   |||||| |||| || |||||| ||||||||||||||| |||||||||||| |    
T  26053292 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26053391  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    |||||| ||||||| || ||||||| || |||||    
T  26053392 attttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 403
Target Start/End: Original strand, 26073345 - 26073478
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||  ||| ||||||  ||||||||||||||||||   |||||| |||| || |||||| ||||||||||||||| |||||||||||| |    
T  26073345 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26073444  T
Q  370 attttaggatttaaatcaggattttaactacaat 403  Q
    |||||| ||||||| || ||||||| || |||||    
T  26073445 attttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 404
Target Start/End: Complemental strand, 7223645 - 7223518
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||| | ||       ||||||||||| ||||||||||||      
T  7223645 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaa 7223553  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  7223552 attttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 7918378 - 7918510
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgga 370  Q
    |||||| |||||| ||| ||||||| || |||||||||||| |||  ||| |||||||||| | |||||||||||||||| ||| ||||||||||||| |    
T  7918378 aaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaa 7918477  T
Q  371 ttttaggatttaaatcaggattttaactacaat 403  Q
    |||||| |||||| || ||||||| || |||||    
T  7918478 ttttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 17103504 - 17103393
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||| ||||||||||||||  |||||| | |||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  17103504 caaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 17103405  T
Q  114 atggattttacc 125  Q
    ||||||||||||    
T  17103404 atggattttacc 17103393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 2912093 - 2912191
Alignment:
Q  29 tcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    |||||||||||  ||| |||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| || |||||||||    
T  2912093 tcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 18490538 - 18490664
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtc 190  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||| |||  ||||| ||| ||| |||||||||  || || ||| | | |||||||    
T  18490538 gtaaaatcgcaatcaaaattgatggattctaccaaatcaaaaataatgataaatatatgttataaatcgtatatagtgctaaataactcagtataaagtc 18490637  T
Q  191 cacaaaatacttatacataaatgacta 217  Q
    |||||||||| ||||||||||||||||    
T  18490638 cacaaaatacatatacataaatgacta 18490664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 10508886 - 10508971
Alignment:
Q  63 actacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||  |||||||    
T  10508886 actacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggattttatcaaaataataataataataaatat 10508971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 216
Target Start/End: Original strand, 33592994 - 33593189
Alignment:
Q  38 caatcaaaatcgaaggatttactcaactacttttgtagaattgatacaaga-------------aattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| | ||             |||  |||||||||||||||||| |||||||| |||    
T  33592994 caatcgaaatcgaatgatttactcaactacttttgtagaattgatataggatagcaaaatcaaaaatcataaaatcgcaatcaaaatcgatggattctac 33593093  T
Q  125 caaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaatacttatacataaatgact 216  Q
    ||||| |||||||||| |||  ||||| ||| ||||| ||||||||||   ||||| ||  ||| ||||| |||||||||||||||||||||||||    
T  33593094 caaaagaaaaataatgttaaacatatgttataaattgcatatagtcattattgactcaaagtttcaagtctacaaaatacttatacataaatgact 33593189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15527930 - 15528037
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||| ||||||  ||||||||||||| |||| | |||||||||||||||||||| |||| |    
T  15527930 caaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaatcg 15528029  T
Q  114 atggattt 121  Q
    ||||||||    
T  15528030 atggattt 15528037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 31407531 - 31407397
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tt 183  Q
    |||| |||||||| |||||||| | || | ||| ||||||||||||||||||| |||||||  | ||| ||||| |||| |||||| |||||| ||  ||    
T  31407531 aaatcgtaaaatcacaatcaaagtcgacgcattctaccaaaacaaaaataatgttaaatatatgttataaattgcatattgtcataaatgactcaaagtt 31407432  T
Q  184 taaagtccacaaaatacttatacataaatgactaa 218  Q
    |||| ||||||||||||||||||||||||||||||    
T  31407431 taaattccacaaaatacttatacataaatgactaa 31407397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 2912245 - 2912367
Alignment:
Q  271 aaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgga 370  Q
    |||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||||| ||| ||| ||||||||| || ||||| | ||||||||||  |    
T  2912245 aaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttgaagatggagaaagttgcaaaatcctaaa 2912343  T
Q  371 ttttaggatttaaatcaggatttt 394  Q
    ||||| ||||||| || |||||||    
T  2912344 ttttaagatttaagtcgggatttt 2912367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 381
Target Start/End: Original strand, 22498881 - 22498992
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||| ||||  |||||| ||||||||||  |||||| | ||| |||||||||| ||||||||| |||||||||||| |||||||||  |||    
T  22498881 gaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaagaaagtcgcaaaattgtgg 22498980  T
Q  370 attttaggattt 381  Q
    | ||||||||||    
T  22498981 aatttaggattt 22498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 11327567 - 11327701
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||| |||||||||||||  |||||| ||| ||||||| ||||||   |||||||||||||| | |||| |||||| ||||||||| ||||||| | |||    
T  11327567 gaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttgg 11327666  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||| ||||| || ||||||| || ||||||    
T  11327667 attttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 27890603 - 27890480
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||||| |||| ||||  || ||||    
T  27890603 gtaaaatcgcaatcaaaatcga-gaattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgagttaaagttcaaag 27890505  T
Q  189 tccacaaaatacttatacataaatg 213  Q
    |||||||||||| |||| |||||||    
T  27890504 tccacaaaatacatatatataaatg 27890480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 5422564 - 5422665
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtc 190  Q
    ||||||||||||||||||      ||||||||||||||||||||||||||||  ||||| ||| |||| |||||||||||| |||||  |||||||||||    
T  5422564 gtaaaatcgcaatcaaaa------gattttaccaaaacaaaaataatgctaaatatatgttataaattatatatagtcataaatgac-caatttaaagtc 5422656  T
Q  191 cacaaaata 199  Q
    |||||||||    
T  5422657 cacaaaata 5422665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 20399994 - 20400099
Alignment:
Q  102 caatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaa 197  Q
    |||||||||| ||||||||  |||||||||||||||||| |||  ||||| ||| ||||| ||||||||||| || ||| ||  ||||||||||||||||    
T  20399994 caatcaaaatcgatggattccaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataaataactcaatgtttaaagtccacaaaa 20400093  T
Q  198 tactta 203  Q
    ||||||    
T  20400094 tactta 20400099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 27233119 - 27233252
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||| |||||||  ||||||||| ||||||||| ||||||   |||| ||||||| | || |  |||||||||||||||||||||||| |    
T  27233119 caaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtctttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcg 27233218  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    || |||||||||| || || |||||| ||||||||    
T  27233219 atagattttaccataa-aacaataatactaaatat 27233252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 17103328 - 17103199
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||||   ||||||||||| || |||||||||||| |||       |||||||||||||     
T  17103328 gaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagtg-------tcgcaaaatcctga 17103236  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||| ||||||| || ||||||| || ||||||||    
T  17103235 attttaagatttaagtcgggattttgacaacaatgat 17103199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 10509023 - 10509143
Alignment:
Q  274 tcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattt 373  Q
    ||||||||||| || ||||||| ||| ||||||| ||||||   ||||||||||  || |||||| ||||| ||||||||| || |||| | ||| ||||    
T  10509023 tcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattt 10509122  T
Q  374 taggatttaaatcaggatttt 394  Q
    |||||||||| || |||||||    
T  10509123 taggatttaagtctggatttt 10509143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 18491081 - 18491157
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    ||||| |||||||| |||||||||||||||||| |||   ||||||| |||||||||||||||||| || |||||||    
T  18491081 attctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggatttt 18491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 3573984 - 3574041
Alignment:
Q  326 atggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaa 383  Q
    |||||| |||||||||||||||||||||| |||| |||| ||||||||||| ||||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaa 3574041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 18490783 - 18490854
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaat 254  Q
    |||||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| ||||||||  |||||||||    
T  18490783 tttaaagttcacaaaatacttgtacataaatgactaa-aaaaatggataaaatccttcaaaattctttaaaat 18490854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 30912248 - 30912336
Alignment:
Q  37 tcaatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    |||| |||||| ||||||||| | ||||||||||||||| ||| |||| |||||||  || ||||||||||| ||| ||||||||||||    
T  30912248 tcaaccaaaattgaaggattttattcaactacttttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttac 30912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 31108377 - 31108252
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaat--atgctattaattgtatatagtcatatatgacttaa--tt 183  Q
    |||| ||||||||||||||||||| || ||||| || |||||||||| ||| |||||||  ||| ||| |||||   ||||||||| |||||||||  ||    
T  31108377 aaatcgtaaaatcgcaatcaaaatcga-ggattctaacaaaacaaaagtaaagctaaatacatgttataaattg--catagtcataaatgacttaaagtt 31108281  T
Q  184 taaagtccacaaaatacttatacataaat 212  Q
     ||||||| |||||||| |||||||||||    
T  31108280 caaagtccgcaaaatacatatacataaat 31108252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 5422798 - 5422878
Alignment:
Q  324 ctatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    |||| ||| |||||||||||||||||| ||| | |||||||| || ||||||| |||||| || ||||||| || ||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatg 5422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 21354873 - 21354789
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaa 354  Q
    ||||||||||||||||||  |||| | ||||||||||  ||||||   ||||||| |||||| | ||||||||||||| ||||||    
T  21354873 gaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaa 21354789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 4841963 - 4842027
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaa 384  Q
    ||||| ||| |||| |||||||||||||||||| ||| |||||||||||   |||||||||||||||    
T  4841963 attctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaaa 4842027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 404
Target Start/End: Complemental strand, 12245171 - 12245108
Alignment:
Q  341 tgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    |||| ||||| ||| ||||||||| ||| |||||| ||||||||||| ||||||||| ||||||    
T  12245171 tgaaagtgaataaagtcgcaaaatactgaattttaagatttaaatcatgattttaacaacaatg 12245108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 18491005 - 18491063
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttag 376  Q
    ||||| |||||||| |||||| ||||||||||| ||| | ||||||| |||||||||||    
T  18491005 attctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 27614477 - 27614518
Alignment:
Q  18 aaaatcgggactcgtaaaat--caatcaaaatcgaaggattt 57  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  27614477 aaaatcgggactcgtaaaatcacaatcaaaatcgaaggattt 27614518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 28669454 - 28669420
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgact 216  Q
    |||||| ||||||||||||||||||||||||||||    
T  28669454 tttaaattccacaaaatacttatacataaatgact 28669420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 4596761 - 4596843
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaa---caaaaataatgctaaat--atgctattaattgtatata 165  Q
    |||| ||||||||||||| ||||| | |||||| ||||||||   |||||||||||||||||  ||| ||||||||| |||||    
T  4596761 aaatcgtaaaatcgcaataaaaatcggtggattctaccaaaacagcaaaaataatgctaaatacatgttattaattgcatata 4596843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 7223647 - 7223610
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  7223647 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 7223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 17250291 - 17250250
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  17250291 aaattgtaaattcgcaatcaaaatcaatggattttaccaaaa 17250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 7857125 - 7857097
Alignment:
Q  188 gtccacaaaatacttatacataaatgact 216  Q
    |||||||||||||||||||||||||||||    
T  7857125 gtccacaaaatacttatacataaatgact 7857097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 23897946 - 23897910
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattt 121  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  23897946 aagaaatcgtaaaatcgcaatcaaaatcgatggattt 23897910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 38 - 272
Target Start/End: Original strand, 43005702 - 43005940
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||| ||| ||||| |||||||| |||||||||||| |||| | ||||| ||||||||||||| ||||| |||||||| |||||||||||||||    
T  43005702 caatcaaaattgaaagattttactcaacttcttttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtaccaaaacaaaaat 43005801  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgacttaatttaaagtccac-aaaatacttatacataaatgactaacaaagatggacaaaa 233  Q
    ||||||||  ||||| ||| ||||||||| | ||||| || ||| |  ||||| | ||| |||||||||| | |||||||||||| ||| ||| ||||||    
T  43005802 aatgctaaatatatgttataaattgtatacactcataaatcactcagattaaatttcacaaaaatacttaaatataaatgactaaaaaaaatgaacaaaa 43005901  T
Q  234 ttcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    | ||||||||||||| |||||| ||||||||||||||||    
T  43005902 tccttcaaaacccttaaaaatcctgcgattttgtatgaa 43005940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 24648306 - 24648095
Alignment:
Q  29 tcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttacc 125  Q
    ||||||||||  |||||||||| |||||||| |||||||||||||||||||||  ||| ||        ||||||||||||||||| | ||||||||||     
T  24648306 tcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataa--------aaaatcgcaatcaaaatcggtggattttact 24648215  T
Q  126 aaaacaaaaataatgctaaatatgc--tattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaacaaag 223  Q
    |||||| ||||||||||||||||    ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |     
T  24648214 aaaacataaataatgctaaatatatattataaattgtatatagtcataaatgactcaatttaaagtccacaaaatacttatacataaatgactaaaataa 24648115  T
Q  224 atggacaaaattcttcaaaa 243  Q
    ||||||||||| ||||||||    
T  24648114 atggacaaaatccttcaaaa 24648095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 19579075 - 19578962
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||   |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19579075 gaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctgg 19578976  T
Q  370 attttaggatttaa 383  Q
    |||||| |||||||    
T  19578975 attttatgatttaa 19578962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 18051526 - 18051662
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||| |||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||||||      
T  18051526 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctat 18051625  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| || ||||||| || ||||||||    
T  18051626 attttaggatttaagtcgggattttgacaacaatgat 18051662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 270 - 383
Target Start/End: Complemental strand, 43235001 - 43234888
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||| ||| ||||||| ||||||||| | |||||||  |||||||||||||| | |||||||||||||||||||| |||||||||||||     
T  43235001 gaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctga 43234902  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  43234901 attttaggatttaa 43234888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 19579252 - 19579079
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| ||||||| |||||||  ||||||||||||||||||| ||||||  ||||||||||||| | || |  |||||||||||||||||||||||| |    
T  19579252 caaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcg 19579153  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||||||| ||||||||| | ||  ||||| ||| ||| ||| ||||||||| |||||||| ||||    
T  19579152 atggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagttta 19579079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 21059152 - 21059285
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||    ||||||| |||||| |||||||||||| ||||||||| |||||||||||| |    
T  21059152 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctag 21059250  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||||||||||||| ||||||| || ||||||    
T  21059251 attttaggatttaaatcgggattttgacaacaatg 21059285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 278 - 403
Target Start/End: Complemental strand, 20923843 - 20923718
Alignment:
Q  278 aaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttagg 377  Q
    |||||||||| ||||||| ||||| ||||| |||||||  |||||||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  378 atttaaatcaggattttaactacaat 403  Q
    |||||| || ||||||| || |||||    
T  20923743 atttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 18844024 - 18843852
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||||||||||||||||  ||||||||||| || |||| ||||||  |||||||||||||  ||| | ||||||||||||||||||||||||| |    
T  18844024 caaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcg 18843925  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||||||||||| ||| |||| |||| ||||  ||||| ||| ||| ||||||| ||||| |||||||| ||||    
T  18843924 atggattttacccaaa-aaaattaatactaaatatatgttataaatggtatataatcataaatgacttagttta 18843852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 41688661 - 41688773
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||| |||| ||||||  || | |||||||||||||||||||||| ||||||||| |     
T  41688661 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-ga 41688759  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  41688760 attttaggatttaa 41688773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 22645715 - 22645849
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||| |||||||||||| ||||||  ||||| ||| ||||||||   ||| |||||||||| | | |||||||||||||||||| ||||||||| ||||    
T  22645715 gaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactgg 22645814  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  22645815 attttaggatttaagtcgggattttgacaacaatg 22645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 41427728 - 41427510
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaaga-------------aattgtaaaatc 100  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||| |  ||||||||||||| |||| | ||             |||||||||||     
T  41427728 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggacttttgtagaatcgatataggatagcaaaatagggaattgtaaaatt 41427629  T
Q  101 gcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatatgc--tattaattgtatatagtcatatatgacttaa--tttaaagtccacaaa 196  Q
    ||||||||||| || ||||| ||||||||||||||||||| |||||||    ||| ||||| ||||||||||| |||||||||  || ||||||||||||    
T  41427628 gcaatcaaaatcga-ggattctaccaaaacaaaaataatgataaatatatattataaattgcatatagtcataaatgacttaaagttcaaagtccacaaa 41427530  T
Q  197 atacttatacataaatgact 216  Q
    |||| |||||||||||||||    
T  41427529 atacatatacataaatgact 41427510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 402
Target Start/End: Complemental strand, 18843848 - 18843716
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||| ||| |||| ||||||| ||| ||||||  ||||||   ||||||| |||||| |||||||||||||||||||||| |||||||||||||     
T  18843848 gaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 18843749  T
Q  370 attttaggatttaaatcaggattttaactacaa 402  Q
    ||| |||||||||| || | |||||||| ||||    
T  18843748 attataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 38158111 - 38158216
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    |||||||||||||||| ||||||||| |||||||||||  ||  |||||||||||||||| |||||||||| ||||||||||||||||  |||||||||     
T  38158111 caaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttaccaaa--aaaaataata 38158208  T
Q  141 ctaaatat 148  Q
    ||||||||    
T  38158209 ctaaatat 38158216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 41688486 - 41688618
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||||||||| |||||||  || |||||||||||||||| ||| ||  ||||||||||||| |||| |  |||||||||||||||||||||||| |    
T  41688486 caaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcg 41688585  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||| |||||||||||  ||||||||| ||||||||    
T  41688586 atgaattttaccaaa--aaaaataatactaaatat 41688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 43235154 - 43235062
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  43235154 caatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttaccaaaa 43235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 26021605 - 26021464
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||| ||||||| |||||||||||| ||||  || |||| ||||||| |||||||| |||| |||   |||| ||||||||||||||| |||    
T  26021605 caatcaaaatcgtaggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaattaaac--gatgcattttaccaaaacaataat 26021508  T
Q  137 aatgctaa--atatgctattaattgtatatagtcatatatgact 178  Q
    ||||||||  ||||| ||| ||||||||||||||||| ||||||    
T  26021507 aatgctaaatatatgttataaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 277 - 394
Target Start/End: Original strand, 27340189 - 27340306
Alignment:
Q  277 taaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttag 376  Q
    ||||||| ||| ||||||| ||| ||||||| |||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||||| |  ||||||     
T  27340189 taaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttat 27340288  T
Q  377 gatttaaatcaggatttt 394  Q
    ||||||| || |||||||    
T  27340289 gatttaagtcgggatttt 27340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 38158250 - 38158363
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||  ||| ||||||||||||||||||  ||||||   |||||||| ||||| ||||| |||||| || |||||| |||||||||||| |    
T  38158250 gaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctag 38158349  T
Q  370 attttaggatttaa 383  Q
    ||||||||||||||    
T  38158350 attttaggatttaa 38158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 20321251 - 20321141
Alignment:
Q  18 aaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgga 114  Q
    ||||||||||||| |||||||  ||||||||| ||||||||| ||| ||  |||||||||||||  ||| | ||||||||||||||||||||||||| ||    
T  20321251 aaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggacttttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcga 20321152  T
Q  115 tggattttacc 125  Q
    |||||||||||    
T  20321151 tggattttacc 20321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 23172272 - 23172420
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    |||||||||||||| |||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||||| ||| |||| ||    
T  23172272 aatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaa-aaaatta 23172370  T
Q  138 atgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||  |||  ||||| ||  ||| ||||||||||||| |||||||| ||||    
T  23172371 atattaaatatatgttacaaatggtatatagtcataaatgacttagttta 23172420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 21059018 - 21059087
Alignment:
Q  55 tttactcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    |||||| |||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||    
T  21059018 tttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttac 21059087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 27340030 - 27340122
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaa 129  Q
    |||||||||||||||||||| |||||   |||||||||||||||||| |||||||  |||||||||||||||||| ||| |||||||| ||||    
T  27340030 caatcaaaatcgaaggattttactcacggacttttgtagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaa 27340122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 15051917 - 15052081
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaat-tgata-caa-----gaaattgtaaaatcgcaatc 106  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||  |||||||||||||  |||| |||     ||| | ||||||||||||||    
T  15051917 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaataggatagcaaagtcggaactcgtaaaatcgcaatc 15052016  T
Q  107 aaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcat 170  Q
    ||||| || ||||| ||||||||||||||||||| |||  ||||| ||| ||||| ||||||||||    
T  15052017 aaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 15052081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 19377808 - 19377704
Alignment:
Q  116 ggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaatacttatacataaa 211  Q
    ||||| ||| ||||||||||||||| |||||||  | ||| ||||| ||||||||||| |||||||||  || |||||||||||||||| ||||||||||    
T  19377808 ggattctacaaaaacaaaaataatgttaaatatatgttataaattggatatagtcataaatgacttaaagttcaaagtccacaaaatacatatacataaa 19377709  T
Q  212 tgact 216  Q
    |||||    
T  19377708 tgact 19377704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 216
Target Start/End: Complemental strand, 30799682 - 30799497
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaaga-----aattgtaaaatcgcaatcaaaatggatggattttaccaaaacaa 132  Q
    |||| |||||||||||||| || |||||||||||||||||| |||| | ||     || |  ||||||||||||||||| |||||||| ||| |||   |    
T  30799682 aatcgaaatcgaaggattttacacaactacttttgtagaatcgatatatgatagaaaaatcgaaaatcgcaatcaaaatcgatggattgtacaaaattca 30799583  T
Q  133 aaataatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgact 216  Q
    ||| ||||||||||||  | ||| |||| | ||| |||||| |||||||| ||| |||| || |||||||||||||||||||||||    
T  30799582 aaacaatgctaaatatttgttataaattatgtatggtcataaatgacttagtttcaagttcataaaatacttatacataaatgact 30799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 15446429 - 15446302
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    ||||||||||||||||||| |||||||| || |||||||||||||| | |||||||  | ||| ||||| | | | ||||| |||||| ||  |||||||    
T  15446429 gtaaaatcgcaatcaaaatcgatggattctatcaaaacaaaaataacgataaatatatgttatcaattgcacacactcataaatgactcaaagtttaaag 15446330  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    |||||||| ||||| |||||||||||||    
T  15446329 tccacaaattacttgtacataaatgact 15446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 23172476 - 23172552
Alignment:
Q  318 attctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    |||||||||||||| | ||||||||||| |||||||| ||||||||||||  |||||||||||||| || |||||||    
T  23172476 attctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggatttt 23172552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 30804158 - 30804032
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaata--tgctattaattgtatatagtcatatatgacttaattta 185  Q
    |||| ||||||||||||| |||||   || ||| ||||||||||||||||||||||||||  |  ||| ||||  ||||||||||| |||||| | |||     
T  30804158 aaatggtaaaatcgcaatgaaaatcattgaattgtaccaaaacaaaaataatgctaaatatttattatgaattacatatagtcataaatgactcagtttc 30804059  T
Q  186 aagtccacaaaatacttatacataaat 212  Q
    || || |||||||||||||||||||||    
T  30804058 aattctacaaaatacttatacataaat 30804032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 18051405 - 18051486
Alignment:
Q  66 acttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||| |||| | |||||||||||||||||| |||||| ||||||||| ||||||| || |||||| ||||||||    
T  18051405 acttttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaaccaaaa-aataataatactaaatat 18051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 19042248 - 19042356
Alignment:
Q  17 caaaatcgggactcgtaaaatca--atcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||| ||||||||||||||||  || |||||||||| |||| ||| ||  ||||||||||||| |||| | |||||||||||||||||||| |||| |    
T  19042248 caaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatc-aaattg 19042346  T
Q  114 atggatttta 123  Q
    ||||||||||    
T  19042347 atggatttta 19042356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 9996880 - 9996937
Alignment:
Q  91 ttgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||    
T  9996880 ttgtaaaattacaatcaaaatcgatggattttaccaaaacaaaaataatgcttaatat 9996937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 19979732 - 19979648
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaa 354  Q
    |||||||||||||||||| ||||||| ||||||||||| | ||||   ||||||| ||| || ||||||||||||| ||||||||    
T  19979732 gaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 22984713 - 22984839
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    |||||||  |||||||||| || ||||| |||||| |  |||||||||||||||||  | ||| ||||| ||||||||||| |||||| ||  || |||     
T  22984713 gtaaaattccaatcaaaatcga-ggattctaccaatagtaaaataatgctaaatatatgttataaattgcatatagtcatagatgactcaaagttcaaat 22984811  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    |||||||||||| |||||||||||||||    
T  22984812 tccacaaaatacatatacataaatgact 22984839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 24106711 - 24106650
Alignment:
Q  333 tgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggatttt 394  Q
    ||||||||||  |||||||||| | ||||||||||| |||||| ||||||||||||||||||    
T  24106711 tgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggatttt 24106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 26021453 - 26021408
Alignment:
Q  225 tggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatg 270  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||    
T  26021453 tggacaaaatccttcaaaaccctttaaaatcctgcgattttgtatg 26021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 13349509 - 13349558
Alignment:
Q  167 tcatatatgacttaatttaaagtccacaaaatacttatacataaatgact 216  Q
    ||||| |||||| | ||| |||||||||||||||||||||||||||||||    
T  13349509 tcataaatgactcagtttgaagtccacaaaatacttatacataaatgact 13349558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 22645614 - 22645662
Alignment:
Q  87 gaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    |||||||||||||| |||||||||| |||| |||||||||||| |||||    
T  22645614 gaaattgtaaaatcacaatcaaaatcgatgaattttaccaaaaaaaaaa 22645662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 19979848 - 19979790
Alignment:
Q  80 gatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataat 139  Q
    |||| |||||||||||||| | |||||||||| ||||||||||||||||| || ||||||    
T  19979848 gatataagaaattgtaaaa-cacaatcaaaatcgatggattttaccaaaataataataat 19979790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 22645713 - 22645752
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattttac 124  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  22645713 aagaaattgtaaaatcgcaatcaaaatagatggaatttac 22645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 187812 - 187909
Alignment:
Q  122 taccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa-tttaaagtccacaaaatacttatacataaatgact 216  Q
    ||||||||||||||||||| |||  ||||| ||| ||||| ||||||| ||| || ||| || ||  ||||||||||||||  |||||||||||||||    
T  187812 taccaaaacaaaaataatgttaaatatatgttataaattgcatatagtaataaataactaaagttcgaagtccacaaaatatatatacataaatgact 187909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 20321074 - 20320988
Alignment:
Q  272 aatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcg 358  Q
    |||||||||||||||| |||| |  ||| |||||   ||||||  |||| |||||||||| | |||| |||||||||||||||||||    
T  20321074 aatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaagaaaatcg 20320988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 29270295 - 29270235
Alignment:
Q  155 aattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgact 216  Q
    ||||| ||||||||||| || ||| ||  ||||||| |||||||||||||||||||||||||    
T  29270295 aattgcatatagtcataaattactcaaagtaaagtc-acaaaatacttatacataaatgact 29270235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 8576 - 8440
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   ||||||| || ||| | |||||||||||||||||||| |||||||||| |||    
T  8576 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtgg 8477  T
Q  370 attttaggatttaaatcaggattttaactacaatgat 406  Q
    |||||||||||||| |  ||||||| || ||||||||    
T  8476 attttaggatttaagtagggattttgacaacaatgat 8440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 8750 - 8580
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||| |||||| || ||| ||||||| |||| | ||||||||||||||||||||||||| |    
T  8750 caaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 8651  T
Q  114 atggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaattta 185  Q
    ||||||||||||||   ||||||||| ||||  ||||| ||| ||| ||||||||||||| |||||||| ||||    
T  8650 atggattttaccaa---aaaaataatactaaatatatggtataaatggtatatagtcataaatgacttagttta 8580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 956 - 785
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaac-aaaaa 135  Q
    ||||||||||||||| |||| ||||||||||||||||||||  |||| |||||||||||||||||||||||      ||||||||||||||||| |||||    
T  956 caatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatca------atggattttaccaaaacaaaaaa 863  T
Q  136 taatgctaaatatgctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaatgactaa 218  Q
     |||||||||     ||| ||||||||||||||||  ||| |||| |||||||| ||||||||||| ||| ||||||||||||    
T  862 aaatgctaaa-----tataaattgtatatagtcattaatggcttagtttaaagttcacaaaatactcatagataaatgactaa 785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 93702 - 93834
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    |||||||||||||||||| ||||||| |||||||| || ||||||| |||||| |||||||| ||||| ||||| ||||||||||||  |||||| ||||    
T  93702 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctgg 93799  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    |||||||||||||| || ||||||| || ||||||    
T  93800 attttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 93549 - 93700
Alignment:
Q  39 aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaata 137  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||||||||||||||| ||||||||||||||||| | |||||    
T  93549 aatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaa-acaaata 93647  T
Q  138 atgctaa--atatgctattaattgtata-tagtcatatatgacttaatttaaa 187  Q
     | ||||  ||||| ||| ||| ||||| |||||||| | |||||||||||||    
T  93648 ttactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaa 93700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 93700 - 93736
Alignment:
Q  85 aagaaattgtaaaatcgcaatcaaaatggatggattt 121  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  93700 aagaaatcgtaaaatcgcaatcaaaatcgatggattt 93736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 96 - 231
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggatttt-gcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctg 368  Q
    ||||| |||||||| ||| ||||||| ||||||||| || ||||||| |||| |||||||||| |||||||||||| ||||||||| |||||||||||||    
T  96 gaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctg 195  T
Q  369 gattttaggatttaaatcaggattttaactacaatg 404  Q
     |||||||||||||| || |||| ||| | ||||||    
T  196 cattttaggatttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 51 - 131
Alignment:
Q  42 caaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggatttt 122  Q
    |||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||| |||||||||| ||||||||||    
T  51 caaaatcgaaggattttactcaactacttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 56268 - 56379
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||||| | |||||     
T  56268 caatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaacaaaaaaaa 56367  T
Q  137 aatgctaaatat 148  Q
    ||| ||||||||    
T  56368 aatactaaatat 56379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 5e-26; HSPs: 5)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 48504 - 48616
Alignment:
Q  37 tcaatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaa 135  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||| ||||| | |||||||||| |||||||| |||||| |||| | |||||||||    
T  48504 tcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggactttatccaaacaaaaa 48603  T
Q  136 taatgctaaatat 148  Q
    ||||| |||||||    
T  48604 taatgttaaatat 48616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 61157 - 61268
Alignment:
Q  38 caatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaat 136  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| |||| | ||||| ||||||||| || |||||| |||||| ||||  |||||||||||    
T  61157 caatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggactttattaaaacaaaaat 61256  T
Q  137 aatgctaaatat 148  Q
    |||| |||||||    
T  61257 aatgttaaatat 61268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 48687 - 48776
Alignment:
Q  182 tttaaagtccacaaaatacttatacataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    |||||||||||||||||| |||||||||||||||| | ||| ||| ||||||| ||||||||||| |||||||| |||| |||||||||||    
T  48687 tttaaagtccacaaaataattatacataaatgact-agaaaaatgaacaaaatccttcaaaacccattaaaatcatgcggttttgtatgaa 48776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 48839 - 48918
Alignment:
Q  325 tatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||| |||||||||||||||||| ||| | ||||||| || ||||||||||||||| || | ||||| || ||||||    
T  48839 tatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 61304 - 61370
Alignment:
Q  205 acataaatgactaacaaagatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 272  Q
    |||||||||||||  ||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||    
T  61304 acataaatgactagaaaa-atggacaaaatccttcaaaacccattaaaatcctgcggttttgtatgaa 61370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 7275 - 7408
Alignment:
Q  17 caaaatcgggactcgtaaaatc--aatcaaaatcgaaggattt-actcaactacttttgtagaattgatacaagaaattgtaaaatcgcaatcaaaatgg 113  Q
    |||||||| |||| ||||||||  ||||||||||||||||||| |||||| ||||||||| |||| |||| | ||||||||| ||||||||||||||| |    
T  7275 caaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatcaaaatcg 7374  T
Q  114 atggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||| |||||||||||| || |||||| ||||||||    
T  7375 atgaattttaccaaaa-aacaataatactaaatat 7408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 7451 - 7585
Alignment:
Q  270 gaaatcgtaaaatcgcaaacaaaatcaatggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctgg 369  Q
    ||||||||||||||||||  |||||| ||| ||||||| |||||||  |||||||||||||| |   ||||||||||| |||||| |||||||||||||     
T  7451 gaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctga 7550  T
Q  370 attttaggatttaaatcaggattttaactacaatg 404  Q
    ||||||| |||||| || ||||| |||| ||||||    
T  7551 attttagaatttaagtcgggattctaacaacaatg 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 552 - 426
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaa--atatgctattaattgtatatagtcatatatgacttaa--tttaaag 188  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||||| |||||| ||  || ||||    
T  552 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgatataaattgcatatagtcataaatgactcaaagttcaaag 454  T
Q  189 tccacaaaatacttatacataaatgact 216  Q
    | |||||||| | |||||||||||||||    
T  453 tgcacaaaatgcatatacataaatgact 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 34909 - 35014
Alignment:
Q  114 atggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaatttaaagtccacaaaatacttatacataaa 211  Q
    ||||||||||| |||||||||||||||||| ||||  | |||  ||| || ||| ||||| ||| || | |||||||||||||||||| |||||||||||    
T  34909 atggattttacaaaaacaaaaataatgctacatatatgttatatattatacataatcataaatggctcagtttaaagtccacaaaatatttatacataaa 35008  T
Q  212 tgacta 217  Q
    ||||||    
T  35009 tgacta 35014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 133027 - 133149
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt-aaagt 189  Q
    |||||||||||||||||||  | ||||| ||| ||||||||| ||||| |||||||  | ||| ||||| ||||||||||| |||||  || || |||||    
T  133027 gtaaaatcgcaatcaaaatcaa-ggattctactaaaacaaaattaatgttaaatatatgttataaattgcatatagtcataaatgaccaaagttcaaagt 133125  T
Q  190 ccacaaaatacttatacataaatg 213  Q
    ||||||||||| ||||||||||||    
T  133126 ccacaaaatacatatacataaatg 133149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 38475 - 38565
Alignment:
Q  126 aaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaa--tttaaagtccacaaaatacttatacataaat 212  Q
    ||||||||||||||| |||||||  | ||| ||||||||||||||||| | |||||||  || |||||||||||||||| |||||||||||    
T  38475 aaaacaaaaataatgataaatatatgttataaattgtatatagtcataaaggacttaaagttcaaagtccacaaaatacatatacataaat 38565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 5124 - 5249
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat--gctattaattgtatatagtcatatatgacttaattt-aaagt 189  Q
    ||||||||||||||||||| || ||||| |||||||  ||||||||||||||||||  | ||| ||||| || |||||||| ||||   || || |||||    
T  5124 gtaaaatcgcaatcaaaatcga-ggattctaccaaatgaaaaataatgctaaatatatgttataaattgcatgtagtcataaatgatcaaagttcaaagt 5222  T
Q  190 ccacaaaatacttatacataaatgact 216  Q
    ||||||||||| | |||||||||||||    
T  5223 ccacaaaatacatgtacataaatgact 5249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 404
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  299 ggattttgcttattttaaaattctactatggatctgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaaatcaggattttaact 398  Q
    ||||||| | |||||||| ||||| |||||||| ||||| |||||||||||| ||||| ||||||| ||| ||||||  |||||| || | ||||| ||     
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  399 acaatg 404  Q
    ||||||    
T  37291 acaatg 37296  T

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Target: scaffold0259 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 18619 - 18559
Alignment:
Q  88 aaattgtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    |||| ||||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||    
T  18619 aaatcgtaaaattgcaatcaaaatagatggattctatcaaaacaaaaataatactaaatat 18559  T

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Target: scaffold0526 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 8373 - 8288
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat-gctattaattgtatatagtcatatatgact 178  Q
    ||||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||   ||| ||||| ||||||||||| ||||||    
T  8373 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaatataatactaaatatatgtataaattgcatatagtcataaatgact 8288  T

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Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 14746 - 14810
Alignment:
Q  17 caaaatcgggactcgtaaaat--caatcaaaatcgaagga-tttactcaactacttttgtagaat 78  Q
    |||||||||||||||||||||  ||||||||||||||||| |||| ||||  |||||||||||||    
T  14746 caaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtagaat 14810  T

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Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 14838 - 14884
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatg 140  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  14838 gtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatg 14884  T

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Target: scaffold0163 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 2994 - 2940
Alignment:
Q  93 gtaaaatcgcaatcaaaatggatggattttaccaaaacaaaaataatgctaaatat 148  Q
    ||||||||||||||||||| || ||||| |||||||  ||||||||||||||||||    
T  2994 gtaaaatcgcaatcaaaatcga-ggattctaccaaatgaaaaataatgctaaatat 2940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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