View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9303_low_108 (Length: 242)
Name: NF9303_low_108
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_low_108 |
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Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 44155279 - 44155068
Alignment:
| Q |
1 |
catataagcctgcatcactcgattctctacaatcacttcattcatttttagtgttaattacaacatgacttgtagcacaagattcgatagaattaatatt |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44155279 |
catagaagcctgcatcactcgattctctacaatcacttcattcatttttagtgttaatctcaacatgacttgtagcacaagattcgatagaattaatatt |
44155180 |
T |
|
| Q |
101 |
aacgctcatgcctgtatgcatatttaaatgagagaatcaaagaacctccaaattaattcacacgggtaaggaattcaacggagctctgacaataagtcac |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||| |||| |||||||||||| |
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| T |
44155179 |
aacactcatgcctgtatgcatatttaaatgagagaatcaaagaaacaccaaattaattcacaagtgtaaggaattcaacggatctctcacaataagtcac |
44155080 |
T |
|
| Q |
201 |
gaagaagaatga |
212 |
Q |
| |
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|||||||||||| |
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|
| T |
44155079 |
gaagaagaatga |
44155068 |
T |
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