View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9303_low_118 (Length: 240)
Name: NF9303_low_118
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_low_118 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 35030863 - 35031091
Alignment:
| Q |
1 |
tcaaagaatacgaatttcttttattcatgcttgattaaaaatattccactaacataaagggtcctaattggagtatttcacctttccctaatgttttgag |
100 |
Q |
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| T |
35030863 |
tcaaagaatacgaatttcttttattcatgcttgattaaaaatattccactaacataaagggtcctaattggagtatttcacctttccctaatgttttgag |
35030962 |
T |
|
| Q |
101 |
catatataccatcttttataatggccggaaaagagtttgctaaaggttggtaatatatattctcatacatggttcacagaatattttgctttttaaattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35030963 |
catatataccatcttttataatggccggaaaagagtttgctaaaggtaggtaatatatattctcatacatggttcacagaatattttgc-ttttaaattc |
35031061 |
T |
|
| Q |
201 |
aggtaaaggcctaaacacacaatagaatta |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
35031062 |
aggtaaaggcctaaacacacaatagaatta |
35031091 |
T |
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