View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9303_low_43 (Length: 356)
Name: NF9303_low_43
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 35830717 - 35831041
Alignment:
| Q |
18 |
tctctaatatgacagaacagaaaaaagttctcaacagnnnnnnnnttatgacataatccgtgacattttacaggtgaaatggattagggtgctctattca |
117 |
Q |
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| T |
35830717 |
tctctaatatgacagaacagaaaaaagttctcaacagtaaaaaatttaagacataatctgtgacattttacaggtgaaatggattagggtgctctattca |
35830816 |
T |
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| Q |
118 |
gatttctctaaatttacaagggatcaagagtacttgatatcacttaaggacaaaattgattatattgaaggatttgtaatcataaatagaactggcatcc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35830817 |
gatttctctaaatttacaagggatcaagagtacttgatatcacttaaggacaaaattgattatattgaaggatttgtaatcataaatagaactggcatcc |
35830916 |
T |
|
| Q |
218 |
ttaatggttggagattatcttttgaccccaaagaccctcttcaagccagccaattcaattcagatggaaagactttctactgtcttgagatggcaaaata |
317 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35830917 |
ttaacggttggagattatcttttgaccccaaagaccctcttcaagccagccaattcaattcagatggaaagactttctactgtcttgagatggcaaaata |
35831016 |
T |
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| Q |
318 |
cttcaaccctgatgaagctgatgtc |
342 |
Q |
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||||||||||||||||||||||||| |
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| T |
35831017 |
cttcaaccctgatgaagctgatgtc |
35831041 |
T |
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