View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9303_low_46 (Length: 352)
Name: NF9303_low_46
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_low_46 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 37)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 10580429 - 10580093
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580429 |
agcactcttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
10580330 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580329 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
10580230 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10580229 |
tgagcaagtcctcagcatcaatgatagcatctttcaagtcatcaagccatagtttgacagcaggattattgatctgcttctcctctgcatcatccagcac |
10580130 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10580129 |
aacttgaagagtgagcagtgttgttttaagctgcctc |
10580093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 3 - 337
Target Start/End: Original strand, 10376088 - 10376422
Alignment:
| Q |
3 |
cacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagct |
102 |
Q |
| |
|
||||||||||||||| |||||| | |||||||| | |||||| ||||||||| | |||||||||| |||||| || |||||||||||||| |||||| | |
|
|
| T |
10376088 |
cacttttagtttgcagaccaagtatatctttatactgtgcaaagaattgcaggctatcacacatgaccttcatttgagaattgatctctctgtagaaggt |
10376187 |
T |
|
| Q |
103 |
attaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattg |
202 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10376188 |
gttaaaaggagaagaaaggaagttcaacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcataactgatttcattg |
10376287 |
T |
|
| Q |
203 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10376288 |
agcaagtcctcagcatcaaagatagcatctttcaagtcatcaagccattgcttgacagaaggattgatgatctgcttctcctctgcatcatccagcacaa |
10376387 |
T |
|
| Q |
303 |
cttgaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| |
|
|
| T |
10376388 |
cttgaagagtgagcagtgttgtttttaactgcctc |
10376422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 337
Target Start/End: Complemental strand, 10088613 - 10088282
Alignment:
| Q |
6 |
ttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctatt |
105 |
Q |
| |
|
|||||||||||| |||||| | |||||||| | |||||||||||||| | ||||||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
10088613 |
ttttagtttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaagctatt |
10088514 |
T |
|
| Q |
106 |
aaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagc |
205 |
Q |
| |
|
||||||||| |||||||||||| |||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
10088513 |
aaaaggagatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaatcataactgatttcgctgagc |
10088414 |
T |
|
| Q |
206 |
aagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaactt |
305 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10088413 |
aagtcctcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctccgcatcatccagcacaactt |
10088314 |
T |
|
| Q |
306 |
gaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
10088313 |
gaagagtgagcagtgttgttttcagctgcctc |
10088282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 6 - 337
Target Start/End: Complemental strand, 10195496 - 10195165
Alignment:
| Q |
6 |
ttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctatt |
105 |
Q |
| |
|
|||||||||||| |||||| | |||||||| | |||||||||||||| | ||||||||||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
10195496 |
ttttagtttgcagaccaagtatatctttattctgtgcaaacaattgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaagctatt |
10195397 |
T |
|
| Q |
106 |
aaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagc |
205 |
Q |
| |
|
||||||||| |||||||||||| |||||||| | |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| | |
|
|
| T |
10195396 |
aaaaggagatgaaaggaagttcatcacctgataacttttgttttgagcttgtgcattctccaccttgcatcgaagggaatcataactgatttcgctgaac |
10195297 |
T |
|
| Q |
206 |
aagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaactt |
305 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10195296 |
aagtcctcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctccgcatcatccagcacaactt |
10195197 |
T |
|
| Q |
306 |
gaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
10195196 |
gaagagtgagcagtgttgttttcagctgcctc |
10195165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 3 - 337
Target Start/End: Original strand, 10434287 - 10434621
Alignment:
| Q |
3 |
cacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagct |
102 |
Q |
| |
|
||||||| ||||||| |||||| | |||||||| | |||||| | ||||| | ||||||||||||||||||| || |||||||||||||| ||||| || |
|
|
| T |
10434287 |
cacttttggtttgcagaccaagtatatctttattctgtgcaaaaagttgcaagctttcacacatgatcttcatttgagaattgatctctctgtagaaact |
10434386 |
T |
|
| Q |
103 |
attaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattg |
202 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||| |||||||| ||||||||||| ||| |
|
|
| T |
10434387 |
attaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcatgtgtattctccaccttggatcgaagggaatcataactgatttcgttg |
10434486 |
T |
|
| Q |
203 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
302 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10434487 |
agcaagtcctcggcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcaggtttgttgatctgcttctcctctgcatcatccagcacaa |
10434586 |
T |
|
| Q |
303 |
cttgaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10434587 |
cttgaagagtgagaagtgttgttttcagctgcctc |
10434621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 310
Target Start/End: Complemental strand, 8861109 - 8860805
Alignment:
| Q |
6 |
ttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctatt |
105 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | ||| || | ||||| | | ||||||||||||||||| ||||||||||||||||| |||||| | || |
|
|
| T |
8861109 |
ttttagtttgcaaaccaaggatatctttatgttgtgcgaaaatttgcaagctatcacacatgatcttcatttgggaattgatctctctgtagaaggtgtt |
8861010 |
T |
|
| Q |
106 |
aaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagc |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||||||| |||||| |
|
|
| T |
8861009 |
aaaaggagaagaaaggaagttccacacctgattagttttgtttgcagcttgtgtatcctccaccttgcatcgtaatgaatcataactgatttggttgagc |
8860910 |
T |
|
| Q |
206 |
aagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaactt |
305 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8860909 |
aaatcctcagcatcaaagagagcatctttcaagtcatcaagccattgtttgacagcacgattgttgatctgcttctcctctgcatcatccagcacagctt |
8860810 |
T |
|
| Q |
306 |
gaaga |
310 |
Q |
| |
|
||||| |
|
|
| T |
8860809 |
gaaga |
8860805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 11149095 - 11149420
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| | | |||||| | ||||||||| ||||||||| ||||||| ||||||||||||||||| |||| | |
|
|
| T |
11149095 |
agcacttttagtttgcaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttcatttgggaattgatctctctgtagatg |
11149194 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| || || ||||| |||| || |
|
|
| T |
11149195 |
gtgttaaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagtgattcataactaatttgat |
11149294 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
11149295 |
tcagcaaatcctcggcatcaaagatagcatctttcaagtcatcaagccattgtttgacagcaggattgttgatctgcttctcatcagcatcatccagcac |
11149394 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
| |||||||| ||||||||||||| |
|
|
| T |
11149395 |
agcttgaagaaccagcagtgttgttt |
11149420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 9838689 - 9838373
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| | |||| | | ||||| | | ||||||||||||||||||||||||||||||||| | || || |
|
|
| T |
9838689 |
agcacttttagtttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaattgatctctttgtaaaaa |
9838590 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9838589 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcgtaactgatttcgt |
9838490 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||||||| |||||||||||||||| | |||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||| || || |
|
|
| T |
9838489 |
tgagcaaatcctcagcatcaaagacaacatctttcaagttatcaagccactgtttgacatggggattgctgatctgcttctcctctgcatcatctagaac |
9838390 |
T |
|
| Q |
301 |
aacttgaagagtgagca |
317 |
Q |
| |
|
| | |||||| |||||| |
|
|
| T |
9838389 |
agcctgaagattgagca |
9838373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 9849567 - 9849251
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| | |||| | | ||||| | | ||||||||||||||||||||||||||||||||| | || || |
|
|
| T |
9849567 |
agcacttttagtttgcaaaccaagtatatctttattctgtgcataaagttgcaagctatcacacatgatcttcatctgggaattgatctctttgtaaaaa |
9849468 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9849467 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttgttttgagcttttgcattctccaccttgcatcgcagggaatcgtaactgatttcgt |
9849368 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||||||| |||||||||||||||| | |||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||| || || |
|
|
| T |
9849367 |
tgagcaaatcctcagcatcaaagacaacatctttcaagttatcaagccactgtttgacatggggattgctgatctgcttctcctctgcatcatctagaac |
9849268 |
T |
|
| Q |
301 |
aacttgaagagtgagca |
317 |
Q |
| |
|
| | |||||| |||||| |
|
|
| T |
9849267 |
agcctgaagattgagca |
9849251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 10077094 - 10076769
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||| |||||||||||| |||||| |||||||||| | |||||||||||||| ||||||||||||||||| | || |||||||||||| | |||||| |
|
|
| T |
10077094 |
agcaattttagtttgcagaccaagtacatctttattctgtgcaaacaattgcaacctttcacacatgatcttcgtttgagaattgatctctttgtagaag |
10076995 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
10076994 |
ctattaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcttgtgcattctccaccttgcatcgcagtgaatcgtaactgatttcgt |
10076895 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| || |||||| ||| ||||| |||||| ||||||||||||||||||||||||| || || |
|
|
| T |
10076894 |
tgagcaagtcctcggcatcaaagacagcatctttcaagttatcaagccactgtctgacatggggattgctgatctgcttctcctctgcatcatctagtac |
10076795 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
| | |||||| |||||| ||||||| |
|
|
| T |
10076794 |
agcctgaagattgagcatggttgttt |
10076769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 49 - 326
Target Start/End: Original strand, 10364087 - 10364364
Alignment:
| Q |
49 |
ttgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaaggagaagaaaggaagttccacacctgattagttttattt |
148 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || | ||| |
|
|
| T |
10364087 |
ttgcaggctttcacacatgatcttcatctgggaattgatctctctatagaagctattgaaaggagataaaaggaagttccacacctgattacttctgttt |
10364186 |
T |
|
| Q |
149 |
tgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagcc |
248 |
Q |
| |
|
||||||| || |||||| |||||||||||||||| ||||||||||| | ||||| ||||| |||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
10364187 |
ccagcttgtttactctccattgtgcatcgcagggaatcataactgatttcgtgaagcaaatcctcggcatcaaagacagcatctttcaagccatcaagcc |
10364286 |
T |
|
| Q |
249 |
attgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10364287 |
attgtttgacagcaggattgttgatctgcttctcttctgcgtcatccagcacaacttgaagagtgagcagtgttgttt |
10364364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 11131267 - 11131592
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| | | |||||| | ||||||||| ||||||||| |||| || |||||||||||||||| ||||| | |
|
|
| T |
11131267 |
agcacttttagtttgtaaaccaaggatatctttgttttgtgcaaaaatttgcaggttgtcacacatggtcttaatttgggaattgatctctccatagatg |
11131366 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| || || ||||| |||| || |
|
|
| T |
11131367 |
tttttaaaaggagaagaaaggaagttccagacctgattagttttgtttgcagcttgtgtattctccaccttgcatcgcagtgactcataactaatttgat |
11131466 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
| ||||| ||||| |||||||||||||||||||||||||||| || ||||| |||||||||| | |||||||||||||||||||| |||||||||||||| |
|
|
| T |
11131467 |
tcagcaaatcctccgcatcaaagatagcatctttcaagtcatcaacccattttttgacagcacggttgttgatctgcttctcctcagcatcatccagcac |
11131566 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
| |||||||| ||||||||||||| |
|
|
| T |
11131567 |
agcttgaagaaccagcagtgttgttt |
11131592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 6 - 306
Target Start/End: Original strand, 11160263 - 11160563
Alignment:
| Q |
6 |
ttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctatt |
105 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| | ||| || | ||||| | | ||||||||||||||||| |||||||||||||||||||||||| | || |
|
|
| T |
11160263 |
ttttactttgcaaaccaaggatatctttatgttgtgcgaaaagttgcaagctatcacacatgatcttcatttgggaattgatctctctatagaaggtgtt |
11160362 |
T |
|
| Q |
106 |
aaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagc |
205 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| || || ||||| |||| ||| ||| |
|
|
| T |
11160363 |
aaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcagtgattcataactaatttgattcagc |
11160462 |
T |
|
| Q |
206 |
aagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaactt |
305 |
Q |
| |
|
|| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
11160463 |
aaatcctcggcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcacggttgttgatctacttctcctctgcatcatccagcacagctt |
11160562 |
T |
|
| Q |
306 |
g |
306 |
Q |
| |
|
| |
|
|
| T |
11160563 |
g |
11160563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 6 - 310
Target Start/End: Complemental strand, 10889129 - 10888825
Alignment:
| Q |
6 |
ttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctatt |
105 |
Q |
| |
|
||||||||||||||||||||| ||||||||| | |||||| | ||||| | | | ||||||||||||||| ||||||||||||||||| |||||| | || |
|
|
| T |
10889129 |
ttttagtttgcaaaccaaggatatctttatgttgtgcaaaaagttgcaagctattacacatgatcttcatttgggaattgatctctctgtagaaggtgtt |
10889030 |
T |
|
| Q |
106 |
aaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagc |
205 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||| ||| | |||||||||||||||||||||||||| || || ||||| |||| || ||| |
|
|
| T |
10889029 |
aaaaggagaagaaaggaagctccacacctgactagttttgtttgtggattgtgtattctccaccttgcatcgcaatgattcataactaatttggttcagc |
10888930 |
T |
|
| Q |
206 |
aagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaactt |
305 |
Q |
| |
|
|| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
10888929 |
aaatcctccgcatcaaagacagcatctttcaagtcatcaagccattgtttgacagcacggttgttgatctgcttctcctcagcatcatccagcacagctt |
10888830 |
T |
|
| Q |
306 |
gaaga |
310 |
Q |
| |
|
||||| |
|
|
| T |
10888829 |
gaaga |
10888825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 11769062 - 11768736
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
||||||||||||||||||||| | | |||||||| | |||||| | ||||||| ||||||||||||||||||| |||||||||||||||| ||||| | |
|
|
| T |
11769062 |
agcacttttagtttgcaaacctaatatatctttattttgtgcaaaaagttgcaggctttcacacatgatcttcatatgggaattgatctctccatagatg |
11768963 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
| |||||||| || ||||| ||||||||||||||||||||||| ||| ||||||| | ||||||| ||||||||| ||||| || ||||| |||| || |
|
|
| T |
11768962 |
tttttaaaaggggatgaaagtaagttccacacctgattagttttgtttctagcttgtttcttctccatcttgcatcggagggagtcataacttatttgat |
11768863 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| || |
|
|
| T |
11768862 |
cgagtaaatcctcagcatcaaagatagcgtctttcaagtcatcaagccattgtttgacagcaagattgttcatctgcttctcctccgcatcatccagtac |
11768763 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgtttt |
327 |
Q |
| |
|
| | ||||| |||||||| |||||||| |
|
|
| T |
11768762 |
agcctgaagtgtgagcagggttgtttt |
11768736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 13160799 - 13160483
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | |||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
13160799 |
agtttgcaagccaaggatatctctttgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaa |
13160700 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||||| |||| || |||||| ||||||||||| | |||| ||||||| | ||||||||| | ||||||||||| |||||| |||||| || ||||| | |
|
|
| T |
13160699 |
ggagatgaaaagaggttccaaacctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtaattgatttggttaagcaaat |
13160600 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||| |
|
|
| T |
13160599 |
cctcagcatcatagattgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaag |
13160500 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
13160499 |
agcgagcagtgttgttt |
13160483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 13332723 - 13332407
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||| | |||| | || | |||||| | |||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
13332723 |
agtttgcaagccaagaatatctctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaa |
13332624 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||||| |||| || |||||| ||||||||||| | |||| ||||||| | ||||||||||| ||||||||||| |||||| |||||| || ||||| | |
|
|
| T |
13332623 |
ggagacgaaaagaggttccaaacctgattagtcatgttttcagcttgtttcttctccaccttacatcgcagggagtcgtaattgatttggttaagcaaat |
13332524 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||||||||| | ||||| |
|
|
| T |
13332523 |
cctcagcatcatagattgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatccagcaccgcctgaag |
13332424 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
13332423 |
agcgagcagtgttgttt |
13332407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 13289484 - 13289168
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | ||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
13289484 |
agtttgcaagccaaggatatctctctgttgtgcaaaaagctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagagttttaaaa |
13289385 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||||| |||| || |||||| ||||||||||| | |||| ||||||| | ||||||||||| ||||||||||| |||||| |||||| || ||||| | |
|
|
| T |
13289384 |
ggagatgaaaagaggttccaaacctgattagtcatgttttcagcttgtttcttctccaccttacatcgcagggagtcgtaattgatttggttaagcaaat |
13289285 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||| |
|
|
| T |
13289284 |
cctcagcatcatagattgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaag |
13289185 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| ||| |||||||||| |
|
|
| T |
13289184 |
agcgagtagtgttgttt |
13289168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 13170850 - 13170534
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | |||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
13170850 |
agtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaa |
13170751 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||| | |||| || |||||| ||||||||||| | |||| || |||| | ||||||||||| ||||| ||||| |||||| |||||| || ||||| | |
|
|
| T |
13170750 |
ggacatgaaaagaggttccaaacctgattagtcatgttttcagattgtatcttctccaccttacatcggagggagtcgtaattgatttggttaagcaaat |
13170651 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||| || || | ||||| |
|
|
| T |
13170650 |
cctcagcatcatagattgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatcaagaaccgcctgaag |
13170551 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
13170550 |
agcgagcagtgttgttt |
13170534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 13343908 - 13343592
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | ||||| ||| |||||| |||||||| || ||||||||||||| ||||| | ||||| |
|
|
| T |
13343908 |
agtttgcaagccaaggatatctctctgttgtgcaaaaatctgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaac |
13343809 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||||| |||| || |||||| ||||||||||| | |||| ||||||| | ||||||||| | ||||||||||| ||||| |||||| || ||||| | |
|
|
| T |
13343808 |
ggagacgaaaagaggttccaaacctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtagttgatttggttaagcaaat |
13343709 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| ||||| | ||||||||||||||||| | ||||| |
|
|
| T |
13343708 |
cctcagcatcatagattgcatctttcagctgatccaaccattgtttgacagcagtgttggtgatttgcttatgttctgcatcatccagcaccgcctgaag |
13343609 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
13343608 |
agcgagcagtgttgttt |
13343592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 10517114 - 10516990
Alignment:
| Q |
203 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
302 |
Q |
| |
|
||||| || |||| ||||||||| |||||||||||||||| ||||||||||||||||| | ||| |||| ||| |||| |||||||||| |||||||| |
|
|
| T |
10517114 |
agcaaatcttcagaatcaaagattgcatctttcaagtcatcaagccattgtttgacaggaagatcattgaactgtttctgctctgcatcaaccagcacag |
10517015 |
T |
|
| Q |
303 |
cttgaagagtgagcagtgttgtttt |
327 |
Q |
| |
|
||||||||| | |||||||||||| |
|
|
| T |
10517014 |
cttgaagagcaaacagtgttgtttt |
10516990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 327
Target Start/End: Original strand, 11782422 - 11782546
Alignment:
| Q |
203 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
302 |
Q |
| |
|
||||| || ||||||||||| || |||||||||||||||| ||||||||||||||||| | ||| |||| ||| |||| |||||||||| |||||||| |
|
|
| T |
11782422 |
agcaaatcttcagcatcaaatattgcatctttcaagtcatcaagccattgtttgacaggaagatctttgaactgtttctgctctgcatcaaccagcacag |
11782521 |
T |
|
| Q |
303 |
cttgaagagtgagcagtgttgtttt |
327 |
Q |
| |
|
||||||||| | |||||||||||| |
|
|
| T |
11782522 |
cttgaagagcaaacagtgttgtttt |
11782546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 10527024 - 10526877
Alignment:
| Q |
164 |
tccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcag |
263 |
Q |
| |
|
||||||||||| ||||| | |||||| |||||| | ||||| || ||||||||||| || |||||||||||||||| ||||||||||||||||| | |
|
|
| T |
10527024 |
tccaccttgcaccgcagagcatcgtagctgattaagtcaagcaaatcttcagcatcaaatattgcatctttcaagtcatgaagccattgtttgacaggaa |
10526925 |
T |
|
| Q |
264 |
gattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
311 |
Q |
| |
|
| | ||| ||| |||| |||||||||| |||||||| ||||||||| |
|
|
| T |
10526924 |
ggtcagtgaactgtttctgctctgcatcaaccagcacagcttgaagag |
10526877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 10126594 - 10126433
Alignment:
| Q |
151 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
250 |
Q |
| |
|
||||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || |||||| |
|
|
| T |
10126594 |
agcttgtttcttctccagcttgcatcgtagggcattgtagctgatttgattgagcaaatcctcagcatcatagattgcatcttttaaccgatccagccat |
10126495 |
T |
|
| Q |
251 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
312 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10126494 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10126433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 10085735 - 10085611
Alignment:
| Q |
202 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcaca |
301 |
Q |
| |
|
|||||| || ||||||||||||| | |||||||||||| || |||||| ||||||||| ||||| ||||||||||||||| ||||||||| || ||| |
|
|
| T |
10085735 |
gagcaaatcttcagcatcaaagaaaacatctttcaagttatcaagccactgtttgacatggggattactgatctgcttctcctttgcatcatctagtaca |
10085636 |
T |
|
| Q |
302 |
acttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
| |||||| |||||| ||||||| |
|
|
| T |
10085635 |
gcctgaagattgagcatggttgttt |
10085611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 10192655 - 10192531
Alignment:
| Q |
202 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcaca |
301 |
Q |
| |
|
|||||| || ||||||||||||| | |||||||||||| || |||||| ||||||||| ||||| ||||||||||||||| ||||||||| || ||| |
|
|
| T |
10192655 |
gagcaaatcttcagcatcaaagaaaacatctttcaagttatcaagccactgtttgacatggggattactgatctgcttctcctttgcatcatctagtaca |
10192556 |
T |
|
| Q |
302 |
acttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
| |||||| |||||| ||||||| |
|
|
| T |
10192555 |
gcctgaagattgagcatggttgttt |
10192531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 10260364 - 10260203
Alignment:
| Q |
151 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
250 |
Q |
| |
|
||||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || | |||| |
|
|
| T |
10260364 |
agcttgtttcttctccagcttgcatcgtagggcattgtagctgattttattgagcaaatcctcagcatcatagattgcatcttttaaccgatccaaccat |
10260265 |
T |
|
| Q |
251 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
312 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10260264 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10260203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 311
Target Start/End: Complemental strand, 10541600 - 10541492
Alignment:
| Q |
203 |
agcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaa |
302 |
Q |
| |
|
||||| || |||||||||||||| |||||||||||||||| ||||||||| ||||||| | | | ||| ||| |||| |||||||||| |||||||| |
|
|
| T |
10541600 |
agcaaatcttcagcatcaaagattgcatctttcaagtcatcaagccattgcttgacaggaaggtcaatgaactgtttctgctctgcatcaaccagcacag |
10541501 |
T |
|
| Q |
303 |
cttgaagag |
311 |
Q |
| |
|
|||||||| |
|
|
| T |
10541500 |
attgaagag |
10541492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 10031669 - 10031508
Alignment:
| Q |
151 |
agcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccat |
250 |
Q |
| |
|
||||||| | ||||||| ||||||||| | || || ||| ||||||| ||||||||| |||||||||||| |||| |||||||| || || | |||| |
|
|
| T |
10031669 |
agcttgtttcttctccagcttgcatcgtatggcattgtagctgatttgattgagcaaatcctcagcatcatagattgcatcttttaaccgatccaaccat |
10031570 |
T |
|
| Q |
251 |
tgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
312 |
Q |
| |
|
||||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10031569 |
tgtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10031508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 312
Target Start/End: Complemental strand, 10183904 - 10183744
Alignment:
| Q |
152 |
gcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccatt |
251 |
Q |
| |
|
|||||| | ||||||| ||||||||| |||| || ||| ||||||| ||||| ||| |||||||||||| |||| |||||||| || || | ||||| |
|
|
| T |
10183904 |
gcttgtttcttctccatcttgcatcgtagggcattgtagctgatttgattgaacaaatcctcagcatcatagattgcatcttttaaccgatccaaccatt |
10183805 |
T |
|
| Q |
252 |
gtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagt |
312 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||||||| || ||||| | |||||| |
|
|
| T |
10183804 |
gtttgattctgggtttgaggatctgcttctcctctgcatcatctagtacaacctcaagagt |
10183744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 332
Target Start/End: Complemental strand, 3884757 - 3884670
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttgagct |
332 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||||||||| ||||||| || |||| |||||||| | | ||||||| |||| |||| |
|
|
| T |
3884757 |
agccattctttgacagcagggttggtgatttgcttctcctcagcatcattcaacacagcttgaagacttaacagtgttattttcagct |
3884670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 10500204 - 10500146
Alignment:
| Q |
202 |
gagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacag |
260 |
Q |
| |
|
|||||| || |||||||||||||| | ||||||||||||| ||||||||||||||||| |
|
|
| T |
10500204 |
gagcaaatcttcagcatcaaagattgtgtctttcaagtcatcaagccattgtttgacag |
10500146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 4080909 - 4080970
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttg |
306 |
Q |
| |
|
|||||||| ||||||||||| ||| |||||||||||||||| ||||||| ||| ||| |||| |
|
|
| T |
4080909 |
agccattgcttgacagcagggttggtgatctgcttctcctcagcatcattcagtacagcttg |
4080970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 4115785 - 4115853
Alignment:
| Q |
254 |
ttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
322 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| ||||||| ||| ||| |||||||| | ||||||||| |
|
|
| T |
4115785 |
ttgacagcaggattagtgatctgtttctcctcagcatcattcagtacagcttgaagactcagcagtgtt |
4115853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 4061301 - 4061378
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
322 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||||||| ||||||| || ||| |||| ||| | ||||||||| |
|
|
| T |
4061301 |
agccatttcttgacagcagggttggtgatctgcttctcctcagcatcatgaagtacagcttgcagactcagcagtgtt |
4061378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 4129298 - 4129233
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
310 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||| |||||||| ||||||| || ||| |||||||| |
|
|
| T |
4129298 |
agccattgcttgacagcagggttggtgatctgtttctcctcagcatcatgaagtacagcttgaaga |
4129233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 4140999 - 4140922
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
322 |
Q |
| |
|
||||||| ||| |||||||||||| |||| || |||||||| ||||||| || ||| |||||||| | ||||||||| |
|
|
| T |
4140999 |
agccattctttaacagcaggattggtgatttgtttctcctcagcatcatgaagtacagcttgaagactcagcagtgtt |
4140922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 26906725 - 26906389
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||| |||||||| || |||||||||||||| |||||| |
|
|
| T |
26906725 |
agcacttttagtttgcaaaccaaggatatctttatgttgtgcaaacaattgcaggctttcacacattatcttcatttgagaattgatctctctgtagaag |
26906626 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||||| | |
|
|
| T |
26906625 |
ctattaaaaggagatgaaaggaagttcaacacctgattagttttgttttgagcttgtgtattctcgactttgcatcgcagggaatcataactaatttcgt |
26906526 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26906525 |
tgagcaagtcctcaacatcaaagatagcatctttcaagtcatcaagccattgtttgacagcaggattgttgatctgtttctcctctgcatcatccagcac |
26906426 |
T |
|
| Q |
301 |
aacttgaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
26906425 |
aacctgcagagtgagcagtgttgtttttagctgcctc |
26906389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 337
Target Start/End: Original strand, 50053 - 50382
Alignment:
| Q |
5 |
cttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctat |
104 |
Q |
| |
|
|||||||||||||||| ||| | |||||| ||| |||| | ||||||| |||||||||||||||||||||||||||||||||||| |||| | | |
|
|
| T |
50053 |
cttttagtttgcaaacgaagtatatcttttcttttttcaaaaagttgcaggctttcacacatgatcttcatctgggaattgatctctccatagt---ttt |
50149 |
T |
|
| Q |
105 |
taaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgag |
204 |
Q |
| |
|
|||||| ||| |||| ||||||| |||||||| | |||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
50150 |
taaaagaagatgaaaagaagttcatcacctgataaattttgctttgagcttttgcattctccaccttgcatcgcagggaatcataactgatttcgctgag |
50249 |
T |
|
| Q |
205 |
caagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaact |
304 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
50250 |
caagtcctcagcatcaaagacagcatctttcaagtcatcaagccatagtttgacagcaggattgttgatctgcttctcctcagcatcatccagcacaact |
50349 |
T |
|
| Q |
305 |
tgaagagtgagcagtgttgttttgagctgcctc |
337 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| |
|
|
| T |
50350 |
tgaagagtgagaagtgttgttttcagctgcctc |
50382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 44957950 - 44958264
Alignment:
| Q |
1 |
agcacttttagtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaag |
100 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||||| | |||||| | ||||||| ||||||||| |||||||| || ||||||||||||| ||||||| |
|
|
| T |
44957950 |
agcacttttagtttccaaaccaattatatctttatgctgtgcaaaaagttgcagggattcacacataatcttcatttgagaattgatctctccatagaag |
44958049 |
T |
|
| Q |
101 |
ctattaaaaggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcat |
200 |
Q |
| |
|
| ||||||||||| |||||||||||||| |||||||||||||| || | |||||||||||||||| ||||| ||||||||||| || || |||| | |
|
|
| T |
44958050 |
tttttaaaaggagatgaaaggaagttccagacctgattagttttgttggcaacttgtgtattctccactttgcaacgcagggaatcatagctaatttggt |
44958149 |
T |
|
| Q |
201 |
tgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcac |
300 |
Q |
| |
|
||||||| ||||| |||||||| || | || ||||||||||| ||||||||||||||||| | | ||| |||| |||||||||||||||||||| ||||| |
|
|
| T |
44958150 |
tgagcaaatcctcggcatcaaatattgtatttttcaagtcatcaagccattgtttgacagtaaggttggtgatttgcttctcctctgcatcatcaagcac |
44958249 |
T |
|
| Q |
301 |
aacttgaagagtgag |
315 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
44958250 |
aacctgaagagtgag |
44958264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 326
Target Start/End: Complemental strand, 11484685 - 11484520
Alignment:
| Q |
161 |
ttctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacag |
260 |
Q |
| |
|
||||| ||||||||||||| || ||| || ||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
11484685 |
ttctctaccttgcatcgcaaggcatcatagctgatttcattaagcaaatcctcagcatcaaagattgcatctttcaaccgatcaagccattgtttgattt |
11484586 |
T |
|
| Q |
261 |
caggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
|| | |||||||||||| ||||||||||| |||||||| | ||||| || |||||||||| |
|
|
| T |
11484585 |
tgggttgaaggatctgcttctcttctgcatcatcaagcacaacctcaagagcaagtagtgttgttt |
11484520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 326
Target Start/End: Original strand, 146189 - 146505
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | |||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
146189 |
agtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaa |
146288 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||||| |||| || |||||| ||||||||||| | |||| ||||||| | ||||||||| | ||||||||||| |||||| |||||| || ||||| | |
|
|
| T |
146289 |
ggagatgaaaagaggttccaaacctgattagtcatgttttcagcttgtttcttctccaccgtacatcgcagggagtcgtaattgatttggttaagcaaat |
146388 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| |||||| ||||||||||||||||| || ||||| |
|
|
| T |
146389 |
cctcagcatcatagattgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttcagttctgcatcatccagcaccacctgaag |
146488 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
146489 |
agcgagcagtgttgttt |
146505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 326
Target Start/End: Original strand, 136138 - 136454
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||| | || | |||||| | |||||| ||| |||||| |||||||| || ||||||||||||| ||||| | |||||| |
|
|
| T |
136138 |
agtttgcaagccaaggatatctctctgttgtgcaaaaagttgcagcctttgacacataatcttcatttgtgaattgatctctccatagagatttttaaaa |
136237 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtattctccaccttgcatcgcagggaatcgtaactgatttcattgagcaagt |
209 |
Q |
| |
|
||| | |||| || |||||| ||||||||||| | |||| || |||| | ||||||||||| ||||| ||||| |||||| |||||| || ||||| | |
|
|
| T |
136238 |
ggacatgaaaagaggttccaaacctgattagtcatgttttcagattgtatcttctccaccttacatcggagggagtcgtaattgatttggttaagcaaat |
136337 |
T |
|
| Q |
210 |
cctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaag |
309 |
Q |
| |
|
||||||||||| |||| |||||||||| | || | ||||||||||||||||| ||| |||| ||||||| ||||||||||| || || | ||||| |
|
|
| T |
136338 |
cctcagcatcatagattgcatctttcagttgatccatccattgtttgacagcagtgttggtgatttgcttctgttctgcatcatcaagaaccgcctgaag |
136437 |
T |
|
| Q |
310 |
agtgagcagtgttgttt |
326 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
136438 |
agcgagcagtgttgttt |
136454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 31679983 - 31680303
Alignment:
| Q |
10 |
agtttgcaaaccaaggacatctttatgatttgcaaacaattgcaggttttcacacatgatcttcatctgggaattgatctctctatagaagctattaaaa |
109 |
Q |
| |
|
||||||||| ||||||| |||||| || | |||||| | ||| || ||||| ||| ||||||| |||||||||||||||| ||| ||| | | |||| |
|
|
| T |
31679983 |
agtttgcaacccaaggatatctttttgttgtgcaaaaagttggagcctttcaatcatactcttcatttgggaattgatctctccatacaagttttgaaaa |
31680082 |
T |
|
| Q |
110 |
ggagaagaaaggaagttccacacctgattagttttattttgagcttgtgtatt------ctccaccttgcatcgcagggaatcgtaactgatttcattga |
203 |
Q |
| |
|
||||| |||||||| ||||| |||||| ||| | |||| |||||||||||| ||||||||||| || ||| |||| |||||||| | |||| |
|
|
| T |
31680083 |
ggagatgaaaggaaattccaaacctgaccagtgatgttttcagcttgtgtattactattctccaccttgcttctaaggcaatcataactgatctggttga |
31680182 |
T |
|
| Q |
204 |
gcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaac |
303 |
Q |
| |
|
|||| |||||||||||| | || ||||||||||| |||| ||||||||||||||||| | |||||||||||||||||| ||| |||||||| || ||| | |
|
|
| T |
31680183 |
gcaaatcctcagcatcatatattgcatctttcaactcatcaagccattgtttgacaggaagattgttgatctgcttcttctcagcatcatcaagaacagc |
31680282 |
T |
|
| Q |
304 |
ttgaagagtgagcagtgttgt |
324 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
31680283 |
atgaagagtgagaagtgttgt |
31680303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 29836321 - 29836176
Alignment:
| Q |
181 |
ggaatcgtaactgatttcattgagcaagtcctcagcatcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttc |
280 |
Q |
| |
|
|||||||||||| |||| || ||||| ||||| | |||| |||| |||||||| || ||||||||||||| | |||||| |||| | |||||||||| |
|
|
| T |
29836321 |
ggaatcgtaactaatttggttcagcaaatcctctgtatcatagattgcatcttttaaatcattaagccattctcggacagccggatcatggatctgcttc |
29836222 |
T |
|
| Q |
281 |
tcctctgcatcatccagcacaacttgaagagtgagcagtgttgttt |
326 |
Q |
| |
|
|||||||||| | ||||| ||| ||||||||| |||||||||| |
|
|
| T |
29836221 |
ctctctgcatcaactagcaccgcttcaagagtgagaagtgttgttt |
29836176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 17853378 - 17853471
Alignment:
| Q |
218 |
tcaaagatagcatctttcaagtcattaagccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagag |
311 |
Q |
| |
|
||||||||||| |||||||| |||| ||||||||||||||||| | ||| ||||| || |||| ||||||||| |||||||| ||||||||| |
|
|
| T |
17853378 |
tcaaagatagcgtctttcaaatcatcaagccattgtttgacaggaagatcgttgaattgtttctgttctgcatcaaccagcacagcttgaagag |
17853471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 332
Target Start/End: Original strand, 14005939 - 14006026
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgttgttttgagct |
332 |
Q |
| |
|
||||||| |||||||||||| ||| |||| ||||||||||| ||||||| || |||| |||||||| | | ||||||| |||| |||| |
|
|
| T |
14005939 |
agccattctttgacagcagggttggtgatttgcttctcctcagcatcattcaacacagcttgaagacttaacagtgttattttcagct |
14006026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 13932725 - 13932648
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaagagtgagcagtgtt |
322 |
Q |
| |
|
|||||||| || |||||||| ||| |||||||||||||||| ||||||| || ||| |||| ||| | ||||||||| |
|
|
| T |
13932725 |
agccattgcttaacagcagggttggtgatctgcttctcctcagcatcatgaagtacagcttgtagactcagcagtgtt |
13932648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 310
Target Start/End: Complemental strand, 18025 - 17960
Alignment:
| Q |
245 |
agccattgtttgacagcaggattgttgatctgcttctcctctgcatcatccagcacaacttgaaga |
310 |
Q |
| |
|
|||||||| ||||||||||||||| |||| || ||||| || ||||||| ||| ||| |||||||| |
|
|
| T |
18025 |
agccattgcttgacagcaggattggtgatttgtttctcttcagcatcattcagtacagcttgaaga |
17960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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