View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9303_low_73 (Length: 303)
Name: NF9303_low_73
Description: NF9303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9303_low_73 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 31456254 - 31455984
Alignment:
| Q |
18 |
gaaatatcatctgtaggccttgcaagaactccaactacaaaagtgtgttttggtttaagtcttagctttttccactgagctaaagttggtgttaggctca |
117 |
Q |
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| T |
31456254 |
gaaatatcatctgtaggccttgcaagaactccaactacaaaagtgtgttttggtttaagtcttagcttcttccactgagctaaagttggtgttaggctca |
31456155 |
T |
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| Q |
118 |
tgttagttgcaatcatctttgaatccatttgtgagt-gttattgattttcatgtgaaaggagctttatataggaggggattaataaggacaaatagtgca |
216 |
Q |
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||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31456154 |
tgttatgtgcaatcatctttgaatccatttgtgagtagttattgattttcatgtgaaaggagctttatataggaggggattaataaggacaaatagtgca |
31456055 |
T |
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| Q |
217 |
tgaaaagcatcttagcacaaacctcttactcctgattctgttttgtgactctctagatgctttatttgttg |
287 |
Q |
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||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
31456054 |
tgaaaagcatcttagcacaaagctcttactcatgattctgttttgtgactctctagatgctttatttgttg |
31455984 |
T |
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