View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9307_high_4 (Length: 282)
Name: NF9307_high_4
Description: NF9307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9307_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 32 - 268
Target Start/End: Complemental strand, 3189310 - 3189074
Alignment:
| Q |
32 |
gacaaaacatatatatttgaaaagtattgaatggtagttaaccccacaagatttgctcctaatgaagcattgcnnnnnnnnttagttgatgaaacgttgc |
131 |
Q |
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| T |
3189310 |
gacaaaacatatatatttgaaaagtattgaatggtagttaacctcacaagagttgctcctaatgaagcattgcaaaaaaaattagtggatgaaacactgc |
3189211 |
T |
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| Q |
132 |
agcaaattgaagctatacaaatcttaaaaagagtagtttgattgacactaatcacctaaggtctagcatccaatactctataaatcacaacctgtataat |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3189210 |
agcaaattgaagctatacaaatcttaaaaagagtagtttgattgacactaatcatctaaggtctagcatccaatactctataaatcacaacctgtataat |
3189111 |
T |
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| Q |
232 |
aagaaagtatcgtttaaagtttgaacatgaatatact |
268 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
3189110 |
aagaaagtatcgtttaaagtttgaacatgaatatact |
3189074 |
T |
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