View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9308_low_36 (Length: 330)
Name: NF9308_low_36
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9308_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 7 - 318
Target Start/End: Original strand, 29016722 - 29017033
Alignment:
| Q |
7 |
aaagtattgtctttatcatcattttcctggtttaggtgcaggctgacccactagaagttaagttttattgctagtagttttcccttcagcctcctccaac |
106 |
Q |
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| T |
29016722 |
aaagtattgtctttatcatcattttcctggtttaggtgcaggctgacccactagaagttaagttttattgctagtagttttccctccagcctcctccaac |
29016821 |
T |
|
| Q |
107 |
caaactttcctgttagatttgaccatttatgtatctaacaatgattgaaatctggacgactcatattctcaactaataaaataggaatacgagtcgtccg |
206 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
29016822 |
caaactttcctgttagatttgaccatttatgtatccaacaatgattgaaatctggacgactcatattctcaactaataaaataggaataagagtcgtccg |
29016921 |
T |
|
| Q |
207 |
ataatcatctaacaaccaagatatgtaatttggatgatgtagatagctcattcgatgtttgactcttaacacatctaagatacgacatttaccatatctt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29016922 |
ataatcatctaacaaccaagatatgtaatttggatgatgtagatagctcattcgatgtttgactcttaacacatctaagatacgacatttaccatatctt |
29017021 |
T |
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| Q |
307 |
aagcatgaccta |
318 |
Q |
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|||||||||||| |
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| T |
29017022 |
aagcatgaccta |
29017033 |
T |
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