View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9308_low_45 (Length: 269)
Name: NF9308_low_45
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9308_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 36403219 - 36403469
Alignment:
| Q |
1 |
aggtggaagacgaggtggtgttaaggcatggatttctcttatttctgttatttgttcatcttcttggttttcctctgatatatggctggtggaagtattt |
100 |
Q |
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| T |
36403219 |
aggtggaagacgaggtggtgttaaggcatggatttctcttatttctgttatttgttcatcttcttggttttcctctgatatatggctggtggaagtattt |
36403318 |
T |
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| Q |
101 |
agattattattcaacatgtgtacaatctcaatagtacggagggtaagtttgttatgaaacaacaaagtgaagagatttcattcaagcatggtatagtgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36403319 |
agattattattcaacatgtgtacaatctcaatagtacggagggaaagtttgttatgaaacaacaaagtgaagagatttcattcaagcatggtatagtgat |
36403418 |
T |
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| Q |
201 |
agtgtgtgtgttttgaggttgttagtgaatggaaatggtgagaagagtttg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36403419 |
agtgtgtgtgttttgaggttgttagtgaatggaaatggtgagaagagtttg |
36403469 |
T |
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