View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9308_low_57 (Length: 248)

Name: NF9308_low_57
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9308_low_57
NF9308_low_57
[»] chr1 (5 HSPs)
chr1 (1-212)||(45795431-45795642)
chr1 (1-212)||(13867537-13867748)
chr1 (1-207)||(34352630-34352854)
chr1 (1-71)||(3544964-3545034)
chr1 (168-207)||(5808973-5809012)
[»] chr4 (3 HSPs)
chr4 (1-212)||(43516452-43516663)
chr4 (15-72)||(20544305-20544362)
chr4 (39-77)||(54483016-54483054)
[»] chr3 (6 HSPs)
chr3 (9-212)||(40513428-40513631)
chr3 (39-88)||(18368801-18368850)
chr3 (131-207)||(34829774-34829850)
chr3 (1-71)||(31675137-31675207)
chr3 (1-71)||(31921213-31921283)
chr3 (6-78)||(34829631-34829703)
[»] chr2 (4 HSPs)
chr2 (10-109)||(11196567-11196666)
chr2 (105-200)||(11196680-11196775)
chr2 (39-88)||(35488082-35488131)
chr2 (39-88)||(8066072-8066121)
[»] chr6 (5 HSPs)
chr6 (104-212)||(14686712-14686820)
chr6 (37-88)||(23065893-23065944)
chr6 (1-71)||(14844000-14844070)
chr6 (37-88)||(9565610-9565661)
chr6 (10-72)||(14686870-14686932)
[»] chr7 (1 HSPs)
chr7 (10-72)||(26855929-26855991)
[»] chr5 (1 HSPs)
chr5 (1-71)||(476420-476490)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-71)||(7875-7945)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-71)||(34472-34542)
[»] chr8 (1 HSPs)
chr8 (10-78)||(9510998-9511066)


Alignment Details
Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 45795431 - 45795642
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctct 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  45795431 aatatcagactgcaaaacgacaccattaattaaaagcctacactcctctagcatatcctcctcccacacccttaacctacgccgccaattccacgcctct 45795530  T
Q  101 ccatcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  45795531 ccatcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaaactgatacaaaaaggaacatcacctagccacctgtcat 45795630  T
Q  201 accaaaactaag 212  Q
    ||||||| ||||    
T  45795631 accaaaagtaag 45795642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 13867748 - 13867537
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctct 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  13867748 aatatcagactgcaaaacgacaccattaattaaaagcctacactcctctagcatatcctcctcccacacccttaacctacgccgccaattccacgcctct 13867649  T
Q  101 ccatcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcat 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13867648 ccaacaaccatatcagctaccgtgctcaacttattagacactaaattaaaaagacgacggaacctgatacaaaaaggaacatcaccaagccacctgtcat 13867549  T
Q  201 accaaaactaag 212  Q
    ||||||| ||||    
T  13867548 accaaaagtaag 13867537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 34352630 - 34352854
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctct 100  Q
    |||| ||||||||||||||||||||||| ||||  || |||||||||||||||  ||||||||||||||||| |||||||||| |||   | ||||||||    
T  34352630 aatatcagactgcaaaacgacaccattagttaattgcctacactcctctagcatctcctcctcccacaccctcaacctacgcctccagccccacgcctct 34352729  T
Q  101 ccatcaacc------------------atatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacat 182  Q
    || ||||||                  |||| |||||| ||||||| |||||||||| |||| | |||||| ||||| ||||||||||||||||||||||    
T  34352730 ccgtcaacctccccaccaagggcaaccatattagctactgtgctcagcttattagacgctaagtcaaataggcgacgcaacctgatacaaaaaggaacat 34352829  T
Q  183 cactcagccacctgtcataccaaaa 207  Q
    |||  |||||||||||||| |||||    
T  34352830 caccaagccacctgtcatatcaaaa 34352854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3545034 - 3544964
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| |||||||||| |||  || ||||||| |||| ||| ||||||||||||||||    
T  3545034 aatatcagactgcaaaacaacaccattaagtaattgcctacactcttctaccaactcctcctcccacaccc 3544964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 5808973 - 5809012
Alignment:
Q  168 tacaaaaaggaacatcactcagccacctgtcataccaaaa 207  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  5808973 tacaaaaaggaacatcaccaagccacctgtcataccaaaa 5809012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 43516663 - 43516452
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctct 100  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||    
T  43516663 aatatcagactgcaaaacgacaccattaattaaatgcctacactcctctagcatatcctcctcccacaccctcaacctacgccgccaactccacgcctct 43516564  T
Q  101 ccatcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  43516563 ccatcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcaccaagccacttgtcat 43516464  T
Q  201 accaaaactaag 212  Q
    ||||||| ||||    
T  43516463 accaaaagtaag 43516452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 20544305 - 20544362
Alignment:
Q  15 aaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccct 72  Q
    ||||||||||||||||||||| | |||||||||||| ||  |||||||||||| ||||    
T  20544305 aaacgacaccattaattaaaaacctacactcctctaacatctcctcctcccacgccct 20544362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 54483054 - 54483016
Alignment:
Q  39 tacactcctctagcaaatcctcctcccacacccttaacc 77  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  54483054 tacactcctctaccaaatcctcctcccacacccataacc 54483016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 212
Target Start/End: Complemental strand, 40513631 - 40513428
Alignment:
Q  9 actgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctctccatcaac 108  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  40513631 actgcaaaacgacaccattaattaacagcctacactcctctagcatatcctcctcccacacccttaacctacgccgccaattccacccctctccagcaac 40513532  T
Q  109 catatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcataccaaaac 208  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||     
T  40513531 catatcagctatcgtgctcaacttatcagacactaaattaaaaagtcgacggaacctgatacagaaaggaacatcacccagccatctgtcataccaaaag 40513432  T
Q  209 taag 212  Q
    ||||    
T  40513431 taag 40513428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 18368850 - 18368801
Alignment:
Q  39 tacactcctctagcaaatcctcctcccacacccttaacctacgccgccaa 88  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  18368850 tacactcctctagcaaagcctcctcccacacccacaacctacgccgccaa 18368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 34829774 - 34829850
Alignment:
Q  131 ttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcataccaaaa 207  Q
    ||||||||||||| || |||||  ||||| |||||  |||||||||| |||||||  ||||||||||||||||||||    
T  34829774 ttattagacactagatcaaataaccgacgaaacctagtacaaaaagggacatcaccaagccacctgtcataccaaaa 34829850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31675137 - 31675207
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| |||||||||| |||   | |||||||||||| ||| ||||||||||||||||    
T  31675137 aatatcagactgcaaaaccacaccattaagtaatttcctacactcctctaccaactcctcctcccacaccc 31675207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31921283 - 31921213
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| |||||||||| |||   | |||||||||||| ||| ||||||||||||||||    
T  31921283 aatatcagactgcaaaaccacaccattaagtaatttcctacactcctctaccaactcctcctcccacaccc 31921213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 34829631 - 34829703
Alignment:
Q  6 cagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacct 78  Q
    ||||||||||||| |||||||||| |||   | |||||||||||||||  ||||||||||||| ||| |||||    
T  34829631 cagactgcaaaacaacaccattaagtaatttcctacactcctctagcatctcctcctcccacagcctcaacct 34829703  T

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Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 11196567 - 11196666
Alignment:
Q  10 ctgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaattcgacgcctctccatcaacc 109  Q
    ||||||||||||||||||||||||  || |||||||||||||||  ||||||||||||||||| ||| | |||| ||||  | |||||||||| ||||||    
T  11196567 ctgcaaaacgacaccattaattaattgcctacactcctctagcatctcctcctcccacaccctcaacattcgcctccaaccccacgcctctccgtcaacc 11196666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 11196680 - 11196775
Alignment:
Q  105 caaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcat 200  Q
    ||||||||||||| ||||| ||||  ||||||||| |||| | ||||| || |||||||||| |||||||||||  |||||  |||||||| ||||    
T  11196680 caaccatatcagccaccgtactcagtttattagacgctaagtcaaataaacaacggaacctggtacaaaaaggagtatcaccaagccacctatcat 11196775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 35488082 - 35488131
Alignment:
Q  39 tacactcctctagcaaatcctcctcccacacccttaacctacgccgccaa 88  Q
    ||||||||||||||||| ||||||||||| |||  |||||||||||||||    
T  35488082 tacactcctctagcaaagcctcctcccacgcccacaacctacgccgccaa 35488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 8066121 - 8066072
Alignment:
Q  39 tacactcctctagcaaatcctcctcccacacccttaacctacgccgccaa 88  Q
    ||||||||||||||| | ||||||||||| |||  |||||||||||||||    
T  8066121 tacactcctctagcatagcctcctcccacgcccacaacctacgccgccaa 8066072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 14686820 - 14686712
Alignment:
Q  104 tcaaccatatcagctaccgtgctcaacttattagacactaaattaaatagacgacggaacctgatacaaaaaggaacatcactcagccacctgtcatacc 203  Q
    |||||||||||||| || |||||||| ||||||||  |||||| ||| | ||||||||| ||  ||||||||||   |||||  ||||||||||||||||    
T  14686820 tcaaccatatcagccacagtgctcaatttattagatgctaaatcaaacaaacgacggaatctagtacaaaaaggtgtatcaccaagccacctgtcatacc 14686721  T
Q  204 aaaactaag 212  Q
    |||| ||||    
T  14686720 aaaagtaag 14686712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 23065944 - 23065893
Alignment:
Q  37 cttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaa 88  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||||||||||    
T  23065944 cttacactcctctagcaaatcctcctcccacgcccacaaccgacgccgccaa 23065893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14844070 - 14844000
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| |||||||||| |||  || ||||||| |||| ||| ||||||||||||||||    
T  14844070 aatatcagactgcaaaacaacaccattaagtaattgcctacactcttctaccaactcctcctcccacaccc 14844000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 9565610 - 9565661
Alignment:
Q  37 cttacactcctctagcaaatcctcctcccacacccttaacctacgccgccaa 88  Q
    ||||||||||||||||||| ||||||||||| |||  |||||||||| ||||    
T  9565610 cttacactcctctagcaaagcctcctcccacgcccacaacctacgcctccaa 9565661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 14686932 - 14686870
Alignment:
Q  10 ctgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccct 72  Q
    |||||||| ||||||||||||||||| | |||||||||||| ||  || ||||||||| ||||    
T  14686932 ctgcaaaatgacaccattaattaaaaccctacactcctctaacagctcatcctcccacgccct 14686870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 26855929 - 26855991
Alignment:
Q  10 ctgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccct 72  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||  |||||||||||| ||||    
T  26855929 ctgcaaaatgacaccattaattaaaagcctacactcctctaacagctcctcctcccacgccct 26855991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 476420 - 476490
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| |||||||||| |||  || |||||||||||| ||| ||||||||||||||||    
T  476420 aatatcagactgcaaaacaacaccattaagtaattgcctacactcctctaccaactcctcctcccacaccc 476490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7875 - 7945
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||||||||| ||| |||||| |||  || |||||||||||| ||| ||||||||||||||||    
T  7875 aatatcagactgcaaaacaacaacattaagtaattgcctacactcctctaccaactcctcctcccacaccc 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34542 - 34472
Alignment:
Q  1 aataacagactgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacaccc 71  Q
    |||| ||||||| ||||| |||||||||| |||  || |||||||||||| ||| ||||||||||||||||    
T  34542 aatatcagactgtaaaacaacaccattaagtaattgcctacactcctctaccaactcctcctcccacaccc 34472  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 9510998 - 9511066
Alignment:
Q  10 ctgcaaaacgacaccattaattaaaagcttacactcctctagcaaatcctcctcccacacccttaacct 78  Q
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T  9510998 ctgcaaaacaacaccattaagcaattgcctacactcctctaacatctcctcctcccacaccctcaacct 9511066  T

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